mRNA_E-siliculosus-1a_F_contig1502.2926.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1502.2926.1
Unique NamemRNA_E-siliculosus-1a_F_contig1502.2926.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1502.2926.1 vs. uniprot
Match: D7FYD0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYD0_ECTSI)

HSP 1 Score: 558 bits (1439), Expect = 2.510e-194
Identity = 411/422 (97.39%), Postives = 416/422 (98.58%), Query Frame = 2 
Query:  137 MANTRRKPLRGAALRVLDLVSAASTPKEWAAWLKVPLEIAVRTGDRDLASMLVRGGAEAGTAVNEAIACGDTEVMNLLLDNGASVSATDAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREWYDGAHRSXXXXXXXXXXXXXXXXXXXXXXXVNAGDNLFVPALHLAVAFNKVKAVKVLLEAGANIQGHSFSRSTPLHLASFKQPSVESAVXXXXXXXXXXXXXXXXXXXXXXAASYAGRQGSAELVDLLLRRGADEAIPDRNGQQPADRVGHCMELGDVVLGHEVILVHELLANAPADRAWRRRGLLVLCRAWLRRSRLRQEDGGDTRGGLSRRTRSRAKLARSDAVGAGCRSGTPEGGPGDEWRSASKRVVELEEEGIFRSVVGFL 1402
            MANTRRKPLRGAALRVLDLVSAASTP+EWAAWLKVPLEIAVRTGDRDLASMLVRGGAEAGTAVNEAIACGDTEVM+LLLDNGASVSATDAE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX REWYDGAHRSXXXXXXXXXXXXXXXXXXXXXXXVNAGDNLFVPALHLAVAFNKVKAVKVLLEAGA+IQGHSFSRSTPLHLASFKQPSVESAVXXXXXXXXXXXXXXXXXXXXXXAASYAGRQGSAELVDLLLRRGADE  PDRNGQQPADRVGHCMELGDV+LGHEV+LVHELLANAPADRAWRRRGLLVLCRAWLRRSRLRQEDGGDTRGGLSRRTRSRAKLARSDAVGAGCR GTPEGG GDEWRSASKRVVELEEEGIFRSVVGFL
Sbjct:    1 MANTRRKPLRGAALRVLDLVSAASTPEEWAAWLKVPLEIAVRTGDRDLASMLVRGGAEAGTAVNEAIACGDTEVMSLLLDNGASVSATDAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLREWYDGAHRSXXXXXXXXXXXXXXXXXXXXXXXVNAGDNLFVPALHLAVAFNKVKAVKVLLEAGADIQGHSFSRSTPLHLASFKQPSVESAVXXXXXXXXXXXXXXXXXXXXXXAASYAGRQGSAELVDLLLRRGADETTPDRNGQQPADRVGHCMELGDVLLGHEVVLVHELLANAPADRAWRRRGLLVLCRAWLRRSRLRQEDGGDTRGGLSRRTRSRAKLARSDAVGAGCRRGTPEGGTGDEWRSASKRVVELEEEGIFRSVVGFL 422
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BLAST of mRNA_E-siliculosus-1a_F_contig1502.2926.1 vs. uniprot
Match: A0A6H5KNN1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNN1_9PHAE)

HSP 1 Score: 200 bits (508), Expect = 3.150e-58
Identity = 102/106 (96.23%), Postives = 104/106 (98.11%), Query Frame = 2 
Query: 1085 GHEVILVHELLANAPADRAWRRRGLLVLCRAWLRRSRLRQEDGGDTRGGLSRRTRSRAKLARSDAVGAGCRSGTPEGGPGDEWRSASKRVVELEEEGIFRSVVGFL 1402
            GHEV+LVHELLANAPADRAWRRRGLLVLCRAWLRRSRLRQEDGGDTRGGLSRRTRSRAKLARSDAVGAGCRSGTPEGG GDEWRSAS+RVVELEE GIFRSVVGFL
Sbjct:   48 GHEVVLVHELLANAPADRAWRRRGLLVLCRAWLRRSRLRQEDGGDTRGGLSRRTRSRAKLARSDAVGAGCRSGTPEGGTGDEWRSASRRVVELEE-GIFRSVVGFL 152
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BLAST of mRNA_E-siliculosus-1a_F_contig1502.2926.1 vs. uniprot
Match: D7FKL4_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKL4_ECTSI)

HSP 1 Score: 132 bits (333), Expect = 1.840e-30
Identity = 181/425 (42.59%), Postives = 220/425 (51.76%), Query Frame = 2 
Query:  137 MANT-RRKPLRGAALRVLDLVSAASTPKEWAAWLKVPLEIAVRTGDRDLASMLVRGGAEAGTAVNEAIACGDTEVMNLLLDNGASVSATDAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREWYDGAHRSXXXXXXXXXXXXXXXXXXXXXXXVNAGDNLFVPALHLAVAFNKVKAVKVLLEAGANIQGHSFSRSTPLHLASFKQPSVESAVXXXXXXXXXXXXXXXXXXXXXX--AASYAGRQGSAELVDLLLRRGADEAIPDRNGQQPADRVGHCMELGDVVLGHEVILVHELLANAPADRAWRRRGLLVLCRAWLRRSRLRQEDGGDTRGGLSRRTRSRAKLARSDAVGAGCRSGTPEGGPGDEWRSASKRVVELEEEGIFRSVVGFL 1402
            MAN   R  LRG   R+ DL +   TPK+WA  ++  LE A   G   L   LV  GAE GTAV+ A+  G  ++   LL++GAS SA+D E     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     R  Y     S                       V+A +   V ALH A A NKV+A+ VLL AGAN +  S S  T LH+A+  +   E+A                          A+ AG+QG  E+VDLLLR GADE     NG + AD +G  +   D +   E   V +LLANAPADRAWRRR  LVLCRA   + +L  +                 ++AR +A                       RV+ L EEGIFR++V F+
Sbjct:    1 MANECARGALRGEEERIFDLAAETCTPKQWAGLMQPFLEHAAGRGHEHLTRKLVEAGAEIGTAVHAAVRGGHCDITEFLLESGASASASDEEGLTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADINRR--YGDREISALDIGAGEGHVDFIRTLIEHGADVDATNYGGVAALHHATANNKVEAMDVLLRAGANARSMSESGHTVLHMAAITRTRTEAATLAVLLKHGADVNAQTVGGTSVLEYVATRAGKQGIVEVVDLLLRWGADETHVAGNGMRAADAIGMKVPEEDRI-PEEFEGVRKLLANAPADRAWRRRCSLVLCRARPDKMQLSSD-----------------RIARLEA-----------------------RVLGLVEEGIFRTIVRFI 382
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BLAST of mRNA_E-siliculosus-1a_F_contig1502.2926.1 vs. uniprot
Match: A0A6H5KXK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXK5_9PHAE)

HSP 1 Score: 119 bits (299), Expect = 9.630e-26
Identity = 71/155 (45.81%), Postives = 94/155 (60.65%), Query Frame = 2 
Query:  938 AASYAGRQGSAELVDLLLRRGADEAIPDRNGQQPADRVGHCMELGDVVLGHEVILVHELLANAPADRAWRRRGLLVLCRAWLRRSRLRQEDGGDTRGGLSRRTRSRAKLARSDAVGAGCRSGTPEGGPGDEWRSASKRVVELEEEGIFRSVVGFL 1402
            A   AGRQG+AE+V+ LLR GADE I +  G +  D +G  +E  D  L  +V  V ELLANAPADRAWRRRG L++CRA   R   R+   G     ++RRTRSRAK+AR+  +       T +   G  W     +V+ L+EEGIFR++V +L
Sbjct:  250 AGRQAGRQGAAEVVNSLLRAGADETIANVQGNKAVDMIGEDVEEEDR-LTEDVERVRELLANAPADRAWRRRGYLIMCRAQPDRVPERRMTSGTHYTNVARRTRSRAKMARARGIAG---ESTVDESTGGNWAVVVSKVISLQEEGIFRTIVEYL 400
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BLAST of mRNA_E-siliculosus-1a_F_contig1502.2926.1 vs. uniprot
Match: A0A6H5JHY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY9_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 7.520e-22
Identity = 90/238 (37.82%), Postives = 121/238 (50.84%), Query Frame = 2 
Query:  695 VNAGDNLFVPALHLAVAFNKVKAVKVLLEAGANIQGHSFSRSTPLHLASFKQPSVESAVXXXXXXXXXXXXXXXXXXXXXXAASYAGRQGSAELVDLLLRRGADEAIPDRNGQQPADRVGHCMELGDVVLGHEVILVHELLANAPADRAWRRRGLLVLCRAWLRRSRLR--QEDGGDTRGGLSRRTRSRAKLARSDAVGAGCRSGTPEGGPGDEWRSASKRVVELEEEGIFRSVVGFL 1402
            VNA  N  + AL +A AF+K  A+ VL EAGANI+  + + STPLH+AS ++  + + +                       A+ AG  G+AE+VDLLLRRGADE     NG   AD V    E  D  L  +V  V +LLA APADRAWRRRG L+L RA     R++           G+++RTRS  + +R++   AG  S     G G +  S       L    IF  +VG+L
Sbjct:  550 VNAKVNNGITALRVASAFDKAPAIDVLTEAGANIEAQA-NGSTPLHVAS-QEGRLAAGIALLRHGASVGKKNAAAQTPLHLVAAKAGSPGTAEMVDLLLRRGADETAVSENGHTAADMVVLKTEESDS-LAEDVDRVRKLLARAPADRAWRRRGFLILSRAHYPGGRVQFGHRTSQAPAAGVAKRTRSSEEPSRAEIDWAGVVSMLM--GDGVDPISLMGDGANL----IFEKIVGYL 778
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BLAST of mRNA_E-siliculosus-1a_F_contig1502.2926.1 vs. uniprot
Match: D7G137_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G137_ECTSI)

HSP 1 Score: 107 bits (266), Expect = 1.850e-21
Identity = 193/422 (45.73%), Postives = 227/422 (53.79%), Query Frame = 2 
Query:  152 RKPLRGAALRVLDLVSAASTPKEWAAWLKVPLEIAVRTGDRDLASMLVRGGAE-AGTAVNEAIACGDTEVMNLLLDNGASVSATDAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREWYDGAHRSXXXXXXXXXXXXXXXXXXXXXXXVNAGDNLFVPALHLAVAFNKVKAVKVLLEAGANIQGHSFSRSTPLHLASFKQPSVESAVXXXXXXXXXXXXXXXXXXXXXXAASYAGRQGSAELVDLLLRRGADEAIPDRNGQQPADRVGH----CMELGDVVLGHEVILVHELLANAPADRAWRRRGLLVLCRAWLRRSRLRQEDGGDTRGGLSRRTRSRAKLARSDAVGAGCRSGTPEGGPGDEWRSASKRVVELEEEGIFRSVVGFL 1402
            ++ L+G   RVLDL+     P E + WL  PLE AV  GD  LA  LV+ GA+  G A++EA+  G   +  LLL+NGASV   + +    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   R   +    S                       VN     F  ALH A   N+  A+ VL+ AGA+IQ  + S S PL              XXXXXXXXXXXXXXXXXXXXXX A    R+GS ++V LLLR GADE I  + G+  ADR+G       E GD            LL  APADRAWRRRGLLVLC A+  R +L    GGD  G +                                      RV+ LEE G+FR++V +L
Sbjct:   16 KETLKGEEERVLDLMLDTRCPHEMSEWLAAPLESAVARGDEGLAQKLVQAGAKIGGVALHEAVRRGHIAIAELLLENGASVHDDEDDYGTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTVR--LNEFDMSFLDFAASSQDVEILRMLIDHGMEVNLAA-AFGTALHWAAKANRANAIDVLVGAGADIQARNMSGSRPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKVGQRRGSVQVVGLLLRWGADETIVCKQGKTAADRIGTRRFPSTEPGDDERARS------LLTRAPADRAWRRRGLLVLCHAYPDRLQL----GGDLAGLVD-------------------------------------RVLGLEEVGVFRTIVLYL 387
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BLAST of mRNA_E-siliculosus-1a_F_contig1502.2926.1 vs. uniprot
Match: A0A6H5KNU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU3_9PHAE)

HSP 1 Score: 102 bits (253), Expect = 2.120e-19
Identity = 66/161 (40.99%), Postives = 89/161 (55.28%), Query Frame = 2 
Query:  725 ALHLAVAFNKVKAVKVLLEAGANIQGHSFSRSTPLHLASFKQPSVESAVXXXXXXXXXXXXXXXXXXXXXXAASYAGRQGSAELVDLLLRRGADEAIPDRNGQQPADRVGHCMELGDVVLGHEVI-LVHELLANAPADRAWRRRGLLVLCRA-WLRRSRLR 1201
            +LH+A   N+V A+ VL+EAGA+++       TP  L +      E+A+                      AA  AGRQG   +VD+LLR GADE   + +G+  A+ VGH +E     L  + +  V +LL NAPADRAWRRRGLLVLCRA W++  RLR
Sbjct:  191 SLHVAALNNRVAAIDVLVEAGAHVEVEDDDDCTPF-LDACSNHCHEAALALFKHGANIEARDMRGETPLIIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDLERVRDLLENAPADRAWRRRGLLVLCRAFWIKSRRLR 350
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BLAST of mRNA_E-siliculosus-1a_F_contig1502.2926.1 vs. uniprot
Match: D8LQN0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQN0_ECTSI)

HSP 1 Score: 100 bits (249), Expect = 8.350e-19
Identity = 85/245 (34.69%), Postives = 120/245 (48.98%), Query Frame = 2 
Query:  695 VNAGDNLFVPALHLAVAFN-----KVKAVKVLLEAGA--NIQGHSFSRSTPLHLASFKQPSVESAVXXXXXXXXXXXXXXXXXXXXXXAASYAGRQGSAELVDLLLRRGADEAIPDRNGQQPADRVG--HCMELGDVVLGHEVILVHELLANAPADRAWRRRGLLVLCRAWLRRSRLRQEDGGDTRGGLSRRTRSRAKLARSDAVGAGCRSGTPEGGPGDEWRSASKRVVELEEEGIFRSVVGFL 1402
            V+  ++L   ALH   +F+     K  AV+VLL AGA  N++G + S +TPLHLA  +  +    +                       A    R     +V+LLLR GADE +P+ +G  PAD VG     +L D     +   +H +LA APADR+WRRRG LVL R+    +R+   +G  +   +SR   + AK+AR    G+       E     + R    R+V LE EG+FR VVGFL
Sbjct:  272 VDTANDLGWAALHYVASFDETVRDKGDAVRVLLGAGADVNVKGTNDSCATPLHLAVNRWMTSTGTICALLEGGANINARTAGDDTPLHIACTRLR---GSVVELLLRWGADEKLPNNDGDTPADVVGVLEQNDLDDEEREADNQRIHRMLARAPADRSWRRRGWLVLSRSCP--TRVHIANGSSSSSSISRINGNSAKVARVSGQGSSRDDEETEDQMMVDLRDLVGRLVGLEAEGLFRLVVGFL 511
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BLAST of mRNA_E-siliculosus-1a_F_contig1502.2926.1 vs. uniprot
Match: D7G981_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G981_ECTSI)

HSP 1 Score: 99.4 bits (246), Expect = 8.420e-19
Identity = 68/152 (44.74%), Postives = 84/152 (55.26%), Query Frame = 2 
Query:  950 AGRQGSAELVDLLLRRGADEAIPDRNGQQPADRVGHCMELGDVVLGHEVILVHELLANAPADRAWRRRGLLVLCRAWLRRSRLRQEDGGDTRGGLSRRTRSRAKLARSDAVGAGCRSGTP-EGGPGDEWRSASKRVVELEEEGIFRSVVGFL 1402
            AG +G+ E+VDLLLR  ADE   D  G  P + VG CM      +   V  V +LL  AP DRAWRRRG+LVLCRA   R  LRQ         + R TRSR KL   + V  G   G   +G    EW +   RV+ L+E GIFR++VG+L
Sbjct:  250 AGDEGAVEVVDLLLRWNADETDDDAYGHTPGNIVG-CMTPETDSMFVNVQRVWKLLQYAPQDRAWRRRGMLVLCRAHPERLGLRQNASHVQESTVLRVTRSRTKLVEREQVAGGSGEGAAADGRTAREWSNMVYRVLGLDE-GIFRTIVGYL 399
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BLAST of mRNA_E-siliculosus-1a_F_contig1502.2926.1 vs. uniprot
Match: D7G6X8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6X8_ECTSI)

HSP 1 Score: 99.4 bits (246), Expect = 1.300e-18
Identity = 72/189 (38.10%), Postives = 95/189 (50.26%), Query Frame = 2 
Query:  725 ALHLAVAFNKVKAVKVLLEAGANIQGHSFSRSTPLHLASFKQPSVESAVXXXXXXXXXXXXXXXXXXXXXXAASYAGRQGSAELVDLLLRRGADEAIPDRNGQQPADRVGHCMELGDVVLG-HEVILVHELLANAPADRAWRRRGLLVLCRA-WLRRSRLRQEDGGDTRGGLSRRTRSRAKLARSDAVG 1285
            +LH+A   N+V A+ VL+EAGA+++       TP   A       E+A+                      AA  AGRQG   +VD+LLR GADE   + +G+  A+ VGH +E     L   +V  V +LL NAP DRAWRRRG LVLCRA W++  RLR      +  G   R RS +  AR    G
Sbjct:  142 SLHVAALNNRVAAIDVLVEAGAHVEVEDDDDCTPFLDACINHCH-EAALALYKHGSNIEARDIRGETPLIIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDVERVRDLLENAPVDRAWRRRGFLVLCRAFWIKARRLRAASSNASSNGP--RVRSLSTGARISGAG 327
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1502.2926.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYD0_ECTSI2.510e-19497.39Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=28... [more]
A0A6H5KNN1_9PHAE3.150e-5896.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FKL4_ECTSI1.840e-3042.59Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=28... [more]
A0A6H5KXK5_9PHAE9.630e-2645.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHY9_9PHAE7.520e-2237.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G137_ECTSI1.850e-2145.73Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5KNU3_9PHAE2.120e-1940.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQN0_ECTSI8.350e-1934.69Ankyrin repeat protein n=2 Tax=Ectocarpus siliculo... [more]
D7G981_ECTSI8.420e-1944.74Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si... [more]
D7G6X8_ECTSI1.300e-1838.10Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1502contigE-siliculosus-1a_F_contig1502:23151..26697 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size1269
Model size1653
Exons3
Ec32 orthologEc-09_001280.1
Ec32 ortholog descriptionAnkyrin-repeat protein
Hectar predicted targeting categoryother localisation
BRITEko00000,ko04131
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.G
EggNOG OGsCOG0666@1,KOG4177@2759
EggNOG free text desc.response to abiotic stimulus
GOsGO:0001508,GO:0002027,GO:0002262,GO:0002376,GO:0002520,GO:0003008,GO:0003012,GO:0003013,GO:0003015,GO:0003205,GO:0003230,GO:0003279,GO:0003283,GO:0003674,GO:0005198,GO:0005200,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005829,GO:0005856,GO:0005886,GO:0005911,GO:0005938,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006873,GO:0006874,GO:0006875,GO:0006887,GO:0006888,GO:0006928,GO:0006936,GO:0006937,GO:0006941,GO:0006942,GO:0006996,GO:0007009,GO:0007010,GO:0007154,GO:0007163,GO:0007165,GO:0007267,GO:0007275,GO:0007507,GO:0008015,GO:0008016,GO:0008092,GO:0008093,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009893,GO:0009987,GO:0010256,GO:0010468,GO:0010522,GO:0010604,GO:0010628,GO:0010638,GO:0010646,GO:0010880,GO:0010881,GO:0010882,GO:0010959,GO:0012505,GO:0014704,GO:0014731,GO:0015672,GO:0016020,GO:0016043,GO:0016192,GO:0016323,GO:0016528,GO:0016529,GO:0018130,GO:0019222,GO:0019438,GO:0019722,GO:0019725,GO:0019899,GO:0019900,GO:0019901,GO:0019932,GO:0022898,GO:0023051,GO:0023052,GO:0030001,GO:0030003,GO:0030011,GO:0030016,GO:0030017,GO:0030018,GO:0030029,GO:0030048,GO:0030054,GO:0030097,GO:0030099,GO:0030154,GO:0030218,GO:0030315,GO:0030424,GO:0030507,GO:0030673,GO:0030674,GO:0030863,GO:0031252,GO:0031253,GO:0031256,GO:0031430,GO:0031647,GO:0031672,GO:0031674,GO:0032409,GO:0032411,GO:0032412,GO:0032414,GO:0032501,GO:0032502,GO:0032589,GO:0032879,GO:0032940,GO:0032970,GO:0033013,GO:0033014,GO:0033036,GO:0033043,GO:0033267,GO:0033292,GO:0033365,GO:0034101,GO:0034394,GO:0034613,GO:0034641,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0035088,GO:0035090,GO:0035556,GO:0035637,GO:0036309,GO:0036371,GO:0042383,GO:0042391,GO:0042592,GO:0042692,GO:0042995,GO:0043005,GO:0043034,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043266,GO:0043268,GO:0043269,GO:0043270,GO:0043292,GO:0044057,GO:0044093,GO:0044237,GO:0044249,GO:0044271,GO:0044291,GO:0044304,GO:0044325,GO:0044422,GO:0044424,GO:0044425,GO:0044444,GO:0044448,GO:0044449,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0045197,GO:0045199,GO:0045202,GO:0045211,GO:0046483,GO:0046903,GO:0046907,GO:0048193,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048534,GO:0048731,GO:0048821,GO:0048856,GO:0048869,GO:0048872,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050821,GO:0050896,GO:0051049,GO:0051050,GO:0051117,GO:0051128,GO:0051130,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0051239,GO:0051270,GO:0051279,GO:0051282,GO:0051641,GO:0051649,GO:0051716,GO:0051899,GO:0051924,GO:0051928,GO:0055001,GO:0055065,GO:0055072,GO:0055074,GO:0055076,GO:0055080,GO:0055082,GO:0055117,GO:0060047,GO:0060048,GO:0060090,GO:0060255,GO:0060306,GO:0060307,GO:0060341,GO:0061024,GO:0061061,GO:0061245,GO:0061337,GO:0061515,GO:0065007,GO:0065008,GO:0065009,GO:0070252,GO:0070296,GO:0070727,GO:0070838,GO:0070972,GO:0071704,GO:0071840,GO:0071944,GO:0072359,GO:0072503,GO:0072507,GO:0072511,GO:0072657,GO:0072659,GO:0086001,GO:0086002,GO:0086003,GO:0086004,GO:0086005,GO:0086010,GO:0086012,GO:0086014,GO:0086015,GO:0086018,GO:0086019,GO:0086026,GO:0086046,GO:0086065,GO:0086066,GO:0086070,GO:0086091,GO:0090257,GO:0097060,GO:0097458,GO:0098590,GO:0098771,GO:0098794,GO:0098900,GO:0098901,GO:0098907,GO:0098910,GO:0099080,GO:0099081,GO:0099512,GO:0099568,GO:0099623,GO:0120025,GO:0120038,GO:1901016,GO:1901018,GO:1901019,GO:1901021,GO:1901360,GO:1901362,GO:1901379,GO:1901381,GO:1901564,GO:1901566,GO:1901576,GO:1903115,GO:1903169,GO:1903522,GO:1903779,GO:1904062,GO:1904064,GO:1904427,GO:1990778,GO:2001257,GO:2001259
KEGG koko:K21440
Seed eggNOG ortholog2880.D7FYD0
Seed ortholog evalue2.4e-157
Seed ortholog score562.0
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1502.2926.1prot_E-siliculosus-1a_F_contig1502.2926.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1502 23949..25217 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928013.8564641-UTR-E-siliculosus-1a_F_contig1502:23150..232561622928013.8564641-UTR-E-siliculosus-1a_F_contig1502:23150..23256Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1502 23151..23256 +
1696318772.6321385-UTR-E-siliculosus-1a_F_contig1502:23150..232561696318772.6321385-UTR-E-siliculosus-1a_F_contig1502:23150..23256Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1502 23151..23256 +
1622928013.8838964-UTR-E-siliculosus-1a_F_contig1502:23918..239481622928013.8838964-UTR-E-siliculosus-1a_F_contig1502:23918..23948Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1502 23919..23948 +
1696318772.6434042-UTR-E-siliculosus-1a_F_contig1502:23918..239481696318772.6434042-UTR-E-siliculosus-1a_F_contig1502:23918..23948Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1502 23919..23948 +
1622928013.9336767-UTR-E-siliculosus-1a_F_contig1502:25217..252231622928013.9336767-UTR-E-siliculosus-1a_F_contig1502:25217..25223Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1502 25218..25223 +
1696318772.6606796-UTR-E-siliculosus-1a_F_contig1502:25217..252231696318772.6606796-UTR-E-siliculosus-1a_F_contig1502:25217..25223Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1502 25218..25223 +
1622928013.9477525-UTR-E-siliculosus-1a_F_contig1502:26455..266971622928013.9477525-UTR-E-siliculosus-1a_F_contig1502:26455..26697Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1502 26456..26697 +
1696318772.6696732-UTR-E-siliculosus-1a_F_contig1502:26455..266971696318772.6696732-UTR-E-siliculosus-1a_F_contig1502:26455..26697Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1502 26456..26697 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928013.8966708-CDS-E-siliculosus-1a_F_contig1502:23948..252171622928013.8966708-CDS-E-siliculosus-1a_F_contig1502:23948..25217Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1502 23949..25217 +
1696318772.6520915-CDS-E-siliculosus-1a_F_contig1502:23948..252171696318772.6520915-CDS-E-siliculosus-1a_F_contig1502:23948..25217Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1502 23949..25217 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1502.2926.1

>prot_E-siliculosus-1a_F_contig1502.2926.1 ID=prot_E-siliculosus-1a_F_contig1502.2926.1|Name=mRNA_E-siliculosus-1a_F_contig1502.2926.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=423bp
MANTRRKPLRGAALRVLDLVSAASTPKEWAAWLKVPLEIAVRTGDRDLAS
MLVRGGAEAGTAVNEAIACGDTEVMNLLLDNGASVSATDAEGSTPLHIAA
RTGKAEIVRSLLLKGAEPDAQDCHDYTPLYIAAMLGHTAAARALLAAGAD
MDLREWYDGAHRSPLELAASGGHVGVLRAMIHHGVDVNAGDNLFVPALHL
AVAFNKVKAVKVLLEAGANIQGHSFSRSTPLHLASFKQPSVESAVILLDH
GADVNAQNDDDKTPLHFAASYAGRQGSAELVDLLLRRGADEAIPDRNGQQ
PADRVGHCMELGDVVLGHEVILVHELLANAPADRAWRRRGLLVLCRAWLR
RSRLRQEDGGDTRGGLSRRTRSRAKLARSDAVGAGCRSGTPEGGPGDEWR
SASKRVVELEEEGIFRSVVGFL*
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mRNA from alignment at E-siliculosus-1a_F_contig1502:23151..26697+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1502.2926.1 ID=mRNA_E-siliculosus-1a_F_contig1502.2926.1|Name=mRNA_E-siliculosus-1a_F_contig1502.2926.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=3547bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1502:23151..26697+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GGACAGCGAGTGGGAAGAGACGGAGGGCAGAGGAATGGTAACAATCGTGC
GAGACACAAGCCGGGTTCAGAAACGGCTAGGTTAGCAGGATACAACATAT
ACACTGGTGAGCGCTCCTTCCGTCCAGCAGCAGCAGCAACAGCATCAGCA
GCAGCAGTACATACGTACCACAGCCGCACCTTGTCCGCAGCAGTAAGAAC
ACATGTCCAGCTCTGTCGTTCGCATCCTTCGCGGGGCGTACTTTTGAAGG
CGGTATCCACAGCAGCCATGCATATCGGAGACAAAGGGCTATGAGATACA
GCTATAGCTTGTGTGATGCGTGCCATTGGATGCTACGATGTGTGAGTGTG
TTTCAGGGAACCTCAGGGAACACGCGCACCTGATAGCTCAGCGGCTACTG
TAGGCGAAACTGCTGTAGGTACCATATACATAGTCTAGACCCGAGGACGA
GATCGTGGGGAACGATCGTTGGCCTATCGGTGCTTCACCGTGCGTCGAGA
TTCCCGCGTCAAAATTCAAGCTAGCCACAACCGCGGTGTTACAGGTCTTA
CACATGTGGTATGTAATCAAGTCAAACCGCTGAGTACAAGTCTGCTACCG
TGTAGTGTACCAGCAAAAAATACGCACCTCTCTTCGGTGAGCGGCATGAT
CACATGACAGCGTCCGAATACTGCTTTGTGCTTTGCAGGACGTGCACCCT
CACTCAATTCACATGTGGATTCTACACGATGCCCTTTTTTTTATGGACTT
TTCTCCTTCTCCTCCCAGTGCGTCGGTGGGGTCTACTGTCGTGGTCGGAT
GGCAAACACGCGGCGGAAACCCCTGCGAGGGGCGGCCCTGCGAGTGCTAG
ACCTTGTGTCTGCAGCCTCCACGCCCAAGGAGTGGGCAGCGTGGCTCAAA
GTACCGCTGGAGATCGCTGTTAGGACGGGGGATCGAGACCTTGCATCAAT
GCTGGTGCGGGGAGGTGCTGAGGCTGGGACCGCAGTGAACGAGGCCATCG
CCTGCGGTGACACGGAGGTGATGAACCTGTTGCTGGACAACGGAGCGTCG
GTCAGCGCCACGGATGCCGAAGGATCTACCCCCCTTCACATCGCCGCTCG
AACCGGCAAGGCGGAGATTGTGAGGTCGTTGCTGCTCAAAGGGGCCGAAC
CAGACGCGCAAGACTGCCACGACTACACGCCGTTGTACATCGCGGCTATG
CTTGGACACACTGCGGCGGCGCGAGCGCTGTTGGCAGCGGGTGCTGATAT
GGACCTCCGGGAGTGGTACGATGGGGCTCACAGGTCGCCGTTAGAACTCG
CCGCTTCGGGAGGGCACGTAGGCGTCTTGAGGGCGATGATCCACCACGGG
GTCGACGTCAACGCCGGCGACAACTTGTTCGTGCCGGCCCTACACCTGGC
GGTGGCTTTCAACAAGGTGAAGGCCGTCAAGGTGCTCCTCGAGGCGGGGG
CCAACATCCAAGGACACAGCTTCAGCCGAAGCACGCCCCTCCACCTCGCT
TCCTTCAAGCAGCCCAGCGTCGAGTCTGCGGTGATCCTGTTGGACCATGG
CGCGGACGTGAACGCGCAGAACGATGACGACAAGACGCCCCTGCACTTCG
CCGCCAGCTACGCCGGGCGGCAAGGTAGCGCGGAGCTGGTGGACCTGCTG
CTGAGGCGGGGTGCGGACGAGGCCATCCCCGACCGCAACGGCCAGCAGCC
CGCCGACAGAGTTGGGCACTGCATGGAACTCGGCGACGTAGTGCTAGGAC
ACGAGGTTATTCTCGTGCACGAGCTGTTGGCGAACGCCCCGGCAGATAGG
GCGTGGCGCCGCCGGGGCTTGCTGGTCTTGTGCCGTGCTTGGCTCCGGAG
GTCGCGGCTGAGGCAAGAGGACGGCGGCGACACGCGCGGTGGTTTGTCTC
GGAGGACTCGCAGCCGCGCGAAGCTGGCGAGATCAGACGCGGTCGGCGCG
GGATGTCGGAGCGGCACCCCGGAAGGTGGTCCCGGTGACGAGTGGAGAAG
TGCCTCTAAGCGAGTGGTGGAGCTGGAGGAGGAGGGCATTTTCAGATCAG
TCGTGGGATTCCTGTGAAGAAAAGTGAGCTGACATGTGTCAAATTAGACA
ACACGCGTGTGTTGCGAATGCCATACACGGGTTCCATTTTCCCGCACTAT
ATGATTTGGTTGCCTTCTTCCCGTAGTAGCGAGAAGAGTCTCAACTCCCG
AGAAACCAAAGAACAGGGCCTGAGTGCAATGACCGGTACCTACAGCAGTG
TAGCTCTTTGTGGCGTCGTAAGCTCCTTAGCTATTGATCACCAGTGATGG
GAAGTGCTGCCAAACGTTGAAGCAAGGGGGTTCGTCGAGCAAGTCAGTAC
CGCAAAATAGCACACGAAAATCGTCGCCCTGTTCCCGCGCATGCCACAAG
GCACACAGCGCTTCTGTGTACCAACACCCTTAGCACATGGTTCCTCTCAT
TCACCGTTCGCAATATTGTGGTGGCCCGCTGTTTTCCCGTAAAATAGTCC
AGTACTTCGCTAGCCCTTGTTTTTTTGGGGGGGGGTTGGTGGAGATTCTA
ATTGCGATTGTCTTGCTTATGATCCTCGTATCGCCGTCATGGGCGGGCGG
CATCTGTGTTTAGGGTTGATAATCCACAAGCTCTTCTTCGTGTGCCGCTC
TCTCCGCCAAACACCACACCGCGTGACTACGGTGTCGCAGGGTCTACAAT
AGTCCGCGATGAAAAGGGGCTCGAAAGAGGACGATAGTGGCACTTTCTTG
CAACCCACTTTTCCCATTATGTGCCTGGGTTGTACTAGCGTGTCCTGTCC
TGCTGCTGCCAACCTGTCTCACTTGCCTGTATGCGGCTCTCGGCTGGCCT
CTGCGCGGGACAAGGTTTTCAAGAAAGAGTGCTATAGACGCCAATTTCAG
TCCACGTCAGAAAAGAAAAGCACCCCACGTGTCCAGCCTGGGTCTCGAAC
GCGCGCCTAACTTGGTGTAGACGCAGAATCAAACCATTATTAGACTCGTC
AGCGCTGACTCTTGAATTCATCTTCTAACAGGGCATCGGAGCGCGTGTCG
CGTGCCTTCGCCACAAACGACCGACCCCGTGGGAACAAAGATGATGCAGC
AACCAAGCAATTGTACCGTTTCAAGCGCGCGATGGTCTTGGGCCATGGGG
CACCCCCTCCCGTGTACCTATCCATAGGTTGTCATTTTCCGGTAAGCGTA
GCGTGTGGAGGCAAAAACTACCCCGTCCTTTCACCGAGCAAACAATCACT
GAGGCCGCCTTACCACCCTCTGCCGCCGACCCATCTGCTCTTCGGGCACA
TACAGGATGACCGAGAACATTTGAAATGTCAGCGAAATCGTAGTGGCAAG
CCGGCTCTGGAGGTATGGCGAACGAGGGAACGTTTGCAGTGATCTGGGAA
GCGTACCGCTGCCCGGGAGTCTTCCTGAGGGGCTGCTTCGTTCCGGGGTG
GATTTAGGGCATACTGCTGTGCCTGGCGTTGTTTCCAGGCGCAACACGTC
GTGGATTGTCGACCGAGTCGCACACGGAGTGTTCCGAAGGACCCGCA
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1502:23151..26697+

>mRNA_E-siliculosus-1a_F_contig1502.2926.1 ID=mRNA_E-siliculosus-1a_F_contig1502.2926.1|Name=mRNA_E-siliculosus-1a_F_contig1502.2926.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2538bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1502:23151..26697+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGCAAACACGCGGCGGAAACCCCTGCGAGGGGCGGCCCTGCGAGTGCT
AGACCTTGTGTCTGCAGCCTCCACGCCCAAGGAGTGGGCAGCGTGGCTCA
AAGTACCGCTGGAGATCGCTGTTAGGACGGGGGATCGAGACCTTGCATCA
ATGCTGGTGCGGGGAGGTGCTGAGGCTGGGACCGCAGTGAACGAGGCCAT
CGCCTGCGGTGACACGGAGGTGATGAACCTGTTGCTGGACAACGGAGCGT
CGGTCAGCGCCACGGATGCCGAAGGATCTACCCCCCTTCACATCGCCGCT
CGAACCGGCAAGGCGGAGATTGTGAGGTCGTTGCTGCTCAAAGGGGCCGA
ACCAGACGCGCAAGACTGCCACGACTACACGCCGTTGTACATCGCGGCTA
TGCTTGGACACACTGCGGCGGCGCGAGCGCTGTTGGCAGCGGGTGCTGAT
ATGGACCTCCGGGAGTGGTACGATGGGGCTCACAGGTCGCCGTTAGAACT
CGCCGCTTCGGGAGGGCACGTAGGCGTCTTGAGGGCGATGATCCACCACG
GGGTCGACGTCAACGCCGGCGACAACTTGTTCGTGCCGGCCCTACACCTG
GCGGTGGCTTTCAACAAGGTGAAGGCCGTCAAGGTGCTCCTCGAGGCGGG
GGCCAACATCCAAGGACACAGCTTCAGCCGAAGCACGCCCCTCCACCTCG
CTTCCTTCAAGCAGCCCAGCGTCGAGTCTGCGGTGATCCTGTTGGACCAT
GGCGCGGACGTGAACGCGCAGAACGATGACGACAAGACGCCCCTGCACTT
CGCCGCCAGCTACGCCGGGCGGCAAGGTAGCGCGGAGCTGGTGGACCTGC
TGCTGAGGCGGGGTGCGGACGAGGCCATCCCCGACCGCAACGGCCAGCAG
CCCGCCGACAGAGTTGGGCACTGCATGGAACTCGGCGACGTAGTGCTAGG
ACACGAGGTTATTCTCGTGCACGAGCTGTTGGCGAACGCCCCGGCAGATA
GGGCGTGGCGCCGCCGGGGCTTGCTGGTCTTGTGCCGTGCTTGGCTCCGG
AGGTCGCGGCTGAGGCAAGAGGACGGCGGCGACACGCGCGGTGGTTTGTC
TCGGAGGACTCGCAGCCGCGCGAAGCTGGCGAGATCAGACGCGGTCGGCG
CGGGATGTCGGAGCGGCACCCCGGAAGGTGGTCCCGGTGACGAGTGGAGA
AGTGCCTCTAAGCGAGTGGTGGAGCTGGAGGAGGAGGGCATTTTCAGATC
AGTCGTGGGATTCCTGTGAATGGCAAACACGCGGCGGAAACCCCTGCGAG
GGGCGGCCCTGCGAGTGCTAGACCTTGTGTCTGCAGCCTCCACGCCCAAG
GAGTGGGCAGCGTGGCTCAAAGTACCGCTGGAGATCGCTGTTAGGACGGG
GGATCGAGACCTTGCATCAATGCTGGTGCGGGGAGGTGCTGAGGCTGGGA
CCGCAGTGAACGAGGCCATCGCCTGCGGTGACACGGAGGTGATGAACCTG
TTGCTGGACAACGGAGCGTCGGTCAGCGCCACGGATGCCGAAGGATCTAC
CCCCCTTCACATCGCCGCTCGAACCGGCAAGGCGGAGATTGTGAGGTCGT
TGCTGCTCAAAGGGGCCGAACCAGACGCGCAAGACTGCCACGACTACACG
CCGTTGTACATCGCGGCTATGCTTGGACACACTGCGGCGGCGCGAGCGCT
GTTGGCAGCGGGTGCTGATATGGACCTCCGGGAGTGGTACGATGGGGCTC
ACAGGTCGCCGTTAGAACTCGCCGCTTCGGGAGGGCACGTAGGCGTCTTG
AGGGCGATGATCCACCACGGGGTCGACGTCAACGCCGGCGACAACTTGTT
CGTGCCGGCCCTACACCTGGCGGTGGCTTTCAACAAGGTGAAGGCCGTCA
AGGTGCTCCTCGAGGCGGGGGCCAACATCCAAGGACACAGCTTCAGCCGA
AGCACGCCCCTCCACCTCGCTTCCTTCAAGCAGCCCAGCGTCGAGTCTGC
GGTGATCCTGTTGGACCATGGCGCGGACGTGAACGCGCAGAACGATGACG
ACAAGACGCCCCTGCACTTCGCCGCCAGCTACGCCGGGCGGCAAGGTAGC
GCGGAGCTGGTGGACCTGCTGCTGAGGCGGGGTGCGGACGAGGCCATCCC
CGACCGCAACGGCCAGCAGCCCGCCGACAGAGTTGGGCACTGCATGGAAC
TCGGCGACGTAGTGCTAGGACACGAGGTTATTCTCGTGCACGAGCTGTTG
GCGAACGCCCCGGCAGATAGGGCGTGGCGCCGCCGGGGCTTGCTGGTCTT
GTGCCGTGCTTGGCTCCGGAGGTCGCGGCTGAGGCAAGAGGACGGCGGCG
ACACGCGCGGTGGTTTGTCTCGGAGGACTCGCAGCCGCGCGAAGCTGGCG
AGATCAGACGCGGTCGGCGCGGGATGTCGGAGCGGCACCCCGGAAGGTGG
TCCCGGTGACGAGTGGAGAAGTGCCTCTAAGCGAGTGGTGGAGCTGGAGG
AGGAGGGCATTTTCAGATCAGTCGTGGGATTCCTGTGA
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