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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Start | 1 |
| Stop | 0 |
| Cds size | 984 |
| Model size | 984 |
| Exons | 4 |
| Ec32 ortholog | Ec-24_001690.1 |
| Ec32 ortholog description | Hypothetical protein |
| Hectar predicted targeting category | other localisation |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1496.2882.1 >prot_E-siliculosus-1a_F_contig1496.2882.1 ID=prot_E-siliculosus-1a_F_contig1496.2882.1|Name=mRNA_E-siliculosus-1a_F_contig1496.2882.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=328bp
MPPRTEPVWDILRTFESKCRTGSANRRKACEQAAAALDIGSTLFDDFDGE
FASTRPSPRYPPLGPRPPFYHHPPSETLQNCSPEEVYDLPSHPQRCCNGD
TAGAIPIMVPHLTETELPSEASPRHLVTTIALKTRSEQEQPSLNSNSYVS
EPSHGSLRGDTSGPRKYAAWRRPELSTVVVHSAAATDDSRDVVDDGNIGG
LGGPLSKPSGVEQVLAHRKWRRRANFAVSSALVLSGSMEDILVPSVPTPP
PPLGCGRGEDDPVPAVCDAIPSHTFSASSGCWDLSPGLRGSPGEEQNTVD
ERTTVVGVLQSRDEERINQHMSDGQDGA back to topmRNA from alignment at E-siliculosus-1a_F_contig1496:16442..19414+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-siliculosus-1a_F_contig1496.2882.1 ID=mRNA_E-siliculosus-1a_F_contig1496.2882.1|Name=mRNA_E-siliculosus-1a_F_contig1496.2882.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=2973bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1496:16442..19414+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGCCACCCCGCACAGAACCAGTGTGGGACATCCTCAGAACGTTCGAATC
GAAATGCCGGACTGGGTCCGCCAACCGACGGTAAGAATCTGACGGTGATC
GGAACCGTATGCAAGTGAGTGTTGTACAACTGCAGAGAGAGAGAGGATGT
ACTAGACCTAGGAATGGGCTGCAGGGGACTACTGACCGTTGTCCGCCAAT
AGAGAAGGTAAGACTGCCAGCTACGGTCGACTTTTTTTAACACACAGAAA
TCATGCCCACGTTTTCAGCGCGGCGTTCTGAATGGCATCAGCCCCCATGT
AAGCAAATCTGCGGTCACACCGAGCCCATATTGGTGGTCACCACCTCGTG
CCCGCCACGTTGACCGTAGGTTGATGCCAGACAATCAACATGAACGACCC
AAGCAAATGATGCTCACCTGTTTTTTTTAACGGGAAATTGAGGGGTCACG
TGTCTGCCAAAGCACATTCGTCTGTCTGCACGTCTGCACACACACCACAC
ACGCACCACGGTCGAAGTTCCGCCGCATGTGGCTACAATACGTGTTCGGT
CAGTCATGCGATGGTCCCAGAGTCTCTGCGCTAGAACATCTACAGAAATG
AGACACATCAGTACTTCGCTACCTTTCATTGTCAACCACATGCAATGCTT
GTGATGTGTGCACCACCAAATCCTCGCACAATGTCCTCATAATATGAAGC
TGTCAATAATCTCCGAAAGTTGGTGTCACCGACCTCAGTATTCAATCTGA
ACTCGAGGCAAATTATTTGTCAATATATTCGCGAGTTGGAGTTCTCCAAA
TACTTCCATTACGTAGTATCATATGTTTCTTTTCCACACACCTTCTGTCG
CAGCATCCAGTATTTTGGGCTTAATAACTCTTCAGCTGTTTTCCCGTCTC
CAGTTGTTTCGTCAGCCTCTTGATGTTTTTTCCCTTTGTTCTGTCGGGCG
TCTCTCGTAGCCTCTTGCTGAACCTGTAGTTCCTGTTCATCAGTTCCTTG
GTCTTCTCCTAGGTCTTCCTCTCAGATTTCGTCATGGTGTTCATCTTCTT
CATCGATAAAAAAAAATGAACTCGGGTCTAGGCCGATATCCACTGATGAT
GACCCTGCTGATATTGGGCTTGTACAGCGCAACGAACGGCAGTCCTTCGC
GCGCTGCGTTCCCATTCAGCATGTGGTTAGAGTAATGCCTGTCGTTTGAC
TAGGAGACGTTGTGGTGCGATGCACCATCTTTTGCTCCTGGTGCTAAGCG
TACTTGTACAGTTTTTCTCTCAATAATCCGGGCTACAGCCAGGCCGCGTC
GAGAGATTTCTGACGCACTCCTTGAGCATTACATCTCGCCTCCTCTCGGT
GTATCAGGACAGACTATTTGGCACCGACGAGTGTATCGAAATTCCTGCCG
ATTCCAATGTGGATCCATCTACTGTAGGTCTGACGTTTCTGTTTTGTCAC
ACATGTTAACACAGGAAAGCTTGCGAGCAAGCGGCGGCGGCCCTCGATAT
TGGCTCGACACTGTTCGACGACTTCGACGGGGAGTTTGCAAGCACTCGAC
CTTCGCCGCGGTACCCGCCGTTAGGGCCAAGGCCTCCGTTCTACCACCAT
CCACCGTCCGAAACCCTCCAAAATTGTTCACCAGAAGAAGTTTACGATCT
ACCTTCACACCCACAACGCTGTTGTAACGGCGACACTGCTGGAGCAATTC
CAATCATGGTGCCCCATCTGACGGAGACCGAATTACCTTCCGAAGCTTCT
CCGAGACATTTGGTGACAACCATTGCGTTGAAAACCCGGTCTGAACAAGA
GCAACCGTCGTTAAACTCGAACAGCTACGTTTCGGAGCCGAGTCATGGAA
GTTTGAGGGGCGATACTTCCGGTCCTAGAAAATATGCAGCATGGCGAAGA
CCCGAGCTATCGACCGTTGTCGTTCACAGTGCTGCGGCAACGGATGATAG
TCGCGATGTTGTCGATGACGGGAACATCGGTGGTCTCGGTGGCCCACTAT
CCAAGCCGTCTGGTGTGGAGCAAGTACTTGCTCACAGGAAATGGCGGCGG
CGTGCGAACTTCGCGGTATCGTCAGCGCTGGTGCTGTCCGGCTCAATGGA
GGACATCTTGGTGCCGTCAGTGCCCACGCCACCGCCACCACTTGGCTGTG
GGCGTGGCGAGGACGACCCGGTGCCTGCTGTGTGCGATGCGATCCCGAGG
TCAGAGCTGAGGGAAGGGCCTGTGTTGTGCTGGTCATTATCGGTCTTTTG
TTGGGTAATGTAGACCGGTAGAAGCGAGCATGCTGCTTTCCTCGCCGATA
CCAATCCGTACAAAGACTCCATGGCTGAGGTACACACAGTATATTTTGTG
CAACCGACAATTTGATTGTTTTTTCTGCAATGTTCGTATTGCTCGGGTTT
AAAGAGGACAGTGCTTGGATGGTAAATAGAACCATGTAACAGTAGTTTCC
CCCGCGTTTAGTTGCTCTCTGCGGATTATGTAGACCCGCCGGAAGCTAGT
AGCGAGGTGGCACGGAGCGTCCGACCCTGCTTCAGAAATCGCCGAAGCTG
TCATGCATTCCCGAAAAGGTCCACGCAAAATTGTTTCGCTTCGGTGTGAT
TTGTGGTCGCGAATGCAAACGGGTTTCAAACCCGCCAATATTCGCTCTTG
TATATACTCTCATCAGCACCTTTGGAACGTTTTCTGGCATACACTACAGC
GATGACACCTCTTCAACAACCGCTGATATCCGTCCTTGTCATCATTTTGT
CTCAGCCATACGTTCTCCGCAAGCTCTGGATGCTGGGATCTTTCGCCTGG
CCTAAGAGGCTCCCCGGGCGAGGAACAGAACACCGTCGACGTATAGGATC
TAAAGGAAAGAACTACCGTTGTTGGCGTACTTTCTAAAGGAAAGAACTAC
CGTTGTTGGCGTACTTCAGTCTCGAGACGAAGAACGGATCAATCAACACA
TGAGTGATGGACAGGATGGAGCC back to topCoding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1496:16442..19414+ >mRNA_E-siliculosus-1a_F_contig1496.2882.1 ID=mRNA_E-siliculosus-1a_F_contig1496.2882.1|Name=mRNA_E-siliculosus-1a_F_contig1496.2882.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1968bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1496:16442..19414+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGCCACCCCGCACAGAACCAGTGTGGGACATCCTCAGAACGTTCGAATC
GAAATGCCGGACTGGGTCCGCCAACCGACGATGCCACCCCGCACAGAACC
AGTGTGGGACATCCTCAGAACGTTCGAATCGAAATGCCGGACTGGGTCCG
CCAACCGACGGAAAGCTTGCGAGCAAGCGGCGGCGGCCCTCGATATTGGC
TCGACACTGTTCGACGACTTCGACGGGGAGTTTGCAAGCACTCGACCTTC
GCCGCGGTACCCGCCGTTAGGGCCAAGGCCTCCGTTCTACCACCATCCAC
CGTCCGAAACCCTCCAAAATTGTTCACCAGAAGAAGTTTACGATCTACCT
TCACACCCACAACGCTGTTGTAACGGCGACACTGCTGGAGCAATTCCAAT
CATGGTGCCCCATCTGACGGAGACCGAATTACCTTCCGAAGCTTCTCCGA
GACATTTGGTGACAACCATTGCGTTGAAAACCCGGTCTGAACAAGAGCAA
CCGTCGTTAAACTCGAACAGCTACGTTTCGGAGCCGAGTCATGGAAGTTT
GAGGGGCGATACTTCCGGTCCTAGAAAATATGCAGCATGGCGAAGACCCG
AGCTATCGACCGTTGTCGTTCACAGTGCTGCGGCAACGGATGATAGTCGC
GATGTTGTCGATGACGGGAACATCGGTGGTCTCGGTGGCCCACTATCCAA
GCCGTCTGGTGTGGAGCAAGTACTTGCTCACAGGAAATGGCGGCGGCGTG
CGAACTTCGCGGTATCGTCAGCGCTGGTGCTGTCCGGCTCAATGGAGGAC
ATCTTGGTGCCGTCAGTGCCCACGCCACCGCCACCACTTGGCTGTGGGCG
TGGCGAGGACGACCCGGTGCCTGCTGTGTGCGATGCGATCCCGAGGAAAG
CTTGCGAGCAAGCGGCGGCGGCCCTCGATATTGGCTCGACACTGTTCGAC
GACTTCGACGGGGAGTTTGCAAGCACTCGACCTTCGCCGCGGTACCCGCC
GTTAGGGCCAAGGCCTCCGTTCTACCACCATCCACCGTCCGAAACCCTCC
AAAATTGTTCACCAGAAGAAGTTTACGATCTACCTTCACACCCACAACGC
TGTTGTAACGGCGACACTGCTGGAGCAATTCCAATCATGGTGCCCCATCT
GACGGAGACCGAATTACCTTCCGAAGCTTCTCCGAGACATTTGGTGACAA
CCATTGCGTTGAAAACCCGGTCTGAACAAGAGCAACCGTCGTTAAACTCG
AACAGCTACGTTTCGGAGCCGAGTCATGGAAGTTTGAGGGGCGATACTTC
CGGTCCTAGAAAATATGCAGCATGGCGAAGACCCGAGCTATCGACCGTTG
TCGTTCACAGTGCTGCGGCAACGGATGATAGTCGCGATGTTGTCGATGAC
GGGAACATCGGTGGTCTCGGTGGCCCACTATCCAAGCCGTCTGGTGTGGA
GCAAGTACTTGCTCACAGGAAATGGCGGCGGCGTGCGAACTTCGCGGTAT
CGTCAGCGCTGGTGCTGTCCGGCTCAATGGAGGACATCTTGGTGCCGTCA
GTGCCCACGCCACCGCCACCACTTGGCTGTGGGCGTGGCGAGGACGACCC
GGTGCCTGCTGTGTGCGATGCGATCCCGAGCCATACGTTCTCCGCAAGCT
CTGGATGCTGGGATCTTTCGCCTGGCCTAAGAGGCTCCCCGGGCGAGGAA
CAGAACACCGTCGACCCATACGTTCTCCGCAAGCTCTGGATGCTGGGATC
TTTCGCCTGGCCTAAGAGGCTCCCCGGGCGAGGAACAGAACACCGTCGAC
GAAAGAACTACCGTTGTTGGCGTACTTCAGTCTCGAGACGAAGAACGGAT
CAATCAACACATGAGTGATGGACAGGATGGAGCCGAAAGAACTACCGTTG
TTGGCGTACTTCAGTCTCGAGACGAAGAACGGATCAATCAACACATGAGT
GATGGACAGGATGGAGCC back to top
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