mRNA_E-siliculosus-1a_F_contig14937.2872.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig14937.2872.1
Unique NamemRNA_E-siliculosus-1a_F_contig14937.2872.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig14937.2872.1 vs. uniprot
Match: A0A0P8BDE0_9GAMM (L-asparaginase n=5 Tax=Halomonas TaxID=2745 RepID=A0A0P8BDE0_9GAMM)

HSP 1 Score: 446 bits (1148), Expect = 6.050e-156
Identity = 228/267 (85.39%), Postives = 241/267 (90.26%), Query Frame = 1
Query:    1 LAAQLGSHWQRYDAFVVLHGTDTMAYSASALSFMLGALDKPVIFTGSQIPLGEPRSDALNNVVSALQLAAHQESPCEVSLAFHDRLLRGNRARKVRTQGFDAFGSPNFPWLAELGIGMRFHPTTALLRGIPNFAPIAVDDEAVAILPLHPGMSLRRAKALLADETLKGLVLYSYGVGNPPSFKGELLSALTAANERGIALLNVTQCVQGEVVQGAYATGAALNKSGVIAGSDITLEAAVAKLTVLIGRGLEGGALRQALKSAVRGEC 801
            L A L SHW  YDAFVVLHGTDTMAYSA+ALSFMLGAL+KPVIFTGSQIPLGEPRSDALNNVVSALQLA H  +PCEVSLAFHDRLLRGNRARKVRTQG DAF SPNFPWLAELGI +RF   +ALL GIPNFAPI VDDEAVA+LPL+PGMSLRRAKALLADE+LKGLVLYSYGVGNPPSF GELL AL AANERG+ALLNVTQC QGEVVQGAYATGAALN++GVIAG DITLEAA+AKL VL+GRGL G ALR  LKSAVRGEC
Sbjct:   69 LVALLESHWAHYDAFVVLHGTDTMAYSAAALSFMLGALNKPVIFTGSQIPLGEPRSDALNNVVSALQLAVHPATPCEVSLAFHDRLLRGNRARKVRTQGLDAFDSPNFPWLAELGISLRFPQPSALLSGIPNFAPITVDDEAVAVLPLYPGMSLRRAKALLADESLKGLVLYSYGVGNPPSFAGELLDALKAANERGVALLNVTQCAQGEVVQGAYATGAALNQAGVIAGGDITLEAALAKLNVLLGRGLSGLALRHCLKSAVRGEC 335          
BLAST of mRNA_E-siliculosus-1a_F_contig14937.2872.1 vs. uniprot
Match: A0A7Y6RAL6_9GAMM (Asparaginase n=1 Tax=Halomonas maris TaxID=2729617 RepID=A0A7Y6RAL6_9GAMM)

HSP 1 Score: 440 bits (1131), Expect = 2.100e-153
Identity = 227/268 (84.70%), Postives = 245/268 (91.42%), Query Frame = 1
Query:    1 LAAQLGSHWQRYDAFVVLHGTDTMAYSASALSFMLGALDKPVIFTGSQIPLGEPRSDALNNVVSALQLAAHQESPCEVSLAFHDRLLRGNRARKVRTQGFDAFGSPNFPWLAELGIGMRFHPTTALLRGIPNFAPIAVDDEAVAILPLHPGMSLRRAKALLADETLKGLVLYSYGVGNPPSFKGELLSALTAANERGIALLNVTQCVQGEVVQGAYATGAALNKSGVIAGSDITLEAAVAKLTVLIGRGLEGGALRQALKSAVRGECS 804
            LAAQL +HW RYDAFVVLHGTDTMAYSASALSFMLGALDKPVIFTGSQIPLGEPRSDALN+VVSALQLAAH ++P EVSLAFHDRLLRGNRARKVRTQG DAF SPNFPWLAELGIG+RF   +ALL G PNFAPI VDDEAVA+LPLHPGMSLRRAK LLAD+TLKGLVLY+YGVGNP SF+GELL  L AANERG+ALLNVTQC QGEVVQGAYATGAALN++GVIAGSDITLEAA+AKLTVLIG+GL G ALR+AL + +RGE S
Sbjct:   69 LAAQLENHWPRYDAFVVLHGTDTMAYSASALSFMLGALDKPVIFTGSQIPLGEPRSDALNSVVSALQLAAHPDTPREVSLAFHDRLLRGNRARKVRTQGLDAFDSPNFPWLAELGIGIRFPQPSALLIGKPNFAPIEVDDEAVAVLPLHPGMSLRRAKVLLADKTLKGLVLYTYGVGNPLSFEGELLDCLKAANERGVALLNVTQCAQGEVVQGAYATGAALNQAGVIAGSDITLEAAIAKLTVLIGQGLVGPALRKALSAPMRGERS 336          
BLAST of mRNA_E-siliculosus-1a_F_contig14937.2872.1 vs. uniprot
Match: A0A2A4HK55_9GAMM (L-asparaginase 1 n=2 Tax=Halomonas TaxID=2745 RepID=A0A2A4HK55_9GAMM)

HSP 1 Score: 439 bits (1128), Expect = 6.230e-153
Identity = 224/268 (83.58%), Postives = 245/268 (91.42%), Query Frame = 1
Query:    1 LAAQLGSHWQRYDAFVVLHGTDTMAYSASALSFMLGALDKPVIFTGSQIPLGEPRSDALNNVVSALQLAAHQESPCEVSLAFHDRLLRGNRARKVRTQGFDAFGSPNFPWLAELGIGMRFHPTTALLRGIPNFAPIAVDDEAVAILPLHPGMSLRRAKALLADETLKGLVLYSYGVGNPPSFKGELLSALTAANERGIALLNVTQCVQGEVVQGAYATGAALNKSGVIAGSDITLEAAVAKLTVLIGRGLEGGALRQALKSAVRGECS 804
            L AQL SHWQRYDAFVVLHGTDTMA SA+ALSFMLGAL+KPVIFTGSQIPLGEPRSDALNNVVSALQLAAH ++P EVSLAFHDRLLRGNRARKVRTQG DAF SPNFPWL ELGIG+  +  +AL  G PNFAPI +D EAVA+LPLHPGMSLRRAKALLAD++LKGLVLYSYGVGNPPSF+GELLSALTAANERG+ALLNVTQC QG+VVQGAYATGAALN++GV+AG+DIT EAAVAKLTVL+GRG+ G  LRQAL SA+RGECS
Sbjct:   69 LVAQLESHWQRYDAFVVLHGTDTMACSAAALSFMLGALNKPVIFTGSQIPLGEPRSDALNNVVSALQLAAHPDTPREVSLAFHDRLLRGNRARKVRTQGLDAFDSPNFPWLGELGIGITLNVDSALAAGTPNFAPIDLDPEAVALLPLHPGMSLRRAKALLADDSLKGLVLYSYGVGNPPSFEGELLSALTAANERGVALLNVTQCAQGDVVQGAYATGAALNRAGVVAGADITPEAAVAKLTVLLGRGMCGLELRQALNSALRGECS 336          
BLAST of mRNA_E-siliculosus-1a_F_contig14937.2872.1 vs. uniprot
Match: A0A7Z0LNL5_9GAMM (Asparaginase n=1 Tax=Halomonas salicampi TaxID=1449798 RepID=A0A7Z0LNL5_9GAMM)

HSP 1 Score: 437 bits (1125), Expect = 2.200e-152
Identity = 220/269 (81.78%), Postives = 242/269 (89.96%), Query Frame = 1
Query:    1 LAAQLGSHWQRYDAFVVLHGTDTMAYSASALSFMLGALDKPVIFTGSQIPLGEPRSDALNNVVSALQLAAHQESPCEVSLAFHDRLLRGNRARKVRTQGFDAFGSPNFPWLAELGIGMRFHPTTALLRGIPNFAPIAVDDEAVAILPLHPGMSLRRAKALLADETLKGLVLYSYGVGNPPSFKGELLSALTAANERGIALLNVTQCVQGEVVQGAYATGAALNKSGVIAGSDITLEAAVAKLTVLIGRGLEGGALRQALKSAVRGECSV 807
            L AQL SHW RYDAF+VLHGTDTMAYSA+ALSFMLGALDKPVIFTGSQIPLGEPRSDAL+NVVSALQLAAH ++PCEVSL FHDRLLRGNRARKVRTQG DAF SPNFPWL ELGIG+  +   AL  G P+F+PI +D +AVA+LPLHPGMSLRRAK LLADETLKGLVLYSYGVGNPPSF+GELLSALTAANERG+ALLNVTQC QG+VVQGAYATGAALNK+GVIAG DI+ EA VAKL VL+G+G++G ALRQAL SA+RGECS 
Sbjct:   69 LVAQLKSHWHRYDAFIVLHGTDTMAYSAAALSFMLGALDKPVIFTGSQIPLGEPRSDALSNVVSALQLAAHPDTPCEVSLVFHDRLLRGNRARKVRTQGLDAFDSPNFPWLGELGIGVSLNQQAALPTGTPSFSPIELDPDAVAVLPLHPGMSLRRAKMLLADETLKGLVLYSYGVGNPPSFEGELLSALTAANERGVALLNVTQCEQGDVVQGAYATGAALNKAGVIAGGDISPEAGVAKLIVLLGQGIQGVALRQALTSALRGECSA 337          
BLAST of mRNA_E-siliculosus-1a_F_contig14937.2872.1 vs. uniprot
Match: UPI0004A9F875 (asparaginase domain-containing protein n=3 Tax=Halomonas TaxID=2745 RepID=UPI0004A9F875)

HSP 1 Score: 436 bits (1120), Expect = 1.030e-151
Identity = 219/269 (81.41%), Postives = 240/269 (89.22%), Query Frame = 1
Query:    1 LAAQLGSHWQRYDAFVVLHGTDTMAYSASALSFMLGALDKPVIFTGSQIPLGEPRSDALNNVVSALQLAAHQESPCEVSLAFHDRLLRGNRARKVRTQGFDAFGSPNFPWLAELGIGMRFHPTTALLRGIPNFAPIAVDDEAVAILPLHPGMSLRRAKALLADETLKGLVLYSYGVGNPPSFKGELLSALTAANERGIALLNVTQCVQGEVVQGAYATGAALNKSGVIAGSDITLEAAVAKLTVLIGRGLEGGALRQALKSAVRGECSV 807
            L AQL SHWQ YD FVVLHGTDTMA+SA+ALSFMLGAL+KPVIFTG+QIPLGE RSDALNN+VSALQL  H  +PCEVSL FHDRLLRGNRARKVRTQG DAF SPNFPWLAELGIGM F   +ALL G+PNF PI VDDEAVAILPLHPGMSLRRAK LLADE LKGL+L+SYGVGNPPSF+GELL ALTAANERG+ALLNVTQC QGEVVQGAYATGAALN++GVIAG DITLEAA+AKLTVL+GRG+ G ALR+AL  ++RGEC+ 
Sbjct:   69 LVAQLESHWQAYDGFVVLHGTDTMAFSAAALSFMLGALNKPVIFTGAQIPLGELRSDALNNLVSALQLVVHPATPCEVSLVFHDRLLRGNRARKVRTQGLDAFDSPNFPWLAELGIGMTFPQPSALLSGLPNFTPIEVDDEAVAILPLHPGMSLRRAKLLLADERLKGLILHSYGVGNPPSFEGELLKALTAANERGVALLNVTQCAQGEVVQGAYATGAALNQAGVIAGGDITLEAAMAKLTVLLGRGVSGPALRKALGGSLRGECNA 337          
BLAST of mRNA_E-siliculosus-1a_F_contig14937.2872.1 vs. uniprot
Match: A0A060B363_9GAMM (Asparaginase n=8 Tax=Halomonas TaxID=2745 RepID=A0A060B363_9GAMM)

HSP 1 Score: 435 bits (1118), Expect = 1.930e-151
Identity = 219/268 (81.72%), Postives = 243/268 (90.67%), Query Frame = 1
Query:    1 LAAQLGSHWQRYDAFVVLHGTDTMAYSASALSFMLGALDKPVIFTGSQIPLGEPRSDALNNVVSALQLAAHQESPCEVSLAFHDRLLRGNRARKVRTQGFDAFGSPNFPWLAELGIGMRFHPTTALLRGIPNFAPIAVDDEAVAILPLHPGMSLRRAKALLADETLKGLVLYSYGVGNPPSFKGELLSALTAANERGIALLNVTQCVQGEVVQGAYATGAALNKSGVIAGSDITLEAAVAKLTVLIGRGLEGGALRQALKSAVRGECS 804
            L AQL SHWQ YD FVVLHGTDTMAYSA+ALSFMLGAL+KPVIFTG+QIPLGEPRSDALNN+VSALQL A+  +PCEVSL FHDRLLRGNRARKVRTQG DAF SPNFPWLAELGI + +   +ALL G P+F+PI VDDEAVAILPL+PGMSLRRAKALLADE LKGL+L+SYGVGNPPSF+GELL+ALTAANERG+ALLNVTQC QGEVVQGAYATGAALN++GVIAG DITLEAAVAKLTVL+GRG+ G ALR+AL  ++RGECS
Sbjct:   69 LVAQLESHWQTYDGFVVLHGTDTMAYSAAALSFMLGALNKPVIFTGAQIPLGEPRSDALNNLVSALQLVANSATPCEVSLVFHDRLLRGNRARKVRTQGLDAFDSPNFPWLAELGIAISYPQPSALLSGRPDFSPIEVDDEAVAILPLYPGMSLRRAKALLADERLKGLILHSYGVGNPPSFEGELLTALTAANERGVALLNVTQCAQGEVVQGAYATGAALNQAGVIAGGDITLEAAVAKLTVLLGRGMSGPALRRALSGSLRGECS 336          
BLAST of mRNA_E-siliculosus-1a_F_contig14937.2872.1 vs. uniprot
Match: A0A386X0D2_9GAMM (Asparaginase n=8 Tax=Halomonas TaxID=2745 RepID=A0A386X0D2_9GAMM)

HSP 1 Score: 434 bits (1117), Expect = 2.740e-151
Identity = 219/268 (81.72%), Postives = 242/268 (90.30%), Query Frame = 1
Query:    1 LAAQLGSHWQRYDAFVVLHGTDTMAYSASALSFMLGALDKPVIFTGSQIPLGEPRSDALNNVVSALQLAAHQESPCEVSLAFHDRLLRGNRARKVRTQGFDAFGSPNFPWLAELGIGMRFHPTTALLRGIPNFAPIAVDDEAVAILPLHPGMSLRRAKALLADETLKGLVLYSYGVGNPPSFKGELLSALTAANERGIALLNVTQCVQGEVVQGAYATGAALNKSGVIAGSDITLEAAVAKLTVLIGRGLEGGALRQALKSAVRGECS 804
            L AQL SHWQ YD FVVLHGTDTMAYSA+ALSFMLGAL+KPVIFTG+QIPLGEPRSDALNN+VSALQL A+  +PCEVSL FHDRLLRGNRARKVRTQG DAF SPNFPWLAELGI + +   +ALL G P+FAPI VDDE VAILPL+PGMSLRRAKALLADE LKGL+L+SYGVGNPPSF+GELL+ALTAANERG+ALLNVTQC QGEVVQGAYATGAALN++GVIAG DITLEAAVAKLTVL+GRG+ G ALR+AL  ++RGECS
Sbjct:   69 LVAQLESHWQTYDGFVVLHGTDTMAYSAAALSFMLGALNKPVIFTGAQIPLGEPRSDALNNLVSALQLVANSATPCEVSLVFHDRLLRGNRARKVRTQGLDAFDSPNFPWLAELGIAISYPQPSALLSGRPDFAPIEVDDETVAILPLYPGMSLRRAKALLADERLKGLILHSYGVGNPPSFEGELLTALTAANERGVALLNVTQCAQGEVVQGAYATGAALNQAGVIAGGDITLEAAVAKLTVLLGRGMSGPALRRALSGSLRGECS 336          
BLAST of mRNA_E-siliculosus-1a_F_contig14937.2872.1 vs. uniprot
Match: A0A653WCR5_9GAMM (Asparaginase n=11 Tax=Halomonas TaxID=2745 RepID=A0A653WCR5_9GAMM)

HSP 1 Score: 432 bits (1111), Expect = 2.320e-150
Identity = 220/268 (82.09%), Postives = 239/268 (89.18%), Query Frame = 1
Query:    1 LAAQLGSHWQRYDAFVVLHGTDTMAYSASALSFMLGALDKPVIFTGSQIPLGEPRSDALNNVVSALQLAAHQESPCEVSLAFHDRLLRGNRARKVRTQGFDAFGSPNFPWLAELGIGMRFHPTTALLRGIPNFAPIAVDDEAVAILPLHPGMSLRRAKALLADETLKGLVLYSYGVGNPPSFKGELLSALTAANERGIALLNVTQCVQGEVVQGAYATGAALNKSGVIAGSDITLEAAVAKLTVLIGRGLEGGALRQALKSAVRGECS 804
            L AQL  HW  Y+AFV+LHGTDTMAYSA+ALSFMLGAL+KPVIFTGSQIPLGEPRSDALNNV SALQLA H  +PCEVSL FHDRLLRGNRARKVRTQG DAF SPNFPWLAELGIG+ F   +ALL G PNFAPI VDDEAVA+LPLHPGMSLRRAKALLAD+TLKGLVLYSYGVGNP SF+GELL AL AA+ERG+ALLNVTQC QGEVVQGAYATGAALN++GVIAGSDITLEAA+AKLTVLIG+GL G  L +AL + +RGECS
Sbjct:   69 LVAQLEIHWSCYEAFVILHGTDTMAYSAAALSFMLGALNKPVIFTGSQIPLGEPRSDALNNVFSALQLAVHPATPCEVSLVFHDRLLRGNRARKVRTQGLDAFDSPNFPWLAELGIGINFPQPSALLSGKPNFAPIEVDDEAVAVLPLHPGMSLRRAKALLADKTLKGLVLYSYGVGNPLSFEGELLDALKAASERGVALLNVTQCAQGEVVQGAYATGAALNQAGVIAGSDITLEAAIAKLTVLIGQGLVGSMLSKALSAPMRGECS 336          
BLAST of mRNA_E-siliculosus-1a_F_contig14937.2872.1 vs. uniprot
Match: A0A265E102_9GAMM (L-asparaginase 1 n=8 Tax=Halomonas TaxID=2745 RepID=A0A265E102_9GAMM)

HSP 1 Score: 431 bits (1109), Expect = 4.680e-150
Identity = 219/266 (82.33%), Postives = 241/266 (90.60%), Query Frame = 1
Query:    1 LAAQLGSHWQRYDAFVVLHGTDTMAYSASALSFMLGALDKPVIFTGSQIPLGEPRSDALNNVVSALQLAAHQESPCEVSLAFHDRLLRGNRARKVRTQGFDAFGSPNFPWLAELGIGMRFHPTTALLRGIPNFAPIAVDDEAVAILPLHPGMSLRRAKALLADETLKGLVLYSYGVGNPPSFKGELLSALTAANERGIALLNVTQCVQGEVVQGAYATGAALNKSGVIAGSDITLEAAVAKLTVLIGRGLEGGALRQALKSAVRGE 798
            L AQL +HW RYDAFVVLHGTDTMAYSA+ALSFMLGAL+KPVIFTGSQIPLGEPRSDALNNVVSALQLAAH  +PCEVSLAFHDRLLRGNRA KVRTQG DAF SPNFPWLAELGIG+RF   +ALL G+PNFAPI VDDEAVA+LPLHPGMSLRRAKALL DETL+GLVL+SYGVGNPPSF+GELL+AL AANE+G+ALLNVTQC QGEVVQGAYATGA LN++GVI G DITLEAA+AKL VL G+GL G AL +AL +++RGE
Sbjct:   69 LVAQLENHWPRYDAFVVLHGTDTMAYSAAALSFMLGALNKPVIFTGSQIPLGEPRSDALNNVVSALQLAAHPATPCEVSLAFHDRLLRGNRACKVRTQGLDAFDSPNFPWLAELGIGIRFTQPSALLSGLPNFAPIEVDDEAVAVLPLHPGMSLRRAKALLEDETLRGLVLHSYGVGNPPSFEGELLNALKAANEQGVALLNVTQCAQGEVVQGAYATGAELNQAGVIPGGDITLEAAIAKLIVLTGQGLVGQALCKALSASLRGE 334          
BLAST of mRNA_E-siliculosus-1a_F_contig14937.2872.1 vs. uniprot
Match: UPI0018747631 (asparaginase n=1 Tax=Halomonas johnsoniae TaxID=502832 RepID=UPI0018747631)

HSP 1 Score: 430 bits (1105), Expect = 1.900e-149
Identity = 218/268 (81.34%), Postives = 239/268 (89.18%), Query Frame = 1
Query:    1 LAAQLGSHWQRYDAFVVLHGTDTMAYSASALSFMLGALDKPVIFTGSQIPLGEPRSDALNNVVSALQLAAHQESPCEVSLAFHDRLLRGNRARKVRTQGFDAFGSPNFPWLAELGIGMRFHPTTALLRGIPNFAPIAVDDEAVAILPLHPGMSLRRAKALLADETLKGLVLYSYGVGNPPSFKGELLSALTAANERGIALLNVTQCVQGEVVQGAYATGAALNKSGVIAGSDITLEAAVAKLTVLIGRGLEGGALRQALKSAVRGECS 804
            L A L +HWQ YDAFV+LHGTDTMAYSASALSFMLGAL+KPVIFTGSQIPLGEPRSDALNNVVSALQLAAH  +PCEVSL FHDRLLRGNRARKVRTQG DAF S NFPWLAE+GIG+ F   +ALL G PNFAPI +DDEAVA+LPLHPGMSL RAKALLAD+TLKG+VL+SYGVGNPPSF G LL AL AA ERG+ALLNVTQC QGEV+QGAYATGAALN++GVIAG DITLEAAVAKL VL+GRGL G ALR+AL++A+RGE S
Sbjct:   69 LVAALATHWQAYDAFVILHGTDTMAYSASALSFMLGALNKPVIFTGSQIPLGEPRSDALNNVVSALQLAAHPATPCEVSLVFHDRLLRGNRARKVRTQGLDAFDSLNFPWLAEIGIGITFPQPSALLSGEPNFAPIELDDEAVAVLPLHPGMSLTRAKALLADDTLKGVVLHSYGVGNPPSFDGALLDALKAAQERGVALLNVTQCAQGEVIQGAYATGAALNQAGVIAGGDITLEAAVAKLIVLLGRGLSGPALRKALRTAIRGERS 336          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig14937.2872.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0P8BDE0_9GAMM6.050e-15685.39L-asparaginase n=5 Tax=Halomonas TaxID=2745 RepID=... [more]
A0A7Y6RAL6_9GAMM2.100e-15384.70Asparaginase n=1 Tax=Halomonas maris TaxID=2729617... [more]
A0A2A4HK55_9GAMM6.230e-15383.58L-asparaginase 1 n=2 Tax=Halomonas TaxID=2745 RepI... [more]
A0A7Z0LNL5_9GAMM2.200e-15281.78Asparaginase n=1 Tax=Halomonas salicampi TaxID=144... [more]
UPI0004A9F8751.030e-15181.41asparaginase domain-containing protein n=3 Tax=Hal... [more]
A0A060B363_9GAMM1.930e-15181.72Asparaginase n=8 Tax=Halomonas TaxID=2745 RepID=A0... [more]
A0A386X0D2_9GAMM2.740e-15181.72Asparaginase n=8 Tax=Halomonas TaxID=2745 RepID=A0... [more]
A0A653WCR5_9GAMM2.320e-15082.09Asparaginase n=11 Tax=Halomonas TaxID=2745 RepID=A... [more]
A0A265E102_9GAMM4.680e-15082.33L-asparaginase 1 n=8 Tax=Halomonas TaxID=2745 RepI... [more]
UPI00187476311.900e-14981.34asparaginase n=1 Tax=Halomonas johnsoniae TaxID=50... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig14937contigE-siliculosus-1a_F_contig14937:216..1031 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start0
Stop1
Cds size816
Model size816
Exons1
Hectar predicted targeting categoryother localisation
BRITEko00000,ko00001,ko01000
Best eggNOG OGNA|NA|NA
Best tax levelOceanospirillales
BiGG ReactioniECO103_1326.ECO103_1961,iSF_1195.SF1456,iS_1188.S1571,iYL1228.KPN_01203
COG Functional cat.EJ
EC3.5.1.1
EggNOG OGs1MWIR@1224,1RMUB@1236,1XHXN@135619,COG0252@1,COG0252@2
EggNOG free text desc.PFAM Asparaginase glutaminase
GOsGO:0003674,GO:0003824,GO:0004067,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006528,GO:0006530,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009064,GO:0009065,GO:0009066,GO:0009068,GO:0009987,GO:0016054,GO:0016787,GO:0016810,GO:0016811,GO:0019752,GO:0032787,GO:0033345,GO:0034641,GO:0042802,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0071704,GO:0072329,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606
KEGG Pathwayko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110
KEGG ReactionR00485
KEGG koko:K01424
KEGG rclassRC00010,RC02798
Preferred nameansA
Seed eggNOG ortholog1479235.KK366039_gene1566
Seed ortholog evalue6.5e-124
Seed ortholog score450.3
Taxonomic scopeBacteria
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928005.8627832-CDS-E-siliculosus-1a_F_contig14937:215..10311622928005.8627832-CDS-E-siliculosus-1a_F_contig14937:215..1031Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig14937 216..1031 -
1696318769.137371-CDS-E-siliculosus-1a_F_contig14937:215..10311696318769.137371-CDS-E-siliculosus-1a_F_contig14937:215..1031Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig14937 216..1031 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig14937.2872.1prot_E-siliculosus-1a_F_contig14937.2872.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig14937 216..1031 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig14937.2872.1

>prot_E-siliculosus-1a_F_contig14937.2872.1 ID=prot_E-siliculosus-1a_F_contig14937.2872.1|Name=mRNA_E-siliculosus-1a_F_contig14937.2872.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=272bp
LAAQLGSHWQRYDAFVVLHGTDTMAYSASALSFMLGALDKPVIFTGSQIP
LGEPRSDALNNVVSALQLAAHQESPCEVSLAFHDRLLRGNRARKVRTQGF
DAFGSPNFPWLAELGIGMRFHPTTALLRGIPNFAPIAVDDEAVAILPLHP
GMSLRRAKALLADETLKGLVLYSYGVGNPPSFKGELLSALTAANERGIAL
LNVTQCVQGEVVQGAYATGAALNKSGVIAGSDITLEAAVAKLTVLIGRGL
EGGALRQALKSAVRGECSVAR*
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mRNA from alignment at E-siliculosus-1a_F_contig14937:216..1031-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig14937.2872.1 ID=mRNA_E-siliculosus-1a_F_contig14937.2872.1|Name=mRNA_E-siliculosus-1a_F_contig14937.2872.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=816bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig14937:216..1031- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CTGGCGGCCCAGCTGGGAAGCCACTGGCAACGCTACGATGCCTTTGTAGT GCTACATGGCACCGATACCATGGCGTATAGCGCGTCAGCGCTTTCGTTTA TGCTCGGTGCATTAGACAAGCCTGTGATCTTCACAGGCTCCCAAATTCCG CTGGGGGAGCCCCGTAGCGATGCGCTGAATAATGTGGTCAGTGCACTACA GCTAGCGGCGCATCAAGAGTCTCCTTGCGAAGTTAGCTTGGCGTTTCATG ACCGATTGCTGCGCGGCAATCGGGCACGCAAAGTGCGCACTCAAGGCTTC GATGCTTTCGGCTCTCCTAATTTCCCCTGGCTTGCCGAGCTCGGTATCGG CATGCGTTTCCATCCAACCACAGCACTGCTTAGGGGTATTCCAAATTTTG CGCCTATAGCGGTGGACGATGAGGCGGTAGCGATTTTACCGCTGCACCCT GGTATGTCGCTACGCCGTGCCAAGGCACTACTGGCCGATGAAACCCTAAA AGGTCTGGTGCTTTATAGCTACGGCGTTGGCAACCCGCCCAGCTTTAAAG GGGAGCTGCTAAGCGCCTTAACGGCTGCCAACGAACGAGGTATAGCGCTG CTCAACGTTACCCAGTGTGTCCAAGGTGAGGTGGTACAGGGTGCTTACGC TACCGGCGCCGCGCTTAATAAATCAGGTGTTATCGCTGGCAGCGACATCA CTCTAGAAGCCGCCGTGGCAAAGCTCACTGTTCTGATCGGTCGTGGGTTA GAAGGTGGTGCACTGCGACAAGCACTGAAGAGTGCTGTCAGGGGAGAATG CAGTGTCGCACGTTAA
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig14937:216..1031-

>mRNA_E-siliculosus-1a_F_contig14937.2872.1 ID=mRNA_E-siliculosus-1a_F_contig14937.2872.1|Name=mRNA_E-siliculosus-1a_F_contig14937.2872.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1632bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig14937:216..1031- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CTGGCGGCCCAGCTGGGAAGCCACTGGCAACGCTACGATGCCTTTGTAGT
GCTACATGGCACCGATACCATGGCGTATAGCGCGTCAGCGCTTTCGTTTA
TGCTCGGTGCATTAGACAAGCCTGTGATCTTCACAGGCTCCCAAATTCCG
CTGGGGGAGCCCCGTAGCGATGCGCTGAATAATGTGGTCAGTGCACTACA
GCTAGCGGCGCATCAAGAGTCTCCTTGCGAAGTTAGCTTGGCGTTTCATG
ACCGATTGCTGCGCGGCAATCGGGCACGCAAAGTGCGCACTCAAGGCTTC
GATGCTTTCGGCTCTCCTAATTTCCCCTGGCTTGCCGAGCTCGGTATCGG
CATGCGTTTCCATCCAACCACAGCACTGCTTAGGGGTATTCCAAATTTTG
CGCCTATAGCGGTGGACGATGAGGCGGTAGCGATTTTACCGCTGCACCCT
GGTATGTCGCTACGCCGTGCCAAGGCACTACTGGCCGATGAAACCCTAAA
AGGTCTGGTGCTTTATAGCTACGGCGTTGGCAACCCGCCCAGCTTTAAAG
GGGAGCTGCTAAGCGCCTTAACGGCTGCCAACGAACGAGGTATAGCGCTG
CTCAACGTTACCCAGTGTGTCCAAGGTGAGGTGGTACAGGGTGCTTACGC
TACCGGCGCCGCGCTTAATAAATCAGGTGTTATCGCTGGCAGCGACATCA
CTCTAGAAGCCGCCGTGGCAAAGCTCACTGTTCTGATCGGTCGTGGGTTA
GAAGGTGGTGCACTGCGACAAGCACTGAAGAGTGCTGTCAGGGGAGAATG
CAGTGTCGCACGTTAACTGGCGGCCCAGCTGGGAAGCCACTGGCAACGCT
ACGATGCCTTTGTAGTGCTACATGGCACCGATACCATGGCGTATAGCGCG
TCAGCGCTTTCGTTTATGCTCGGTGCATTAGACAAGCCTGTGATCTTCAC
AGGCTCCCAAATTCCGCTGGGGGAGCCCCGTAGCGATGCGCTGAATAATG
TGGTCAGTGCACTACAGCTAGCGGCGCATCAAGAGTCTCCTTGCGAAGTT
AGCTTGGCGTTTCATGACCGATTGCTGCGCGGCAATCGGGCACGCAAAGT
GCGCACTCAAGGCTTCGATGCTTTCGGCTCTCCTAATTTCCCCTGGCTTG
CCGAGCTCGGTATCGGCATGCGTTTCCATCCAACCACAGCACTGCTTAGG
GGTATTCCAAATTTTGCGCCTATAGCGGTGGACGATGAGGCGGTAGCGAT
TTTACCGCTGCACCCTGGTATGTCGCTACGCCGTGCCAAGGCACTACTGG
CCGATGAAACCCTAAAAGGTCTGGTGCTTTATAGCTACGGCGTTGGCAAC
CCGCCCAGCTTTAAAGGGGAGCTGCTAAGCGCCTTAACGGCTGCCAACGA
ACGAGGTATAGCGCTGCTCAACGTTACCCAGTGTGTCCAAGGTGAGGTGG
TACAGGGTGCTTACGCTACCGGCGCCGCGCTTAATAAATCAGGTGTTATC
GCTGGCAGCGACATCACTCTAGAAGCCGCCGTGGCAAAGCTCACTGTTCT
GATCGGTCGTGGGTTAGAAGGTGGTGCACTGCGACAAGCACTGAAGAGTG
CTGTCAGGGGAGAATGCAGTGTCGCACGTTAA
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