mRNA_E-siliculosus-1a_F_contig1496.2884.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1496.2884.1 vs. uniprot
Match: D7G3M9_ECTSI (NUC153 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3M9_ECTSI) HSP 1 Score: 339 bits (869), Expect = 1.020e-110 Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 1
Query: 1 GKTLPQWLSEKKRRSLSKDVEYRRRIELLQDFDFPTASQKVCVSPDAQYVIVAGTYPPQIKVFEVADLSMKFERHLDCEAVDFMPLAEGYEKLAFLLADRTLAFHAGYGKHHSVRIPRFGRSLAYQRETCDMMVGCGDGEIHRFNLDQGRFRTAMTLPSGSSSSQG 498
GKTLPQWLSEKKRRSLSKDVEYRRRIELLQDFDFPTASQKVCVSPDAQYVIVAGTYPPQIKVFEVADLSMKFERHLDCEAVDFMPLAEGYEKLAFLLADRTLAFHAGYGKHHSVRIPRFGRSLAYQRETCDMMVGCGDGEIHRFNLDQGRFRTAMTLPSGSSSSQG
Sbjct: 20 GKTLPQWLSEKKRRSLSKDVEYRRRIELLQDFDFPTASQKVCVSPDAQYVIVAGTYPPQIKVFEVADLSMKFERHLDCEAVDFMPLAEGYEKLAFLLADRTLAFHAGYGKHHSVRIPRFGRSLAYQRETCDMMVGCGDGEIHRFNLDQGRFRTAMTLPSGSSSSQG 185
BLAST of mRNA_E-siliculosus-1a_F_contig1496.2884.1 vs. uniprot
Match: A0A835Z278_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z278_9STRA) HSP 1 Score: 230 bits (587), Expect = 1.570e-68 Identity = 108/158 (68.35%), Postives = 131/158 (82.91%), Query Frame = 1
Query: 1 GKTLPQWLSEKKRRSLSKDVEYRRRIELLQDFDFPTASQKVCVSPDAQYVIVAGTYPPQIKVFEVADLSMKFERHLDCEAVDFMPLAEGYEKLAFLLADRTLAFHAGYGKHHSVRIPRFGRSLAYQRETCDMMVGCGDGEIHRFNLDQGRFRTAMTLP 474
GKTLPQWL++K++R+LSKD YRRRIELLQDF+FPTASQ + +SPD Q+VIV GTYPPQ+KV+EVA+LSMKFERHLD E V L+ G+EKL FL ADRTLAFHA YG HH+VRIPRFGR LAYQ+ CD++VG E++R NLD+GR+R +TLP
Sbjct: 37 GKTLPQWLNDKQKRALSKDDGYRRRIELLQDFEFPTASQTIKMSPDGQFVIVTGTYPPQVKVYEVAELSMKFERHLDAECVAMEVLSAGFEKLVFLQADRTLAFHAAYGMHHAVRIPRFGRDLAYQQAACDLIVGGAGPELYRLNLDEGRYRAPLTLP 194
BLAST of mRNA_E-siliculosus-1a_F_contig1496.2884.1 vs. uniprot
Match: A0A024TJ26_9STRA (NUC153 domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TJ26_9STRA) HSP 1 Score: 197 bits (500), Expect = 2.380e-56 Identity = 92/155 (59.35%), Postives = 117/155 (75.48%), Query Frame = 1
Query: 1 GKTLPQWLSEKKRRSLSKDVEYRRRIELLQDFDFPTASQKVCVSPDAQYVIVAGTYPPQIKVFEVADLSMKFERHLDCEAVDFMPLAEGYEKLAFLLADRTLAFHAGYGKHHSVRIPRFGRSLAYQRETCDMMVGCGDGEIHRFNLDQGRFRTAM 465
GKTLPQWL++K R++LS+D +YRRR+ELLQDF FP +SQ+V +SPD YVI +GTYPP IKV++V DLS+KFER LD E V + L+E + KLA L DR++AFHA YG H SVRIP+ GR + Y R CD+ VG D EI+R NLDQG+F +
Sbjct: 20 GKTLPQWLAQKTRKALSRDEDYRRRLELLQDFHFPVSSQRVTMSPDGHYVIASGTYPPSIKVYDVRDLSLKFERRLDSEVVRLICLSEDFGKLALLQLDRSIAFHAPYGTHTSVRIPKAGRDMVYHRGNCDLYVGASDSEIYRLNLDQGQFLAGL 174
BLAST of mRNA_E-siliculosus-1a_F_contig1496.2884.1 vs. uniprot
Match: A0A7R9YC92_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YC92_9STRA) HSP 1 Score: 193 bits (490), Expect = 5.520e-56 Identity = 85/157 (54.14%), Postives = 118/157 (75.16%), Query Frame = 1
Query: 4 KTLPQWLSEKKRRSLSKDVEYRRRIELLQDFDFPTASQKVCVSPDAQYVIVAGTYPPQIKVFEVADLSMKFERHLDCEAVDFMPLAEGYEKLAFLLADRTLAFHAGYGKHHSVRIPRFGRSLAYQRETCDMMVGCGDGEIHRFNLDQGRFRTAMTLP 474
+ LP WLSE ++R L D ++RRR+ELL DF+FP ASQ+V +S D +Y + G YPP +K++E+ +L +K ER LDCE VDF+ L+E Y K+A LLADRTLAFHA YGKH+ +RIP+FGR L YQ +CD+++G EI+R NL++GRF+ +T+P
Sbjct: 33 RALPVWLSEGQKRKLRADDDFRRRVELLNDFEFPGASQRVKLSADGRYAVATGVYPPSVKIYELEELGLKVERRLDCEVVDFLLLSEDYSKIALLLADRTLAFHAAYGKHYELRIPKFGRCLDYQPTSCDLLLGAAGHEIYRINLEEGRFQEPLTVP 189
BLAST of mRNA_E-siliculosus-1a_F_contig1496.2884.1 vs. uniprot
Match: A0A8K1FME9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FME9_PYTOL) HSP 1 Score: 196 bits (498), Expect = 6.040e-56 Identity = 90/161 (55.90%), Postives = 119/161 (73.91%), Query Frame = 1
Query: 1 GKTLPQWLSEKKRRSLSKDVEYRRRIELLQDFDFPTASQKVCVSPDAQYVIVAGTYPPQIKVFEVADLSMKFERHLDCEAVDFMPLAEGYEKLAFLLADRTLAFHAGYGKHHSVRIPRFGRSLAYQRETCDMMVGCGDGEIHRFNLDQGRFRTAMTLPSGS 483
GKTLPQWL+EK ++SLS+D +YRRR+ELLQDF FP+ SQ+V +S D Y++ G YPP +KVF+V +LS+KFER LD E V F L+ + KLAFL ADRTLAFHA YG H+++RIP+FGR + Y RE CD+ + E++R NLDQGRF + + S +
Sbjct: 20 GKTLPQWLAEKTKKSLSRDEDYRRRVELLQDFHFPSGSQRVKMSLDGNYIVATGMYPPIVKVFDVRELSLKFERRLDSEVVQFEILSPDFGKLAFLQADRTLAFHAPYGSHYNLRIPKFGRDMCYHRENCDIYIAASASEVYRVNLDQGRFLAPLEIGSSA 180
BLAST of mRNA_E-siliculosus-1a_F_contig1496.2884.1 vs. uniprot
Match: A0A024G7Q4_9STRA (NUC153 domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G7Q4_9STRA) HSP 1 Score: 196 bits (497), Expect = 7.090e-56 Identity = 89/159 (55.97%), Postives = 116/159 (72.96%), Query Frame = 1
Query: 1 GKTLPQWLSEKKRRSLSKDVEYRRRIELLQDFDFPTASQKVCVSPDAQYVIVAGTYPPQIKVFEVADLSMKFERHLDCEAVDFMPLAEGYEKLAFLLADRTLAFHAGYGKHHSVRIPRFGRSLAYQRETCDMMVGCGDGEIHRFNLDQGRFRTAMTLPS 477
GKT PQWLSEK +RSL+KD EYR R+ELLQDF FP+ +Q++ +SPD +V+ G YPP +KV++V DLSMKFER LD + V F L+ KL FL DRTL FHA YGKH+S+RIP FGR +AY R+ CD+ V E++R NLDQG+F + +++ S
Sbjct: 20 GKTFPQWLSEKTKRSLAKDEEYRNRVELLQDFHFPSGTQRIKMSPDQNFVVATGMYPPSVKVYDVRDLSMKFERRLDAQVVQFEILSHDIGKLCFLQTDRTLTFHAAYGKHYSLRIPTFGRDMAYHRQHCDLYVAASGSEVYRVNLDQGQFLSPLSVAS 178
BLAST of mRNA_E-siliculosus-1a_F_contig1496.2884.1 vs. uniprot
Match: A0A485KJT6_9STRA (Aste57867_8214 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KJT6_9STRA) HSP 1 Score: 196 bits (497), Expect = 7.270e-56 Identity = 91/155 (58.71%), Postives = 117/155 (75.48%), Query Frame = 1
Query: 1 GKTLPQWLSEKKRRSLSKDVEYRRRIELLQDFDFPTASQKVCVSPDAQYVIVAGTYPPQIKVFEVADLSMKFERHLDCEAVDFMPLAEGYEKLAFLLADRTLAFHAGYGKHHSVRIPRFGRSLAYQRETCDMMVGCGDGEIHRFNLDQGRFRTAM 465
GKTLPQWL++K R++LS+D +YRRR+ELLQDF FP +SQ+V +SPD YVI GTYPP +KV++V DLS+KFER LD E V + L+E + KLA L DR++AFHA YG H SVRIP+ GR + Y R +CD+ VG D EI+R NLDQG+F +
Sbjct: 21 GKTLPQWLAQKTRKALSRDEDYRRRLELLQDFHFPVSSQRVTMSPDGHYVIATGTYPPSLKVYDVRDLSLKFERRLDSEVVRLICLSEDFGKLALLQLDRSIAFHAPYGTHTSVRIPKAGRDMVYHRGSCDLYVGASDSEIYRVNLDQGQFLAGL 175
BLAST of mRNA_E-siliculosus-1a_F_contig1496.2884.1 vs. uniprot
Match: W4GCA3_9STRA (NUC153 domain-containing protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GCA3_9STRA) HSP 1 Score: 195 bits (495), Expect = 1.410e-55 Identity = 90/155 (58.06%), Postives = 117/155 (75.48%), Query Frame = 1
Query: 1 GKTLPQWLSEKKRRSLSKDVEYRRRIELLQDFDFPTASQKVCVSPDAQYVIVAGTYPPQIKVFEVADLSMKFERHLDCEAVDFMPLAEGYEKLAFLLADRTLAFHAGYGKHHSVRIPRFGRSLAYQRETCDMMVGCGDGEIHRFNLDQGRFRTAM 465
GKTLPQW+++K RR+LS+D +Y+RR+ELLQDF FP +SQ+V +SPD YVI AGTYPP IKV++V DLS+KFER LD E V + L+E + KLA L DR++AFHA YG H SVRIP+ GR + Y R CD+ +G D EI+R NLDQG++ +
Sbjct: 20 GKTLPQWIAQKTRRALSRDEDYQRRLELLQDFHFPVSSQRVTMSPDGHYVIAAGTYPPSIKVYDVRDLSLKFERRLDSEVVRLICLSEDFGKLALLQLDRSIAFHAPYGTHTSVRIPKAGRDMVYHRGDCDLYIGASDSEIYRLNLDQGQYLAGL 174
BLAST of mRNA_E-siliculosus-1a_F_contig1496.2884.1 vs. uniprot
Match: F0W0F6_9STRA (Nucleolar protein 10 putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W0F6_9STRA) HSP 1 Score: 195 bits (495), Expect = 1.410e-55 Identity = 91/159 (57.23%), Postives = 114/159 (71.70%), Query Frame = 1
Query: 1 GKTLPQWLSEKKRRSLSKDVEYRRRIELLQDFDFPTASQKVCVSPDAQYVIVAGTYPPQIKVFEVADLSMKFERHLDCEAVDFMPLAEGYEKLAFLLADRTLAFHAGYGKHHSVRIPRFGRSLAYQRETCDMMVGCGDGEIHRFNLDQGRFRTAMTLPS 477
GKT PQWLSEK +RSL+KD EYR R+ELLQDF FP+ SQ++ +S D YV G YPP +KV++V DLSMKFER LD E V F L+ KL FL DRTL FHA YGKH+S+RIP FGR LAY R+ CD+ + E++R NLDQG+F + +++ S
Sbjct: 20 GKTFPQWLSEKTKRSLAKDQEYRNRVELLQDFHFPSGSQRIKMSSDQNYVAATGMYPPSVKVYDVRDLSMKFERRLDAEVVQFEILSHDIGKLCFLQTDRTLTFHAAYGKHYSLRIPTFGRDLAYHRQHCDLYIAASGSEVYRVNLDQGQFLSPLSILS 178
BLAST of mRNA_E-siliculosus-1a_F_contig1496.2884.1 vs. uniprot
Match: A0A6G0X8Q3_9STRA (NUC153 domain-containing protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X8Q3_9STRA) HSP 1 Score: 194 bits (494), Expect = 1.870e-55 Identity = 90/151 (59.60%), Postives = 115/151 (76.16%), Query Frame = 1
Query: 1 GKTLPQWLSEKKRRSLSKDVEYRRRIELLQDFDFPTASQKVCVSPDAQYVIVAGTYPPQIKVFEVADLSMKFERHLDCEAVDFMPLAEGYEKLAFLLADRTLAFHAGYGKHHSVRIPRFGRSLAYQRETCDMMVGCGDGEIHRFNLDQGRF 453
GKTLPQWL++K R++LS+D +YRRR+ELLQDF FP +SQ+V +SPD YVI +GTYPP +KV++V DLS+KFER LD E V L+E + KLA L DR++AFHA YG H SVRIP+ GR + Y R CD+ +G D EI+R NLDQG+F
Sbjct: 20 GKTLPQWLAQKTRKALSRDEDYRRRLELLQDFHFPVSSQRVVMSPDGHYVIASGTYPPSLKVYDVRDLSLKFERRLDSEVVRLTCLSEDFGKLALLQLDRSIAFHAPYGTHTSVRIPKAGRDMVYHRGNCDLYIGASDSEIYRLNLDQGQF 170 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1496.2884.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1496.2884.1 >prot_E-siliculosus-1a_F_contig1496.2884.1 ID=prot_E-siliculosus-1a_F_contig1496.2884.1|Name=mRNA_E-siliculosus-1a_F_contig1496.2884.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=167bp GKTLPQWLSEKKRRSLSKDVEYRRRIELLQDFDFPTASQKVCVSPDAQYVback to top mRNA from alignment at E-siliculosus-1a_F_contig1496:29882..31491+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1496.2884.1 ID=mRNA_E-siliculosus-1a_F_contig1496.2884.1|Name=mRNA_E-siliculosus-1a_F_contig1496.2884.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1610bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1496:29882..31491+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1496:29882..31491+ >mRNA_E-siliculosus-1a_F_contig1496.2884.1 ID=mRNA_E-siliculosus-1a_F_contig1496.2884.1|Name=mRNA_E-siliculosus-1a_F_contig1496.2884.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1002bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1496:29882..31491+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |