mRNA_E-siliculosus-1a_F_contig14999.2897.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig14999.2897.1
Unique NamemRNA_E-siliculosus-1a_F_contig14999.2897.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig14999.2897.1 vs. uniprot
Match: A0A0D5LZR9_9GAMM (Histidine kinase n=6 Tax=Halomonas TaxID=2745 RepID=A0A0D5LZR9_9GAMM)

HSP 1 Score: 412 bits (1058), Expect = 5.210e-141
Identity = 214/237 (90.30%), Postives = 221/237 (93.25%), Query Frame = 1
Query:    1 RYTEQGRVLLGCRRRHNGLEIMVGDTGPGIPEQQREAIFLEFSRVNQPQSAHSRGLGLGLAIVDRISSMLEHPVSLASRPGVGALFSITVPYAAASTSTLPRAIYSSPFAEMDALLQGCIVWVIDDDLAIIEGMQALLSSWGCRVRAAATVSALDAASDGERPTVLLVDYHLGEHRETGIDLAARLQRRYPGLAAVVITANHEAEIKRATREAGMHCLLKPLKPLRLRMLLGTLLSK 711
            RYTE GRVLLGCRRR +GLEIMVGDTGPGIPEQQREAIFLEF RVNQP SA+SRGLGLGLAIVDRISSMLE PVSLASRPGVGALFSITVPYAA +TS LP   Y+SP  E+D  LQGCIVWVIDDDLAIIEGMQALLSSWGCRVRAAATVSAL+AASDGERP VLLVDYHLGEHRETGIDLAARLQRRYPGLAAVVITANHEAEIKRATREAGMHCLLKPLKPLRLRMLLG+LL K
Sbjct:  227 RYTEHGRVLLGCRRRPHGLEIMVGDTGPGIPEQQREAIFLEFRRVNQPHSANSRGLGLGLAIVDRISSMLEQPVSLASRPGVGALFSITVPYAAVATSALPMR-YASPSGEIDDPLQGCIVWVIDDDLAIIEGMQALLSSWGCRVRAAATVSALEAASDGERPAVLLVDYHLGEHRETGIDLAARLQRRYPGLAAVVITANHEAEIKRATREAGMHCLLKPLKPLRLRMLLGSLLHK 462          
BLAST of mRNA_E-siliculosus-1a_F_contig14999.2897.1 vs. uniprot
Match: A0A101D0Q8_9GAMM (Histidine kinase n=2 Tax=root TaxID=1 RepID=A0A101D0Q8_9GAMM)

HSP 1 Score: 397 bits (1019), Expect = 4.580e-135
Identity = 204/238 (85.71%), Postives = 215/238 (90.34%), Query Frame = 1
Query:    1 RYTEQGRVLLGCRRRHNGLEIMVGDTGPGIPEQQREAIFLEFSRVNQPQSAHSRGLGLGLAIVDRISSMLEHPVSLASRPGVGALFSITVPYAAASTST-LPRAIYSSPFAEMDALLQGCIVWVIDDDLAIIEGMQALLSSWGCRVRAAATVSALDAASDGERPTVLLVDYHLGEHRETGIDLAARLQRRYPGLAAVVITANHEAEIKRATREAGMHCLLKPLKPLRLRMLLGTLLSK 711
            RYTEQGRVLLGCRRR  GLEIMVGDTGPGIPEQQREAIFLEF R NQPQ AHSRGLGLGLAIVDRIS+MLEHP+SL SRPGVGALFSITVPYAAA+  T +P   Y+    E    L GC+VWVIDDDLAIIEGMQALLSSWGCRVRAAATVSAL+AASDGE+P VLLVDYHLGEHRETGIDLAARLQRRYPGLA+VVITANHEAEIKRATREAGMHCLLKPLKPLRLRMLL +LL+K
Sbjct:  227 RYTEQGRVLLGCRRRREGLEIMVGDTGPGIPEQQREAIFLEFRRANQPQGAHSRGLGLGLAIVDRISTMLEHPISLVSRPGVGALFSITVPYAAATAITSVPSTRYALLAEEAQDPLHGCVVWVIDDDLAIIEGMQALLSSWGCRVRAAATVSALEAASDGEQPAVLLVDYHLGEHRETGIDLAARLQRRYPGLASVVITANHEAEIKRATREAGMHCLLKPLKPLRLRMLLSSLLNK 464          
BLAST of mRNA_E-siliculosus-1a_F_contig14999.2897.1 vs. uniprot
Match: A0A651D9T5_HALSX (Histidine kinase n=1 Tax=Halomonas sp. TaxID=1486246 RepID=A0A651D9T5_HALSX)

HSP 1 Score: 385 bits (989), Expect = 1.960e-130
Identity = 201/239 (84.10%), Postives = 211/239 (88.28%), Query Frame = 1
Query:    1 RYTEQGRVLLGCRRRHNGLEIMVGDTGPGIPEQQREAIFLEFSRVNQPQSAHSRGLGLGLAIVDRISSMLEHPVSLASRPGVGALFSITVPYAAASTSTLPRAIYSSPFA--EMDALLQGCIVWVIDDDLAIIEGMQALLSSWGCRVRAAATVSALDAASDGERPTVLLVDYHLGEHRETGIDLAARLQRRYPGLAAVVITANHEAEIKRATREAGMHCLLKPLKPLRLRMLLGTLLSK 711
            RYTEQGRVLLGCRRR +GLEIMVGDTGPGIPEQQREAIFLEF R N PQSAHSRGLGLGLAIVDRIS+MLE P+SLASRPG GALFSITVPYAA S++        SP    E D L  GC+VWVIDDDLAIIEGMQALL SWGCRVRAAATVSAL+AASDGE+P VLLVDYHLG+HRETGI LAARLQRRYPGL +VVITANHEAEIKR TREAGMHCLLKPLKPLRLRMLLGTLLSK
Sbjct:  234 RYTEQGRVLLGCRRRRDGLEIMVGDTGPGIPEQQREAIFLEFRRANHPQSAHSRGLGLGLAIVDRISTMLEQPISLASRPGSGALFSITVPYAAVSSTPSSSGSRYSPLPGDEYDPL-HGCVVWVIDDDLAIIEGMQALLGSWGCRVRAAATVSALEAASDGEQPAVLLVDYHLGDHRETGIALAARLQRRYPGLVSVVITANHEAEIKRVTREAGMHCLLKPLKPLRLRMLLGTLLSK 471          
BLAST of mRNA_E-siliculosus-1a_F_contig14999.2897.1 vs. uniprot
Match: A0A365TQS2_9GAMM (Histidine kinase n=2 Tax=Halomonas sulfidaeris TaxID=115553 RepID=A0A365TQS2_9GAMM)

HSP 1 Score: 381 bits (978), Expect = 2.120e-129
Identity = 200/239 (83.68%), Postives = 212/239 (88.70%), Query Frame = 1
Query:    1 RYTEQGRVLLGCRRRHNGLEIMVGDTGPGIPEQQREAIFLEFSRVNQPQSAHSRGLGLGLAIVDRISSMLEHPVSLASRPGVGALFSITVPYAAASTST-LPRAIYSSPFAEMDALLQGCIVWVIDDDLAIIEGMQALLSSWGCRVRAAATVSALDAASDGERPTVLLVDYHLGEHRETGIDLAARLQRRYPGLAAVVITANHEAEIKRATREAGMHCLLKPLKPLRLRMLLGTLLSKS 714
            RYTE GRVLLGCRRR +GLEI+VGDTGPGIPEQQREAIFLEF R NQ  SAHSRGLGLGLAIVDRIS+MLE PVSL SRPG GALFSITVPYA A+  T LP+  Y S   E+D L  GC+VWVIDDDLAI+EGMQALL SWGCRVRAAATVSAL+AASDGERP VLLVDYHLGEHRETGI LA+RLQRRYPGLA+VVITANHEAEIKRATREAGMH LLKPLKPLRLRMLLG LL+KS
Sbjct:  189 RYTEHGRVLLGCRRRRDGLEIVVGDTGPGIPEQQREAIFLEFRRANQVNSAHSRGLGLGLAIVDRISTMLEQPVSLTSRPGEGALFSITVPYAEAALPTALPKKSYPSSPEEIDPL-HGCVVWVIDDDLAILEGMQALLGSWGCRVRAAATVSALEAASDGERPEVLLVDYHLGEHRETGIGLASRLQRRYPGLASVVITANHEAEIKRATREAGMHYLLKPLKPLRLRMLLGILLNKS 426          
BLAST of mRNA_E-siliculosus-1a_F_contig14999.2897.1 vs. uniprot
Match: L9U9Q0_9GAMM (Histidine kinase n=23 Tax=Halomonas TaxID=2745 RepID=L9U9Q0_9GAMM)

HSP 1 Score: 379 bits (974), Expect = 2.420e-128
Identity = 193/238 (81.09%), Postives = 209/238 (87.82%), Query Frame = 1
Query:    1 RYTEQGRVLLGCRRRHNGLEIMVGDTGPGIPEQQREAIFLEFSRVNQPQSAHSRGLGLGLAIVDRISSMLEHPVSLASRPGVGALFSITVPYAAASTSTLPRAIYSSPFAEMDALLQGCIVWVIDDDLAIIEGMQALLSSWGCRVRAAATVSALDAASDGERPTVLLVDYHLGEHRETGIDLAARLQRRYPGLAAVVITANHEAEIKRATREAGMHCLLKPLKPLRLRMLLGTLLSKS 714
            RYTEQGRVLLGCRRR +GLEIMVGDTGPGIPEQQREAIFLEF R NQP S+HSRGLGLGLAIVDRIS+ML  P+SLAS PG GALFSITVPYA A+   +    Y+      +  L GC++WVIDDDLAIIEGMQALL SWGCRVRAAATVSAL+A SDGERP VLLVDYHLG+HRETGI+LAARLQRRYPGLAAVVITANHEAEIKRATREAGM+CLLKPLKPLRLRMLL TLL+K+
Sbjct:  221 RYTEQGRVLLGCRRRRDGLEIMVGDTGPGIPEQQREAIFLEFRRANQPNSSHSRGLGLGLAIVDRISAMLGQPISLASSPGAGALFSITVPYATAAPPAVASTHYTPLPDVAEDPLSGCVIWVIDDDLAIIEGMQALLGSWGCRVRAAATVSALEAVSDGERPAVLLVDYHLGDHRETGIELAARLQRRYPGLAAVVITANHEAEIKRATREAGMYCLLKPLKPLRLRMLLATLLNKA 458          
BLAST of mRNA_E-siliculosus-1a_F_contig14999.2897.1 vs. uniprot
Match: A0A511ULB2_9GAMM (Histidine kinase n=1 Tax=Halovibrio variabilis TaxID=31910 RepID=A0A511ULB2_9GAMM)

HSP 1 Score: 372 bits (954), Expect = 4.910e-125
Identity = 191/242 (78.93%), Postives = 206/242 (85.12%), Query Frame = 1
Query:    1 RYTEQGRVLLGCRRRHNGLEIMVGDTGPGIPEQQREAIFLEFSRVNQPQSAHSRGLGLGLAIVDRISSMLEHPVSLASRPGVGALFSITVPYAAASTSTLPRAIYSSPFAEMDALLQG-----------CIVWVIDDDLAIIEGMQALLSSWGCRVRAAATVSALDAASDGERPTVLLVDYHLGEHRETGIDLAARLQRRYPGLAAVVITANHEAEIKRATREAGMHCLLKPLKPLRLRMLL 693
            RYTEQGRVLLGCRRR +GLEIMVGDTGPGIPEQQREAIFLEF R  QP SAHSRGLGLGLAIVDRIS+MLE PVSL SRPGVGALFSITVPYA A+  T+     + P    + LL G           C++WVIDDDLAIIEGMQALL SWGCRVRAA TVSAL+AASDGE+P +LLVDYHLGEHRETGI+LA+RLQRRYPGL+A+VITANHEAEIKRATREAGMHCLLKPLKPLRLRMLL
Sbjct:  228 RYTEQGRVLLGCRRRRDGLEIMVGDTGPGIPEQQREAIFLEFRRATQPNSAHSRGLGLGLAIVDRISTMLEQPVSLTSRPGVGALFSITVPYATAAIPTVSNLRTALPSDATEDLLNGENPLKEDPLSGCVIWVIDDDLAIIEGMQALLGSWGCRVRAAGTVSALEAASDGEQPAILLVDYHLGEHRETGIELASRLQRRYPGLSAIVITANHEAEIKRATREAGMHCLLKPLKPLRLRMLL 469          
BLAST of mRNA_E-siliculosus-1a_F_contig14999.2897.1 vs. uniprot
Match: A0A455V9E6_9GAMM (Histidine kinase n=1 Tax=Halomonas axialensis TaxID=115555 RepID=A0A455V9E6_9GAMM)

HSP 1 Score: 360 bits (924), Expect = 1.200e-123
Identity = 188/237 (79.32%), Postives = 204/237 (86.08%), Query Frame = 1
Query:    1 RYTEQGRVLLGCRRRHNGLEIMVGDTGPGIPEQQREAIFLEFSRVNQPQSAHSRGLGLGLAIVDRISSMLEHPVSLASRPGVGALFSITVPYAAASTSTLPRAIYSSPFAEM-DALLQGCIVWVIDDDLAIIEGMQALLSSWGCRVRAAATVSALDAASDGERPTVLLVDYHLGEHRETGIDLAARLQRRYPGLAAVVITANHEAEIKRATREAGMHCLLKPLKPLRLRMLLGTLLS 708
            RYTE G +LLGCRRR +GLEIMVGDTGPGIPE QR+AIFLEF R +QPQ+ HSRGLGLGLAIVDRIS+ML+HPV+LASR G G+LFSI VPYAA S   L  A    P A+  D  LQGC+VWV+DDD AI EGMQALL SWGCRVRAAATVSAL+AASDGERP VLLVDYHLGEHRE GIDLAARL+RRYPGLA VVITANHEA +KRATREAGMHCLLKPLKPLRL+MLLGTLL 
Sbjct:   23 RYTEHGHLLLGCRRRADGLEIMVGDTGPGIPEPQRKAIFLEFRRASQPQANHSRGLGLGLAIVDRISTMLDHPVTLASRLGHGSLFSILVPYAA-SCGALEGASSPVPSAQWGDDPLQGCVVWVVDDDPAITEGMQALLGSWGCRVRAAATVSALEAASDGERPAVLLVDYHLGEHRENGIDLAARLRRRYPGLATVVITANHEASLKRATREAGMHCLLKPLKPLRLKMLLGTLLE 258          
BLAST of mRNA_E-siliculosus-1a_F_contig14999.2897.1 vs. uniprot
Match: A0A0D7UZ95_9GAMM (Histidine kinase n=17 Tax=Halomonadaceae TaxID=28256 RepID=A0A0D7UZ95_9GAMM)

HSP 1 Score: 360 bits (924), Expect = 9.110e-121
Identity = 188/237 (79.32%), Postives = 204/237 (86.08%), Query Frame = 1
Query:    1 RYTEQGRVLLGCRRRHNGLEIMVGDTGPGIPEQQREAIFLEFSRVNQPQSAHSRGLGLGLAIVDRISSMLEHPVSLASRPGVGALFSITVPYAAASTSTLPRAIYSSPFAEM-DALLQGCIVWVIDDDLAIIEGMQALLSSWGCRVRAAATVSALDAASDGERPTVLLVDYHLGEHRETGIDLAARLQRRYPGLAAVVITANHEAEIKRATREAGMHCLLKPLKPLRLRMLLGTLLS 708
            RYTE G +LLGCRRR +GLEIMVGDTGPGIPE QR+AIFLEF R +QPQ+ HSRGLGLGLAIVDRIS+ML+HPV+LASR G G+LFSI VPYAA S   L  A    P A+  D  LQGC+VWV+DDD AI EGMQALL SWGCRVRAAATVSAL+AASDGERP VLLVDYHLGEHRE GIDLAARL+RRYPGLA VVITANHEA +KRATREAGMHCLLKPLKPLRL+MLLGTLL 
Sbjct:  221 RYTEHGHLLLGCRRRADGLEIMVGDTGPGIPEPQRKAIFLEFRRASQPQANHSRGLGLGLAIVDRISTMLDHPVTLASRLGHGSLFSILVPYAA-SCGALEGASSPVPSAQWGDDPLQGCVVWVVDDDPAITEGMQALLGSWGCRVRAAATVSALEAASDGERPAVLLVDYHLGEHRENGIDLAARLRRRYPGLATVVITANHEASLKRATREAGMHCLLKPLKPLRLKMLLGTLLE 456          
BLAST of mRNA_E-siliculosus-1a_F_contig14999.2897.1 vs. uniprot
Match: A0A060B8R5_9GAMM (Histidine kinase n=16 Tax=Halomonas TaxID=2745 RepID=A0A060B8R5_9GAMM)

HSP 1 Score: 355 bits (912), Expect = 8.710e-119
Identity = 185/249 (74.30%), Postives = 205/249 (82.33%), Query Frame = 1
Query:    1 RYTEQGRVLLGCRRRHNGLEIMVGDTGPGIPEQQREAIFLEFSRVNQPQSAHSRGLGLGLAIVDRISSMLEHPVSLASRPGVGALFSITVPYAAAS-----------TSTLPRAIYSSPFAEMDALLQGCIVWVIDDDLAIIEGMQALLSSWGCRVRAAATVSALDAASDGERPTVLLVDYHLGEHRETGIDLAARLQRRYPGLAAVVITANHEAEIKRATREAGMHCLLKPLKPLRLRMLLGTLLSKS 714
            RYTE G +LLGCRRR NGLEIMVGDTGPGIPE QR+AIFLEF R NQ QS HSRGLGLGLAIVDRIS+MLEHPVSL S+ G G+LFS+ VP++  +            +  P+A+  S   + D L QGC++WVIDDD AIIEGMQALL SWGCRVRAAATVSAL+AASDGERP VLLVDYHLG+HRE GIDLAARL+RRYPGLA VVITANHEA +KRATREAGMHCLLKPLKPLRL+MLLGTLL  S
Sbjct:  222 RYTEHGHLLLGCRRRANGLEIMVGDTGPGIPEPQRKAIFLEFRRANQSQSGHSRGLGLGLAIVDRISTMLEHPVSLTSQLGRGSLFSVLVPFSVPAXXXXXXXXXXPVAYAPKALPGSDRWQHDPL-QGCVIWVIDDDPAIIEGMQALLGSWGCRVRAAATVSALEAASDGERPAVLLVDYHLGDHRENGIDLAARLRRRYPGLATVVITANHEAALKRATREAGMHCLLKPLKPLRLKMLLGTLLENS 469          
BLAST of mRNA_E-siliculosus-1a_F_contig14999.2897.1 vs. uniprot
Match: A0A2A4HHA7_9GAMM (Histidine kinase n=1 Tax=Halomonas nigrificans TaxID=2042704 RepID=A0A2A4HHA7_9GAMM)

HSP 1 Score: 352 bits (902), Expect = 2.210e-117
Identity = 183/240 (76.25%), Postives = 201/240 (83.75%), Query Frame = 1
Query:    1 RYTEQGRVLLGCRRRHNGLEIMVGDTGPGIPEQQREAIFLEFSRVNQPQSAHSRGLGLGLAIVDRISSMLEHPVSLASRPGVGALFSITVPYAAASTST----LPRAIYSSPFAEMDALLQGCIVWVIDDDLAIIEGMQALLSSWGCRVRAAATVSALDAASDGERPTVLLVDYHLGEHRETGIDLAARLQRRYPGLAAVVITANHEAEIKRATREAGMHCLLKPLKPLRLRMLLGTLLS 708
            RYTEQG +LLGCRRR  GLEI+VGDTGPGIPE QR+AIFLEF R +QP + HSRGLGLGLAIVDRIS+ML+HP++L S  G G+LFSI VPYA + T +       A+  S + E D  LQGC+VWVIDDD AIIEGMQALL SWGCRVRAAATVSAL+A SDGERP VLLVDYHLGEHRE GIDLA RL+RRYPGLA VVITANHEA +KRATREAGMHCLLKPLKPLRLRMLLGTLL 
Sbjct:  222 RYTEQGHLLLGCRRRPQGLEIIVGDTGPGIPEPQRKAIFLEFRRASQPHNNHSRGLGLGLAIVDRISTMLDHPITLTSTLGRGSLFSILVPYAPSITGSGGDKKASAVARSAW-EYDDPLQGCVVWVIDDDPAIIEGMQALLGSWGCRVRAAATVSALEAVSDGERPAVLLVDYHLGEHRENGIDLATRLRRRYPGLATVVITANHEAAVKRATREAGMHCLLKPLKPLRLRMLLGTLLD 460          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig14999.2897.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0D5LZR9_9GAMM5.210e-14190.30Histidine kinase n=6 Tax=Halomonas TaxID=2745 RepI... [more]
A0A101D0Q8_9GAMM4.580e-13585.71Histidine kinase n=2 Tax=root TaxID=1 RepID=A0A101... [more]
A0A651D9T5_HALSX1.960e-13084.10Histidine kinase n=1 Tax=Halomonas sp. TaxID=14862... [more]
A0A365TQS2_9GAMM2.120e-12983.68Histidine kinase n=2 Tax=Halomonas sulfidaeris Tax... [more]
L9U9Q0_9GAMM2.420e-12881.09Histidine kinase n=23 Tax=Halomonas TaxID=2745 Rep... [more]
A0A511ULB2_9GAMM4.910e-12578.93Histidine kinase n=1 Tax=Halovibrio variabilis Tax... [more]
A0A455V9E6_9GAMM1.200e-12379.32Histidine kinase n=1 Tax=Halomonas axialensis TaxI... [more]
A0A0D7UZ95_9GAMM9.110e-12179.32Histidine kinase n=17 Tax=Halomonadaceae TaxID=282... [more]
A0A060B8R5_9GAMM8.710e-11974.30Histidine kinase n=16 Tax=Halomonas TaxID=2745 Rep... [more]
A0A2A4HHA7_9GAMM2.210e-11776.25Histidine kinase n=1 Tax=Halomonas nigrificans Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig14999contigE-siliculosus-1a_F_contig14999:3..719 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start0
Stop1
Cds size717
Model size717
Exons1
Hectar predicted targeting categoryother localisation
BRITEko00000,ko00001,ko00002,ko01000,ko01001,ko02022
Best eggNOG OGNA|NA|NA
Best tax levelOceanospirillales
COG Functional cat.T
EC2.7.13.3
EggNOG OGs1MUY7@1224,1T248@1236,1XH8I@135619,COG0642@1,COG0784@1,COG0784@2,COG2205@2
EggNOG free text desc.PhoQ Sensor
KEGG ModuleM00820
KEGG Pathwayko02020,ko02025,map02020,map02025
KEGG koko:K20975
Preferred namepedS1
Seed eggNOG ortholog1504981.KO116_3885
Seed ortholog evalue1e-112
Seed ortholog score412.9
Taxonomic scopeBacteria
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928008.8217402-CDS-E-siliculosus-1a_F_contig14999:2..7191622928008.8217402-CDS-E-siliculosus-1a_F_contig14999:2..719Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig14999 3..719 +
1696318770.5399935-CDS-E-siliculosus-1a_F_contig14999:2..7191696318770.5399935-CDS-E-siliculosus-1a_F_contig14999:2..719Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig14999 3..719 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig14999.2897.1prot_E-siliculosus-1a_F_contig14999.2897.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig14999 3..719 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig14999.2897.1

>prot_E-siliculosus-1a_F_contig14999.2897.1 ID=prot_E-siliculosus-1a_F_contig14999.2897.1|Name=mRNA_E-siliculosus-1a_F_contig14999.2897.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=239bp
RYTEQGRVLLGCRRRHNGLEIMVGDTGPGIPEQQREAIFLEFSRVNQPQS
AHSRGLGLGLAIVDRISSMLEHPVSLASRPGVGALFSITVPYAAASTSTL
PRAIYSSPFAEMDALLQGCIVWVIDDDLAIIEGMQALLSSWGCRVRAAAT
VSALDAASDGERPTVLLVDYHLGEHRETGIDLAARLQRRYPGLAAVVITA
NHEAEIKRATREAGMHCLLKPLKPLRLRMLLGTLLSKS*
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mRNA from alignment at E-siliculosus-1a_F_contig14999:3..719+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig14999.2897.1 ID=mRNA_E-siliculosus-1a_F_contig14999.2897.1|Name=mRNA_E-siliculosus-1a_F_contig14999.2897.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=717bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig14999:3..719+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CGCTATACCGAGCAAGGCCGTGTGCTGCTGGGTTGTCGACGGCGCCATAA TGGATTGGAAATCATGGTAGGCGATACAGGCCCCGGTATTCCAGAGCAGC AACGCGAAGCAATCTTTCTAGAGTTCTCACGCGTTAACCAGCCACAAAGT GCGCATAGCCGTGGCTTAGGACTAGGACTGGCCATCGTTGACCGCATTAG CAGCATGCTGGAGCACCCTGTATCGCTGGCCTCTCGCCCGGGGGTAGGCG CACTGTTCTCAATCACTGTGCCTTACGCGGCTGCCTCGACATCGACGCTG CCAAGAGCGATATACTCCTCTCCGTTTGCTGAGATGGATGCCCTGTTACA GGGCTGTATCGTTTGGGTAATCGATGACGACTTAGCGATTATAGAAGGCA TGCAGGCGCTGCTGAGTAGTTGGGGCTGCCGGGTGCGGGCAGCCGCCACG GTGAGTGCTTTGGATGCCGCCAGTGATGGCGAGCGCCCAACGGTACTACT GGTGGATTACCATTTGGGTGAGCATCGCGAAACCGGCATTGATCTGGCAG CGCGGCTGCAGCGCCGCTACCCCGGCTTGGCGGCAGTGGTGATTACGGCT AATCACGAGGCGGAAATTAAGCGCGCGACCCGTGAGGCAGGTATGCACTG TTTGCTTAAACCGCTAAAACCGCTGCGGCTGCGCATGCTGCTTGGGACGT TGCTTAGTAAATCCTAA
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig14999:3..719+

>mRNA_E-siliculosus-1a_F_contig14999.2897.1 ID=mRNA_E-siliculosus-1a_F_contig14999.2897.1|Name=mRNA_E-siliculosus-1a_F_contig14999.2897.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1434bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig14999:3..719+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CGCTATACCGAGCAAGGCCGTGTGCTGCTGGGTTGTCGACGGCGCCATAA
TGGATTGGAAATCATGGTAGGCGATACAGGCCCCGGTATTCCAGAGCAGC
AACGCGAAGCAATCTTTCTAGAGTTCTCACGCGTTAACCAGCCACAAAGT
GCGCATAGCCGTGGCTTAGGACTAGGACTGGCCATCGTTGACCGCATTAG
CAGCATGCTGGAGCACCCTGTATCGCTGGCCTCTCGCCCGGGGGTAGGCG
CACTGTTCTCAATCACTGTGCCTTACGCGGCTGCCTCGACATCGACGCTG
CCAAGAGCGATATACTCCTCTCCGTTTGCTGAGATGGATGCCCTGTTACA
GGGCTGTATCGTTTGGGTAATCGATGACGACTTAGCGATTATAGAAGGCA
TGCAGGCGCTGCTGAGTAGTTGGGGCTGCCGGGTGCGGGCAGCCGCCACG
GTGAGTGCTTTGGATGCCGCCAGTGATGGCGAGCGCCCAACGGTACTACT
GGTGGATTACCATTTGGGTGAGCATCGCGAAACCGGCATTGATCTGGCAG
CGCGGCTGCAGCGCCGCTACCCCGGCTTGGCGGCAGTGGTGATTACGGCT
AATCACGAGGCGGAAATTAAGCGCGCGACCCGTGAGGCAGGTATGCACTG
TTTGCTTAAACCGCTAAAACCGCTGCGGCTGCGCATGCTGCTTGGGACGT
TGCTTAGTAAATCCTAACGCTATACCGAGCAAGGCCGTGTGCTGCTGGGT
TGTCGACGGCGCCATAATGGATTGGAAATCATGGTAGGCGATACAGGCCC
CGGTATTCCAGAGCAGCAACGCGAAGCAATCTTTCTAGAGTTCTCACGCG
TTAACCAGCCACAAAGTGCGCATAGCCGTGGCTTAGGACTAGGACTGGCC
ATCGTTGACCGCATTAGCAGCATGCTGGAGCACCCTGTATCGCTGGCCTC
TCGCCCGGGGGTAGGCGCACTGTTCTCAATCACTGTGCCTTACGCGGCTG
CCTCGACATCGACGCTGCCAAGAGCGATATACTCCTCTCCGTTTGCTGAG
ATGGATGCCCTGTTACAGGGCTGTATCGTTTGGGTAATCGATGACGACTT
AGCGATTATAGAAGGCATGCAGGCGCTGCTGAGTAGTTGGGGCTGCCGGG
TGCGGGCAGCCGCCACGGTGAGTGCTTTGGATGCCGCCAGTGATGGCGAG
CGCCCAACGGTACTACTGGTGGATTACCATTTGGGTGAGCATCGCGAAAC
CGGCATTGATCTGGCAGCGCGGCTGCAGCGCCGCTACCCCGGCTTGGCGG
CAGTGGTGATTACGGCTAATCACGAGGCGGAAATTAAGCGCGCGACCCGT
GAGGCAGGTATGCACTGTTTGCTTAAACCGCTAAAACCGCTGCGGCTGCG
CATGCTGCTTGGGACGTTGCTTAGTAAATCCTAA
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