mRNA_E-siliculosus-1a_F_contig150.2909.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
|
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig150.2909.1 vs. uniprot
Match: D7FHI8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHI8_ECTSI) HSP 1 Score: 645 bits (1665), Expect = 4.470e-226 Identity = 416/482 (86.31%), Postives = 427/482 (88.59%), Query Frame = 1
Query: 1 MKMDSSPXXXXXXXXXXXXXXXXXXXXFPPTTLQEPLQVSRMAGQPARRRRRSRRAWGAGSWRLPASCCLLGLLTASSRLLPVEGAGTVAFKNGWEIDSEAEDVVVIFAADLDGDGDLDLLAGSYSEDWVRWYKNEDGKGAFSEAMDVASDYGGAGSIDVGDLDGDGSPDVVVAFQTSFKLTWFSNLDGLGEFSVGTDIDTYEDGDHSNFVKVADLDGDGDLDVIMASKQGDRVTWYENTDGEATFALGVDISTTADGAITLALADLDGDDDLDVVSASVFSGLAWYENSNGAFSLGVSLEPADPAGGKDVVTXXXXXXXXXXXXXX-SFDGNHTAGNFPDGRILWLENDGSGSFAEGRDIGLLDSARNVVAVDLDNDGDVDLVACDGVGGSIVWYENTDGTGNFSEVIITTDVGVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVIEIEDDDGGSDATGTTAPA------DATTDPAA 1425
MKMDSSP XXXXXXXXXXXXXXXX PPTTLQEPLQVSRMAGQPARRR SRRAW AGSWRLPA+CCLLGLLTASSRLLPVEGAGTVAFKNGWEIDSEAEDVVVIFAADLDGD DLDLL GSY DWVRWY+NEDGKGAFSEAMDVAS YGGAGSIDVGDLDGDGSPDVVVAFQTSF+LTWFSNLDGLGEFSVGTDIDTYEDGDHSNFVKVADLDGDGDLDVIMASKQGDRVTWYENTDGEATFALGVDISTTADGA TLALADLDGDDDLD+VSASV SGLA XXXXXXXXXXXXXX SFDGNHTAG+FPDGRILWLENDGSGSFAEG+DIGLL+SARNVVAVDLDNDGD+DLV CDGVGGSIVWYENTDGTGNFSEVIITTDVGV+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXL+IEIEDDDGGSDAT TTAPA D T+DPAA
Sbjct: 1 MKMDSSPHCXXXXXXXXXXXXXXXXC--PPTTLQEPLQVSRMAGQPARRRG-SRRAWEAGSWRLPAACCLLGLLTASSRLLPVEGAGTVAFKNGWEIDSEAEDVVVIFAADLDGDEDLDLLVGSYWNDWVRWYENEDGKGAFSEAMDVASGYGGAGSIDVGDLDGDGSPDVVVAFQTSFQLTWFSNLDGLGEFSVGTDIDTYEDGDHSNFVKVADLDGDGDLDVIMASKQGDRVTWYENTDGEATFALGVDISTTADGAFTLALADLDGDDDLDIVSASVVSGLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFDGNHTAGSFPDGRILWLENDGSGSFAEGKDIGLLESARNVVAVDLDNDGDIDLVTCDGVGGSIVWYENTDGTGNFSEVIITTDVGVYWLXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLIEIEDDDGGSDATRTTAPAVAPSPTDVTSDPAA 479
BLAST of mRNA_E-siliculosus-1a_F_contig150.2909.1 vs. uniprot
Match: D7FHI7_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHI7_ECTSI) HSP 1 Score: 578 bits (1491), Expect = 1.350e-199 Identity = 361/491 (73.52%), Postives = 384/491 (78.21%), Query Frame = 1
Query: 124 MAGQPARRRRRSRRAWGAGSWRLPASCCLLGLLTASSRLLPVEGAGTVAFKNGWEIDSEAEDVVVIFAADLDGDGDLDLLAGSYSEDWVRWYKNEDGKGAFSEAMDVASDYGGAGSIDVGDLDGDGSPDVVVAFQTSFKLTWFSNLDGLGEFSVGTDIDTYEDGDHSNFVKVADLDGDGDLDVIMASKQGDRVTWYENTDGEATFALGVDISTTADGAITLALADLDGDDDLDVVSASVFSGLAWYENSNGAFSLGVSLE--PAD-PAGGKDVVTXXXXXXXXXXXXXXSFDGNHTAGNFPDGRILWLENDGSGSFAEGRDIGLLDSARNVVAVDLDNDGDVDLVACDGVGGSIVWYENTDGTGNFSEVIITTDVGVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-LVIEIEDDDGGSDATG-----------TTAPADATTDPAADAGDSDSGSAEDLWTNEMLIGVVSTVSSAMFFGLGKILWDRR 1551
MAGQPAR SRRAW A SW LPA+CCLLGLLTASS +L VEGAGT AF+ G +DS+AEDVVV+FAADLD DGDLDLL G+Y EDWVRWY+NEDGKG FSEA+DVAS YGGA SIDVGDL+GDGSPDVVVAFQT+F+LTWFSNL GLGEFSVG DIDTYEDGD S VKVADLDGDGDLDVIMASKQGDRVTWYENTDGEATFA+GVDISTTADGAITLALADLDGDDDLDV+SASVFSGLA PAD PAGGKDVVT SFDGNHTAG+FPDGRILWLENDGSGSFAEGRD+GLLDSARNVVAVDLDNDGD+DLVACDGVGGSIVWYENT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX L+IEIEDD +P D TTDPAAD G SDS SA+DL TNE+LI VVST +SAMF GL KILWDR+
Sbjct: 1 MAGQPARPPG-SRRAWEAESWCLPAACCLLGLLTASSWVLSVEGAGTAAFEIGRRVDSDAEDVVVVFAADLDDDGDLDLLVGTYVEDWVRWYENEDGKGTFSEAVDVASGYGGAASIDVGDLNGDGSPDVVVAFQTTFQLTWFSNLYGLGEFSVGADIDTYEDGDQSRSVKVADLDGDGDLDVIMASKQGDRVTWYENTDGEATFAVGVDISTTADGAITLALADLDGDDDLDVISASVFSGLAXXXXXXXXXXXXXXXXXXPADDPAGGKDVVTADIDGDGDIDIISASFDGNHTAGSFPDGRILWLENDGSGSFAEGRDVGLLDSARNVVAVDLDNDGDIDLVACDGVGGSIVWYENTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLIEIEDDXXXXXXXXXXXXXXXXXAVAPSPDDVTTDPAADTGSSDSESADDLSTNEVLIAVVSTAASAMFLGLVKILWDRK 490
BLAST of mRNA_E-siliculosus-1a_F_contig150.2909.1 vs. uniprot
Match: D7FHI6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHI6_ECTSI) HSP 1 Score: 474 bits (1220), Expect = 4.340e-160 Identity = 303/403 (75.19%), Postives = 318/403 (78.91%), Query Frame = 1
Query: 466 GSIDVGDLDGDGSPDVVVAFQTSFKLTWFSNLDGLGEFSVGTDIDTYEDGDHSNFVKVADLDGDGDLDVIMASKQGDRVTWYENTDGEATFALGVDISTTADGAITLALADLDGDDDLDVVSASVFSGLAWYENSNGAFSLGVSL--EPAD-PAGGKDVVTXXXXXXXXXXXXXXSFDGNHTAGNFPDGRILWLENDGSGSFAEGRDIGLLDSARNVVAVDLDNDGDVDLVACDGVGGSIVWYENTDGTGNFSEVIITTDVGVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-LVIEIEDDDGGSDATGTTA-----------PADATTDPAADAGDSDSGSAEDLWTNEMLIGVVSTVSSAMFFGLGKILWDRRPRVAAVEAAVQYSNGS--RRHREPVG 1623
GSIDVGDL+GDGSPDVVVAFQT+F+LTWFSNLDGLGEFSVGTDIDTYEDGD S VKVADLDGDGDLDVIMASKQGDRVTWYENTDGEATFALGVDISTTADGAITLALADLDGDDDLDV+SASVFSGLA EPAD PAGGKDVVT SFDGNHTAGNFPDGRILWLENDG GSFAEGRD+GLLDSARNVVAVDLDNDGD+DL+AC+ VGG IVWYENT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX L+IEI+DDDGGSDATGTTA P D TTDPAAD GDSD+ SAEDLWTNEMLI VVSTV+SAMF GL KILWDRRPR+A +EA V Y N S + EPVG
Sbjct: 4 GSIDVGDLNGDGSPDVVVAFQTTFQLTWFSNLDGLGEFSVGTDIDTYEDGDQSRSVKVADLDGDGDLDVIMASKQGDRVTWYENTDGEATFALGVDISTTADGAITLALADLDGDDDLDVISASVFSGLAXXXXXXXXXXXXXXXXXEPADDPAGGKDVVTADIDGDGDMDIISASFDGNHTAGNFPDGRILWLENDGLGSFAEGRDVGLLDSARNVVAVDLDNDGDIDLLACENVGGHIVWYENTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLIEIDDDDGGSDATGTTATPAPXXXXXPSPDDVTTDPAADTGDSDNDSAEDLWTNEMLIAVVSTVASAMFLGLVKILWDRRPRLAVIEAPVGYPNRSICQNCPEPVG 406
BLAST of mRNA_E-siliculosus-1a_F_contig150.2909.1 vs. uniprot
Match: A0A6H5K481_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K481_9PHAE) HSP 1 Score: 247 bits (630), Expect = 1.850e-70 Identity = 150/309 (48.54%), Postives = 194/309 (62.78%), Query Frame = 1
Query: 214 GLLTASSRLLPVEGAGTVAFKNGWEIDSEAEDVVVIFAADLDGDGDLDLLAG---SYSEDWVRWYKNEDGKGAFSEAMDVASDY-GGAGSIDVGDLDGDGSPDVVVAFQTSFKLTWFSNLDGLGEFSVGTDIDTYEDGDHSNFVKVADLDGDGDLDVIMASKQGDRVTWYENTDGEATFALGVDISTTADGAITLALADLDGDDDLDVVSASVFSG-LAWYENSNG--AFSLGVSLEPADPAGGKDVVTXXXXXXXXXXXXXXSFDGNHTAGNFPDGRILWLEN-DGSGSFAEGRDIGLLDSARNVVAV 1116
GLL A+ PV+ AGTVAF NG ID++A + + AAD+D DGDLD+L SY E V WY+N DG+G FSE + ++ D AGS+ V DL+GDG PDVVVAF S +TW+ N DGLG FS+G DI T DG + VK AD+DGDGD D+I S DRVTWYENTDGE TFA+G+DIS T+ GA AD+DGD+ +D+V AS + W++N++G AF+LGV L A A G V D + +G++ DGR+ W EN DG+G+FA G+DI +L S + VAV
Sbjct: 17 GLLVAALIAAPVDAAGTVAFANGRSIDADANAAMAVVAADIDSDGDLDVLVAKLMSYDERTVIWYENVDGEGTFSEGVAISDDRESAAGSVAVADLNGDGFPDVVVAFPYSDTVTWYRNSDGLGSFSLGVDIATDTDG--AWVVKCADVDGDGDFDIISVSSFDDRVTWYENTDGEGTFAVGLDISATSSGADMAVAADIDGDEAVDIVVASFDDDRVTWFKNTDGKGAFALGVDL--AQDANGATYVAAGDLDGDG--------DLDVVSGSYYDGRVTWYENTDGAGTFAVGQDIDILPSVASAVAV 313
BLAST of mRNA_E-siliculosus-1a_F_contig150.2909.1 vs. uniprot
Match: D8LE48_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE48_ECTSI) HSP 1 Score: 211 bits (536), Expect = 8.540e-58 Identity = 143/236 (60.59%), Postives = 158/236 (66.95%), Query Frame = 1
Query: 469 SIDVGDLDGDGSPDVVVAFQTSFKLTWFSNLDGLGEFSVGTDIDTYEDGDHSNFVKVADLDGDGDLDVIMASKQGDRVTWYENTDGEATFALGVDISTTADGAITLALADLDGDDDLDVVSASVFSGLAWYENSNGAFSLGV--SLEPADPAGGKDVVTXXXXXXXXXXXXXXSFDGNHTAGNFPDGRILWLEN-DGSGSFAEGRDIGLLDSARNVVAVDLDNDGDVDLVACDGVG 1167
SIDVGDLDGDG PDV VAFQ S + WF N DG G F+ GTDIDT G SN VK+AD+DGDGDLDV+ A K GDRVTWYEN DGE TFA+G+D+STTADGA LA SLE +PA KDVVTXXXXXXXXXXXXXXS+DG+H + N+ DGRI W+EN DG G+F EG DI LDSAR VV VDLDNDGDVDLVACD VG
Sbjct: 45 SIDVGDLDGDGFPDVAVAFQLSDHVVWFRNADGQGGFTTGTDIDTDAGGSPSN-VKLADVDGDGDLDVVSAWKTGDRVTWYEN-DGEGTFAIGLDLSTTADGAYGLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLERGEPA--KDVVTXXXXXXXXXXXXXXSYDGSHASSNYYDGRIFWIENTDGEGTFGEGEDIDSLDSARIVVPVDLDNDGDVDLVACDNVG 276
BLAST of mRNA_E-siliculosus-1a_F_contig150.2909.1 vs. uniprot
Match: A0A1F3PQL1_9BACT (Por_Secre_tail domain-containing protein n=2 Tax=Bacteroidetes TaxID=976 RepID=A0A1F3PQL1_9BACT) HSP 1 Score: 204 bits (519), Expect = 5.970e-53 Identity = 123/314 (39.17%), Postives = 175/314 (55.73%), Query Frame = 1
Query: 319 IFAADLDGDGDLDLLAGSYSEDWVRWYKNEDGKGAFSEAMDVASDYGGAGSIDVGDLDGDGSPDVVVAFQTSFKLTWFSNLDGLGEFSVGTDIDTYEDGDHSNFVKVADLDGDGDLDVIMASKQGDRVTWYENTDGEATFALGVDISTTADGAITLALADLDGDDDLDVVSASVFS---GLAWYENSNGAFSLGVSLEPADPAGGKDVVTXXXXXXXXXXXXXXSFDGNHT--AGNFPDGRILWLEN-DGSGSFAEGRDIGLL-DSARNVVAVDLDNDGDVDLVACDGVGGSIVWYENTDGTGNF-SEVIITTD 1236
I +AD+DGDGD+D+L+ S+ +D + WY+N DG G F + +D GA + D+DGDG DV+ A T K+ W+ N DG G F + I T D S V ADLDGDGD+DV+ AS+ D++ WYENTDG TF + ISTTA A+++ ADLD D D+DV+SAS + WYEN++G + G + ++T DG+ + + D +I W EN DG+G F I + A++V + DLD DGD+D+++ I WYENTDG G F ++ +ITT+
Sbjct: 349 ICSADIDGDGDMDVLSASFHDDKIAWYENTDGSGTFGTQQSITTDANGARDVCCADIDGDGDMDVLSASSTDDKIAWYENTDGNGSFGIQQVITTVADNARS--VYSADLDGDGDMDVLSASEDDDKIAWYENTDGNGTFGVQQIISTTAYYALSVYSADLDSDGDMDVLSASATEYEDKICWYENTDGNGTFGT----------QQIITTDAYYAVSIYSADIDGDGDMDVLSASSSDDKIAWYENTDGNGIFGPQNVITTAANGAQSVYSADLDGDGDMDVLSASFSDNKIAWYENTDGNGTFGAQQVITTE 650
BLAST of mRNA_E-siliculosus-1a_F_contig150.2909.1 vs. uniprot
Match: A0A1W9LJS4_9DELT (Cadherin_4 domain-containing protein (Fragment) n=1 Tax=Desulfobacteraceae bacterium IS3 TaxID=1934248 RepID=A0A1W9LJS4_9DELT) HSP 1 Score: 204 bits (520), Expect = 2.640e-52 Identity = 125/315 (39.68%), Postives = 178/315 (56.51%), Query Frame = 1
Query: 289 IDSEAEDVVVIFAADLDGDGDLDLLAGSYSEDWVRWYKNEDGKGAFSEAMDVASDYGGAGSIDVGDLDGDGSPDVVVAFQTSFKLTWFSNLDGLGEFSVGTDIDTYEDGDHSNFVKVADLDGDGDLDVIMASKQGDRVTWYENTDGEATFALGVDISTTADGAITLALADLDGDDDLDVVSASVFSG-LAWYENSNGAFSLGVSLEPADPAGGKDVVTXXXXXXXXXXXXXXSFDGNHTAGNFPDGR--ILWLENDGSGSFAEGRDIG--LLDSARNVVAVDLDNDGDVDLVACDGVGGSIVWYENTDGTGNFSE 1218
I EA+ +FAAD+DGDGD+D+++ S ++ + WY+N DGKG F +++D A S+ GD+DGDG DVV A K+ W+ N DG G F I +G ++FV D+DGDGD DV+ AS +++ WYENTDG+ +FA I+T ADG ++L++AD+D D D DV+SAS+ G +AWYEN++GA + VS A G V DG+ + + I W ENDG+G+F I + ++V ++DLD D D D+V+ IVWYENTDG G F+E
Sbjct: 330 ISVEADGASCVFAADVDGDGDIDVVSASAWDNKIAWYENTDGKGNFGSQKIISTDANWALSVFAGDIDGDGDADVVSASANDNKIAWYENTDGKGSFGTQKLISLEAEG--ASFVFAGDIDGDGDADVLSASANDNKIAWYENTDGKGSFAQQNTITTQADGVLSLSIADVDADGDSDVISASLNDGKVAWYENTDGAGAF-VSQNVIYAATGSRV--------SFVFAGDVDSDGDADVLSLSENSEIITWYENDGAGNFGTPMLINPEINRGIKSVFSIDLDGDNDADVVSAFAFDDKIVWYENTDGKGTFTE 633
BLAST of mRNA_E-siliculosus-1a_F_contig150.2909.1 vs. uniprot
Match: UPI00165541A0 (T9SS type A sorting domain-containing protein n=1 Tax=Kordia aestuariivivens TaxID=2759037 RepID=UPI00165541A0) HSP 1 Score: 197 bits (502), Expect = 8.060e-50 Identity = 117/322 (36.34%), Postives = 174/322 (54.04%), Query Frame = 1
Query: 289 IDSEAEDVVVIFAADLDGDGDLDLLAGSYSEDWVRWYKNEDGKGAFSEAMDVASDYGGAGSIDVGDLDGDGSPDVVVAFQTSFKLTWFSNLDGLGEFSVGTDIDTYEDGDHSNFVKVADLDGDGDLDVIMASKQGDRVTWYENTDGEATFALGVDISTTADGAITLALADLDGDDDLDVVSAS-VFSGLAWYENSNGAFSLGVSLEPADPAGGKDVVTXXXXXXXXXXXXXXSFDGNHT--AGNFPDGRILWLEN-DGSGSFAEGRDIGL-LDSARNVVAVDLDNDGDVDLVACDGVGGSIVWYENTDGTGNFSEVIITTDV 1239
I ++ +D +FA DLDGDGD+D+L+ SY ++ + WY+N DG+G F + + A S+ DLDGDG D+V + T + WF N DG G F I TY D + V D+DGDGD+D++ AS D++ WYENTDG+ F IST AD A ++ DLDGD D+DV+SAS +AWYEN++G + G + ++T DG++ + + D +I W EN +G G F + I + A +V A D+DNDGD+D++A + +VW+EN + N +++ DV
Sbjct: 439 ITTDIDDAESVFAIDLDGDGDIDVLSASYDDNKIAWYENTDGQGTFGPQQIITTGASNAESVYAADLDGDGDMDIVSTYSTISSVVWFENTDGQGNFGARQTI-TYN-ADFAQAVYAEDIDGDGDMDILSASSGDDKIAWYENTDGQGNFGTQQVISTNADSASSVYAIDLDGDGDIDVLSASRADDKIAWYENTDGQGTFGA----------QQIITTDADFATSVYAIDMDNDGDNDVISASSTDDKIAWYENTNGQGGFGVQQIIVTNANGASSVYAADVDNDGDIDILAASRLDSKVVWHENLGTSSNTINGLVSLDV 748
BLAST of mRNA_E-siliculosus-1a_F_contig150.2909.1 vs. uniprot
Match: A0A1F3PTM3_9BACT (Por_Secre_tail domain-containing protein n=1 Tax=Bacteroidetes bacterium RIFOXYA12_FULL_38_20 TaxID=1797368 RepID=A0A1F3PTM3_9BACT) HSP 1 Score: 195 bits (496), Expect = 1.250e-49 Identity = 130/331 (39.27%), Postives = 176/331 (53.17%), Query Frame = 1
Query: 259 GTVAFKNGWEIDSEAEDVVVIFAADLDGDGDLDLLAGSYSEDWVRWYKNEDGKGAFSEAMDVASDYGGAGSIDVGDLDGDGSPDVVVAFQTSFKLTWFSNLDGLGEFSVGTDIDTYEDGDHSNFVKVADLDGDGDLDVIMASKQGDRVTWYENTDGEATFALGVDISTTADGAITLALADLDGDDDLDVVSASVFSG-LAWYEN--SNGAFSL----------GVSLEPADPAGGKDVVTXXXXXXXXXXXXXXSFDGNHTAGNFPDGRILWLEN-DGSGSFAEGRDIGLL-DSARNVVAVDLDNDGDVDLVACDGVGGSIVWYENTDGTG 1206
G AF I + V I+ DLDGDGD+D+L+ S +D + WY+N DG G++S + S GA + DLDGDG DV+ A + K+ WF N+DG G FS I T + S V ADLDGDGDLDVI AS Q D++ WYENTDG TF ++T AD A ++ ADLDGD D+D++SAS + +AWYEN NG F + VS+ PAD G D+ + + + D +I W EN DG+G+F + I + D A +V + D+D DGD+D+++ I WYEN TG
Sbjct: 431 GDGAFGPQKVITTSVNGVCSIYCTDLDGDGDIDILSASSDDDKIAWYENIDGNGSYSIQQVITSVANGAQCVSSADLDGDGDMDVLSASKDDDKIAWFENIDGYGTFSFQQIISTAANSPRS--VNCADLDGDGDLDVISASYQDDKIAWYENTDGFGTFGTQNVVTTLADAAHSINSADLDGDGDIDLLSASYYDDKIAWYENVDGNGTFGVQQIISTLADYAVSIFPADLDGDGDM--------------------DVLSASKGDDKIAWYENTDGNGAFGPQQAITTIADFAMSVYSADIDGDGDMDVLSASVDDDKIAWYENLLVTG 739
BLAST of mRNA_E-siliculosus-1a_F_contig150.2909.1 vs. uniprot
Match: UPI0015CC037F (T9SS type A sorting domain-containing protein n=1 Tax=Winogradskyella costae TaxID=2697008 RepID=UPI0015CC037F) HSP 1 Score: 196 bits (498), Expect = 2.670e-49 Identity = 119/325 (36.62%), Postives = 178/325 (54.77%), Query Frame = 1
Query: 259 GTVAFKNGWEIDSEAEDVVVIFAADLDGDGDLDLLAGSYSEDWVRWYKNEDGKGAFSEAMDVASDYGGAGSIDVGDLDGDGSPDVVVAFQTSFKLTWFSNLDGLGEFSVGTDIDTYEDGDHSNFVKVADLDGDGDLDVIMASKQGDRVTWYENTDGEATFALGVDISTTADGAITLALADLDGDDDLDVVSASVFSG-LAWYENSNGAFSLGVSLEPADPAGGKDVVTXXXXXXXXXXXXXXSFDGNH--TAGNFPDGRILWLEN-DGSGSFAEGRDIGLLD--SARNVVAVDLDNDGDVDLVACDGVGGSIVWYENTDGTGNFS 1215
G +F + I + A+ V +++ D +GDG +D+L+ S +D + WY+N DG+G FS +++ S V D+DGDG DV+ A + K+ W+ N+DGLG F +G +G N V AD+DGDGD+DV+ AS+ D + WYEN +G F I+T ADGA ++ D+DGD D+DVVSAS + +AWYEN++G G + ++T DG+ + +F D +I W EN DG G+F + + I D A +V A D+D DGD+D+++ G I W+EN +G GNFS
Sbjct: 333 GYGSFGSQQIITTNADFAVSLYSGDFNGDGYIDVLSASRHDDKIAWYENTDGQGNFSIPQIISAIVYNLTSTHVSDIDGDGDVDVLSASKGDGKIAWYENIDGLGSFDLGLQRTVISNGSEFNSVYSADIDGDGDMDVLSASRNSDVIAWYENINGLGNFGQQQQITTDADGAQSVYAIDIDGDGDMDVVSASAYDNKIAWYENTDGLGGFG----------SQQIITTNAEFAISLYSSDLDGDGDMDIVSASFNDNKIAWYENTDGQGNF-DSQQIITTDVLGASSVYAADIDGDGDMDILSTSTSEGKIDWFENINGLGNFS 646 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig150.2909.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig150.2909.1 >prot_E-siliculosus-1a_F_contig150.2909.1 ID=prot_E-siliculosus-1a_F_contig150.2909.1|Name=mRNA_E-siliculosus-1a_F_contig150.2909.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=542bp MKMDSSPPPVGCCPPRLLQQRRQQEDEFPPTTLQEPLQVSRMAGQPARRRback to top mRNA from alignment at E-siliculosus-1a_F_contig150:8232..14822+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig150.2909.1 ID=mRNA_E-siliculosus-1a_F_contig150.2909.1|Name=mRNA_E-siliculosus-1a_F_contig150.2909.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=6591bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig150:8232..14822+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig150:8232..14822+ >mRNA_E-siliculosus-1a_F_contig150.2909.1 ID=mRNA_E-siliculosus-1a_F_contig150.2909.1|Name=mRNA_E-siliculosus-1a_F_contig150.2909.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3252bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig150:8232..14822+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |