mRNA_E-siliculosus-1a_F_contig149.2858.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig149.2858.1 vs. uniprot
Match: D8LHI3_ECTSI (ARL2_Bind_BART domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHI3_ECTSI) HSP 1 Score: 317 bits (811), Expect = 3.040e-109 Identity = 154/162 (95.06%), Postives = 157/162 (96.91%), Query Frame = 1
Query: 1 MCHNGTCFPPSQFLDLWVDSYKTFRDCCVQQTNRTISRKHHEPFLDTADEGQWTSPGEVEHKLEFTEVYNLFLRHFEDKISGFIEEEAGGTVERFQQECQEALQTLEEFSPRRFFIEILLATTDYDRFYFLMVGEAKKLRREKEHARRGNGDSPSGSSSSHK 486
MCHNGT FPP QFLDLWVDSYK FRDCCVQ TNRTISRKHHEPFLDTADEGQWTSPGEVEHKLEFTEVYNLFLRHFE+KISGFIEEEAGGTVE+FQQEC+EALQTLEEFSPRRFFIEILLATTDYDRFYFLMVGEAKKLRREKEHARRGNGDS SGSSSSHK
Sbjct: 1 MCHNGTGFPPFQFLDLWVDSYKRFRDCCVQHTNRTISRKHHEPFLDTADEGQWTSPGEVEHKLEFTEVYNLFLRHFENKISGFIEEEAGGTVEQFQQECEEALQTLEEFSPRRFFIEILLATTDYDRFYFLMVGEAKKLRREKEHARRGNGDSLSGSSSSHK 162
BLAST of mRNA_E-siliculosus-1a_F_contig149.2858.1 vs. uniprot
Match: A0A6H5JKV0_9PHAE (ARL2_Bind_BART domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKV0_9PHAE) HSP 1 Score: 281 bits (720), Expect = 2.280e-95 Identity = 141/162 (87.04%), Postives = 145/162 (89.51%), Query Frame = 1
Query: 1 MCHNGTCFPPSQFLDLWVDSYKTFRDCCVQQTNRTISRKHHEPFLDTADEGQWTSPGEVEHKLEFTEVYNLFLRHFEDKISGFIEEEAGGTVERFQQECQEALQTLEEFSPRRFFIEILLATTDYDRFYFLMVGEAKKLRREKEHARRGNGDSPSGSSSSHK 486
M HNGT FP S LDLWVDSYK + DCCVQQTNRTI RKHHEPFL+TADEGQWTSP EVEHKLEFTEVYNLFL HFEDKISGFIEEEAGGTVE+FQQEC+EAL TLEEFSPRRFFIEILLATTDYDRFY LMVGEAKKLRR K HAR NGDS SGSSSSHK
Sbjct: 1 MFHNGTGFPRSHCLDLWVDSYKLYCDCCVQQTNRTIYRKHHEPFLNTADEGQWTSPAEVEHKLEFTEVYNLFLTHFEDKISGFIEEEAGGTVEQFQQECKEALLTLEEFSPRRFFIEILLATTDYDRFYVLMVGEAKKLRRAKAHARGSNGDSLSGSSSSHK 162
BLAST of mRNA_E-siliculosus-1a_F_contig149.2858.1 vs. uniprot
Match: A0A7S2SVE5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SVE5_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 5.730e-18 Identity = 47/103 (45.63%), Postives = 63/103 (61.17%), Query Frame = 1
Query: 106 ISRKHHEPFLDTADEGQWTSPGEVEHKLEFTEVYNLFLRHFEDKISGFIEEEAGGTVERFQQECQEALQTLEEFSPRRFFIEILLATTDYDRFYFLMVGEAKK 414
+SR+H + F T + EH+LE+ +VY +L FE KI FIE G +V+ FQ CQ+ L+ EFSP+RFF+E LLATT+Y F LM GEA+K
Sbjct: 12 VSRRHVDLFASAL-----TMSADDEHRLEYYDVYREYLDEFEKKIHTFIER-TGHSVDEFQTACQKVLEEEGEFSPKRFFVEALLATTEYPIFLSLMKGEARK 108
BLAST of mRNA_E-siliculosus-1a_F_contig149.2858.1 vs. uniprot
Match: F0XZQ0_AURAN (ARL2_Bind_BART domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZQ0_AURAN) HSP 1 Score: 87.0 bits (214), Expect = 7.450e-17 Identity = 44/109 (40.37%), Postives = 66/109 (60.55%), Query Frame = 1
Query: 103 TISRKHHEPFLDTADEGQWTSPGEVEHKLEFTEVYNLFLRHFEDKISGFIEEEAGGTVERFQQECQEALQTLEEFSPRRFFIEILLATTDYDRFYFLMVGEAKKLRREK 429
T + KH EPFLD +G+ + +H F + Y ++L HFE ++ I AG TV F +EAL+ +F P RFF+E LLATT+Y+ F LM+ EAK++R+++
Sbjct: 1170 TFAEKHIEPFLDALVKGESPTSDGGDHSHSFYDTYKVYLEHFERRVEQHIVA-AGATVGDFMAVAREALENASDFDPNRFFLEALLATTEYETFIVLMMNEAKRIRKQR 1277
BLAST of mRNA_E-siliculosus-1a_F_contig149.2858.1 vs. uniprot
Match: A0A835YP95_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YP95_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 9.130e-16 Identity = 41/72 (56.94%), Postives = 48/72 (66.67%), Query Frame = 1
Query: 184 KLEFTEVYNLFLRHFEDKISGFIEEEAGGTVERFQQECQEALQTLEEFSPRRFFIEILLATTDYDRFYFLMV 399
+LEFTE Y FL HFE KI IE GG FQ++C+ AL L + S RRFFIE LLATT+Y RF+ LMV
Sbjct: 1 RLEFTETYRKFLDHFEAKIQSHIEA-VGGDDAEFQRQCRRALMDLPQGSERRFFIEALLATTEYQRFFVLMV 71
BLAST of mRNA_E-siliculosus-1a_F_contig149.2858.1 vs. uniprot
Match: A0A5D6XLI6_9STRA (Cilia- and flagella-associated protein 36 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XLI6_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 6.130e-15 Identity = 42/110 (38.18%), Postives = 70/110 (63.64%), Query Frame = 1
Query: 106 ISRKHHEPFLDTADEGQWTSPGEVEHKLEFTEVYNLFLRHFEDKISGFIEEEAGGTVERFQQECQEAL--QTLEEFSPRRF--FIEILLATTDYDRFYFLMVGEAKKLRR 423
+R+H E FLD D G+VEHK E+ E+++ +LR FE+++S F+E E G T++ F +EC+ + + F ++ F+E LLA+ +Y+ F+ LM+ EA++LRR
Sbjct: 26 FAREHAETFLDALD----AKGGDVEHKHEYKEIHDKYLRLFEEELSDFVESE-GSTIDEFFRECRAVVNAKVTGYFDEHKYVWFVEHLLASMEYELFFSLMINEARRLRR 130
BLAST of mRNA_E-siliculosus-1a_F_contig149.2858.1 vs. uniprot
Match: K3X8Y9_GLOUD (Cilia- and flagella-associated protein 36 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X8Y9_GLOUD) HSP 1 Score: 76.3 bits (186), Expect = 9.080e-15 Identity = 41/114 (35.96%), Postives = 73/114 (64.04%), Query Frame = 1
Query: 106 ISRKHHEPFLDTADEGQWTSPGEVEHKLEFTEVYNLFLRHFEDKISGFIEEEAGGTVERFQQECQEALQ-----TLEEFSPRRFFIEILLATTDYDRFYFLMVGEAKKLRREKE 432
+R++ E F+D + G+VEHK E+ E+++ +LR FE+++S FIE E G T+E F +EC++ ++ + ++F+E L+A+ DY++FY LMV EA++L R ++
Sbjct: 25 FARENAEVFMDAVE----AKGGDVEHKHEYKELHDRYLRLFEEELSDFIESE-GATIEEFFRECRDIMEGNYTALFSDEHQYKWFVEHLVASMDYNQFYALMVNEARRLNRSRK 133
BLAST of mRNA_E-siliculosus-1a_F_contig149.2858.1 vs. uniprot
Match: A0A3F2RM49_9STRA (Cilia- and flagella-associated protein 36 n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RM49_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 2.590e-13 Identity = 42/110 (38.18%), Postives = 65/110 (59.09%), Query Frame = 1
Query: 106 ISRKHHEPFLDTADEGQWTSPGEVEHKLEFTEVYNLFLRHFEDKISGFIEEEAGGTVERFQQECQEA----LQTLEEFSPRRFFIEILLATTDYDRFYFLMVGEAKKLRR 423
+R+H + F+D + G+VEHK E+ E+++ +L+ FE+++S F+E E G T+E F +EC+E L E +F+E LLA DY FY LMV EA+ + R
Sbjct: 25 FAREHADAFIDATE----AKGGDVEHKHEYKELHDQYLKLFEEELSEFVESE-GSTIEEFFKECREIHDGEYTALFEEHTYAWFVEHLLACMDYKHFYGLMVNEARHMSR 129
BLAST of mRNA_E-siliculosus-1a_F_contig149.2858.1 vs. uniprot
Match: H3HEE7_PHYRM (Cilia- and flagella-associated protein 36 n=6 Tax=Phytophthora TaxID=4783 RepID=H3HEE7_PHYRM) HSP 1 Score: 70.9 bits (172), Expect = 1.040e-12 Identity = 41/112 (36.61%), Postives = 66/112 (58.93%), Query Frame = 1
Query: 106 ISRKHHEPFLDTADEGQWTSPGEVEHKLEFTEVYNLFLRHFEDKISGFIEEEAGGTVERFQQECQEA----LQTLEEFSPRRFFIEILLATTDYDRFYFLMVGEAKKLRREK 429
+R H + F+D + G+VEHK E+ E+++ +L+ FE+++S F+E E G T+E F +EC+E L + +F++ LLA DY FY LMV EA++L + K
Sbjct: 25 FARDHADVFIDATE----AKGGDVEHKHEYKELHDQYLKLFEEELSEFVESE-GATIEEFFKECREIHDGQYTALFDEHTYAWFVDHLLACMDYKHFYGLMVNEARRLHQRK 131
BLAST of mRNA_E-siliculosus-1a_F_contig149.2858.1 vs. uniprot
Match: A0A1V9ZS38_9STRA (Cilia- and flagella-associated protein 36 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZS38_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 3.070e-12 Identity = 38/109 (34.86%), Postives = 66/109 (60.55%), Query Frame = 1
Query: 106 ISRKHHEPFLDTADEGQWTSPGEVEHKLEFTEVYNLFLRHFEDKISGFIEEEAGGTVERFQQECQEALQTLEEFSPRRFFIEILLATTDYDRFYFLMVGEAKKLRREKE 432
+ +H F D A +VEHK E+ E++N +L+ FED++SGF+E+E GGTV F C++ ++ + + ++F++ L A+ +Y FY LMV EA++ R ++
Sbjct: 142 FAEEHAPAFFDAA------RSDDVEHKHEYKELHNAYLKLFEDRLSGFLEDE-GGTVSDFYDACKDVMEQKGDLAEYKWFLDRLHASMEYKLFYGLMVNEARQQLRSRK 243 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig149.2858.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig149.2858.1 >prot_E-siliculosus-1a_F_contig149.2858.1 ID=prot_E-siliculosus-1a_F_contig149.2858.1|Name=mRNA_E-siliculosus-1a_F_contig149.2858.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=163bp MCHNGTCFPPSQFLDLWVDSYKTFRDCCVQQTNRTISRKHHEPFLDTADEback to top mRNA from alignment at E-siliculosus-1a_F_contig149:75489..77443- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig149.2858.1 ID=mRNA_E-siliculosus-1a_F_contig149.2858.1|Name=mRNA_E-siliculosus-1a_F_contig149.2858.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1955bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig149:75489..77443- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig149:75489..77443- >mRNA_E-siliculosus-1a_F_contig149.2858.1 ID=mRNA_E-siliculosus-1a_F_contig149.2858.1|Name=mRNA_E-siliculosus-1a_F_contig149.2858.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=978bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig149:75489..77443- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |