mRNA_E-siliculosus-1a_F_contig1495.2878.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1495.2878.1
Unique NamemRNA_E-siliculosus-1a_F_contig1495.2878.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1495.2878.1 vs. uniprot
Match: D7FVF4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVF4_ECTSI)

HSP 1 Score: 402 bits (1034), Expect = 1.190e-135
Identity = 205/208 (98.56%), Postives = 206/208 (99.04%), Query Frame = 3 
Query:   27 MKLALTFSAVLGVLSTRVECFVSSGGSALACGARSNTLATNGAFVQPIPSRCVATAERRRRSGDLGMSTVVVPSDFKLPIGIAAFGLAITGLGNVGAGFPVSVVGLLLAFQATRVKFEFDDVAMEVKIGETPDELESSGENAFVGGESRWNYDTWTNWEVYPSEKLPILMYFKETQTKPEGQIHFFPFIMEPDVLLQEVRARVPQVVK 650
            MKLALT SAVLGVLSTRVECFVSSGGS+LACGARSN LATNGAFVQPIPSRCVATAERRRRSGDLGMSTVVVPSDFKLPIGIAAFGLAITGLGNVGAGFPVSVVGLLLAFQATRVKFEFDDVAMEVKIGETPDELESSGENAFVGGESRWNYDTWTNWEVYPSEKLPILMYFKETQTKPEGQIHFFPFIMEPDVLLQEVRARVPQVVK
Sbjct:    1 MKLALTLSAVLGVLSTRVECFVSSGGSSLACGARSNKLATNGAFVQPIPSRCVATAERRRRSGDLGMSTVVVPSDFKLPIGIAAFGLAITGLGNVGAGFPVSVVGLLLAFQATRVKFEFDDVAMEVKIGETPDELESSGENAFVGGESRWNYDTWTNWEVYPSEKLPILMYFKETQTKPEGQIHFFPFIMEPDVLLQEVRARVPQVVK 208
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BLAST of mRNA_E-siliculosus-1a_F_contig1495.2878.1 vs. uniprot
Match: A0A836CR12_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CR12_9STRA)

HSP 1 Score: 179 bits (454), Expect = 2.360e-49
Identity = 95/168 (56.55%), Postives = 111/168 (66.07%), Query Frame = 3 
Query:  135 TLATNGAFVQPIPSRCVATAERRRRSGDLGMSTVVVPSDFKLPIGIAAFGLAITGLGNVGAGFPVSVVGLLLAFQATRVKFEFDDVAMEVKIGETPDELESSGENAFVGGESRWNYDTWTNWEVYPSEKLPILMYFKETQTKPEGQIHFFPFIMEPDVLLQEVRARVP 638
            +LA    +V     R VA       + D    TV +P DF+LP  + A G A+   GN  AG PV  +G LL  QATRV+FEFD  +MEVKI     +L  SGEN  VGG++RW YDTWTNWEVYPSE LP+LMYFKETQT P+GQIHFFPFIM P  LL+EVRARVP
Sbjct:   30 SLAVRTPYVSSSSGRAVAAKPMCMMAKDA--DTVAIPPDFRLPAALVAIGGALAVSGN-RAGLPVLGIGALLGLQATRVRFEFDAESMEVKIDAGKGDLADSGENFAVGGQNRWAYDTWTNWEVYPSEALPVLMYFKETQTSPDGQIHFFPFIMNPGQLLKEVRARVP 194
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BLAST of mRNA_E-siliculosus-1a_F_contig1495.2878.1 vs. uniprot
Match: A0A0G4FRW9_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FRW9_VITBC)

HSP 1 Score: 144 bits (362), Expect = 6.850e-36
Identity = 75/142 (52.82%), Postives = 95/142 (66.90%), Query Frame = 3 
Query:  231 TVVVPSDFKLPIGIAAFGLAIT-GLGNVGAGFPVSVVGLLLAFQATRVKFEFDDVAMEVKIGETPDELES---SGENAFVGGESRWNYDTWTNWEVYPSEKLPILMYFKETQTKPEGQIHFFPFIMEPDVLLQEVRARVPQV 644
            TVVVP DF+L  G  A G A+     N  AG P+ ++G  LA Q TRV+FEFD  ++EVKI +   + E+   SG+N  VGG +RW YDT+TNWE+YPS  LPIL+YFKETQT PEGQIHFFP IM    L + +  R P++
Sbjct:   79 TVVVPPDFRLAAGFVAGGAALCLAANNYAAGVPIGLIGAFLALQTTRVRFEFDADSLEVKILKKDGDAETLADSGDNFAVGGANRWKYDTFTNWEMYPSPSLPILVYFKETQTIPEGQIHFFPVIMNGRKLYEIMEERCPRL 220
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BLAST of mRNA_E-siliculosus-1a_F_contig1495.2878.1 vs. uniprot
Match: K8Z8S9_NANGC (Uncharacterized protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8Z8S9_NANGC)

HSP 1 Score: 136 bits (342), Expect = 2.760e-33
Identity = 71/165 (43.03%), Postives = 103/165 (62.42%), Query Frame = 3 
Query:  168 IPSRCVATA-----ERRRRSGDLGMSTVVVPSDFKLPIG--IAAFGLAITGLGNVGAGFPVSVVGLLLAFQATRVKFEFDDVAMEVK-IGETPDELESSGENAFVGGESRWNYDTWTNWEVYPSEKLPILMYFKETQTKPEGQIHFFPFIMEPDVLLQEVRARVP 638
            +P+R   TA      +++++  + +   V+  D+++  G  +   GLA+  L N GAG P++++G  LA +  +V+F FD+ AMEV  +G     L    EN  VGG +RW Y ++TNWE YPSE++P+L+YFKETQTKPEGQIHFFP I  P  LL+  R  VP
Sbjct:   39 VPARLPVTALNSWGGKKQKTTRVAVEPEVIAPDYRVAAGFFLGGVGLALPPLSNPGAGLPLALIGAFLASRTQKVRFVFDEEAMEVMTVGADGQSLSMERENFAVGGRNRWTYASFTNWEFYPSEQVPVLVYFKETQTKPEGQIHFFPVIGNPARLLENFRKYVP 203
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BLAST of mRNA_E-siliculosus-1a_F_contig1495.2878.1 vs. uniprot
Match: A0A7S2XVT8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVT8_9STRA)

HSP 1 Score: 134 bits (336), Expect = 2.760e-33
Identity = 65/125 (52.00%), Postives = 88/125 (70.40%), Query Frame = 3 
Query:  228 STVVVPSDFKLPIGIAAFGLAITGLG-NVGAGFPVSVVGLLLAFQATRVKFEFDDVAMEVKIGETPDELESSGENAFVGGESRWNYDTWTNWEVYPSEKLPILMYFKETQTKPEGQIHFFPFIME 599
            ST++ P DF++P+ +   G+ +   G N+ AG P++++G  L FQ TR++F FD  A+E+K   T D L +SGEN  VGG +RW+YDT+TNW  YPS   PIL+YFKETQT PEGQIHFFP I +
Sbjct:    3 STIISP-DFRIPLALIGIGVGLAVPGENIFAGIPITLIGAALTFQTTRLRFVFDSKALELKYA-TKDGLVNSGENFKVGGANRWDYDTFTNWVFYPSPSFPILVYFKETQTSPEGQIHFFPVIAD 125
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BLAST of mRNA_E-siliculosus-1a_F_contig1495.2878.1 vs. uniprot
Match: UPI000D1C73A7 (uncharacterized protein LOC112351026 n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1C73A7)

HSP 1 Score: 135 bits (341), Expect = 2.950e-33
Identity = 67/135 (49.63%), Postives = 94/135 (69.63%), Query Frame = 3 
Query:  198 RRRRSGDLGMSTVVVPSDFKLPIGIAAFGLAITGLGNVGAGFPVSVVGLLLAFQATRVKFEFDDVAMEVKIGETPDELESSGENAFVGGESRWNYDTWTNWEVY-PSEKLPILMYFKETQTKPEGQIHFFPFIME 599
            +R+++  +   TV+   D+++P+ +     A+    N+    P+ ++GLLL FQ TRVKF FDD A+EVKIG    EL+ SGEN FVGG++RW Y T+TNWE++ PS   P+L+YFKETQTKPEGQ+HFFP I +
Sbjct:   48 KRKQAAKIVRETVIPAPDYRIPVVLLGAAGALVYTDNLLPAAPIGLLGLLLLFQTTRVKFVFDDEALEVKIGS---ELQESGENVFVGGKNRWKYSTFTNWELWWPS--FPVLVYFKETQTKPEGQVHFFPVIFD 177
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BLAST of mRNA_E-siliculosus-1a_F_contig1495.2878.1 vs. uniprot
Match: A0A804P2C3_MAIZE (Uncharacterized protein n=4 Tax=Zea mays TaxID=4577 RepID=A0A804P2C3_MAIZE)

HSP 1 Score: 135 bits (340), Expect = 3.150e-33
Identity = 72/147 (48.98%), Postives = 97/147 (65.99%), Query Frame = 3 
Query:  183 VATAERRRRSGDLGM--------STVVVPSDFKLPIGIAAFGLAITGLGNVGAGFPVSVVGLLLAFQATRVKFEFDDVAMEVKIGETPDELESSGENAFVGGESRWNYDTWTNWEVYPSEKLPILMYFKETQTKPEGQIHFFPFIME 599
            V   E++RR+  + M        +TVV   D++LPI I     A     N+ A  PV ++GLLL FQ TRV+F FD+ A+EVK+GE   +L+ SGEN FVGG++RW Y T+ NWE++  +  P+L+YFKETQTKPEGQIHFFP I +
Sbjct:   26 VRCREQQRRTTIVSMLGRKSTARATVVPDPDYRLPIAILGIASAFAYADNLLAAAPVGLLGLLLLFQTTRVRFVFDNEALEVKVGE---QLQESGENVFVGGKNRWKYSTFVNWELWWPQ-FPVLVYFKETQTKPEGQIHFFPVIFD 168
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BLAST of mRNA_E-siliculosus-1a_F_contig1495.2878.1 vs. uniprot
Match: A0A6J1CN08_MOMCH (uncharacterized protein LOC111012982 n=1 Tax=Momordica charantia TaxID=3673 RepID=A0A6J1CN08_MOMCH)

HSP 1 Score: 135 bits (341), Expect = 4.130e-33
Identity = 72/126 (57.14%), Postives = 92/126 (73.02%), Query Frame = 3 
Query:  222 GMSTVVVPSDFKLPIGI--AAFGLAITGLGNVGAGFPVSVVGLLLAFQATRVKFEFDDVAMEVKIGETPDELESSGENAFVGGESRWNYDTWTNWEVYPSEKLPILMYFKETQTKPEGQIHFFPFI 593
            G  TV+   D+++P+ +  AA GLA T   N+ +  PV ++GLLL  QATRV+F FDD A+EVKIG   D+LE SGENAFVGG++RW Y T+ NWE++     PIL+YFKETQTKPEGQ+HFFP I
Sbjct:   66 GRETVIPDPDYRIPVVLLGAAGGLAYTD--NLLSAVPVGLLGLLLLVQATRVRFVFDDEALEVKIG---DQLEDSGENAFVGGKNRWKYSTFVNWELW-WPNFPILVYFKETQTKPEGQVHFFPVI 185
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BLAST of mRNA_E-siliculosus-1a_F_contig1495.2878.1 vs. uniprot
Match: A0A1D6QNZ7_MAIZE (DUF3119 family protein n=3 Tax=Zea mays TaxID=4577 RepID=A0A1D6QNZ7_MAIZE)

HSP 1 Score: 135 bits (340), Expect = 5.860e-33
Identity = 72/147 (48.98%), Postives = 97/147 (65.99%), Query Frame = 3 
Query:  183 VATAERRRRSGDLGM--------STVVVPSDFKLPIGIAAFGLAITGLGNVGAGFPVSVVGLLLAFQATRVKFEFDDVAMEVKIGETPDELESSGENAFVGGESRWNYDTWTNWEVYPSEKLPILMYFKETQTKPEGQIHFFPFIME 599
            V   E++RR+  + M        +TVV   D++LPI I     A     N+ A  PV ++GLLL FQ TRV+F FD+ A+EVK+GE   +L+ SGEN FVGG++RW Y T+ NWE++  +  P+L+YFKETQTKPEGQIHFFP I +
Sbjct:   48 VRCREQQRRTTIVSMLGRKSTARATVVPDPDYRLPIAILGIASAFAYADNLLAAAPVGLLGLLLLFQTTRVRFVFDNEALEVKVGE---QLQESGENVFVGGKNRWKYSTFVNWELWWPQ-FPVLVYFKETQTKPEGQIHFFPVIFD 190
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BLAST of mRNA_E-siliculosus-1a_F_contig1495.2878.1 vs. uniprot
Match: J3M6Z6_ORYBR (Uncharacterized protein n=12 Tax=Oryzinae TaxID=1648021 RepID=J3M6Z6_ORYBR)

HSP 1 Score: 135 bits (339), Expect = 6.280e-33
Identity = 69/121 (57.02%), Postives = 86/121 (71.07%), Query Frame = 3 
Query:  231 TVVVPSDFKLPIGIAAFGLAITGLGNVGAGFPVSVVGLLLAFQATRVKFEFDDVAMEVKIGETPDELESSGENAFVGGESRWNYDTWTNWEVYPSEKLPILMYFKETQTKPEGQIHFFPFI 593
            T+V   D++LPI I     A     N+ A  PV ++G LL FQ TRV+F FDD A+EVK+G   D+LESSGEN FVGG++RW Y T+ NWE++  +  PIL+YFKETQTKPEGQIHFFP I
Sbjct:   63 TIVPDPDYRLPIVILGIAGAFAYADNLLAAAPVGLLGCLLLFQTTRVRFVFDDQALEVKVG---DQLESSGENVFVGGKNRWKYSTFVNWELWWPQ-FPILVYFKETQTKPEGQIHFFPVI 179
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1495.2878.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVF4_ECTSI1.190e-13598.56Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CR12_9STRA2.360e-4956.55Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A0G4FRW9_VITBC6.850e-3652.82Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
K8Z8S9_NANGC2.760e-3343.03Uncharacterized protein n=2 Tax=Nannochloropsis ga... [more]
A0A7S2XVT8_9STRA2.760e-3352.00Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
UPI000D1C73A72.950e-3349.63uncharacterized protein LOC112351026 n=2 Tax=Selag... [more]
A0A804P2C3_MAIZE3.150e-3348.98Uncharacterized protein n=4 Tax=Zea mays TaxID=457... [more]
A0A6J1CN08_MOMCH4.130e-3357.14uncharacterized protein LOC111012982 n=1 Tax=Momor... [more]
A0A1D6QNZ7_MAIZE5.860e-3348.98DUF3119 family protein n=3 Tax=Zea mays TaxID=4577... [more]
J3M6Z6_ORYBR6.280e-3357.02Uncharacterized protein n=12 Tax=Oryzinae TaxID=16... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1495contigE-siliculosus-1a_F_contig1495:24999..30304 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size627
Model size1787
Exons4
Ec32 orthologEc-14_000910.1
Ec32 ortholog descriptionProtein of unknown function DUF3119
Hectar predicted targeting categorysignal peptide
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.S
EggNOG OGs2CPJ9@1,2R1VP@2759
EggNOG free text desc.Protein of unknown function (DUF3119)
Seed eggNOG ortholog2880.D7FVF4
Seed ortholog evalue3.1e-110
Seed ortholog score404.4
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1495.2878.1prot_E-siliculosus-1a_F_contig1495.2878.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1495 25025..29170 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928006.459866-UTR-E-siliculosus-1a_F_contig1495:24998..250241622928006.459866-UTR-E-siliculosus-1a_F_contig1495:24998..25024Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1495 24999..25024 +
1696318769.453595-UTR-E-siliculosus-1a_F_contig1495:24998..250241696318769.453595-UTR-E-siliculosus-1a_F_contig1495:24998..25024Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1495 24999..25024 +
1622928006.5266433-UTR-E-siliculosus-1a_F_contig1495:29170..303041622928006.5266433-UTR-E-siliculosus-1a_F_contig1495:29170..30304Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1495 29171..30304 +
1696318769.5098522-UTR-E-siliculosus-1a_F_contig1495:29170..303041696318769.5098522-UTR-E-siliculosus-1a_F_contig1495:29170..30304Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1495 29171..30304 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928006.4740164-CDS-E-siliculosus-1a_F_contig1495:25024..251731622928006.4740164-CDS-E-siliculosus-1a_F_contig1495:25024..25173Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1495 25025..25173 +
1696318769.462828-CDS-E-siliculosus-1a_F_contig1495:25024..251731696318769.462828-CDS-E-siliculosus-1a_F_contig1495:25024..25173Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1495 25025..25173 +
1622928006.4846566-CDS-E-siliculosus-1a_F_contig1495:27471..276881622928006.4846566-CDS-E-siliculosus-1a_F_contig1495:27471..27688Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1495 27472..27688 +
1696318769.472854-CDS-E-siliculosus-1a_F_contig1495:27471..276881696318769.472854-CDS-E-siliculosus-1a_F_contig1495:27471..27688Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1495 27472..27688 +
1622928006.5001256-CDS-E-siliculosus-1a_F_contig1495:28522..287051622928006.5001256-CDS-E-siliculosus-1a_F_contig1495:28522..28705Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1495 28523..28705 +
1696318769.4904222-CDS-E-siliculosus-1a_F_contig1495:28522..287051696318769.4904222-CDS-E-siliculosus-1a_F_contig1495:28522..28705Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1495 28523..28705 +
1622928006.5138345-CDS-E-siliculosus-1a_F_contig1495:29092..291701622928006.5138345-CDS-E-siliculosus-1a_F_contig1495:29092..29170Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1495 29093..29170 +
1696318769.4999514-CDS-E-siliculosus-1a_F_contig1495:29092..291701696318769.4999514-CDS-E-siliculosus-1a_F_contig1495:29092..29170Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1495 29093..29170 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1495.2878.1

>prot_E-siliculosus-1a_F_contig1495.2878.1 ID=prot_E-siliculosus-1a_F_contig1495.2878.1|Name=mRNA_E-siliculosus-1a_F_contig1495.2878.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=209bp
MKLALTFSAVLGVLSTRVECFVSSGGSALACGARSNTLATNGAFVQPIPS
RCVATAERRRRSGDLGMSTVVVPSDFKLPIGIAAFGLAITGLGNVGAGFP
VSVVGLLLAFQATRVKFEFDDVAMEVKIGETPDELESSGENAFVGGESRW
NYDTWTNWEVYPSEKLPILMYFKETQTKPEGQIHFFPFIMEPDVLLQEVR
ARVPQVVK*
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mRNA from alignment at E-siliculosus-1a_F_contig1495:24999..30304+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1495.2878.1 ID=mRNA_E-siliculosus-1a_F_contig1495.2878.1|Name=mRNA_E-siliculosus-1a_F_contig1495.2878.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=5306bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1495:24999..30304+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CCTTCCTCGCAGCAACACACGCGATCATGAAGCTGGCTCTCACTTTCTCC
GCTGTGCTAGGCGTCCTCTCCACGCGTGTAGAATGCTTCGTGTCTAGCGG
AGGCTCTGCCCTCGCGTGCGGTGCCCGCTCGAACACGCTAGCAACGAACG
GCGCCTTCGTGCAGCCCATACCGAGGTAGGAACCACGTCGGGTTTCGCGT
GCTGTTTGTGCAGGCTTTACTACCGGTTTTACTTGTTGTGCACGATGGGA
TCGTGGCTAGGGCATCAACGGTGGGCCTGCGAGTGGGGTGTGCTGTAGTT
TGAATCTCGTCAATTCTGCTGCTGCTTACGTGCCTGAAATCGTGGTCGTT
GTGTGCATTGTCTTCTTCTGCTGCGCTGCTGCATCTTTCCCGCTCTAAAA
GATTATGAATGCGACATGCAACTCTACGTCTCTACGTTCTCATGAACCTT
TTTTCTCACCTGGCACCACATACATATCACGCACCCTCGAATAGTGACTT
TAACTTTCACCGTCAGTCTCGGTGATTTGTACCAAAGTGCAATGACCCGG
GAGAGATGTTGGGTGGTTTTGGTTTTGAAGGGGGGGTGGTCTGGCGATAT
GCAATCACGTGTGGCAAGTGGCATCATCGGCATCATCATGCCCGCGCGGT
TCCTCAAATCCGCAAGCTATCCACAACGGTACATAGAAGCAGCAGCAGCA
CTCCGCAGAAAAAACAACTGCGGAATAGTTGTGGACGATATAGAGTTTGG
ATGATATGAGGCCTCCGCTACGGCATGGGACCCACCCTGTCACCGAACGT
ATTTCGTTTTTTGGGTACGAAGGGCAATGACGGCCGTTGTATCTTCGTTG
GAGAAGTATGGGGATAAAATTCAGGCAACGACAGGGGATAAAAGGTCAAT
TACATGAAGTAGGGCGGGTCCCATGCCGTAGCGGAGGCCTCATTTCATCC
CAAACTCGAACGTACATCGTCGGCAACTTTGCATATTCCGCAGTAAAATA
TGTCGAAATCATGGAACCAGGAAGAGGCTCCGTGGATGAGAACAGATTGC
CTGCAAAGAGGCTTGGAGAGAACGCCCACTCGTCACAAGCCTCCCCAACC
CTAACGAGGAAGCACCTTGGTCGAACAATAGTAGACTACCATGCTGCTGA
GCGCGACTCAGCTGGCCGCGGCCAAGGCCGTCCCCCCCAGGGAAAGCAGT
AAAAGAGTTGGTATGCTGCGATACGAGCTCGGCCATTGGGGCCCTCCCGA
CTCTTGCCCTGGCGCGGGTGTGCACCAGCGAGGGCGCATCGTTGGAAGGC
AAGGACAAGATCGGGCCGTTCACCATGACTCTACCCCTGGTACTTGCGCC
CGGTGTTCTCCGCTACTATGTTCGCCAGGAAGGCGTCAAGGTCTGGATGC
CCTTGGTGGGCTTGCTGAAGGTGTCTTTTTACGTACTCGCGTTTCTTGGA
CGGCCTCCACGTGATGGTACATATCAGCGACTCCGACCGGTGCCAGGATC
TCGATGACGACGCCGGCCATCATGGTCGCTGTCGACGCTAGAGCTGTGGC
CCCCAGACCCCTTGCCTGGCCCACGCCCACCGCTCTTGACCCCAGCCTCC
CCCGGCGACCATGATGGCCGGCGTCGTCATCGAGATCCTGGCACCGGTCG
GAGTTACCAGTATCATCACGTGGAGGCCGTCCAAGCAACGCGAGTACGTA
AAAAGACACCTTCAACAAGCCCACCAAGGGCATCCAGACCTTGACGCCTT
CCTGGCGAACATAGTAGCGGAGAACACCGGGCGCTAGGTAGAGTCATGGT
GAACGGCCCGGTCTTGTCCTTGCCTTCCAACGATGCGCCCTCGCTGGTGC
ACACCCGCGCCAGGGCAAGAGTCGGGAGGGCCCCAATGGCCGAGCTCGTA
TCGTATCGCAGCATACCAACTCTTTTACTGCTTTCCCTGGGGGGAACGGC
CTTGGCCGCGGCCAGCTGAGTCGCGCTCAGCAGCATGGTAGTCTACTGTT
GTTCGACCAAGGTGCTTCCTCGTTAGGGTTGGGGAGGCTTGCCACGAGTG
GGCGCTCTCTCCAAGCCTCTTTGCAGGCAATCTGTTCTCGTGGTTCCATG
ATTTCGACATTATTTTACGGTAGCTATTTTTACCAGCAGCAAGCGCCCGT
TGTTTGTTGAGCCTGCGCTTTGCAGCATCTCGTGTTGCAATCACATTAGA
ACTACAGGCGAGCTGTCTTCCACCGTTTCACTGACCTATGCATATGATGT
CAAGTCCCACTGAAGGTTGACTTTTATCAACACACTTATCACCTCCGCCC
AAACGCCGACGTATTACATTCGAAGTCTATCGTAGACACACCGGGGGACA
GCAGTTTGATTTTTGTGCCTCGGAACGTTATCGCGGGGTGGACAGCCGGG
TATGGTGTTTCTATTGTTCGCAAGTGCTGTTCTACCTTCACGCACTTTTT
CGTCCCTTACAACCTCTCTGCAGCCGATGCGTGGCAACCGCGGAGCGGAG
GAGGAGGAGCGGCGACCTGGGCATGTCCACGGTAGTCGTCCCCTCGGACT
TCAAGCTCCCGATAGGCATCGCCGCGTTCGGGCTGGCCATCACGGGGCTC
GGCAACGTCGGGGCGGGATTCCCCGTCAGCGTCGTGGGGCTATTGCTTGC
CTTCCAGGCGACGAGGGTCAAGTTCGAGTTTGATGATGTGGTGCGTGCAG
CAGCAGATGATGGGGAGAAGGCGGGAGATACTTCGGGCGTAGTGTATTCT
GCTGTTAATTGTGTTGCGCCGTCGGTTTATACTCCCGACGCAATTGAAGG
GACAATTGCTTGTGTGTTATGTGTCCGCAGGATGGTCGGCAGCGGGCCGT
CTGTGGTGCTTACTGTTGAGATATGTTGAGAGTGTGACAACATTTAGAAA
GGGCTAATGGTGCTGCAGCAGCGATAGTGTTGGGGCACGTCGCGGCCTTG
GAAGCCCTACAAATGATAACAAGCCGTGCTCTTTCTGCGTACGGCAGTAC
CATCACCCCTTTCTCGCTAGAGGCCAGAATCAGGCTAAGACAGACTCCGT
TGTAGGCGTTTTCACTTGGCCCTAGCGACTTTGACCCTTCTCGATTTTAT
CGTGTTTGGTACAACACCCATTTACCCATATCTAGAGCTGTCGTTTGTGG
CCTTCTCTTCTCTGCGGGGAACCTGCACACCATTCGGGGGCCACGCAAAC
GAGTTCCCTCCGTTGAGCAGGCCTTGGTTTCATGGCGAGAAGGGATGACC
AAGACGTATTTTCTCTCTTCCACAATTGTTTCGAATTTATACACGAAGGA
CTTTCAGAGCATGGGGATTTTGAAGCCACCAGCCTTGACCATCCAAAAGC
GATCGGTCGAGGAAACCTATTCCAGGCAGACCGTGAGGTTTGTGAGATGC
AATCTGCGTTGGTCGGTGCATTCGTGCGGCGTTTGTGTCGTGGTATGTAT
GTGAATGTGTGTGCGTCTCTCTCGTGTAATCGGTCTCTTGCCTTCCTTTG
TCCTGGGCGTGTTCGGCACGTCAGGCGATGGAGGTGAAAATAGGCGAGAC
GCCGGACGAGCTGGAGAGCTCGGGCGAGAACGCCTTTGTCGGGGGAGAGT
CGCGTTGGAACTACGACACGTGGACGAACTGGGAGGTCTACCCCAGCGAG
AAGCTGCCCATCCTCATGTACTTCAAGGAGACGCAGACCAAGCCGGAGGG
ACAAATTGTGAGGGATTTGTCGTATTTATGATTTTGTTCGTGTGTTTTAG
ACGATGTTGTCCGTACAGTAGATAGAGGTTGGGAGGAGTGTTTCTGTTTT
TTTGTGTGGAATGCTAGGTGGTGATGACTTCGTCTTGTGAATTAGGAATC
GTTAGAAGAATTCCGGTGGCTGATCAGTGTGATGCCGATATGGCACGTGT
GTTGTGTGCCGTGCTGATTGAACTATGCTACCGCTCTTTTCGTTCCATGG
CGTCCTTCTACACTGATACTTTGTGGCGAAATTCCACGACGTTCTCAACG
CCCCCCCCCCCCCTCTACACGTCCCGTCCGCTCACGTCTCCCCTCTCCCT
CCTCCGCCCTTGATTGCCTTCCTTAATTCGTACTGTTGAATTAGCATTTC
TTCCCTTTCATCATGGAACCCGACGTACTTTTGCAAGAAGTCCGGGCACG
CGTGCCGCAAGTCGTCAAGTAAGCCGACAAAATCTACCAATCGCCGAAGG
CCCTAGCTCCGTCGGCACTCGATCGAGACAAGAGTAGGTCGGAAGGCTTT
CGGTGCCAATTGGCCTGTCGCTCATGGAAGCTGACGGCAGCAAAACCTGC
CACTAAAGTCGACGTGAGACTGTTTTCTTTTGCCACGAGCTTGTAGATGG
AGAATTTTTTAGAAGTCGAAGGTAGGCACGTTTTGTCTCTTTTCTCTGCA
GTTGGTCTGAGATCCCGGTGGGGCGGCATACGTTCTGAATTGTTTAGTCA
GCCAATTTGACTAACGTTTTTTTTGTAGTCACGTTTCAAGACGCCGTGAA
CTGTTGCAACCACGGTTGTCAACAAAGAACAGGCAGGCAGCAAAGGTAGG
GTGACCCTGAATGACTGCTGCCTGGCATGTAACTGGGTGATAGATTTATG
TTATAATAGTTCCAGCGTGTCCATGGTGACAGGAAAAGCACGACGTGACC
GAAGCATATGTATTGAGAGAACCGGGGGCTTGTGAGGTTTGCTGAACTTG
TGTAACTGTAAACTTCACCGTTCATTCGAGGAAACATGAAGTCGGTGTGA
AGGTGGAAATAGACTTCGTGGCACGTTTGGTGCACCGACGTTCTTGCGAC
GGGTTGTTGAGAGTTGTGAGTGCATGGTAGAGGGCATACGAACTTAACCG
CCCGCACAGTTTGTTGTTTCTTGTGAAAAGGATGAGCTCGGTCAGAAGAC
GACTATTTAGTGGCTGAGCAGTCCACTGCTACCCTCGTTCGTAGCATTGT
CTGTCTCGGCAGAGGTTGTGGATCGAATCTCTCCGGAGGGAAAAAAGAAC
ACGAGTTAGAGGTGAGGAGCGCACAAGAGAGAGGGAAGTGGAAGCAAGAG
ACTCGCTCTCGCGTTAAGTGTTGAAGGCAACCACGGCAGGAGGAAAGACG
GAGAATTCCTCCTGTGTAACCCCGGCCGGTGCGCACTATATACGCGAAAG
GCGTAGATTAGCGCCTAGCATGCCTGGGACACTAAAAAACAGTACAAGAG
GGCAACGAACATATAGTCGGATGTGACCGCAACTTGCTTTTTCCGTAGAG
AAATGGCGCATTTCTTCCGTTGAGGAAGAACAAATTGGGTCCCTGACGTG
CAACAT
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1495:24999..30304+

>mRNA_E-siliculosus-1a_F_contig1495.2878.1 ID=mRNA_E-siliculosus-1a_F_contig1495.2878.1|Name=mRNA_E-siliculosus-1a_F_contig1495.2878.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1254bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1495:24999..30304+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGAAGCTGGCTCTCACTTTCTCCGCTGTGCTAGGCGTCCTCTCCACGCG
TGTAGAATGCTTCGTGTCTAGCGGAGGCTCTGCCCTCGCGTGCGGTGCCC
GCTCGAACACGCTAGCAACGAACGGCGCCTTCGTGCAGCCCATACCGAGA
TGAAGCTGGCTCTCACTTTCTCCGCTGTGCTAGGCGTCCTCTCCACGCGT
GTAGAATGCTTCGTGTCTAGCGGAGGCTCTGCCCTCGCGTGCGGTGCCCG
CTCGAACACGCTAGCAACGAACGGCGCCTTCGTGCAGCCCATACCGAGCC
GATGCGTGGCAACCGCGGAGCGGAGGAGGAGGAGCGGCGACCTGGGCATG
TCCACGGTAGTCGTCCCCTCGGACTTCAAGCTCCCGATAGGCATCGCCGC
GTTCGGGCTGGCCATCACGGGGCTCGGCAACGTCGGGGCGGGATTCCCCG
TCAGCGTCGTGGGGCTATTGCTTGCCTTCCAGGCGACGAGGGTCAAGTTC
GAGTTTGATGATGTGCCGATGCGTGGCAACCGCGGAGCGGAGGAGGAGGA
GCGGCGACCTGGGCATGTCCACGGTAGTCGTCCCCTCGGACTTCAAGCTC
CCGATAGGCATCGCCGCGTTCGGGCTGGCCATCACGGGGCTCGGCAACGT
CGGGGCGGGATTCCCCGTCAGCGTCGTGGGGCTATTGCTTGCCTTCCAGG
CGACGAGGGTCAAGTTCGAGTTTGATGATGTGGCGATGGAGGTGAAAATA
GGCGAGACGCCGGACGAGCTGGAGAGCTCGGGCGAGAACGCCTTTGTCGG
GGGAGAGTCGCGTTGGAACTACGACACGTGGACGAACTGGGAGGTCTACC
CCAGCGAGAAGCTGCCCATCCTCATGTACTTCAAGGAGACGCAGACCAAG
CCGGAGGGACAAATTGCGATGGAGGTGAAAATAGGCGAGACGCCGGACGA
GCTGGAGAGCTCGGGCGAGAACGCCTTTGTCGGGGGAGAGTCGCGTTGGA
ACTACGACACGTGGACGAACTGGGAGGTCTACCCCAGCGAGAAGCTGCCC
ATCCTCATGTACTTCAAGGAGACGCAGACCAAGCCGGAGGGACAAATTCA
TTTCTTCCCTTTCATCATGGAACCCGACGTACTTTTGCAAGAAGTCCGGG
CACGCGTGCCGCAAGTCGTCAAGTAACATTTCTTCCCTTTCATCATGGAA
CCCGACGTACTTTTGCAAGAAGTCCGGGCACGCGTGCCGCAAGTCGTCAA
GTAA
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