mRNA_E-siliculosus-1a_F_contig1497.2887.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_E-siliculosus-1a_F_contig1497.2887.1
Unique Name	mRNA_E-siliculosus-1a_F_contig1497.2887.1
Type	mRNA
Organism	Ectocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)

Homology

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BLAST of mRNA_E-siliculosus-1a_F_contig1497.2887.1 vs. uniprot
Match: D7FJN9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJN9_ECTSI)

HSP 1 Score: 704 bits (1817), Expect = 6.370e-255
Identity = 337/358 (94.13%), Postives = 343/358 (95.81%), Query Frame = 1

Query:    1 MLASTLLECETPCLFPMLRVNVLAERCDGVVCGYWWKNYLSGEDGNAWFDSWNKFMQAKLDLLASIAEEREDTETEPFRVLMIGDSTMSHQFGAICGFMGEREGRRFDPEVTQRGAPGCCMDTLPKEDGGEEGGGGRGLCFQYDQFRFLDPKRPDRTSVDAYYFGSGLHLLHMYPHWPEMHPMEPLRIQSWLNYESLLEGVVEGVRAKNGQDVRVAFMTNHAIADELFTGEYKEIRAAYREGEGNATIRAECQREDNVQVRAASVGNPGEFSYTDWHGTPDIAEYITHPEGQGLFTVDTYCEEAILDRRGSLQMSRRARPVMSRLGVPIVDAAKIVEGQGWASHVNDGRHFHKLVPIE 1074
            MLASTLLECE   LF MLRVNVL E C+ VVCGYWWKNYLSGEDGNAWFDSWNKFMQAKLDLLASIAEEREDTETEPFRVLMIGDSTMSHQFGAICGFMGEREGRRFDPEV QR APGCCMDTLPKEDGGE GGGGRGLCFQYDQFRFLDPKRPDRTSVDAYYFGSGLHLLHMYPHWPEMHPMEPLR+QSWLNYESLLEGVVEGVRAKNGQDV+VAFMTNHAIADELFTGEYKEIRAAYREGEGNATIRAECQREDNVQVRAASVGNPG+F Y+DWHG PDIAEYITHPEGQGLFTVDTYCEEAILDRRGSL MSRRARPVMSRLGVP+VDAAKIVEGQGWAS  NDGRHFHKLVPIE
Sbjct:    1 MLASTLLECERLFLFSMLRVNVLGEPCNDVVCGYWWKNYLSGEDGNAWFDSWNKFMQAKLDLLASIAEEREDTETEPFRVLMIGDSTMSHQFGAICGFMGEREGRRFDPEVIQRSAPGCCMDTLPKEDGGE-GGGGRGLCFQYDQFRFLDPKRPDRTSVDAYYFGSGLHLLHMYPHWPEMHPMEPLRVQSWLNYESLLEGVVEGVRAKNGQDVKVAFMTNHAIADELFTGEYKEIRAAYREGEGNATIRAECQREDNVQVRAASVGNPGDFRYSDWHGKPDIAEYITHPEGQGLFTVDTYCEEAILDRRGSLHMSRRARPVMSRLGVPVVDAAKIVEGQGWASPANDGRHFHKLVPIE 357

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BLAST of mRNA_E-siliculosus-1a_F_contig1497.2887.1 vs. uniprot
Match: D7FJP0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJP0_ECTSI)

HSP 1 Score: 510 bits (1314), Expect = 2.080e-178
Identity = 246/307 (80.13%), Postives = 272/307 (88.60%), Query Frame = 1

Query:  244 MIGDSTMSHQFGAICGFMGEREGRRFDPEVTQRGAPGCCMDTLPKEDGGEEGGGGRGLCFQYDQFRFLDPKRPDRTSVDAYYFGSGLHLLHMYPHWPEMHPMEPLRIQSWLNYESLLEGVVEGVRAKNGQDVRVAFMTNHAIADELFTGEYKEIRAAYREGEGNATIRAECQREDNVQVR-AASVGNP-GEFSYTDWHGTPDIAEYITHPEGQGLFTVDTYCEEAILDRRGSLQMSRRARPVMSRLGVPIVDAAKIVEGQGWASHVNDGRHFHKLVPIEVASLLSVLGAPHPPGSLPDRDAAALAEE 1158
            M+GDSTMSHQ+GAICGFMGEREGRR+DPE  Q G+PGCCMDTLPKED GE GGGGRGLCF++DQFRFLDPKR  RTSVDAYYFGSGLHLLHMYPHWPEM+PMEPLR+QSWLNYESLLEGVV+ VR K+G +VRV FMTNHAIADE F GEYK+IRAAYREG GN TIRAECQ ++N QV+ AASV +  G+FSY+DWHG PDIAEY+ +PEGQGLFTVDTYCEEAILDRRGSLQ+SRRARPVMSRLGVP+VDAA+IVEGQGWAS+ +DGRHFHK+VPIEV  LLSVLGAP  P SL  RD A L  E
Sbjct:    1 MVGDSTMSHQYGAICGFMGEREGRRYDPEKAQHGSPGCCMDTLPKEDEGE-GGGGRGLCFEFDQFRFLDPKRAARTSVDAYYFGSGLHLLHMYPHWPEMYPMEPLRVQSWLNYESLLEGVVQAVRYKSGPNVRVVFMTNHAIADERFQGEYKDIRAAYREGPGNTTIRAECQDQNNTQVKQAASVKDAHGDFSYSDWHGAPDIAEYMVYPEGQGLFTVDTYCEEAILDRRGSLQLSRRARPVMSRLGVPLVDAARIVEGQGWASNPSDGRHFHKIVPIEVVDLLSVLGAPPAPPSLTGRDPAELTVE 306

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BLAST of mRNA_E-siliculosus-1a_F_contig1497.2887.1 vs. uniprot
Match: D7FKK9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKK9_ECTSI)

HSP 1 Score: 370 bits (950), Expect = 1.090e-125
Identity = 176/190 (92.63%), Postives = 178/190 (93.68%), Query Frame = 1

Query:    1 MLASTLLECETPCLFPMLRVNVLAERCDGVVCGYWWKNYLSGEDGNAWFDSWNKFMQAKLDLLASIAEEREDTETEPFRVLMIGDSTMSHQFGAICGFMGEREGRRFDPEVTQRGAPGCCMDTLPKEDGGEEGGGGRGLCFQYDQFRFLDPKRPDRTSVDAYYFGSGLHLLHMYPHWPEMHPMEPLRIQS 570
            MLASTLLECE   LF MLRVNVL E C+ VVCGYWWKNYLSGEDGNAWFDSWNKFMQAKLDLLASIAEEREDTETEPFRVLMIGDSTMSHQFGAICGFMGEREGRRFDPEV Q  APGCCMDTLPKEDGGE GGGGRGLCFQYD FRFLDPKRPDRTSVDAYYFGSGLHLLHMYPHWPEMHPMEPLR+QS
Sbjct:    1 MLASTLLECERLFLFSMLRVNVLGEPCNDVVCGYWWKNYLSGEDGNAWFDSWNKFMQAKLDLLASIAEEREDTETEPFRVLMIGDSTMSHQFGAICGFMGEREGRRFDPEVIQGRAPGCCMDTLPKEDGGE-GGGGRGLCFQYDHFRFLDPKRPDRTSVDAYYFGSGLHLLHMYPHWPEMHPMEPLRVQS 189

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BLAST of mRNA_E-siliculosus-1a_F_contig1497.2887.1 vs. uniprot
Match: D7FKK8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKK8_ECTSI)

HSP 1 Score: 282 bits (722), Expect = 7.130e-92
Identity = 134/141 (95.04%), Postives = 137/141 (97.16%), Query Frame = 1

Query:  652 MTNHAIADELFTGEYKEIRAAYREGEGNATIRAECQREDNVQVRAASVGNPGEFSYTDWHGTPDIAEYITHPEGQGLFTVDTYCEEAILDRRGSLQMSRRARPVMSRLGVPIVDAAKIVEGQGWASHVNDGRHFHKLVPIE 1074
            MTNHAIADELFTGEYKEIRAAYREGEGNATIRAECQREDNVQVRAASVGNPG+F Y+DWHG PDIAEYITHPEGQGLFTVDTYCEEAILDRRGSLQMSRRARPVMSRLGVP+VDAAKIVEGQGWAS  NDGRHFHKLVPIE
Sbjct:    1 MTNHAIADELFTGEYKEIRAAYREGEGNATIRAECQREDNVQVRAASVGNPGDFRYSDWHGKPDIAEYITHPEGQGLFTVDTYCEEAILDRRGSLQMSRRARPVMSRLGVPVVDAAKIVEGQGWASPANDGRHFHKLVPIE 141

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BLAST of mRNA_E-siliculosus-1a_F_contig1497.2887.1 vs. uniprot
Match: D7FJP2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJP2_ECTSI)

HSP 1 Score: 227 bits (578), Expect = 3.930e-69
Identity = 111/171 (64.91%), Postives = 130/171 (76.02%), Query Frame = 1

Query:  172 AKLDLLASIAEEREDTETE-PFRVLMIGDSTMSHQFGAICGFMGEREGRRFDPEVTQRGAPGCCMDTLPKEDGGEEGGGGRGLCFQYDQFRFLDPKRPDRTSVDAYYFGSGLHLLHMYPHWPEMHPMEPLRIQSWLNYESLLEGVVEGVRAKNGQDVRVAFMTNHAIADEL 681
            AKLD+LA++ E ++    E PFRVLM+GDSTM HQ+GA+CGFMGER GRR++P                      E GGGRGLCF+ DQ RFLDPKR   TSVDAYYFGSGLHLLHM PHWPEM+PMEPLR+QSWLNYESLLEGVV+ VR K+GQ+V++ FMTNHAIAD+L
Sbjct:   63 AKLDVLAALVENQQGGRREQPFRVLMVGDSTMRHQYGALCGFMGERGGRRYNPR---------------------EEGGGRGLCFELDQLRFLDPKRAGETSVDAYYFGSGLHLLHMLPHWPEMNPMEPLRVQSWLNYESLLEGVVQAVRKKSGQNVKLIFMTNHAIADQL 212

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BLAST of mRNA_E-siliculosus-1a_F_contig1497.2887.1 vs. uniprot
Match: D7G0U4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0U4_ECTSI)

HSP 1 Score: 223 bits (569), Expect = 3.340e-64
Identity = 153/399 (38.35%), Postives = 200/399 (50.13%), Query Frame = 1

Query:    4 LASTLLECETPCLFPMLRVNVLAERCDGVVCGYWWKNYLS-GEDGNAWFDSWNKFMQAKLDLLASIAE-EREDTET---------EPFRVLMIGDSTMSHQFGAICGFMGEREGRRFDPEVTQRGAPGCCMDTLPKEDGGEEG------------------GGGRGLCFQYDQFRFLDPKR-PDRTSVDAYYFGSGLHLLHMYPHWPEMHPMEPLRIQSWLNYESLLEGVVEGVRAKNGQDVRVAFMTNHAIADELFTGEYKEIRAAYREGEGNATIRAECQREDNVQVRAASVGNPGEFSYTDWHGTPDIAEYITHPEGQGLFTVDTYCEEAILDRRGSLQMSRRARPVMSRLGVPIVDAAKIVEGQGWASHVNDGRHFHKLVPIEVASLLSVLGAPH 1110
            LAS L  C    +  M R  V A+  +  + G  WKN+LS G  G+ WF  WN   Q ++D +A++AE ER   +          +PFRV M+GDSTM  Q G IC F+ ER G  FD    Q     CC+DTLP+E   E G                  GGGRG+CF++   +FL+P +     S DA YFG GLHLL        M  ME  R Q+WL YE  LE  VE  RA  G   R+ F T+H I D ++ G ++E+  AYR+G+     + E Q      VR                             G G   VD YC   ++DR GS  ++RR+RPVMSRLGVP V+   IV+ Q WA+  +DGRH+H LVP+EV   L VL +P+
Sbjct:  149 LASVLAACG---VLVMHRAGVDAQP-EKYMSGARWKNFLSSGVSGDTWFTRWNSMAQPRIDKVAALAEAERNGGDASXXXXXXTQQPFRVAMVGDSTMMQQHGVICAFLAERAGSLFDAAGHQ---DECCIDTLPREPAEEGGDANDHGTPALDLGNHTANGGGRGVCFRHSFQKFLEPPQWASLGSPDAVYFGRGLHLL-------PMDNMEGERAQAWLTYERDLENAVETYRAAGGAGFRLVFTTSHTIQDSVYQGLFREMVDAYRDGDMGVISKCEGQ------VR----------------------------RGYG---VDAYCRLGLMDRNGSEVLNRRSRPVMSRLGVPFVEGDLIVKDQEWATPKSDGRHYHMLVPVEVWEFLGVLISPY 496

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BLAST of mRNA_E-siliculosus-1a_F_contig1497.2887.1 vs. uniprot
Match: A0A6H5JXH8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXH8_9PHAE)

HSP 1 Score: 158 bits (400), Expect = 1.230e-40
Identity = 119/348 (34.20%), Postives = 157/348 (45.11%), Query Frame = 1

Query:   67 LAERCDGVVCGYWWKNYL-SGEDGNAWFDSWNKFMQAKLDLLASIAEEREDT----------ETEPFRVLMIGDSTMSHQFGAICGFMGEREGRRFDPEVTQRGAPGCCMDTLPKE------DGGEEG-----------GGGRGLCFQYDQFRFLDPKRPDRT-SVDAYYFGSGLHLLHMYPHWPEMHPMEPLRIQSWLNYESLLEGVVEGVRAKNGQDVRVA-----------FMTNHAIA--------------DELFTGEYKEIRAAYREGEGNATIRAECQREDNVQVRAASVGNPGEFSYTDWHGTPDIAEYITHPEGQGLFTVDTYCEEAILDRRGSLQMSR 948
            L  + D  + G  WKN+L SG  G+ WF  WN  +Q ++D LA++AE   +             +PFRV MIGDSTM  Q G IC F+ ER G  FD    Q     CC+DTLP+E      D  + G            GGRG+CF+    +FL+P   +   S DA YFGSGLHLLHM       H ME  R Q WL YE  LE  VE  RA  G   R             F   HA++              D ++ G ++E+  AYR+G+              V+V +   G   +           +A  +T PEG G   VD YC   ++DR GS  ++R
Sbjct:   88 LDAQSDKYMSGAQWKNFLESGVGGDTWFTRWNAMVQPRIDKLAALAETERNWGDASSSGGRGTQQPFRVAMIGDSTMMQQHGVICAFLAERAGSLFDAAGHQ---DECCIDTLPREPAEEGEDANDHGTPALDLHNHTVNGGRGVCFRRSFQKFLEPPEWESLGSPDAVYFGSGLHLLHM-------HVMEAERAQGWLTYERDLESAVETYRAAGGAGFRGQLQESLTIHAHFFSRMHAVSPRSTSVWVATGGSVDSVYQGLFREMVDAYRDGD--------------VEVISKCEGKMSQ-----------LAAGVTGPEGYG---VDAYCRLGLMDRNGSEVLNR 397

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BLAST of mRNA_E-siliculosus-1a_F_contig1497.2887.1 vs. uniprot
Match: D7FP29_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP29_ECTSI)

HSP 1 Score: 87.4 bits (215), Expect = 6.210e-16
Identity = 59/206 (28.64%), Postives = 92/206 (44.66%), Query Frame = 1

Query:  481 AYYFGSGLHLLHMYPHWPEMHPMEPLRIQSWLNYESLLEGVVEGVRAKNGQDVRVAFMTNHAIADELFTGEYKEIRAAYREGEGNATIRAECQREDNVQVRAASVGNPGEFSYTDWHGTPDIAEYITHPEGQGLFTVDTYCEEAILDRRGSLQMSRRARPVMSRLGVPIVDAAKIVEGQGWASHVNDGRHFHKLVPIEVASLLSVL 1098
            A YFG G+HLLH++P   +     P  + SW NY++LL   + G R  N  D+++ +MT H I +  + GE+K     Y+                    R      P +  +          E I   E      ++  C + +    G   ++ +   VM  +GVP+V A  +VEGQ WA+   DGRHF  L P+E+  L ++L
Sbjct:   75 AMYFGCGMHLLHLFP--VQESADVPRAMLSWENYDTLLSERIGGWREVN-PDIKLVYMTTHTIDESKYYGEWKTALEGYK-------------------ARDPVFLEPCKLKF----------EEILPSESPLRDDLEQVCIDTVFGAHGVQLLNEQGLAVMKEMGVPVVPAHMLVEGQQWATPDGDGRHFPYLTPLELFWLFNIL 248

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_F_contig1497.2887.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_F_contig1497.2887.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 8


Match Name	E-value	Identity	Description
D7FJN9_ECTSI	6.370e-255	94.13	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D7FJP0_ECTSI	2.080e-178	80.13	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D7FKK9_ECTSI	1.090e-125	92.63	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D7FKK8_ECTSI	7.130e-92	95.04	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D7FJP2_ECTSI	3.930e-69	64.91	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D7G0U4_ECTSI	3.340e-64	38.35	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JXH8_9PHAE	1.230e-40	34.20	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FP29_ECTSI	6.210e-16	28.64	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_F_contig1497	contig	E-siliculosus-1a_F_contig1497:14615..20371 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female	2021-02-24

Properties


Property Name	Value
Start	1
Stop	1
Cds size	1230
Model size	1277
Exons	9
Ec32 ortholog	Ec-09_000540.1
Ec32 ortholog description	hypothetical protein
Hectar predicted targeting category	other localisation

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_F_contig1497.2887.1	prot_E-siliculosus-1a_F_contig1497.2887.1	Ectocarpus siliculosus Ec863f_EcPH12_90f female	polypeptide	E-siliculosus-1a_F_contig1497 14662..20371 -

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622928007.6253424-UTR-E-siliculosus-1a_F_contig1497:14614..14661	1622928007.6253424-UTR-E-siliculosus-1a_F_contig1497:14614..14661	Ectocarpus siliculosus Ec863f_EcPH12_90f female	UTR	E-siliculosus-1a_F_contig1497 14615..14661 -
1696318770.0327754-UTR-E-siliculosus-1a_F_contig1497:14614..14661	1696318770.0327754-UTR-E-siliculosus-1a_F_contig1497:14614..14661	Ectocarpus siliculosus Ec863f_EcPH12_90f female	UTR	E-siliculosus-1a_F_contig1497 14615..14661 -

The following CDS feature(s) are a part of this mRNA:

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at E-siliculosus-1a_F_contig1497:14615..20371-
coding sequence from alignment at E-siliculosus-1a_F_contig1497:14615..20371-

protein sequence of mRNA_E-siliculosus-1a_F_contig1497.2887.1

>prot_E-siliculosus-1a_F_contig1497.2887.1 ID=prot_E-siliculosus-1a_F_contig1497.2887.1|Name=mRNA_E-siliculosus-1a_F_contig1497.2887.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=410bp
MLASTLLECETPCLFPMLRVNVLAERCDGVVCGYWWKNYLSGEDGNAWFD
SWNKFMQAKLDLLASIAEEREDTETEPFRVLMIGDSTMSHQFGAICGFMG
EREGRRFDPEVTQRGAPGCCMDTLPKEDGGEEGGGGRGLCFQYDQFRFLD
PKRPDRTSVDAYYFGSGLHLLHMYPHWPEMHPMEPLRIQSWLNYESLLEG
VVEGVRAKNGQDVRVAFMTNHAIADELFTGEYKEIRAAYREGEGNATIRA
ECQREDNVQVRAASVGNPGEFSYTDWHGTPDIAEYITHPEGQGLFTVDTY
CEEAILDRRGSLQMSRRARPVMSRLGVPIVDAAKIVEGQGWASHVNDGRH
FHKLVPIEVASLLSVLGAPHPPGSLPDRDAAALAEEGTGEGEPSLSVELE
GEESHSRQP*

mRNA from alignment at E-siliculosus-1a_F_contig1497:14615..20371-

Legend: polypeptideCDSUTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_E-siliculosus-1a_F_contig1497.2887.1 ID=mRNA_E-siliculosus-1a_F_contig1497.2887.1|Name=mRNA_E-siliculosus-1a_F_contig1497.2887.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=5757bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1497:14615..20371- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGCTGGCCTCGACGCTTCTTGAGTGCGAGACGCCGTGCCTCTTCCCCAT
GCTGCGCGTTAACGTGACCTCTTCTCTATGCCGCTCGTTGCTCTCAACTT
AACAGCGTGTGAAGAGCACACGCACCGCTAGACGCGATACACAGCGGTCA
GCACCGTTTTTTTATATCGGGGTCTCTGCACCACCACCACGACCCCGCCG
ATTGCCGCTGTTTTTGTTCGACACAGGTGCTAGCCGAGCGTTGCGACGGG
GTCGTGTGCGGCTACTGGTGGAAGAACTACCTCTCTGGCGAGGACGGCAA
CGCCTGGTTTGACTCTTGGTGAGAAGGCCACCCATGGCTCGGGAGTTTTT
TTTTGTTTGTTTTGTCAGTATGACCCAACGAATCCATCTCTATGCAAGAA
AAAGAGTCTAAGATAGATTAGCAATGAATCCATAGCGTCAGCGAAAGTTC
TGGTTTTCAGCGTACACCACACACACACCTCGTCTCTATCTCCACCACGT
AATACCTTGCCAACGCTGCCTTCCATTGGCCTCCTGCAAACCCGGCCCTC
CCCCCCCGAAAACAATACAGGTAGCGCTACTCGCACTTCAGCAACTCTAG
TTTTGGTCGCGTCTGTGTTTCGTTGTTCCTCTTGTGGGCTGCAAATTGCC
GCCATGTATATAGGTTTTAGTATGGGTATCTTGATCGTGCTCACCAACGG
CACTCTGTGTTTCGATGTACTGTCGACATGAAGTTCTTAAGCTGCCACGT
TCTGTTTTTATGTGCGGGCGTTCCGTGTCTGTGAAATCGCTGGCATCATC
GGCAGGAATAAGTTCATGCAGGCCAAGCTAGACCTGCTGGCTTCCATCGC
GGAGGAAAGGGAGGACACAGAGACCGAGCCCTTCCGCGTCCTGATGATCG
GGGACAGTACGATGAGCCACCAGTTCGGCGCCATCTGCGGCTTCATGGGC
GAGAGAGAGGGACGGCGATTCGATCCCGAGGTGTGTGTGTGTTTCATTTT
TTTCGTTAGCGTCGACCGCGCTAGCCAACGACAAGACGTCAGTCTCGGTG
CGGTTGAAAAAATTGGGTTCTAGAGGTCATGATATTGGTGTGGGTGAGAT
GTGTGTTTGGTGTTGCTTGTGTATTGTTGTCCCTTTGTTCGAGCGTGCTT
CGGGATGCAGGTGCAGGTCGTCTGCGTTACCTGTACCCCGTACGGGCTCT
TTTTTGTGTTGTTTTGGGGTGGTGACGGCTCAAGGAACACAGGAACCAAG
TATTCCATCTAGTTGTTTTTTGGAAAGCTCGGTAAGAGCACCCGTGGGGC
TTTCGTTGTTCAGACTCCAATTATCCCTCTTTACTGCCTTGTTTATTGCT
CTTCGTGTTCTCCGTCTTGCATCTCTGTCTGTCTGTCTCTTCTCTACATA
TACCGCGCCGGAGAGAGACAGATATTTCTCATTACTGTCTAGAGGATTGA
GGATAGAGATGAACGTGAAAACCTACGCAAAGCCAACCAGCAATGACTTT
GCTGTTTGACGCCCCCCCCTCCCCCCTCAGGTGACTCAACGCGGGGCCCC
CGGTTGCTGCATGGACACGTTGCCGAAAGAGGACGGAGGAGAAGAAGGAG
GAGGAGGGCGGGGGCTTTGTTTCCAGTATGACCAGTTCCGCTTCCTTGAT
CCCAAGAGGCCGGACAGGACGTCGGTGGATGCCTACTACTTCGGCAGCGG
TCTCCACCTGCTGCACATGTACCCGCACTGGCCGGAGATGCACCCCATGG
AACCGCTGCGAATACAATCGTGAGACCTTCGGGTTGGGGTTAGGGTTTGG
GACAGACCCTTGTTTCGGATAGATGGGGAGGAGCTTGAGCTGCGGGGGGG
GGGGGTACTCATAGTCGTTCATGCCGTAGTCGTTAGATCGTTGACCTCGC
ATCCCTACGAAGCCGGGACGGAGCACGCCGGGAGGGGAATGATGCCGTTC
TGTGTCGGGTTATGACGGCCGGCGGAAGAGGAGAGGAGAGGAGATGAAGC
CGTGTTTTTTGGTCTTGACGAGCTTTCGTTGCCGGGAAAAGGCTTCAGGG
GTTGAAAGGGGGGGCACAGCAGGATGCCGCTTTGCTGCCTGCGACCGATC
GACCGAGATACATGTATAGCAGCGGCTACGGTTTGAGAAAGGGTGTGGAC
ACCACAACTCTTTTATCCGGGTTTCTCTAAACACGTGCTTCTGTGTAGAT
TTTGTGTTTCTTTTGTGTTTCTCATGGTCGGAACCAGCCGAATCCATGAT
ATTCAATCCGATTTCCTTCCTCTGAAGTATTCTCTCAAGGGCAGCCGCTA
GTGCTGTGTGTGTGAGTTGGGGAAAGCGGGGGGTGGGACCATGACGCTGC
CTGTGCGGAGAAACGGAAGGGCAGACCGGGCGTTAAACTCGCGTGTTTCA
TGCCTGCATAGCGCACACGGGGGGGAGGTTTTCACTGTCCCTTCACCCTT
CCGTACGATTCCGTAGGAGATGTGTCGATGTGTTCCAGTGAGCAAAACAT
TTCTATTCATACATTGAAAGATAGACTACCCGTTCGAGATAATACAACAG
TCGAAGGGGCGGGTTGAAGTCTTTACATAACAAATGCCTGGACGTTCTCT
TACTGTTTTGGGTTTGTTGACCATTTTTTAATGTTTTACGTAGTCTTCGG
GGAGGAACGTAGGCAGGCAGGCGGGGGTACCCTCGCCACTTTTCGCTCTC
CCATCCGCGTATCCCCCCGTCCTCTTGGTAGATGACAAGAAAAACAGCCT
CTCGGTGGTGCTCGAGGACAGGCAGGTCATCGATATTTGTGCCTCAGAAA
AAACGTTTTGACGTGCGTAAACCCTTCGTCTCAATAGTTTTCTCTGTCTG
GCTTGCATGTCCGCTGACTCGTGTCCTTGCAGGTGGTTGAATTACGAGAG
TCTTCTCGAGGGAGTCGTCGAGGGCGTTCGTGCGAAGAACGGGCAGGATG
TGAGGTGAGCATTTTCATTCCGAGATTTCTTGTCGGAGGTCGTTTTCGTC
CGTCCCGCTCAGGGCTAGCGCTAGGACCAAATTGGCGATCGTCGAAAGAA
GTGAAATTCACCCCGATTGTTTTCGGCCTTTGCCAGATTCGCTTTCATGA
AAAACCACGCCATCGCCGACGATGTTTTTTTGTGTTTTTGTAAATGCTCT
TTTCGGCCTTCAGCAGATTCGCGATTATGGCGAACCACGCCATCGCCGAC
AGCTAGAATTTGTGTTTTTTGTTTTTAAGTTTTCGATGTCTTTTTTCGGC
CGTCACCAGAATCGCTATCACGACAAACCACGCCATCGCCGCCAACGCTA
CATTGCGTTTATTTTTTTTTGCATTTCTTCGGCCATCACCAGAGTCGCTT
TCATGACGAACCACGCCATCGCCGACGAGCTATTTACAGGCGAGTACAAA
GAGATTCGTGCCGCCTACAGGGAAGGAGAGGGGAACGCCACCATCCGGGC
GGAGTGCCAAAGAGAGGTATACTACCGTGTGGAAGGGGCATCGTTTTTTG
CAGCTAGTTGGTCCAGCAAACGTTCAACTGAGGACAGGCTGTTGCTGCCG
CTACTATCCTATTTTCTTATTCTGTGGTAGAAAAATCTTGCTAATTTTAT
CTTTTTCTACTGTTTACCTACATGTTATTCTGTGGTAGAAAAATCTTGCT
AATATATTATCGTTTTTGTGCTTGCGTGGAAAAATCGAAGTTAGTGGTTG
TCTCGCAGGCCCGCCTGACTTGGCTCGACCGCTTCTCCCTTCTCTCCAAC
CTCTCCGGGATCGATGTCTGGTTGCGGGGGTTGGTTGCCTCCAGACATGC
ACCGCCAACGAAAACGATTTTAGGTATCGTGCCCGGTCCGATGAGAACCC
GGCGTGCTCCGTCGCGGCGTTGTAGGGATGCGAGATCAATGGTCAAACGA
CTACGACTACGGCGTGCACGACTATGAGTACCCCCACCCCCCCCTTTTTT
TGTTTTTTTGTCGCGCAGGACAACGTCCAAGTCAGGGCCGCATCCGTCGG
AAATCCTGGCGAATTTAGCTACACCGATTGGCACGGAACACCCGACATCG
CCGAGTACATTACCCACCCTGAGGGACAGGGGCTGTTTACCGTGGACACC
TACTGCGAGGAGGCCATCTTGGATCGACGGGGCTCCCTACAGATGAGCAG
GTAGGGTGACAACGACGGTGGTTCAGCAGGGCAAGTCGCCTTTTAGGGTT
TAGCTTCAACGGCGCTGACCGTTGGAAAATAGCCAGTCTTCTCAGTGAGG
GCAACGTGTGCACGCCATGTGCCTGCTAGCATCACGTTGGATGAACATCC
TATTTATTTAAGCCCTGTCCCAAACGGATGCCCTCCCTCCGTGCCTCTCC
GGCTCGGTTTGCGGGTTTACCGTGGCCCCGGCAAGACTGAATGCTCCCGT
TCCGTAGCTGTCAGGCTTTGTACGCGGGTTCAATGATACCAGGGTATTAA
GACCGTATTTTTTCTTCTTCGGTTTCTTTTTGTGCTCTATTGCCGCGATG
GTGATGGTGTTTCCTCTTTCGGGGTTGCTACTCAGCGCTTGGAAGAGTTT
TTCCTTCCGATTCTCGAGCTAGCCCCGCACCTACCTCTAAGTCAGCAAGT
GGCCCTTGCTGCGAAACCACCGTTCACTCCCGCTTGAAGACCCCCTATAT
CCTTCGAGCTAGCCCGCTTGGCATTACACCCAACCCCGCACGACCTCATG
TGCTCCGACAAAAATCAGGCGAGCCCGGCCGGTCATGTCTCGTCTTGGGG
TGCCTATCGTGGACGCGGCGAAGATAGTGGAGGGGCAGGGGTGGGCATCT
CACGTAAATGACGGGAGGCACTTCCACAAGCTGGTGCCGATAGAGGTGAG
TGTGTATTCATTCATGTTACCCCCTGTAGGATTGTTACTGTGTTCCCCCG
ATCGTGTCAGTTTCGGCTGTTGTTGTACAGAACAAATCGTGTTGATTGGT
TTTGCCTGCGTCCAAGGGGGTGGGTGGGTGGTTCCACCGGACGTCGCGAG
AAGAGGCGACATACACATTCGTTACGGTTCGGGCTACAAGTCAAGTCCCA
CCTCATTCCTTCCTTCTGTGTCGGACTGAAGCTGCGCAGGTCGCCTCGCC
TCGAATGCAACGCGTATTGAGCAGGATTCCTTAGGGTCCCCCTTTGTTGA
CTAAGTTCACAACGACGGTATGTGCTGGTGCTTATATTGTAGTGTCTTCC
TCAGGGAACTTCTGCCGACCGGTGTCGCCCTGCGCCAGACAAGCTGTCCG
CCATGCCGGCAGCTCGCACAAGATACCACGCCTAATTCCGGCACCGATTT
GCACGACTCGATTACCCTGCAGCGACCGCTGTATCAAGAGTGTCGGCGCT
GAAACCGTCTAGTCGAGTTTCTCCCCCCGAAAACGTACGGTTTGAGCAGA
TTTCCAAAGCTTTCGAGAAACAGAAAGCGGCGGAGCTAAAACCGTTTCAT
GTAGTCGAGGTATTTTCCGAAAATGTGCACACGATAATGGGCAGAGTTTT
CAATGCTCAGAGCCACAACAGCAGCACCGAAGACCACCGCGTTCGATGCT
GCAGGTGGCCAGCCTCTTGAGCGTTCTCGGAGCGCCACATCCGCCGGGCA
GTCTCCCTGATAGAGATGCAGCAGCGCTGGCGGAAGAGGGGACGGGGGAG
GGAGAACCAAGTCTATCAGTTGAGCTGGAAGGCGAAGAAAGTCATTCTCG
TCAACCCTGACCAGGCGGGGGGGGGGGGATCGATTCACGGAACCCCCAAA
AAGGAGG

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1497:14615..20371-

>mRNA_E-siliculosus-1a_F_contig1497.2887.1 ID=mRNA_E-siliculosus-1a_F_contig1497.2887.1|Name=mRNA_E-siliculosus-1a_F_contig1497.2887.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2460bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1497:14615..20371- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGCTGGCCTCGACGCTTCTTGAGTGCGAGACGCCGTGCCTCTTCCCCAT
GCTGCGCGTTAACATGCTGGCCTCGACGCTTCTTGAGTGCGAGACGCCGT
GCCTCTTCCCCATGCTGCGCGTTAACGTGCTAGCCGAGCGTTGCGACGGG
GTCGTGTGCGGCTACTGGTGGAAGAACTACCTCTCTGGCGAGGACGGCAA
CGCCTGGTTTGACTCTTGGTGCTAGCCGAGCGTTGCGACGGGGTCGTGTG
CGGCTACTGGTGGAAGAACTACCTCTCTGGCGAGGACGGCAACGCCTGGT
TTGACTCTTGGAATAAGTTCATGCAGGCCAAGCTAGACCTGCTGGCTTCC
ATCGCGGAGGAAAGGGAGGACACAGAGACCGAGCCCTTCCGCGTCCTGAT
GATCGGGGACAGTACGATGAGCCACCAGTTCGGCGCCATCTGCGGCTTCA
TGGGCGAGAGAGAGGGACGGCGATTCGATCCCGAGGAATAAGTTCATGCA
GGCCAAGCTAGACCTGCTGGCTTCCATCGCGGAGGAAAGGGAGGACACAG
AGACCGAGCCCTTCCGCGTCCTGATGATCGGGGACAGTACGATGAGCCAC
CAGTTCGGCGCCATCTGCGGCTTCATGGGCGAGAGAGAGGGACGGCGATT
CGATCCCGAGGTGACTCAACGCGGGGCCCCCGGTTGCTGCATGGACACGT
TGCCGAAAGAGGACGGAGGAGAAGAAGGAGGAGGAGGGCGGGGGCTTTGT
TTCCAGTATGACCAGTTCCGCTTCCTTGATCCCAAGAGGCCGGACAGGAC
GTCGGTGGATGCCTACTACTTCGGCAGCGGTCTCCACCTGCTGCACATGT
ACCCGCACTGGCCGGAGATGCACCCCATGGAACCGCTGCGAATACAATCG
TGACTCAACGCGGGGCCCCCGGTTGCTGCATGGACACGTTGCCGAAAGAG
GACGGAGGAGAAGAAGGAGGAGGAGGGCGGGGGCTTTGTTTCCAGTATGA
CCAGTTCCGCTTCCTTGATCCCAAGAGGCCGGACAGGACGTCGGTGGATG
CCTACTACTTCGGCAGCGGTCTCCACCTGCTGCACATGTACCCGCACTGG
CCGGAGATGCACCCCATGGAACCGCTGCGAATACAATCGTGGTTGAATTA
CGAGAGTCTTCTCGAGGGAGTCGTCGAGGGCGTTCGTGCGAAGAACGGGC
AGGATGTGAGGTGGTTGAATTACGAGAGTCTTCTCGAGGGAGTCGTCGAG
GGCGTTCGTGCGAAGAACGGGCAGGATGTGAGAGTCGCTTTCATGACGAA
CCACGCCATCGCCGACGAGCTATTTACAGGCGAGTACAAAGAGATTCGTG
CCGCCTACAGGGAAGGAGAGGGGAACGCCACCATCCGGGCGGAGTGCCAA
AGAGAGAGTCGCTTTCATGACGAACCACGCCATCGCCGACGAGCTATTTA
CAGGCGAGTACAAAGAGATTCGTGCCGCCTACAGGGAAGGAGAGGGGAAC
GCCACCATCCGGGCGGAGTGCCAAAGAGAGGACAACGTCCAAGTCAGGGC
CGCATCCGTCGGAAATCCTGGCGAATTTAGCTACACCGATTGGCACGGAA
CACCCGACATCGCCGAGTACATTACCCACCCTGAGGGACAGGGGCTGTTT
ACCGTGGACACCTACTGCGAGGAGGCCATCTTGGATCGACGGGGCTCCCT
ACAGATGAGCAGGACAACGTCCAAGTCAGGGCCGCATCCGTCGGAAATCC
TGGCGAATTTAGCTACACCGATTGGCACGGAACACCCGACATCGCCGAGT
ACATTACCCACCCTGAGGGACAGGGGCTGTTTACCGTGGACACCTACTGC
GAGGAGGCCATCTTGGATCGACGGGGCTCCCTACAGATGAGCAGGCGAGC
CCGGCCGGTCATGTCTCGTCTTGGGGTGCCTATCGTGGACGCGGCGAAGA
TAGTGGAGGGGCAGGGGTGGGCATCTCACGTAAATGACGGGAGGCACTTC
CACAAGCTGGTGCCGATAGAGGCGAGCCCGGCCGGTCATGTCTCGTCTTG
GGGTGCCTATCGTGGACGCGGCGAAGATAGTGGAGGGGCAGGGGTGGGCA
TCTCACGTAAATGACGGGAGGCACTTCCACAAGCTGGTGCCGATAGAGGT
GGCCAGCCTCTTGAGCGTTCTCGGAGCGCCACATCCGCCGGGCAGTCTCC
CTGATAGAGATGCAGCAGCGCTGGCGGAAGAGGGGACGGGGGAGGGAGAA
CCAAGTCTATCAGTTGAGCTGGAAGGCGAAGAAAGTCATTCTCGTCAACC
CTGAGTGGCCAGCCTCTTGAGCGTTCTCGGAGCGCCACATCCGCCGGGCA
GTCTCCCTGATAGAGATGCAGCAGCGCTGGCGGAAGAGGGGACGGGGGAG
GGAGAACCAAGTCTATCAGTTGAGCTGGAAGGCGAAGAAAGTCATTCTCG
TCAACCCTGA