mRNA_E-siliculosus-1a_F_contig14921.2864.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig14921.2864.1 vs. uniprot
Match: UPI001BFFD016 (hypothetical protein n=2 Tax=Zobellia TaxID=112040 RepID=UPI001BFFD016) HSP 1 Score: 238 bits (606), Expect = 6.500e-76 Identity = 110/154 (71.43%), Postives = 126/154 (81.82%), Query Frame = 1
Query: 52 GCKEQPKTMETSEDMVKVQEVQKRLVPTSWVTKRVQRAKLKLEQTDAGKVVWNAMEAHGGLKKWFNNGALSFRFNYQPLDGSTQRDSYQTIDTWSNKARHTSAADSTAYFGWDGKTAWVHAKDSTAFAYDTKFWALTPIYFLGQPFILDGEGVN 513
C EQPK+ ++ V ++ Q ++P SWV RV++AK KLEQ++AGK+VW AMEAHGGLK W+ NGALSFRFNYQPLDGSTQRDSYQ +D W NKA HTSA DSTA FGWDGKTAWV AKDSTAFAYDTKFWALTP+Y +G PFILDGEGVN
Sbjct: 19 SCNEQPKSKKSETTAVVQEQAQDYVIPESWVNNRVEKAKDKLEQSEAGKIVWAAMEAHGGLKNWYGNGALSFRFNYQPLDGSTQRDSYQVVDVWRNKAVHTSATDSTARFGWDGKTAWVQAKDSTAFAYDTKFWALTPLYLMGHPFILDGEGVN 172
BLAST of mRNA_E-siliculosus-1a_F_contig14921.2864.1 vs. uniprot
Match: A0A5B7SQH3_9FLAO (Uncharacterized protein n=1 Tax=Aggregatimonas sangjinii TaxID=2583587 RepID=A0A5B7SQH3_9FLAO) HSP 1 Score: 236 bits (602), Expect = 2.540e-75 Identity = 116/172 (67.44%), Postives = 138/172 (80.23%), Query Frame = 1
Query: 1 MRTTLIILSTSLLILSLGCKEQPKTMETSEDMVKVQEVQKR-LVPTSWVTKRVQRAKLKLEQTDAGKVVWNAMEAHGGLKKWFNNGALSFRFNYQPLDGSTQRDSYQTIDTWSNKARHTSAADSTAYFGWDGKTAWVHAKDSTAFAYDTKFWALTPIYFLGQPFILDGEGVN 513
M+ + +L+ LL + CKEQPK ET D K EV +VP +W+T RV++AK +L TDAG ++WNAMEAHGGL+ W+ NGALSFRF+Y+PLDGSTQRDSYQTIDTWSN+ARHTSA DSTA+FGW G+TAWV A+DSTAFAYDTKFWALTP YFL QPF+LDGEGVN
Sbjct: 1 MKIAIQLLTLCLLTMVYACKEQPKKPET--DSKKETEVTNNAMVPEAWITTRVKKAKNRLAATDAGNIIWNAMEAHGGLENWYANGALSFRFDYKPLDGSTQRDSYQTIDTWSNRARHTSATDSTAHFGWTGETAWVKAQDSTAFAYDTKFWALTPYYFLAQPFVLDGEGVN 170
BLAST of mRNA_E-siliculosus-1a_F_contig14921.2864.1 vs. uniprot
Match: UPI00188DA806 (hypothetical protein n=2 Tax=Zobellia roscoffensis TaxID=2779508 RepID=UPI00188DA806) HSP 1 Score: 233 bits (593), Expect = 5.870e-74 Identity = 110/165 (66.67%), Postives = 130/165 (78.79%), Query Frame = 1
Query: 19 ILSTSLLILSLGCKEQPKTMETSEDMVKVQEVQKRLVPTSWVTKRVQRAKLKLEQTDAGKVVWNAMEAHGGLKKWFNNGALSFRFNYQPLDGSTQRDSYQTIDTWSNKARHTSAADSTAYFGWDGKTAWVHAKDSTAFAYDTKFWALTPIYFLGQPFILDGEGVN 513
+L +S++++S C EQPK + + D + ++P SWV RV++AK +LE TDAGK+VW AMEAHGGLK W+ NGALSFRFNYQPLDGSTQRDSYQ +D W NKA HTS DSTA FGWDG+TAWV AKDSTAFAYDTKFWALTP+Y +G PFILDGEGVN
Sbjct: 8 LLMSSVILMS-SCNEQPKAKKEATDTAAQEVSDSYVIPESWVNNRVEKAKSRLEVTDAGKIVWAAMEAHGGLKNWYGNGALSFRFNYQPLDGSTQRDSYQVVDVWRNKAVHTSTTDSTATFGWDGETAWVKAKDSTAFAYDTKFWALTPLYLMGHPFILDGEGVN 171
BLAST of mRNA_E-siliculosus-1a_F_contig14921.2864.1 vs. uniprot
Match: A0A7X2ZR23_9FLAO (Uncharacterized protein n=2 Tax=Zobellia TaxID=112040 RepID=A0A7X2ZR23_9FLAO) HSP 1 Score: 231 bits (590), Expect = 1.620e-73 Identity = 113/171 (66.08%), Postives = 130/171 (76.02%), Query Frame = 1
Query: 1 MRTTLIILSTSLLILSLGCKEQPKTMETSEDMVKVQEVQKRLVPTSWVTKRVQRAKLKLEQTDAGKVVWNAMEAHGGLKKWFNNGALSFRFNYQPLDGSTQRDSYQTIDTWSNKARHTSAADSTAYFGWDGKTAWVHAKDSTAFAYDTKFWALTPIYFLGQPFILDGEGVN 513
M TT+I +S CKEQPK + + + + VQ VP SWV RV +AK +LE+TDAGK+VW+AM AHGGLK W+ NGALSFRFNYQPLDGSTQRDSYQ +D W NKA HTS DSTA FGWDG+TAWV AKDSTAFAYDTKFWALTP+Y +G PFI+DGEGVN
Sbjct: 8 MLTTIIFMS--------SCKEQPKEEKLAAQEMSKEMVQDFTVPESWVNNRVSKAKDRLEKTDAGKIVWSAMGAHGGLKNWYGNGALSFRFNYQPLDGSTQRDSYQVVDVWRNKAVHTSVTDSTAKFGWDGETAWVKAKDSTAFAYDTKFWALTPLYLMGHPFIIDGEGVN 170
BLAST of mRNA_E-siliculosus-1a_F_contig14921.2864.1 vs. uniprot
Match: G0LCE6_ZOBGA (Conserved hypothetical lipoprotein n=5 Tax=Zobellia TaxID=112040 RepID=G0LCE6_ZOBGA) HSP 1 Score: 231 bits (589), Expect = 2.850e-73 Identity = 106/154 (68.83%), Postives = 123/154 (79.87%), Query Frame = 1
Query: 52 GCKEQPKTMETSEDMVKVQEVQKRLVPTSWVTKRVQRAKLKLEQTDAGKVVWNAMEAHGGLKKWFNNGALSFRFNYQPLDGSTQRDSYQTIDTWSNKARHTSAADSTAYFGWDGKTAWVHAKDSTAFAYDTKFWALTPIYFLGQPFILDGEGVN 513
C E+PK + D K ++V +P +W+ KRV++AK KLE+TDAGKVVW AMEAHGGLK W+ NGAL+FRFNYQPLDGSTQRDSYQ +D W NKA HTSA DSTA FGWDG TAWV AKDSTAFAYDT+FWALTP+Y G PF+LDGEGV+
Sbjct: 21 ACNEKPKAKKEVVDTAKEEKVVDYTIPEAWINKRVEKAKAKLEKTDAGKVVWAAMEAHGGLKNWYGNGALAFRFNYQPLDGSTQRDSYQVVDVWRNKAVHTSAVDSTAKFGWDGATAWVQAKDSTAFAYDTRFWALTPLYLFGHPFVLDGEGVH 174
BLAST of mRNA_E-siliculosus-1a_F_contig14921.2864.1 vs. uniprot
Match: A0A3Q9FI00_9FLAO (Uncharacterized protein n=2 Tax=unclassified Maribacter TaxID=2615042 RepID=A0A3Q9FI00_9FLAO) HSP 1 Score: 230 bits (586), Expect = 7.390e-73 Identity = 115/169 (68.05%), Postives = 129/169 (76.33%), Query Frame = 1
Query: 10 TLIILSTSLLILSLGCKEQPKTMETSEDMVKVQEVQKRLVPTSWVTKRVQRAKLKLEQTDAGKVVWNAMEAHGGLKKWFNNGALSFRFNYQPLDGS-TQRDSYQTIDTWSNKARHTSAADSTAYFGWDGKTAWVHAKDSTAFAYDTKFWALTPIYFLGQPFILDGEGVN 513
TLIILS + LGCKE PK E + + VPT+W+T RV +AK KL +TDAGKVVWNAMEAHGGL W+ NG LSFRFNYQPLD + QRDSYQT+DTWSNKARHTSA +STA++GW G TAW+ A DS AF YDTKFWALTPIYFLGQPFILDGEGVN
Sbjct: 10 TLIILS-----VFLGCKETPKNAEDKDSIANEAMSANATVPTAWITNRVAKAKEKLNRTDAGKVVWNAMEAHGGLDTWYGNGPLSFRFNYQPLDTTKAQRDSYQTVDTWSNKARHTSATESTAHYGWSGTTAWIKAADSLAFKYDTKFWALTPIYFLGQPFILDGEGVN 173
BLAST of mRNA_E-siliculosus-1a_F_contig14921.2864.1 vs. uniprot
Match: A0A6I2MU51_9FLAO (Uncharacterized protein n=1 Tax=Maribacter luteus TaxID=2594478 RepID=A0A6I2MU51_9FLAO) HSP 1 Score: 226 bits (576), Expect = 2.340e-71 Identity = 110/171 (64.33%), Postives = 131/171 (76.61%), Query Frame = 1
Query: 1 MRTTLIILSTSLLILSLGCKEQPKTMETSEDMVKVQEVQKRLVPTSWVTKRVQRAKLKLEQTDAGKVVWNAMEAHGGLKKWFNNGALSFRFNYQPLDGSTQRDSYQTIDTWSNKARHTSAADSTAYFGWDGKTAWVHAKDSTAFAYDTKFWALTPIYFLGQPFILDGEGVN 513
M+ +I + T +++LS CKEQPK + E VQ +P SWV KRV +AK +L ++DAGK+VW MEAHGGL KWF+NGALSFRFNYQPL+G TQRDSYQ +D W NKA HTS DSTA +GWDGKTAWV AKDSTAFAYDTKFWALTP+Y +G PF+LDGEGV+
Sbjct: 1 MKVMIIGMFTMVILLS-SCKEQPKENKPEEQETHKVMVQDYSIPESWVKKRVSKAKERLGKSDAGKIVWAGMEAHGGLGKWFSNGALSFRFNYQPLEGKTQRDSYQVVDVWRNKAVHTSVTDSTAKYGWDGKTAWVKAKDSTAFAYDTKFWALTPLYLMGHPFVLDGEGVH 170
BLAST of mRNA_E-siliculosus-1a_F_contig14921.2864.1 vs. uniprot
Match: A0A844N181_9FLAO (Uncharacterized protein n=4 Tax=Zobellia TaxID=112040 RepID=A0A844N181_9FLAO) HSP 1 Score: 226 bits (575), Expect = 3.220e-71 Identity = 103/154 (66.88%), Postives = 121/154 (78.57%), Query Frame = 1
Query: 52 GCKEQPKTMETSEDMVKVQEVQKRLVPTSWVTKRVQRAKLKLEQTDAGKVVWNAMEAHGGLKKWFNNGALSFRFNYQPLDGSTQRDSYQTIDTWSNKARHTSAADSTAYFGWDGKTAWVHAKDSTAFAYDTKFWALTPIYFLGQPFILDGEGVN 513
C EQPK + + ++V + L+P +WV KRV++AK KLE++DAGK+VW MEAHGGLK W+ NGALSFRFNYQPLDGST RDSY+ +D W NKA HTS DSTA FGWDG+TAWV AKDSTAFAYDTKFWALTP+Y PF+LDGEGVN
Sbjct: 19 SCNEQPKDKKEATEVVTEAVTEDYLIPEAWVNKRVEKAKSKLEKSDAGKIVWAGMEAHGGLKNWYGNGALSFRFNYQPLDGSTVRDSYEVVDAWRNKAVHTSVTDSTATFGWDGETAWVQAKDSTAFAYDTKFWALTPLYLFAHPFVLDGEGVN 172
BLAST of mRNA_E-siliculosus-1a_F_contig14921.2864.1 vs. uniprot
Match: E6XBN5_CELAD (Uncharacterized protein n=12 Tax=Cellulophaga TaxID=104264 RepID=E6XBN5_CELAD) HSP 1 Score: 223 bits (568), Expect = 3.690e-70 Identity = 114/173 (65.90%), Postives = 133/173 (76.88%), Query Frame = 1
Query: 1 MRTTLIILSTSLLILSLGCKEQPKTMETSEDMVKVQEVQKRL--VPTSWVTKRVQRAKLKLEQTDAGKVVWNAMEAHGGLKKWFNNGALSFRFNYQPLDGSTQRDSYQTIDTWSNKARHTSAADSTAYFGWDGKTAWVHAKDSTAFAYDTKFWALTPIYFLGQPFILDGEGVN 513
M+ L I +LL+L CKEQPK ET V +EVQ+ +P +WV RV +AK +L TDAGK+VW+AMEAHGGL W+NNG L+FRF+YQPLDGST+R+SYQTIDTW+NKARHTS ADSTA FGWDGK AWV AKDSTAF YDT+FWALTP+Y PFILDGEGVN
Sbjct: 1 MKLGLNIALVALLLLVGSCKEQPKKTET----VTSKEVQEPAYHIPETWVANRVGKAKERLNATDAGKIVWSAMEAHGGLATWYNNGYLAFRFDYQPLDGSTRRNSYQTIDTWNNKARHTSYADSTAIFGWDGKEAWVKAKDSTAFEYDTRFWALTPLYLAAHPFILDGEGVN 169
BLAST of mRNA_E-siliculosus-1a_F_contig14921.2864.1 vs. uniprot
Match: UPI001EFE590E (hypothetical protein n=1 Tax=Arenibacter hampyeongensis TaxID=1028743 RepID=UPI001EFE590E) HSP 1 Score: 221 bits (563), Expect = 2.050e-69 Identity = 109/162 (67.28%), Postives = 125/162 (77.16%), Query Frame = 1
Query: 31 SLLILSLG-CKEQPKTMETSEDMVKVQEVQKRLVPTSWVTKRVQRAKLKLEQTDAGKVVWNAMEAHGGLKKWFNNGALSFRFNYQPLDGSTQRDSYQTIDTWSNKARHTSAADSTAYFGWDGKTAWVHAKDSTAFAYDTKFWALTPIYFLGQPFILDGEGVN 513
S+L+L+ G CKEQ K E V V+ V K +P SW+ KRV +A +L T AGKVVWNAMEAHGGL KW++NG LSFRFNYQPLDGS RD+YQTIDTWSNKARH SAADSTA FGWDG+ AWV AKDSTAF Y+ +FWALTP+Y QP +LDGEGVN
Sbjct: 10 SVLLLTFGACKEQQKKTEE----VMVESVSKYKIPESWIQKRVDKANKRLNATGAGKVVWNAMEAHGGLSKWYSNGYLSFRFNYQPLDGSVSRDTYQTIDTWSNKARHISAADSTAIFGWDGENAWVKAKDSTAFKYNMRFWALTPLYLAAQPLVLDGEGVN 167 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig14921.2864.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig14921.2864.1 >prot_E-siliculosus-1a_F_contig14921.2864.1 ID=prot_E-siliculosus-1a_F_contig14921.2864.1|Name=mRNA_E-siliculosus-1a_F_contig14921.2864.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=171bp MRTTLIILSTSLLILSLGCKEQPKTMETSEDMVKVQEVQKRLVPTSWVTKback to top mRNA from alignment at E-siliculosus-1a_F_contig14921:2..514- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig14921.2864.1 ID=mRNA_E-siliculosus-1a_F_contig14921.2864.1|Name=mRNA_E-siliculosus-1a_F_contig14921.2864.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=513bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig14921:2..514- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig14921:2..514- >mRNA_E-siliculosus-1a_F_contig14921.2864.1 ID=mRNA_E-siliculosus-1a_F_contig14921.2864.1|Name=mRNA_E-siliculosus-1a_F_contig14921.2864.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1026bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig14921:2..514- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |