mRNA_E-siliculosus-1a_F_contig14991.2895.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig14991.2895.1 vs. uniprot
Match: D1J791_ECTSI (Multifunctional fusion protein n=5 Tax=Ectocarpales TaxID=2877 RepID=D1J791_ECTSI) HSP 1 Score: 371 bits (953), Expect = 1.170e-129 Identity = 194/199 (97.49%), Postives = 198/199 (99.50%), Query Frame = 1
Query: 4 MLHIDAERVRELRHKTGAGMMNCKRALLESNGNFEEAIKSLREKGQASAHKKINRKTIEGIVNSYIHIGGKIGVLIEVNCETDFVARREEFQELVQNIAMQIAASPDVLYIQSSDIPEKIFLNEKEMESEKEDLINKPDEIKEKIILGRVEKTLKNLTLLNQPFIRDASITVDELIKEKISLFGENIRIKRFTRYTLGN 600
MLHIDAERVRELRHKTGAGMMNCKRALLESNGNFEEAIKSLREKGQASAH+KINRKTIEGIVNSYIHIGGKIGVLIEVNCETDFVARREEFQELVQNIAMQIAASPDVLYIQSSDIPE+IFLNEK++ESEKEDLINKPDEIKEKIILGRVEKTLKNLTLLNQP IRDASITVDELIKEKISLFGENIRIKRFTRYTLGN
Sbjct: 1 MLHIDAERVRELRHKTGAGMMNCKRALLESNGNFEEAIKSLREKGQASAHQKINRKTIEGIVNSYIHIGGKIGVLIEVNCETDFVARREEFQELVQNIAMQIAASPDVLYIQSSDIPEEIFLNEKKIESEKEDLINKPDEIKEKIILGRVEKTLKNLTLLNQPCIRDASITVDELIKEKISLFGENIRIKRFTRYTLGN 199
BLAST of mRNA_E-siliculosus-1a_F_contig14991.2895.1 vs. uniprot
Match: A0A7T8JK51_SCYLO (Multifunctional fusion protein n=2 Tax=Scytosiphon TaxID=27966 RepID=A0A7T8JK51_SCYLO) HSP 1 Score: 349 bits (896), Expect = 5.710e-121 Identity = 179/199 (89.95%), Postives = 191/199 (95.98%), Query Frame = 1
Query: 4 MLHIDAERVRELRHKTGAGMMNCKRALLESNGNFEEAIKSLREKGQASAHKKINRKTIEGIVNSYIHIGGKIGVLIEVNCETDFVARREEFQELVQNIAMQIAASPDVLYIQSSDIPEKIFLNEKEMESEKEDLINKPDEIKEKIILGRVEKTLKNLTLLNQPFIRDASITVDELIKEKISLFGENIRIKRFTRYTLGN 600
MLHIDAERVRELRHKTGAGMMNCK+ALLESNGNFEEAIKSLREKGQASA KK+NRKTIEG+VNSYIHIGG+IGVLIEVNCETDFVARREEFQELVQN+AMQIAASPDVLYIQ+ DIPE I NEK +ES KEDL NKPD+I+EKIILGR++KTLKNLTLLNQPFIRDA+ITVDELIKEKISLFGENIRIKRFTRYTLGN
Sbjct: 1 MLHIDAERVRELRHKTGAGMMNCKKALLESNGNFEEAIKSLREKGQASADKKVNRKTIEGLVNSYIHIGGRIGVLIEVNCETDFVARREEFQELVQNLAMQIAASPDVLYIQNDDIPEDIISNEKAIESGKEDLSNKPDDIREKIILGRIDKTLKNLTLLNQPFIRDANITVDELIKEKISLFGENIRIKRFTRYTLGN 199
BLAST of mRNA_E-siliculosus-1a_F_contig14991.2895.1 vs. uniprot
Match: A0A6B7EV40_9PHAE (Elongation factor Ts, mitochondrial n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7EV40_9PHAE) HSP 1 Score: 346 bits (888), Expect = 9.450e-120 Identity = 177/199 (88.94%), Postives = 192/199 (96.48%), Query Frame = 1
Query: 4 MLHIDAERVRELRHKTGAGMMNCKRALLESNGNFEEAIKSLREKGQASAHKKINRKTIEGIVNSYIHIGGKIGVLIEVNCETDFVARREEFQELVQNIAMQIAASPDVLYIQSSDIPEKIFLNEKEMESEKEDLINKPDEIKEKIILGRVEKTLKNLTLLNQPFIRDASITVDELIKEKISLFGENIRIKRFTRYTLGN 600
MLHIDAERVRELRHKTGAGMMNCK+ALLESNGNFEEAIKSLREKGQASAH+KINRKTIEG+VNSYIHIGG+IGVLIEVNCETDFVARREEFQELVQ+IAMQ+AA PDVLYI+S +IPE +FL EKE+ES K+DL NKPD+IKEKIILGRVEKTLKNLTLL+QPFI+D +ITVDELIKEKISLFGENIRIKRFTRYTLGN
Sbjct: 1 MLHIDAERVRELRHKTGAGMMNCKKALLESNGNFEEAIKSLREKGQASAHQKINRKTIEGLVNSYIHIGGRIGVLIEVNCETDFVARREEFQELVQDIAMQVAACPDVLYIKSEEIPEDVFLAEKEIESGKDDLNNKPDDIKEKIILGRVEKTLKNLTLLDQPFIKDTNITVDELIKEKISLFGENIRIKRFTRYTLGN 199
BLAST of mRNA_E-siliculosus-1a_F_contig14991.2895.1 vs. uniprot
Match: A0A0S0FB63_COSCS (Multifunctional fusion protein n=26 Tax=Laminariales TaxID=2886 RepID=A0A0S0FB63_COSCS) HSP 1 Score: 314 bits (804), Expect = 6.160e-107 Identity = 157/198 (79.29%), Postives = 186/198 (93.94%), Query Frame = 1
Query: 7 LHIDAERVRELRHKTGAGMMNCKRALLESNGNFEEAIKSLREKGQASAHKKINRKTIEGIVNSYIHIGGKIGVLIEVNCETDFVARREEFQELVQNIAMQIAASPDVLYIQSSDIPEKIFLNEKEMESEKEDLINKPDEIKEKIILGRVEKTLKNLTLLNQPFIRDASITVDELIKEKISLFGENIRIKRFTRYTLGN 600
L I + V+ELR KTGAGMMNCK+AL E+NG+FEEAIK+LR+KG A+A KK++RKTIEG+VNSYIH GGKIGVL+EVNCETDFVARREEFQELVQNIAMQIAASPDVLY+ ++DIP+++FL EKE+ESEK+DLINKPDEIKEKIILGR+EKTLKNL+LL+Q FIRD++IT+DELIKEKI+LFGENI+IKRFTRYTLG+
Sbjct: 3 LQISSALVKELRQKTGAGMMNCKKALQETNGDFEEAIKTLRQKGLAAADKKVDRKTIEGVVNSYIHAGGKIGVLVEVNCETDFVARREEFQELVQNIAMQIAASPDVLYVNTNDIPQELFLAEKEIESEKQDLINKPDEIKEKIILGRIEKTLKNLSLLDQAFIRDSNITIDELIKEKITLFGENIKIKRFTRYTLGS 200
BLAST of mRNA_E-siliculosus-1a_F_contig14991.2895.1 vs. uniprot
Match: A0A8F0JY19_9PHAE (Elongation factor Ts, mitochondrial n=2 Tax=Laminariales TaxID=2886 RepID=A0A8F0JY19_9PHAE) HSP 1 Score: 303 bits (776), Expect = 1.130e-102 Identity = 154/198 (77.78%), Postives = 180/198 (90.91%), Query Frame = 1
Query: 7 LHIDAERVRELRHKTGAGMMNCKRALLESNGNFEEAIKSLREKGQASAHKKINRKTIEGIVNSYIHIGGKIGVLIEVNCETDFVARREEFQELVQNIAMQIAASPDVLYIQSSDIPEKIFLNEKEMESEKEDLINKPDEIKEKIILGRVEKTLKNLTLLNQPFIRDASITVDELIKEKISLFGENIRIKRFTRYTLGN 600
L I + V+ELR KTGAGMMNCK+AL E+NG+F+EA+K+LR+KG A+A KK +RKTIEG+VNSYIH GGKIGVL+EVNCETDFVARREEFQELVQNIAMQIAASPDVLY+ D+P+++FL EKE+ES K+DL NKP+E+KEKIILGRVEKTLKNL+LLNQ FIR+ +ITVDELIKEKISLFGENIRIKRFTRYTLG+
Sbjct: 3 LEISSALVKELRQKTGAGMMNCKKALQETNGDFDEAVKTLRQKGLAAADKKADRKTIEGVVNSYIHAGGKIGVLVEVNCETDFVARREEFQELVQNIAMQIAASPDVLYVNIDDVPKELFLAEKEVESGKDDLSNKPEEMKEKIILGRVEKTLKNLSLLNQSFIRNQNITVDELIKEKISLFGENIRIKRFTRYTLGD 200
BLAST of mRNA_E-siliculosus-1a_F_contig14991.2895.1 vs. uniprot
Match: A0A8F0JZ93_9PHAE (Elongation factor Ts, mitochondrial n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0JZ93_9PHAE) HSP 1 Score: 302 bits (773), Expect = 3.360e-102 Identity = 151/198 (76.26%), Postives = 180/198 (90.91%), Query Frame = 1
Query: 7 LHIDAERVRELRHKTGAGMMNCKRALLESNGNFEEAIKSLREKGQASAHKKINRKTIEGIVNSYIHIGGKIGVLIEVNCETDFVARREEFQELVQNIAMQIAASPDVLYIQSSDIPEKIFLNEKEMESEKEDLINKPDEIKEKIILGRVEKTLKNLTLLNQPFIRDASITVDELIKEKISLFGENIRIKRFTRYTLGN 600
L I + V+ELR KTGAGMMNCK+AL E+NG+FE A+K+LR+KG A+A KK++RKT+EG+VNSYIH GGKIGVL+EVNCETDFVARREEFQELVQNIAMQIAASP+VLY+ S +IPE++FL EK +E+EK+DL NKP EIKEKIILGRVEKTLK L+L++Q FIRDA+IT+DELIKEKISLFGENI++KRFTRYTLGN
Sbjct: 3 LDISSTLVKELRQKTGAGMMNCKKALQETNGDFEGAVKTLRQKGLAAADKKVDRKTVEGVVNSYIHAGGKIGVLVEVNCETDFVARREEFQELVQNIAMQIAASPEVLYVNSEEIPEQVFLAEKAIEAEKDDLSNKPPEIKEKIILGRVEKTLKKLSLIDQAFIRDANITIDELIKEKISLFGENIKVKRFTRYTLGN 200
BLAST of mRNA_E-siliculosus-1a_F_contig14991.2895.1 vs. uniprot
Match: A0A8F0FAZ7_9PHAE (Elongation factor Ts, mitochondrial n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0FAZ7_9PHAE) HSP 1 Score: 296 bits (758), Expect = 6.240e-100 Identity = 151/198 (76.26%), Postives = 174/198 (87.88%), Query Frame = 1
Query: 7 LHIDAERVRELRHKTGAGMMNCKRALLESNGNFEEAIKSLREKGQASAHKKINRKTIEGIVNSYIHIGGKIGVLIEVNCETDFVARREEFQELVQNIAMQIAASPDVLYIQSSDIPEKIFLNEKEMESEKEDLINKPDEIKEKIILGRVEKTLKNLTLLNQPFIRDASITVDELIKEKISLFGENIRIKRFTRYTLGN 600
L I + V+ELR KTGAGMM+CK+AL E+N NFEEAIK LR+KG ASA KK+NRK IEG+VNSYIH GGKIGVL+EVNCETDFVARREEFQEL QNIAMQIAASPD+ Y+ +IPE+IFL EKE+E +K+DL NKPD IKEKIILGRVEKTLK L+LL+Q FIR+ +IT+DEL+KEKISLFGENI+IKRFTRYTLGN
Sbjct: 3 LDISSTLVKELRQKTGAGMMDCKKALQETNANFEEAIKILRQKGLASADKKVNRKAIEGLVNSYIHTGGKIGVLVEVNCETDFVARREEFQELAQNIAMQIAASPDIRYVNMDEIPEEIFLTEKEIELKKDDLNNKPDNIKEKIILGRVEKTLKTLSLLDQSFIRNPNITIDELVKEKISLFGENIKIKRFTRYTLGN 200
BLAST of mRNA_E-siliculosus-1a_F_contig14991.2895.1 vs. uniprot
Match: A0A109QR64_9PHAE (Elongation factor Ts, mitochondrial n=14 Tax=Sargassaceae TaxID=3014 RepID=A0A109QR64_9PHAE) HSP 1 Score: 290 bits (742), Expect = 1.700e-97 Identity = 147/199 (73.87%), Postives = 176/199 (88.44%), Query Frame = 1
Query: 1 IMLHIDAERVRELRHKTGAGMMNCKRALLESNGNFEEAIKSLREKGQASAHKKINRKTIEGIVNSYIHIGGKIGVLIEVNCETDFVARREEFQELVQNIAMQIAASPDVLYIQSSDIPEKIFLNEKEMESEKEDLINKPDEIKEKIILGRVEKTLKNLTLLNQPFIRDASITVDELIKEKISLFGENIRIKRFTRYTLG 597
++L I + V+ELR +TGAGMMNCK+AL E+NGNF+EAIK+LR+KG ASA KK++R T EG+V SYIH GGKIGVL+EVNCETDFVARREEFQELV+NIAMQIAASP+VLYI+ D+P++IF +EKEME K DL NKP+EIK KIILGRVEKTLK L+L++QPFIRD +ITV+EL+KEKISLFGENI+IKRFTRY LG
Sbjct: 1 MILEISSTLVKELREQTGAGMMNCKKALQETNGNFDEAIKNLRKKGLASADKKVDRNTSEGLVTSYIHTGGKIGVLVEVNCETDFVARREEFQELVKNIAMQIAASPEVLYIKMDDVPKEIFQSEKEMELNKNDLDNKPEEIKNKIILGRVEKTLKKLSLIDQPFIRDPNITVEELVKEKISLFGENIKIKRFTRYILG 199
BLAST of mRNA_E-siliculosus-1a_F_contig14991.2895.1 vs. uniprot
Match: Q2PQH2_FUCVE (Multifunctional fusion protein n=3 Tax=Fucaceae TaxID=3010 RepID=Q2PQH2_FUCVE) HSP 1 Score: 289 bits (740), Expect = 3.430e-97 Identity = 146/198 (73.74%), Postives = 178/198 (89.90%), Query Frame = 1
Query: 7 LHIDAERVRELRHKTGAGMMNCKRALLESNGNFEEAIKSLREKGQASAHKKINRKTIEGIVNSYIHIGGKIGVLIEVNCETDFVARREEFQELVQNIAMQIAASPDVLYIQSSDIPEKIFLNEKEMESEKEDLINKPDEIKEKIILGRVEKTLKNLTLLNQPFIRDASITVDELIKEKISLFGENIRIKRFTRYTLGN 600
L I + V+ELR KTGAGMMNCK+AL E+NGNF+EAIK+LR+KG ASA KK++RK IEG+VNSYIH GGKIGVL+EVNCETDFVARREEFQELV+NIAMQIAASP+VLY+++ DIPE+ F EKE+E +K DLINKP++I+++IILGRV+KTLK L+L++Q FIRD +ITV+ELIKEKISLFGENI+IKRFTRY LG+
Sbjct: 3 LEISSILVKELREKTGAGMMNCKKALQETNGNFDEAIKTLRQKGLASADKKVDRKAIEGLVNSYIHTGGKIGVLVEVNCETDFVARREEFQELVKNIAMQIAASPEVLYVKTDDIPEETFFAEKEIELKKNDLINKPNDIEDQIILGRVQKTLKRLSLIDQQFIRDPNITVEELIKEKISLFGENIKIKRFTRYILGS 200
BLAST of mRNA_E-siliculosus-1a_F_contig14991.2895.1 vs. uniprot
Match: A0A8F0JXQ3_9PHAE (Elongation factor Ts, mitochondrial n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0JXQ3_9PHAE) HSP 1 Score: 282 bits (721), Expect = 2.680e-94 Identity = 145/198 (73.23%), Postives = 170/198 (85.86%), Query Frame = 1
Query: 7 LHIDAERVRELRHKTGAGMMNCKRALLESNGNFEEAIKSLREKGQASAHKKINRKTIEGIVNSYIHIGGKIGVLIEVNCETDFVARREEFQELVQNIAMQIAASPDVLYIQSSDIPEKIFLNEKEMESEKEDLINKPDEIKEKIILGRVEKTLKNLTLLNQPFIRDASITVDELIKEKISLFGENIRIKRFTRYTLGN 600
L I +E V++LR KTGAGMMNCK+AL E++GNFEEAIKSLR+KG A A KK NRK IEG+++SYIH G KIGVL+EVNCETDFVARREEF EL NIAMQIAASP+V+Y+ DIP++ F E+E+E +KEDL NKP+EIKEKI+LGRVEKTLK L+LLNQ FIR+ SITV+ELIKEKI+LFGENIRIKRF RY LGN
Sbjct: 3 LEISSELVKKLREKTGAGMMNCKKALQETDGNFEEAIKSLRQKGLAFADKKSNRKVIEGLIHSYIHTGAKIGVLLEVNCETDFVARREEFHELANNIAMQIAASPEVIYVNFDDIPKEYFKAEREIELKKEDLFNKPNEIKEKIMLGRVEKTLKTLSLLNQQFIRNPSITVEELIKEKIALFGENIRIKRFIRYNLGN 200 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig14991.2895.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig14991.2895.1 >prot_E-siliculosus-1a_F_contig14991.2895.1 ID=prot_E-siliculosus-1a_F_contig14991.2895.1|Name=mRNA_E-siliculosus-1a_F_contig14991.2895.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=200bp MLHIDAERVRELRHKTGAGMMNCKRALLESNGNFEEAIKSLREKGQASAHback to top mRNA from alignment at E-siliculosus-1a_F_contig14991:128..730- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig14991.2895.1 ID=mRNA_E-siliculosus-1a_F_contig14991.2895.1|Name=mRNA_E-siliculosus-1a_F_contig14991.2895.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=603bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig14991:128..730- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig14991:128..730- >mRNA_E-siliculosus-1a_F_contig14991.2895.1 ID=mRNA_E-siliculosus-1a_F_contig14991.2895.1|Name=mRNA_E-siliculosus-1a_F_contig14991.2895.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1200bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig14991:128..730- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |