mRNA_E-siliculosus-1a_F_contig1499.2891.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1499.2891.1
Unique NamemRNA_E-siliculosus-1a_F_contig1499.2891.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1499.2891.1 vs. uniprot
Match: D7FVK8_ECTSI (Asparagine synthetase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVK8_ECTSI)

HSP 1 Score: 392 bits (1006), Expect = 2.320e-134
Identity = 200/209 (95.69%), Postives = 206/209 (98.56%), Query Frame = 1 
Query:    1 LEGGGADGAGGIVEGGRRVVLFNGTNKDDKRDTTRVGLKAAADFQVASPIGMLTKAEVRAVARELGLPNWNHAASPCLRSRLAFGVQATPERLVLVEKAEDAARRRLDLGVSHNLRVRAMHGNKALLEVDAGEILEEALRSMEDIRSLILPLGFSEVDIRPFRSGAVSGGLMTPVAEQQKESEVNTKNLNGIEVYRVHGSTAAARGAGS 627
            LEGGGADGAGGIVEGGRRVVLFNGTNKDDKRDTTRVGLKAAADFQVASPI MLTKAEVRAVARELGLPNWNHAASPCLRSRLAFGVQATPE+LVLVEKAEDAAR+RLDLGVSHNLRVRAMHGNKALLEVDAGEILEEALRS+EDIRSLILPLGF EVD+RPFRSGAVSGGL TPVAEQQKESEVNTKNL+G+EVYRVHGSTAAARGAGS
Sbjct:  139 LEGGGADGAGGIVEGGRRVVLFNGTNKDDKRDTTRVGLKAAADFQVASPIDMLTKAEVRAVARELGLPNWNHAASPCLRSRLAFGVQATPEKLVLVEKAEDAARKRLDLGVSHNLRVRAMHGNKALLEVDAGEILEEALRSIEDIRSLILPLGFGEVDVRPFRSGAVSGGLTTPVAEQQKESEVNTKNLDGVEVYRVHGSTAAARGAGS 347
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BLAST of mRNA_E-siliculosus-1a_F_contig1499.2891.1 vs. uniprot
Match: A0A7S3XS60_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XS60_HETAK)

HSP 1 Score: 165 bits (417), Expect = 1.540e-47
Identity = 91/170 (53.53%), Postives = 111/170 (65.29%), Query Frame = 1 
Query:   37 VEGGRRVVLFNGTNKDDKRDTTRVGLKAAADFQVASPIGMLTKAEVRAVARELGLPNWNHAASPCLRSRLAFGVQATPERLVLVEKAEDAARRRLDLGVSHNLRVRAMHGNKALLEVDAGEILEEALRSMEDIRSLILPLGFSEVDIRPFRSGAVSGGLMTPVAEQQKES 546
             +G  +V+LFNGTNKDD RD TR+GLKAA +F+VASP+  +TK EVR  A+ LGLPNW HAASPCLRSRLAFGV AT E L  ++KAE   RR L LG   NLRVRA +  +A + VD   +LE        I   IL LGF  V  R +R+G +SG      AEQQ+ +
Sbjct:   12 TDGKEKVILFNGTNKDDLRDDTRIGLKAAENFKVASPLAEITKDEVRLAAKALGLPNWQHAASPCLRSRLAFGVAATKENLERIDKAEAIVRRHLGLGPEVNLRVRAANPTRAAVAVDQS-LLEAVATHFPRIEEKILALGFKNVSFRAYRTGMMSG-----FAEQQQNT 175
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BLAST of mRNA_E-siliculosus-1a_F_contig1499.2891.1 vs. uniprot
Match: A0A7S2BKF9_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BKF9_9STRA)

HSP 1 Score: 165 bits (417), Expect = 6.770e-47
Identity = 94/168 (55.95%), Postives = 116/168 (69.05%), Query Frame = 1 
Query:   52 RVVLFNGTNKDDKRDTTRVGLKAAADFQVASPIGMLTKAEVRAVARELGLPNWNHAASPCLRSRLAFGVQATPERLVLVEKAEDAARRRLD-LGVSHNLRVRAMHGNKALLEVD------AGEILEEALRSMEDIRSLILPLGFSEVDIRPFRSGAVSGGLMTPVAEQ 534
            RVVL+NGTN +D+ D TRVGLKAA ++ VASPI  LTK +VR+VAR LGLPNWNHAASPCLRSRLA GV AT + L  VE+AE   R  L  + V HNLRVR +   KA++E+D      A   L E   S E  R+ IL LGF+ +++RPFRSG+VS  +  PVA +
Sbjct:   60 RVVLYNGTNAEDRMDVTRVGLKAAQNYSVASPISDLTKDQVRSVARHLGLPNWNHAASPCLRSRLALGVLATDDALRRVEEAEGLVREALPWIDVHHNLRVRTLAKKKAVVEIDHTLLDGAQATLGEGSSSAE--RAAILALGFASLEVRPFRSGSVSTPVSIPVASK 225
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BLAST of mRNA_E-siliculosus-1a_F_contig1499.2891.1 vs. uniprot
Match: A0A6V1PUF6_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PUF6_HETAK)

HSP 1 Score: 165 bits (417), Expect = 4.310e-46
Identity = 91/170 (53.53%), Postives = 111/170 (65.29%), Query Frame = 1 
Query:   37 VEGGRRVVLFNGTNKDDKRDTTRVGLKAAADFQVASPIGMLTKAEVRAVARELGLPNWNHAASPCLRSRLAFGVQATPERLVLVEKAEDAARRRLDLGVSHNLRVRAMHGNKALLEVDAGEILEEALRSMEDIRSLILPLGFSEVDIRPFRSGAVSGGLMTPVAEQQKES 546
             +G  +V+LFNGTNKDD RD TR+GLKAA +F+VASP+  +TK EVR  A+ LGLPNW HAASPCLRSRLAFGV AT E L  ++KAE   RR L LG   NLRVRA +  +A + VD   +LE        I   IL LGF  V  R +R+G +SG      AEQQ+ +
Sbjct:  127 TDGKEKVILFNGTNKDDLRDDTRIGLKAAENFKVASPLAEITKDEVRLAAKALGLPNWQHAASPCLRSRLAFGVAATKENLERIDKAEAIVRRHLGLGPEVNLRVRAANPTRAAVAVDQS-LLEAVATHFPRIEEKILALGFKNVSFRAYRTGMMSG-----FAEQQQNT 290
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BLAST of mRNA_E-siliculosus-1a_F_contig1499.2891.1 vs. uniprot
Match: A0A836CNR6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNR6_9STRA)

HSP 1 Score: 165 bits (417), Expect = 8.940e-46
Identity = 93/156 (59.62%), Postives = 106/156 (67.95%), Query Frame = 1 
Query:   40 EGGRRVVLFNGTNKDDKRDTTRVGLKAAADFQVASPIGMLTKAEVRAVARELGLPNWNHAASPCLRSRLAFGVQATPERLVLVEKAEDAARRRLDLGVSHNLRVRAMHGNKALLEVDAGEILEEALRSMEDIRSLILPLGFSEVDIRPFRSGAVSG 507
            +G  R VLFNGTN++D+ DTTRVGLKAAA++ V+SPI  LTKA+VRAVAR L LPNW+HAASPCLRSRLAFGV ATP  L  VE+AE AAR  L LG   NLRVRAM   +AL+EVDA   L                      D+R FRSGAVSG
Sbjct:  126 DGDSRNVLFNGTNQEDRSDTTRVGLKAAAEYSVSSPIDTLTKAQVRAVARALALPNWDHAASPCLRSRLAFGVAATPASLARVERAEAAARALLALGPRDNLRVRAMAAERALVEVDAAR-LXXXXXXXXXXXXXXXXXXXXXXDVRAFRSGAVSG 280
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BLAST of mRNA_E-siliculosus-1a_F_contig1499.2891.1 vs. uniprot
Match: H3GU42_PHYRM (Uncharacterized protein n=2 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GU42_PHYRM)

HSP 1 Score: 162 bits (410), Expect = 8.670e-45
Identity = 88/173 (50.87%), Postives = 116/173 (67.05%), Query Frame = 1 
Query:   52 RVVLFNGTNKDDKRDTTRVGLKAAADFQVASPIGMLTKAEVRAVARELGLPNWNHAASPCLRSRLAFGVQATPERLVLVEKAEDAARRRLDLGVSHNLRVRAMHGNKALLEVDAGEILEEALRSMEDIRSLILPLGFSEVDIRPFRSGAVSGGLMTPVAEQQKESEVNTKNLN 570
            + VL+NGTN DD+ D TRVGL AA++F V SP+  LTK EVR VA+ LGLPNWN AASPCLRSRL FGV+AT + L  VEKAED  R  + L    ++RVR + GN+A +E+D  E LE+A+  +E I + +  LGF++VD+R FRSG++SG     V E    S    +  +
Sbjct:  141 KPVLYNGTNADDQLDPTRVGLVAASEFDVVSPLSGLTKQEVRDVAKYLGLPNWNAAASPCLRSRLQFGVEATQQHLHRVEKAEDFVRGLIQLESHRSMRVRFLAGNRAAVELD-NEALEKAVAQLETIDAELRRLGFTDVDVRAFRSGSLSGYNPNAVVEHTPASSTTAREAS 312
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BLAST of mRNA_E-siliculosus-1a_F_contig1499.2891.1 vs. uniprot
Match: A0A024U4X0_9STRA (NAD_synthase domain-containing protein n=6 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U4X0_9STRA)

HSP 1 Score: 159 bits (401), Expect = 7.240e-44
Identity = 81/155 (52.26%), Postives = 107/155 (69.03%), Query Frame = 1 
Query:   58 VLFNGTNKDDKRDTTRVGLKAAADFQVASPIGMLTKAEVRAVARELGLPNWNHAASPCLRSRLAFGVQATPERLVLVEKAEDAARRRLDLGVSHNLRVRAMHGNKALLEVDAGEILEEALRSMEDIRSLILPLGFSEVDIRPFRSGAVSGGLMTP 522
            VLFNGTN DDK D TR+GL AA +FQV SP+  LTKA VR +++++GLPNWN+AASPCLRSRLAFGV A P+ L  +EKAE A R  + L    NLRVR +  N+A +E+DA  +     R ++ I+ +   LGF +  +RPF+SG++SG    P
Sbjct:  123 VLFNGTNADDKFDPTRLGLVAATEFQVVSPLENLTKASVRQISKQIGLPNWNYAASPCLRSRLAFGVAANPDHLARIEKAEHAVRSTVALTPVDNLRVRFLAHNRAAVELDAATVRALLPRQVDAIQVICKELGFDDAIVRPFKSGSLSGFSAAP 277
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BLAST of mRNA_E-siliculosus-1a_F_contig1499.2891.1 vs. uniprot
Match: D0NJX4_PHYIT (Uncharacterized protein n=16 Tax=Phytophthora TaxID=4783 RepID=D0NJX4_PHYIT)

HSP 1 Score: 156 bits (394), Expect = 1.650e-42
Identity = 85/152 (55.92%), Postives = 110/152 (72.37%), Query Frame = 1 
Query:   52 RVVLFNGTNKDDKRDTTRVGLKAAADFQVASPIGMLTKAEVRAVARELGLPNWNHAASPCLRSRLAFGVQATPERLVLVEKAEDAARRRLDLGVSHNLRVRAMHGNKALLEVDAGEILEEALRSMEDIRSLILPLGFSEVDIRPFRSGAVSG 507
            + VL+NGTN DD+ D TRVGL AA +F+V SP+  LTK EVR VA+ LGLPNWN AASPCLRSRL FGV+AT + L  VEKAE+  R  + L    ++RVR + GNKA +E+D  E LE+A+   + I + +  LGF++VDIR FRSG++SG
Sbjct:  137 KPVLYNGTNADDQLDLTRVGLVAATEFEVVSPLSGLTKQEVRDVAKYLGLPNWNAAASPCLRSRLQFGVEATQQHLHRVEKAEEFVRELVHLEPQMSMRVRFLAGNKAAVELDT-EGLEKAIPHFDVIDAELRRLGFNDVDIRAFRSGSLSG 287
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BLAST of mRNA_E-siliculosus-1a_F_contig1499.2891.1 vs. uniprot
Match: G5A0K0_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5A0K0_PHYSP)

HSP 1 Score: 156 bits (395), Expect = 1.660e-42
Identity = 85/152 (55.92%), Postives = 108/152 (71.05%), Query Frame = 1 
Query:   52 RVVLFNGTNKDDKRDTTRVGLKAAADFQVASPIGMLTKAEVRAVARELGLPNWNHAASPCLRSRLAFGVQATPERLVLVEKAEDAARRRLDLGVSHNLRVRAMHGNKALLEVDAGEILEEALRSMEDIRSLILPLGFSEVDIRPFRSGAVSG 507
            + VL+NGTN DD+ D TRVGL AA++F V SP+  LTK EVR VA+ LGLPNWN AASPCLRSRL FGV+AT + L  VEKAED  R  + L    ++RVR + GNKA +E+D  E LE+A+   + I + +  LGF  VD+R FRSG++SG
Sbjct:  146 KPVLYNGTNADDQLDPTRVGLVAASEFDVVSPLSGLTKQEVRDVAKYLGLPNWNAAASPCLRSRLQFGVEATQQHLHRVEKAEDFVRELVRLEPQMSMRVRFLAGNKAAVELDQ-EALEKAMPQFDAIDAELRRLGFDAVDVRAFRSGSLSG 296
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BLAST of mRNA_E-siliculosus-1a_F_contig1499.2891.1 vs. uniprot
Match: A0A484EI14_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EI14_BRELC)

HSP 1 Score: 155 bits (393), Expect = 2.000e-42
Identity = 85/156 (54.49%), Postives = 109/156 (69.87%), Query Frame = 1 
Query:   58 VLFNGTNKDDKRDTTRVGLKAAADFQVASPIGMLTKAEVRAVARELGLPNWNHAASPCLRSRLAFGVQATPERLVLVEKAEDAARRRLDLGVSHNLRVRAMHGNKALLEVDAGEILEEALRSMEDIRSLILPLGFSEVDIRPFRSGAVSGGLMTPV 525
            VL+NGTN DD  D+TRVGL AA++F V SP+  LTK EVR VA+ LGLPNWN +ASPCLRSRL FGV+AT + L  VE+AED  R+ + L    N+RVR + GNKA +E+D  E LE+A    + I S +  LGF+ V +R FR+G++SG   T V
Sbjct:  140 VLYNGTNADDLLDSTRVGLVAASEFHVVSPLSHLTKQEVRDVAKYLGLPNWNASASPCLRSRLQFGVEATEQHLYRVEQAEDFVRKSIRLRPQQNMRVRFLAGNKAAIELDE-EALEKAKVHFDTIASELRSLGFNAVKLRAFRTGSLSGYNATTV 294
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1499.2891.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVK8_ECTSI2.320e-13495.69Asparagine synthetase domain-containing protein n=... [more]
A0A7S3XS60_HETAK1.540e-4753.53Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2BKF9_9STRA6.770e-4755.95Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A6V1PUF6_HETAK4.310e-4653.53Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A836CNR6_9STRA8.940e-4659.62Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
H3GU42_PHYRM8.670e-4550.87Uncharacterized protein n=2 Tax=Phytophthora ramor... [more]
A0A024U4X0_9STRA7.240e-4452.26NAD_synthase domain-containing protein n=6 Tax=Aph... [more]
D0NJX4_PHYIT1.650e-4255.92Uncharacterized protein n=16 Tax=Phytophthora TaxI... [more]
G5A0K0_PHYSP1.660e-4255.92Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]
A0A484EI14_BRELC2.000e-4254.49Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1499contigE-siliculosus-1a_F_contig1499:1598..5095 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size477
Model size796
Exons5
Hectar predicted targeting categoryother localisation
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.L
Ec32 orthologEc-15_003670.1
Ec32 ortholog descriptionRossmann-like alpha/beta/alpha sandwich fold
EggNOG OGs2RYIH@2759,COG1606@1
EggNOG free text desc.tRNA processing
Seed eggNOG ortholog2880.D7FVK8
Seed ortholog evalue1.2e-77
Seed ortholog score295.8
Taxonomic scopeEukaryota
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928008.031487-UTR-E-siliculosus-1a_F_contig1499:1597..17011622928008.031487-UTR-E-siliculosus-1a_F_contig1499:1597..1701Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1499 1598..1701 +
1696318770.2186227-UTR-E-siliculosus-1a_F_contig1499:1597..17011696318770.2186227-UTR-E-siliculosus-1a_F_contig1499:1597..1701Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1499 1598..1701 +
1622928008.054091-UTR-E-siliculosus-1a_F_contig1499:2196..22451622928008.054091-UTR-E-siliculosus-1a_F_contig1499:2196..2245Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1499 2197..2245 +
1696318770.2325783-UTR-E-siliculosus-1a_F_contig1499:2196..22451696318770.2325783-UTR-E-siliculosus-1a_F_contig1499:2196..2245Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1499 2197..2245 +
1622928008.136672-UTR-E-siliculosus-1a_F_contig1499:4929..50951622928008.136672-UTR-E-siliculosus-1a_F_contig1499:4929..5095Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1499 4930..5095 +
1696318770.2793784-UTR-E-siliculosus-1a_F_contig1499:4929..50951696318770.2793784-UTR-E-siliculosus-1a_F_contig1499:4929..5095Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1499 4930..5095 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928008.0729349-CDS-E-siliculosus-1a_F_contig1499:2245..22631622928008.0729349-CDS-E-siliculosus-1a_F_contig1499:2245..2263Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1499 2246..2263 +
1696318770.242295-CDS-E-siliculosus-1a_F_contig1499:2245..22631696318770.242295-CDS-E-siliculosus-1a_F_contig1499:2245..2263Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1499 2246..2263 +
1622928008.092204-CDS-E-siliculosus-1a_F_contig1499:2802..29251622928008.092204-CDS-E-siliculosus-1a_F_contig1499:2802..2925Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1499 2803..2925 +
1696318770.2516046-CDS-E-siliculosus-1a_F_contig1499:2802..29251696318770.2516046-CDS-E-siliculosus-1a_F_contig1499:2802..2925Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1499 2803..2925 +
1622928008.1070771-CDS-E-siliculosus-1a_F_contig1499:3868..39581622928008.1070771-CDS-E-siliculosus-1a_F_contig1499:3868..3958Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1499 3869..3958 +
1696318770.2610528-CDS-E-siliculosus-1a_F_contig1499:3868..39581696318770.2610528-CDS-E-siliculosus-1a_F_contig1499:3868..3958Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1499 3869..3958 +
1622928008.121752-CDS-E-siliculosus-1a_F_contig1499:4683..49291622928008.121752-CDS-E-siliculosus-1a_F_contig1499:4683..4929Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1499 4684..4929 +
1696318770.270261-CDS-E-siliculosus-1a_F_contig1499:4683..49291696318770.270261-CDS-E-siliculosus-1a_F_contig1499:4683..4929Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1499 4684..4929 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1499.2891.1prot_E-siliculosus-1a_F_contig1499.2891.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1499 2246..4929 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1499.2891.1

>prot_E-siliculosus-1a_F_contig1499.2891.1 ID=prot_E-siliculosus-1a_F_contig1499.2891.1|Name=mRNA_E-siliculosus-1a_F_contig1499.2891.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=159bp
MLTKAEVRAVARELGLPNWNHAASPCLRSRLAFGVQATPERLVLVEKAED
AARRRLDLGVSHNLRVRAMHGNKALLEVDAGEILEEALRSMEDIRSLILP
LGFSEVDIRPFRSGAVSGGLMTPVAEQQKESEVNTKNLNGIEVYRVHGST
AAARGAGS*
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mRNA from alignment at E-siliculosus-1a_F_contig1499:1598..5095+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1499.2891.1 ID=mRNA_E-siliculosus-1a_F_contig1499.2891.1|Name=mRNA_E-siliculosus-1a_F_contig1499.2891.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=3498bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1499:1598..5095+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CTCGAGGGTGGTGGTGCTGATGGCGCCGGGGGGATAGTTGAGGGAGGGCG
AAGGGTGGTGCTGTTCAACGGCACCAACAAGGATGACAAGCGCGATACCA
CTAGGTGGGTGCTTGAGCCATCCTTCCTGTGGACTGGAGTACTGTGTTGT
TTCAGGGTATGCGACGCTGTTGGCACTTTTCTTATTGTATTCCACGTGGC
ATGGGTGTTTCTTTTCTCGAGGCAGTTCAGTGCGTGTGTACAAAAGAGGG
AACACCCAAATCGGAGTTTCCAGCATACGCTGATGCAACCCCTGCCGAAG
TTATCCTGAACACTAGACCTTCCACGCACCCAGCCCTCCCGCAATACATG
TCCCGGTGTTTACGGGATTCCAGGGTCAGTCCAAGAACTGTGGCAAGCGG
GTTCACAGTCGTAGATATCCCGTTAAACATCTCCTCCACATAACACGCCT
TGGTGCGGTCTTGTTTCCTCCTGAAGTGCCGTGTGTCCCGAGCAACAGCA
AGGGTCCACCACCCAGCGACGTCAATAGGTGATGTATATCGACCCGACCC
GACCTCGCTCGTGTGTGGGACCATATTGTTGCTGTCGTTGTTGTTGCAGG
GTTGGCCTGAAGGCTGCAGCAGACTTTCAGGTGGCAAGTCCGATAGGCAT
GCTGACGAAGGCAGAGGTGGGTGCTCCTCAGGCACTTCGGGAACTATGTC
GATGGTAACGTGTTCAGTTTGTTCAGCGGGATAGATGCTCGAGCAAAGGA
GATGTGAACTTGCACGTACACGGTGTTTTTTTTAGTGTTTGCTCAAATAC
AGGGAACGTTTTGGTATGAAGCGTAGTGCGTTTGAAAGTTCGTGCGGAAG
GATGGCTTTGGCGGTGCGTCCGGCGACGTGGTTGCAGCATCCGAAGGGCG
CGGGAGCCGTAGCCCGCTACCCATGCTAACCAGTTTGTTGCCGGTAAACT
TGAGGCGCTGAGAGAGGATAAGAAGACAAGTGTGTTGGAGGGAAGTCCGC
ATTTGCAGTCCCATCGGTGGCATATGTAAGAGTCGCAGATCTGCCAGTGG
GTCCCCGAGTTCCGACGGTGTTGACCACACGCGTCTGCCTCTGATTTTTT
TGCCTGTGAAACCTTCCTGTAGCTCGTTCCATTCACGCCCCCGTAATTCC
GTTCAAACAGTTCCTCCTTTCGTTGCTGGTGGCGTCCTGATGGTTCTCTT
TTCAGGTCCGGGCTGTTGCCCGAGAGTTGGGTCTGCCGAACTGGAATCAC
GCCGCGTCTCCGTGTCTGCGGTCGAGATTAGCCTTTGGGGTGCAGGCCAC
GCCGGAGAGGCTTGTTCTCGTCGAGAAGGTGCGTGCTGGTGCTTGCGTGG
GTCACTGGTGTGTGTGTGTGCTTGTTTAGTTGAACGTGCGTTCGTGTGTT
CTCTCAATTAGCATCGACCGCGCCAACCGACTGGCCAATGAAAAGACGCC
AGTCTTGTAGCGGGCGAGAAATGGGAACACTTTCTAATCGAAGGGTAAGG
GTAAGGGTTCTCCCGACAGAGGGGGTGCAGGAGCTGGAGGACGGTGTCCG
TTTGCGTGTGCGTGTTGTGCGTTTGCGCTTTCCTTTTGTCAAAGCGTCCG
TCCTGGCATGCCTATGTGACGACCCGCTTGGGTGGGGAGTTCTGTGTTGT
AGTCAGCTCTCCCTTAACGTTACATGAGTTTTGGTCGACAGTGCTACTTG
GTTCAAGTATAGCCTTTTGAGTCGTAACGGGAGATTCAAGTCGTAGCGGA
AAAAGGCAGACGCCCCCCTTGTCGGGCGTAGACCAGAAAACGCGCGCAGT
CTCATCGGATAAGATTCGTGTGCGTATTTGTTTTCCGTGTATACGTGGTG
CTCCTCGGCCACGCTGACCCGCTAACCCCACGGAACGTACTAACCACCGA
GACGCCTCGTTCGCACGTGGGCCCTTCTTGATACTCGTGCTTGTGTGTCA
TTTGATCATTGGTGGCGACCCTCGGAGAAACCTCTCTCTCGTCAAGATGC
GTCTGTCAGTGACGCGAACACAGCCTGTTACTTGTTTCATATTCCAGCGT
TGCCCATGCCATTGACAGAAGTTAACGCTCCCTGTTTCTGCCGGCGGGGG
AGGCAACGAGATAGCGCTTGGGCCCTGGGCATGTTCTTGAACCATCGATT
TTGCAGTTTATTGGTCGGTGTCCTCCATTTCAGCCGTGTGTGACTTGACC
ACTATTCTCGATTTCGTTGTCTCTTGGATTAATATTGAATCCGTGTCCCG
AAAATGTTAATGTTCCCACAGGCGGAAGACGCTGCACGAAGACGATTAGA
CCTGGGCGTGTCCCACAACTTGCGCGTGCGAGCCATGCACGGCAACAAGG
CCCTGCTTGAGGTGAGCATCACATACAAGCCCCCCCGCCACCCGGTCTCG
GTAGAATGCCGTGACCCAAGCGCCGACGCACGAGTCCTATCATACTCCCG
CGTATTTCCCACCAATTTTTTCAATATCGCCCATTCTGTTTCCAAGCAGA
TCCTTTTCTCTTTCTTGAGATGAAAGCGACAAGGCCCATTGGGCTATCTC
TGGGGCAGGGAGGCTGCTTTCGCACTCCTCGACGACAACGAAAGCGCCAA
TGCCGATAAAAGGGTTCTTCCGAAGATGATCGCGGTTGCTCTGCTGTTGT
GTCGTGTAGCCTCCATGTTGCGGGGGAATAGGTTGAAGGGAACAGACCCC
GCAACCTCGGAAGCTGACCCCGATTGCCAGAATATGAAAATTGGAGCGTC
TGCTGCGCATCTTTCAGTGTCCGTACCACACGGTGTTACCGTGTTTTGTT
CGTTCATATCTTATTAGCACGTGATTACATGTTGGTTGAATATAATGAGT
ATGATGCACAAATATCATCAAATGCACAAATATCTTCAAAAGAACGCTGG
GCGCACGGCGATACAGCCATCACCTTGGGGCGCTGTGTGCATCCCTGCCT
ACTGCATGACCAATATTCACAACTGGGAGCAGCATGGTGATTGTGTCGTT
TGTGTATCATCCTTTTCACCGCTGCACGCGTCACCGCTTGCGTGCGCGGC
GATATTCTCTCTCATTGTTTCACACACAAAACGCAGGTTGATGCCGGTGA
AATCCTCGAGGAAGCCTTGCGATCGATGGAGGACATCCGATCGCTGATTC
TGCCGCTGGGGTTCAGCGAGGTAGACATCCGACCCTTCCGAAGCGGGGCG
GTTAGCGGCGGCCTCATGACACCGGTAGCAGAGCAGCAGAAGGAGAGCGA
GGTCAACACGAAAAACCTTAACGGCATCGAGGTATATCGTGTGCACGGAT
CAACGGCAGCGGCGAGAGGAGCTGGATCTTGACAGTCACCGGAATTATGG
TTGATGTGTGACGTTGGTTATTGCTATCGGTTTGCTTGATGGTATTCTGC
ACCGCTATGCACGCGCACGATTCTGCATGCCTATTCAAGTCGGGCACCTA
CTCGACACGAGCGAGCAAGTCGTGTGTTTTTCTGTAATAAAAGGACAA
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1499:1598..5095+

>mRNA_E-siliculosus-1a_F_contig1499.2891.1 ID=mRNA_E-siliculosus-1a_F_contig1499.2891.1|Name=mRNA_E-siliculosus-1a_F_contig1499.2891.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=954bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1499:1598..5095+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGCTGACGAAGGCAGAGATGCTGACGAAGGCAGAGGTCCGGGCTGTTGC
CCGAGAGTTGGGTCTGCCGAACTGGAATCACGCCGCGTCTCCGTGTCTGC
GGTCGAGATTAGCCTTTGGGGTGCAGGCCACGCCGGAGAGGCTTGTTCTC
GTCGAGAAGGTCCGGGCTGTTGCCCGAGAGTTGGGTCTGCCGAACTGGAA
TCACGCCGCGTCTCCGTGTCTGCGGTCGAGATTAGCCTTTGGGGTGCAGG
CCACGCCGGAGAGGCTTGTTCTCGTCGAGAAGGCGGAAGACGCTGCACGA
AGACGATTAGACCTGGGCGTGTCCCACAACTTGCGCGTGCGAGCCATGCA
CGGCAACAAGGCCCTGCTTGAGGCGGAAGACGCTGCACGAAGACGATTAG
ACCTGGGCGTGTCCCACAACTTGCGCGTGCGAGCCATGCACGGCAACAAG
GCCCTGCTTGAGGTTGATGCCGGTGAAATCCTCGAGGAAGCCTTGCGATC
GATGGAGGACATCCGATCGCTGATTCTGCCGCTGGGGTTCAGCGAGGTAG
ACATCCGACCCTTCCGAAGCGGGGCGGTTAGCGGCGGCCTCATGACACCG
GTAGCAGAGCAGCAGAAGGAGAGCGAGGTCAACACGAAAAACCTTAACGG
CATCGAGGTATATCGTGTGCACGGATCAACGGCAGCGGCGAGAGGAGCTG
GATCTTGAGTTGATGCCGGTGAAATCCTCGAGGAAGCCTTGCGATCGATG
GAGGACATCCGATCGCTGATTCTGCCGCTGGGGTTCAGCGAGGTAGACAT
CCGACCCTTCCGAAGCGGGGCGGTTAGCGGCGGCCTCATGACACCGGTAG
CAGAGCAGCAGAAGGAGAGCGAGGTCAACACGAAAAACCTTAACGGCATC
GAGGTATATCGTGTGCACGGATCAACGGCAGCGGCGAGAGGAGCTGGATC
TTGA
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