mRNA_E-siliculosus-1a_F_contig15.2904.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig15.2904.1 vs. uniprot
Match: D7G0Q4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Q4_ECTSI) HSP 1 Score: 643 bits (1659), Expect = 3.060e-232 Identity = 334/350 (95.43%), Postives = 341/350 (97.43%), Query Frame = 1
Query: 1 MYTKLFASLTLLVIPGVARGLIETCEDLQAAFELTQTQDVVDEISTFGDIDCPTFTNMTMTSNTLTLNSAEDLSISSGSTSLTNVRLEVTNGAKLFWETSVFFLGDEEVENNVNGGGVFVGEGSTMRFLNDVQMRDVRITNERDGDSDNAVFVRDGGCVWTAGFFRVDGEATFTSCAIIGAGESPPGSGGAVFVDATGSVLFNQGVAISDTFITNDGGGDGGGIFNLGKVNIKGDSRFEELSARSGAAIFNGEDASFNFRNGASAFFRDLSNRDSEGSALVNLGFFKFSGPALFVDAEAPVIVATAGGTTIISSNSAFWMFENDDVTGDAISVADSAEVSIPGSVSFVGF 1050
MYTKLF+SL LLVIPGVARGLIETCEDLQAAFELTQTQDVVDEISTFGDI+CP FTNMTMTSNTLTLNSAEDLSI+SGSTSL NVRLEVTNGAKL WETSVFFLGDEEVENNVNGGGVFVGEGST+RFLNDVQ+RDVRITNERDGDSDNAVFVRDGGCVWTAGFFRVDGEATFTSCAIIG GESPPGSGGAVFVDATGSVLFNQGVAISDTFITNDGGGDGGGIFNLGKVNIKGDSRFEELSARSGAAIFNGEDASFNFRNGASAFFRDLSNRDSEGSALVNLGFFKFSGP LFVDAEAPVIVAT G TTIIS +SAFWMFENDDVTG+AISVADSAEVSIPGSVSFVGF
Sbjct: 1 MYTKLFSSLALLVIPGVARGLIETCEDLQAAFELTQTQDVVDEISTFGDIECPMFTNMTMTSNTLTLNSAEDLSITSGSTSLINVRLEVTNGAKLVWETSVFFLGDEEVENNVNGGGVFVGEGSTVRFLNDVQIRDVRITNERDGDSDNAVFVRDGGCVWTAGFFRVDGEATFTSCAIIGTGESPPGSGGAVFVDATGSVLFNQGVAISDTFITNDGGGDGGGIFNLGKVNIKGDSRFEELSARSGAAIFNGEDASFNFRNGASAFFRDLSNRDSEGSALVNLGFFKFSGPVLFVDAEAPVIVATEGSTTIISRDSAFWMFENDDVTGEAISVADSAEVSIPGSVSFVGF 350
BLAST of mRNA_E-siliculosus-1a_F_contig15.2904.1 vs. uniprot
Match: A0A6H5JCE5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCE5_9PHAE) HSP 1 Score: 469 bits (1206), Expect = 4.710e-162 Identity = 245/350 (70.00%), Postives = 287/350 (82.00%), Query Frame = 1
Query: 1 MYTKLFASLTLLVIPGVARGLIETCEDLQAAFELTQTQDVVDEISTFGDIDCPTFTNMTMTSNTLTLNSAEDLSISSGSTSLTNVRLEVTNGAKLFWETSVFFLGDEEVENNVNGGGVFVGEGSTMRFLNDVQMRDVRITNERDGDSDNAVFVRDGGCVWTAGFFRVDGEATFTSCAIIGAGESPPGSGGAVFVDATGSVLFNQGVAISDTFITNDGGGDGGGIFNLGKVNIKGDSRFEELSARSGAAIFNGEDASFNFRNGASAFFRDLSNRDSEGSALVNLGFFKFSGPALFVDAEAPVIVATAGGTTIISSNSAFWMFENDDVTGDAISVADSAEVSIPGSVSFVGF 1050
MYTK +SL LL+IPG GLIETC+DL AAFE TQT+DVV E+ F DI+C TFTNMTMTSN+LT++S+E++ SGS+SL NVRL+VTNGAKLFWET+V F GDEE + V+GG V+VGEGST+RFLNDVQM+D+ I NERD DSD + FVR GGCVWTAG+FRVDGEATFT C I GAGESPPG GGAV+V TGSVLFN GV I+DT IT+D GG GGGI+NLGKVNIKGDSRFE++SA SG AI+NGE A+FNFR+GA AFF+DL+NRDSEGSAL N GFFKFSGPALF DAE PVIVA TIIS +SAFW + D+ GDA+SV D A+ ++P SV+FVGF
Sbjct: 82 MYTKGLSSLALLLIPGACHGLIETCDDLLAAFEQTQTEDVVVEMHPFADIECETFTNMTMTSNSLTVSSSENIDNFSGSSSLVNVRLDVTNGAKLFWETNVIFEGDEETDLMVDGGAVYVGEGSTVRFLNDVQMQDIAIINERDEDSDFSSFVRSGGCVWTAGYFRVDGEATFTGCDISGAGESPPGPGGAVYVGETGSVLFNGGVTITDTHITDDFGGSGGGIYNLGKVNIKGDSRFEDISASSGVAIYNGEGATFNFRSGARAFFKDLNNRDSEGSALFNRGFFKFSGPALFFDAELPVIVAVDNSETIISEDSAFWTW--DESPGDALSVNDGADFTLPDSVTFVGF 429
BLAST of mRNA_E-siliculosus-1a_F_contig15.2904.1 vs. uniprot
Match: D7FGT1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGT1_ECTSI) HSP 1 Score: 462 bits (1188), Expect = 1.500e-160 Identity = 244/350 (69.71%), Postives = 285/350 (81.43%), Query Frame = 1
Query: 1 MYTKLFASLTLLVIPGVARGLIETCEDLQAAFELTQTQDVVDEISTFGDIDCPTFTNMTMTSNTLTLNSAEDLSISSGSTSLTNVRLEVTNGAKLFWETSVFFLGDEEVENNVNGGGVFVGEGSTMRFLNDVQMRDVRITNERDGDSDNAVFVRDGGCVWTAGFFRVDGEATFTSCAIIGAGESPPGSGGAVFVDATGSVLFNQGVAISDTFITNDGGGDGGGIFNLGKVNIKGDSRFEELSARSGAAIFNGEDASFNFRNGASAFFRDLSNRDSEGSALVNLGFFKFSGPALFVDAEAPVIVATAGGTTIISSNSAFWMFENDDVTGDAISVADSAEVSIPGSVSFVGF 1050
M++++ + +LL + GVA GLIETCEDLQAAF LTQTQDV+DEI F DI+C TFTNMTMTSNTLTLNS+E+L GS+SLTNVRL VTNGA+L WET V F+GDEEVE V+GG VFVGEGST+ FLND++M D+RI NERD DSD A FVR GGCVWTAG F VDGEATFT C I GAGESPPG GGA++V ATGSV FNQGVAIS+TFIT+D GG GGGI+NLG+V I GDSRFE++SA SG AI+NGE A F F N ASAFFRDL+NRDS GS L NLG+F+FSGPALFV+A+APVIVAT TI+S NSAFW F D+ G+A+SV ++A+ +IP SV FVGF
Sbjct: 1 MFSEIVSPFSLLFLVGVAHGLIETCEDLQAAFNLTQTQDVIDEIHPFQDIECETFTNMTMTSNTLTLNSSENLDNFFGSSSLTNVRLVVTNGAELIWETHVNFIGDEEVELMVDGGAVFVGEGSTVHFLNDLEMEDIRIINERDEDSDFASFVRSGGCVWTAGSFIVDGEATFTRCDITGAGESPPGPGGAIYVGATGSVSFNQGVAISETFITDDFGGQGGGIYNLGEVTIAGDSRFEDISASSGVAIYNGEGAEFYFTNDASAFFRDLNNRDSVGSGLTNLGYFEFSGPALFVEADAPVIVATETSQTILSENSAFWTF--DEEFGEALSVDEAADFTIPASVVFVGF 348
BLAST of mRNA_E-siliculosus-1a_F_contig15.2904.1 vs. uniprot
Match: D7G1Q9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1Q9_ECTSI) HSP 1 Score: 432 bits (1112), Expect = 1.980e-149 Identity = 232/350 (66.29%), Postives = 266/350 (76.00%), Query Frame = 1
Query: 1 MYTKLFASLTLLVIPGVARGLIETCEDLQAAFELTQTQDVVDEISTFGDIDCPTFTNMTMTSNTLTLNSAEDLSISSGSTSLTNVRLEVTNGAKLFWETSVFFLGDEEVENNVNGGGVFVGEGSTMRFLNDVQMRDVRITNERDGDSDNAVFVRDGGCVWTAGFFRVDGEATFTSCAIIGAGESPPGSGGAVFVDATGSVLFNQGVAISDTFITNDGGGDGGGIFNLGKVNIKGDSRFEELSARSGAAIFNGEDASFNFRNGASAFFRDLSNRDSEGSALVNLGFFKFSGPALFVDAEAPVIVATAGGTTIISSNSAFWMFENDDVTGDAISVADSAEVSIPGSVSFVGF 1050
MYTK +SL LL++PG GLIETC+DL AAFE TQT+DVV E+ F DI+C TFTNMTMTSNTLTL FWET+V F GDEE E V+GG V+VGEGST+RFLNDVQMRDV I NERD DSD A FVR GGCVWTAG+FRVDGEATFT C IIGAGESPPG GGAV+V TGSVLFN+GV I++T IT+D GG GGGI+NLGKVNIKGDSRFEE+SA +G AI+NGE A+FNFRNGA AFFRDL+NRDSEGSALVNLGFFKFSGPA F DAE PVIVA TI+S +SAFW + D+ GDA++V + A+ ++P SV+FVGF
Sbjct: 1 MYTKGLSSLALLLMPGTCHGLIETCDDLLAAFEQTQTEDVVVEMHPFADIECDTFTNMTMTSNTLTL----------------------------FWETNVIFEGDEEAELMVDGGAVYVGEGSTVRFLNDVQMRDVVIINERDEDSDFASFVRSGGCVWTAGYFRVDGEATFTGCDIIGAGESPPGPGGAVYVGETGSVLFNEGVTITETSITDDFGGKGGGIYNLGKVNIKGDSRFEEISASAGVAIYNGEGATFNFRNGAGAFFRDLNNRDSEGSALVNLGFFKFSGPAFFFDAELPVIVAMDNSETILSEDSAFWTW--DESPGDALTVNEGADFTLPDSVTFVGF 320
BLAST of mRNA_E-siliculosus-1a_F_contig15.2904.1 vs. uniprot
Match: D7G2Y5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Y5_ECTSI) HSP 1 Score: 250 bits (638), Expect = 4.430e-77 Identity = 152/345 (44.06%), Postives = 206/345 (59.71%), Query Frame = 1
Query: 7 TKLFASLTLLVIPGVARGLIETCEDLQAAFELTQTQDVVDEISTFGDIDCPTFTNMTMTSNTLTLNSAEDLSISSGSTSLTNVRLEVTNGAKLFWETSVFFLGDEEVENNVNGGGVFVGEGSTMRFLNDVQMRDVRITNERDGDSDNAVFVRDGGCVWTAGFFRVDGEATFTSCAIIGAGESPPGSGGAVFVDATGSVLFNQGVAISDTFITNDGGGDGGGIFNLGKVNIKGDSRFEELSARSGAAIFNGEDASFNFRNGASAFFRDLSNRDSEGSALVNLGFFKFSGPALFVDAEAPVIVATAGGTTIISSNSAFWMFENDDVTGDAISVADSAEVSIPGSVSF 1041
+K+ A+ LLV V +G +ETC+DL AF LT +QDVV EI DI C +FT M+M++N+LT+ + + SGS L VR EVT+GAKL W F G E +VNGG V+VGEGS+ RF + + +V + + + SD A + GGCV+ G+FRV+G A+F C G GES PG GG ++V TGSVLF V + D I +D G +GGGI+NLGKVNIKG++ F+ L A +G AIFNG A F F+ GA+A F D + D G A+ N G+FK SGPA V+ AP V + G T +S S F + D + V + ++ G V+F
Sbjct: 5 SKISAAALLLVSGSVCQGQLETCQDLLDAFALTASQDVVVEIQPGQDITCDSFTTMSMSANSLTVMTPDG---QSGSVGLNEVRFEVTDGAKLLWYPGASFTGTEY--QDVNGGAVYVGEGSSARFYDTLTTSEVGVRSVPEEGSDFASYQLIGGCVYVDGYFRVEGHASFVGCENSGGGESSPGPGGVMYVGETGSVLFAGEVTMQDVSIIDDEGNNGGGIYNLGKVNIKGNAVFQNLRAEAGGAIFNGSGAEFRFKKGATADFIDCLSFDGIGGAVFNAGYFKLSGPAEVVECRAPTFVVGSSGYTRLSEGSVF-NGDGSDYPEPIMFVMEGGRLTGVGKVTF 343
BLAST of mRNA_E-siliculosus-1a_F_contig15.2904.1 vs. uniprot
Match: A0A6H5JYQ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYQ0_9PHAE) HSP 1 Score: 249 bits (636), Expect = 3.870e-74 Identity = 149/321 (46.42%), Postives = 194/321 (60.44%), Query Frame = 1
Query: 4 YTKLFASLTLLVIPGVARGLIETCEDLQAAFELTQTQDVVDEISTFGDIDCPTFTNMTMTSNTLTLNSAEDLSISSGSTSLTNVRLEVTNGAKLFWETSVFFLGDEEVENNVNGGGVFVGEGSTMRFLNDVQMRDVRITNERDGDSDNAVFVRDGGCV----WTAGFFRVDGEATFTSCAIIGAGESPPGSGGAVFVDATGSVLFNQGVAISDTFITNDGGGDGGGIFNLGKVNIKGDSRFEELSARSGAAIFNGEDASFNFRNGASAFFRDLSNRDSEGSALVNLGFFKFSGPALFVDAEAPVIVATAGGTTIISSNSAF 954
+ K+ A+ LLV V RG +ETC+DL AF LT +QDVV EI DI C FT M+M++N+LT+ + + SGS L VR EVT+GAKLFW F E +VNGG V+VGEGST RF + + +V + + + SD A + GGCV + G+FRV+G A+F C G GES PG GG ++V TGSVLF V + D I +D G +GGGI+NLGKVNIKG++ F+ L A +G AIFNG A F F+ GA+A F D + D G A+ N G+FK SGPA V+ AP V + G T +S S F
Sbjct: 234 FGKISAAALLLVSGSVCRGQVETCQDLLDAFALTASQDVVVEIQPGQDITCDNFTTMSMSANSLTVTATDG---QSGSVGLNEVRFEVTDGAKLFWHPGASFT--ETDYQDVNGGAVYVGEGSTARFYDTLTTSEVGVRSVPEEGSDFASYELIGGCVRAYTYVDGYFRVEGHASFVGCENSGGGESSPGPGGVMYVGETGSVLFAGEVTMQDVSIIDDEGNNGGGIYNLGKVNIKGNALFQNLRAEAGGAIFNGSGAEFRFKKGATADFIDCLSFDGTGGAVFNAGYFKLSGPAEVVECRAPTFVVGSSGYTRLSEGSVF 549
BLAST of mRNA_E-siliculosus-1a_F_contig15.2904.1 vs. uniprot
Match: D8LG63_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG63_ECTSI) HSP 1 Score: 207 bits (526), Expect = 1.350e-62 Identity = 107/167 (64.07%), Postives = 128/167 (76.65%), Query Frame = 1
Query: 400 MRDVRITNERDGDSDNAVFVRDGGCVWTAGFFRVDGEATFTSCAIIGAGESPPGSGGAVFVDATGSVLFNQGVAISDTFITNDGGGDGGGIFNLGKVNIKGDSRFEELSARSGAAIFNGEDASFNFRNGASAFFRDLSNRDSEGSALVNLGFFKFSGPALFVDAEAP 900
MRDV I NE D DSD A + GGCV TAG F V+G+ATFT C +GAGES PG GGA+FV TGSV F++GV I +T IT+D GG GGGI+NLG+VN+ G SRFE++SA SG A++NGE A F NGA+A FRDLSNRDS GSAL LG+F+FSGPALFV+A+ P
Sbjct: 1 MRDVGIINETDEDSDYASYQHSGGCVRTAGTFTVNGDATFTGCESVGAGESAPGPGGAIFVSETGSVSFSEGVTIMETSITDDFGGQGGGIYNLGEVNVAGGSRFEDISASSGVAVYNGEGAQLRFTNGATACFRDLSNRDSVGSALYYLGYFEFSGPALFVEADTP 167 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig15.2904.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig15.2904.1 >prot_E-siliculosus-1a_F_contig15.2904.1 ID=prot_E-siliculosus-1a_F_contig15.2904.1|Name=mRNA_E-siliculosus-1a_F_contig15.2904.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=351bp MYTKLFASLTLLVIPGVARGLIETCEDLQAAFELTQTQDVVDEISTFGDIback to top mRNA from alignment at E-siliculosus-1a_F_contig15:85421..86473- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig15.2904.1 ID=mRNA_E-siliculosus-1a_F_contig15.2904.1|Name=mRNA_E-siliculosus-1a_F_contig15.2904.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1053bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig15:85421..86473- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig15:85421..86473- >mRNA_E-siliculosus-1a_F_contig15.2904.1 ID=mRNA_E-siliculosus-1a_F_contig15.2904.1|Name=mRNA_E-siliculosus-1a_F_contig15.2904.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2106bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig15:85421..86473- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |