mRNA_E-siliculosus-1a_F_contig149.2853.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig149.2853.1
Unique NamemRNA_E-siliculosus-1a_F_contig149.2853.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig149.2853.1 vs. uniprot
Match: A0A6H5J7J9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7J9_9PHAE)

HSP 1 Score: 626 bits (1615), Expect = 7.560e-214
Identity = 313/408 (76.72%), Postives = 349/408 (85.54%), Query Frame = 1
Query:    1 LDIDEGFWRATNESEIILACYNADACIGGQTGADSFCASGYKGPY-----CAVCQTDYSPSVAHTCTRCSSSRRQGLMAATVIAAIATVLAIVTISKFLLSTEVEERDVGCFHRRVLRAVPLQALKIIVVVWQILTQFADAANVTYPGVYQDFLSAIDVVNFDLGSVLAAGCVWSDMGFHDRLLVATIAPLVVVGLLAMTYGIAMRRNSAAGHHSAGDKTRRKHLTALLLLTFLIYSSVSSTVFQTFACETLDDGIEYLRADYRVHCTDAKHEAFQVYAGFMILVYPLGIPLLYAGLLFQRRDVLAHDDADKTVAQPISGLWEPYRPERFYYEVVECGRRVMLTGVVVFIFPNDAAQIAITMLAAFFFLWLFEVLSPYKSEYDMWLSRGGHMIVFLSMFHLLLLKVDV 1209
            LDI  G+WRAT+ES+ ILACYN DAC GGQTGADSFCASGY GP      C+VC+T ++PS+AHTCTRCSSSRRQGL+A  VIAA+  V AIVTI K+LLSTEV+E + GCFHRR+LRAVP+Q LKIIVVVWQILTQFAD AN+TYP  YQDFLSAIDVVNFDLGS LAAGC+W D+ FHDRLL+ T+ PLV VG L MTY +A+RRN  AG  +  D TR KHL+ALLLLTFLIYSSVSSTVFQTFACETLDDGIEYLR DY +HCTDAKH+AF+VYAG M++VYP+GIPLLYA LLFQRRDVL    ADKTVAQPI+GLWEPYRPERFYYEV+ECGRR+MLTGVV FIFPNDAAQIAITML AFFF  +FEV+SPY SE D WLSRGGH+IVFLSMF  LLLKVDV
Sbjct:  592 LDIHGGYWRATSESDKILACYNTDACTGGQTGADSFCASGYMGPCEEGEDCSVCETGFAPSLAHTCTRCSSSRRQGLLAVAVIAALVAVFAIVTIFKYLLSTEVDEGNAGCFHRRILRAVPVQTLKIIVVVWQILTQFADVANITYPQAYQDFLSAIDVVNFDLGSALAAGCLWPDIDFHDRLLLGTLGPLVAVGFLVMTYRVAVRRNGTAGGQTPADNTRHKHLSALLLLTFLIYSSVSSTVFQTFACETLDDGIEYLRVDYTIHCTDAKHKAFEVYAGIMVVVYPVGIPLLYAILLFQRRDVLGDARADKTVAQPIAGLWEPYRPERFYYEVIECGRRIMLTGVVAFIFPNDAAQIAITMLVAFFFSLVFEVMSPYTSESDTWLSRGGHVIVFLSMFDALLLKVDV 999          
BLAST of mRNA_E-siliculosus-1a_F_contig149.2853.1 vs. uniprot
Match: A0A6H5LAD4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAD4_9PHAE)

HSP 1 Score: 597 bits (1539), Expect = 1.720e-206
Identity = 304/403 (75.43%), Postives = 338/403 (83.87%), Query Frame = 1
Query:    1 LDIDEGFWRATNESEIILACYNADACIGGQTGADSFCASGYKGPYCAVCQTDYSPSVAHTCTRCSSSRRQGLMAATVIAAIATVLAIVTISKFLLSTEVEERDVGCFHRRVLRAVPLQALKIIVVVWQILTQFADAANVTYPGVYQDFLSAIDVVNFDLGSVLAAGCVWSDMGFHDRLLVATIAPLVVVGLLAMTYGIAMRRNSAAGHHSAGDKTRRKHLTALLLLTFLIYSSVSSTVFQTFACETLDDGIEYLRADYRVHCTDAKHEAFQVYAGFMILVYPLGIPLLYAGLLFQRRDVLAHDDADKTVAQPISGLWEPYRPERFYYEVVECGRRVMLTGVVVFIFPNDAAQIAITMLAAFFFLWLFEVLSPYKSEYDMWLSRGGHMIVFLSMFHLLLLKVDV 1209
            L IDEG+WRAT ES IILA YNA+AC GG+TGADSFCASGY+G YCAVC+TDYSPS+AH CT CSSSRRQGLM    IA I TVLA V I +++LSTE EE  + CF RRVL AVP+Q+LKIIVVVWQILTQFAD ANVTYPG+YQDFLSAIDV+NFD+GSVLA GC+W ++ FHDRLLV TI PLVV G LAMTYGI +RR SA+G     +K R KH TALL LTFL+YSSVSSTVFQTFACETLDD +EYLRADYR+HCTDAKH+AF+VYA  MI+VYP+GIPL YA LLFQ   +LA   ADKTVA  ISGLWEPYRPERFYYE VECGRRV LTGVVVFIFPNDAAQIAITML   +F  LFE+LSPY SE DMWLSRGGH+IVFLS+F L+LLKVDV
Sbjct:  271 LKIDEGYWRATTESVIILASYNANACAGGKTGADSFCASGYQGTYCAVCKTDYSPSLAHICTHCSSSRRQGLMCIAAIAVIVTVLAFVAIFQYMLSTEHEEGILWCFRRRVLGAVPVQSLKIIVVVWQILTQFADTANVTYPGLYQDFLSAIDVINFDIGSVLAVGCLWYEVDFHDRLLVNTIGPLVVAGFLAMTYGIVLRRYSASGGTGGVEKIRHKHQTALLFLTFLVYSSVSSTVFQTFACETLDDDVEYLRADYRIHCTDAKHKAFEVYAAIMIVVYPVGIPLFYAFLLFQHHHILADAGADKTVALSISGLWEPYRPERFYYEEVECGRRVNLTGVVVFIFPNDAAQIAITMLITSYFSLLFEILSPYGSESDMWLSRGGHVIVFLSIFDLVLLKVDV 673          
BLAST of mRNA_E-siliculosus-1a_F_contig149.2853.1 vs. uniprot
Match: D7G3S0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3S0_ECTSI)

HSP 1 Score: 614 bits (1584), Expect = 6.680e-203
Identity = 311/403 (77.17%), Postives = 345/403 (85.61%), Query Frame = 1
Query:    1 LDIDEGFWRATNESEIILACYNADACIGGQTGADSFCASGYKGPYCAVCQTDYSPSVAHTCTRCSSSRRQGLMAATVIAAIATVLAIVTISKFLLSTEVEERDVGCFHRRVLRAVPLQALKIIVVVWQILTQFADAANVTYPGVYQDFLSAIDVVNFDLGSVLAAGCVWSDMGFHDRLLVATIAPLVVVGLLAMTYGIAMRRNSAAGHHSAGDKTRRKHLTALLLLTFLIYSSVSSTVFQTFACETLDDGIEYLRADYRVHCTDAKHEAFQVYAGFMILVYPLGIPLLYAGLLFQRRDVLAHDDADKTVAQPISGLWEPYRPERFYYEVVECGRRVMLTGVVVFIFPNDAAQIAITMLAAFFFLWLFEVLSPYKSEYDMWLSRGGHMIVFLSMFHLLLLKVDV 1209
            L +DEG+WRAT ES IILACYNADAC GG+TGADSFCASGY+GPYCAVC+TDYS S+AHTC  CSSSRR+GL     IA I TVLA   + +++LSTE EE   GCF RRVL AVP+++LKIIVVVWQILTQFADAANVT+PG+YQDFLSAIDV+NFD+GSVLAAGC+WSDM FHDRLLV TI PLVV G LAMTYGI +RR+SA+      +K   KH TALL LTF++YSSVSSTVFQTFACETLDD +EYLRADYR+HCTDAKH+AF+VYA  MI+VYP+GIPLLYA LLFQRR VLA   ADKTVA  ISGLWEPYRPERFYYEVVECGRRVMLTGVVVFIFPNDAAQIAITML   FF  LFE+LSPY+SE DMWLSRGGH+IVFLSMF LLLLKVDV
Sbjct: 1182 LKLDEGYWRATTESVIILACYNADACAGGKTGADSFCASGYQGPYCAVCETDYSSSLAHTCKHCSSSRRRGLTVIAAIAVIVTVLAFAAVFQYMLSTEHEEGIFGCFRRRVLGAVPVESLKIIVVVWQILTQFADAANVTFPGLYQDFLSAIDVINFDIGSVLAAGCLWSDMDFHDRLLVNTIGPLVVAGFLAMTYGIVIRRHSASADTGGLEKIYHKHQTALLFLTFVVYSSVSSTVFQTFACETLDDDVEYLRADYRIHCTDAKHKAFKVYAAIMIVVYPVGIPLLYALLLFQRRHVLADAGADKTVALSISGLWEPYRPERFYYEVVECGRRVMLTGVVVFIFPNDAAQIAITMLITSFFSLLFEILSPYESESDMWLSRGGHVIVFLSMFDLLLLKVDV 1584          
BLAST of mRNA_E-siliculosus-1a_F_contig149.2853.1 vs. uniprot
Match: A0A6H5KX12_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX12_9PHAE)

HSP 1 Score: 597 bits (1540), Expect = 8.860e-203
Identity = 315/440 (71.59%), Postives = 355/440 (80.68%), Query Frame = 1
Query:    1 LDIDEGFWRATNESEIILACYNADACIGGQTGADSFCASGYKGPYCAVCQTDYSPSVAHTCTRCSSSRRQGLMAATVIAAIATVLAIVTISKFLLSTEV-EERDVGCFHRRVLRAVPLQALKIIVVVWQILTQ----------------------------------FADAANVTYPGVYQDFLSAIDVVNFDLGSVLAAGCVWSDMGFHDRLLVATIAPLVVVGLLAMTYGIAMRRNSA-AGHHSAGDKTRRKHLTALLLLTFLIYSSVSSTVFQTFACETLDDGIEYLRADYRVHCTDAKHEAFQVYAGFMILVYPLGIPLLYAGLLFQRRDVLAH-DDADKTVAQPISGLWEPYRPERFYYEVVECGRRVMLTGVVVFIFPNDAAQIAITMLAAFFFLWLFEVLSPYKSEYDMWLSRGGHMIVFLSMFHLLLLKVDV 1209
            L ID+G+WRATNES+ ILACYNADAC GGQTG++SFCASGY GPYCAVC+  +S S+AH CTRCS SRRQGL+AATVIAAIA VLAI  +S++LLSTE  EE +   FHRRV+RAVP QALKIIVVVWQILTQ                                  FADAANV+YPGVYQDFLSAIDV+NFDLGS+LAAGCVWS++ FH RLLV+T+ PL+VV  LAMTY IAM R+S+ A HHSA +K R KH  ALLLLTFL+YSSVSSTVFQTFACETLDDG+EYLRADYR++C DA HEAF+V+AGFMI VYP+GIPLLYA LLFQRRDVLA   D DK  A+ ISGLWEPYRPERFYYEVVECGRRVMLTGVVVFIFPNDAAQIAIT+L+AF F  +FE++SPYKS+ DMWLSRGGH+IVF SMF LLL KVDV
Sbjct:  547 LSIDKGYWRATNESDRILACYNADACSGGQTGSESFCASGYMGPYCAVCEPRHSSSLAHNCTRCSGSRRQGLLAATVIAAIAAVLAIAAVSRYLLSTEHDEEGNAEWFHRRVVRAVPFQALKIIVVVWQILTQHRPKQKALEIVSGTYSSQPNQTYIFRATSLIPAQFADAANVSYPGVYQDFLSAIDVINFDLGSLLAAGCVWSEIDFHHRLLVSTLGPLIVVAFLAMTYRIAMHRSSSRADHHSAAEKIRHKHQAALLLLTFLVYSSVSSTVFQTFACETLDDGVEYLRADYRINCKDAAHEAFEVFAGFMIFVYPVGIPLLYAVLLFQRRDVLADAGDDDKATAKSISGLWEPYRPERFYYEVVECGRRVMLTGVVVFIFPNDAAQIAITLLSAFCFFAIFEMVSPYKSDSDMWLSRGGHVIVFFSMFDLLLRKVDV 986          
BLAST of mRNA_E-siliculosus-1a_F_contig149.2853.1 vs. uniprot
Match: D7G1E0_ECTSI (EsV-1-12 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1E0_ECTSI)

HSP 1 Score: 585 bits (1507), Expect = 9.430e-195
Identity = 298/385 (77.40%), Postives = 330/385 (85.71%), Query Frame = 1
Query:   55 ACYNADACIGGQTGADSFCASGYKGPYCAVCQTDYSPSVAHTCTRCSSSRRQGLMAATVIAAIATVLAIVTISKFLLSTEVEERDVGCFHRRVLRAVPLQALKIIVVVWQILTQFADAANVTYPGVYQDFLSAIDVVNFDLGSVLAAGCVWSDMGFHDRLLVATIAPLVVVGLLAMTYGIAMRRNSAAGHHSAGDKTRRKHLTALLLLTFLIYSSVSSTVFQTFACETLDDGIEYLRADYRVHCTDAKHEAFQVYAGFMILVYPLGIPLLYAGLLFQRRDVLAHDDADKTVAQPISGLWEPYRPERFYYEVVECGRRVMLTGVVVFIFPNDAAQIAITMLAAFFFLWLFEVLSPYKSEYDMWLSRGGHMIVFLSMFHLLLLKVDV 1209
            AC+      GG+TGAD+FCASGY+GPYCAVC+TDYSPS+AHTCT CSSSRR+GL     IA I TV AIV I +++LSTE E+  +GCF R VL AVP+++LKIIVVVWQILTQFADAANVTYPGVYQDFLSAIDV+NFD+GSVLAAGC+WSDM FHDRLLV TI PLVVVG LAMTYGI +RR+SA+G     +K   KH TALLLLTFL+YSSVSSTVFQTFACE LDD +EYLRADYR+HCTDAKH+AF+VYA  MI+VYP+GIPLLYA LLFQRR VLA   ADKTVA  ISGLWEPYRPERFYYEVVECGRRVMLTGVVVFIFPNDAAQIAITML   FF  LFE+LSPY+SE DMWLSRGGH+IVFLSMF LLLLKVDV
Sbjct:  875 ACHFKGNSAGGKTGADNFCASGYQGPYCAVCKTDYSPSLAHTCTHCSSSRRRGLTVIAAIAVIVTVFAIVAIFQYMLSTEHEDGILGCFRRMVLGAVPVESLKIIVVVWQILTQFADAANVTYPGVYQDFLSAIDVINFDIGSVLAAGCLWSDMDFHDRLLVTTIGPLVVVGFLAMTYGIVLRRHSASGDTGGVEKIYHKHQTALLLLTFLVYSSVSSTVFQTFACEILDDDVEYLRADYRIHCTDAKHQAFKVYAAIMIVVYPVGIPLLYAALLFQRRHVLADAGADKTVALSISGLWEPYRPERFYYEVVECGRRVMLTGVVVFIFPNDAAQIAITMLLTLFFSSLFEILSPYESESDMWLSRGGHVIVFLSMFDLLLLKVDV 1259          
BLAST of mRNA_E-siliculosus-1a_F_contig149.2853.1 vs. uniprot
Match: A0A6H5L4F7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4F7_9PHAE)

HSP 1 Score: 510 bits (1314), Expect = 3.570e-170
Identity = 282/423 (66.67%), Postives = 318/423 (75.18%), Query Frame = 1
Query:    1 LDIDEGFWRATNESEII--------LACYNADACIGGQTGADSF------CASGYKGPY----CAVCQTDYSPSVAHTCTRCSSSRRQGLMAATVIAAIATVLAIVTISKFLLSTEVEER-DVGCFHRRVLRAVPLQALKIIVVVWQILTQFADAANVTYPGVYQDFLSAIDVVNFDLGSVLAAGCVWSDMGFHDRLLVATIAPLVVVGLLAMTYGIAMRRN-SAAGHHSAGDKTRRKHLTALLLLTFLIYSSVSSTVFQTFACETLDDGIEYLRADYRVHCTDAKHEAFQVYAGFMILVYPLGIPLLYAGLLFQRRDVLAHDDADKTVAQPISGLWEPYRPERFYYEVVECGRRVMLTGVVVFIFPNDAAQIAITMLAAFFFLWLFEVLSPYKSEYDMWLSRGGHMIVFLSMFHLLLLKVDV 1209
            L +D GFWRAT    +         L C      IG      SF      C S    P     CAVC+TDYSPS+AHTCTRCSSSRRQGL+AAT IAA+  V A+ T  KFLLSTEVEE  ++G F RRVLRAVP+QALKI+VVVWQILTQFAD ANVTYP VYQDFL AID+VNFDLGSVL AGC+WSD+  H RLLV+ I PL+VVG L MT  +A+RRN SA+G  +A +K R KH TALLL+TFL+YSSVSS VF TFACETLDD IEYLRAD R+H TDAKH+AF+VYAG M+ VYP+ IPLLYA LLFQ RDVL    ADKT+AQPI+GLWE Y PERFYYE   CGRR++LTG VVFIFPN A+QIAITML AFFF  +F+VLSPY S  D WLSRGGH+IVFLSMF  LLLKVDV
Sbjct:  462 LKVDGGFWRATQYGCLYRGANGLGKLLCLRIHGTIGHTLATVSFLPSCSLCRSVVFVPVPLTDCAVCETDYSPSLAHTCTRCSSSRRQGLVAATAIAALVAVFAVATFFKFLLSTEVEEGGNIGRFRRRVLRAVPVQALKIVVVVWQILTQFADVANVTYPSVYQDFLGAIDLVNFDLGSVLVAGCLWSDIDVHGRLLVSNIGPLIVVGFLTMTDRVAVRRNRSASGASAALEKIRHKHQTALLLVTFLLYSSVSSMVFSTFACETLDDDIEYLRADDRIHYTDAKHKAFEVYAGIMVFVYPVDIPLLYAALLFQHRDVLTRVGADKTLAQPIAGLWEAYSPERFYYE---CGRRILLTGGVVFIFPNTASQIAITMLIAFFFFAVFDVLSPYTSASDTWLSRGGHVIVFLSMFDFLLLKVDV 881          
BLAST of mRNA_E-siliculosus-1a_F_contig149.2853.1 vs. uniprot
Match: A0A6H5JWT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWT9_9PHAE)

HSP 1 Score: 515 bits (1326), Expect = 1.310e-169
Identity = 259/407 (63.64%), Postives = 321/407 (78.87%), Query Frame = 1
Query:    1 LDIDEGFWRATNESEIILACYNADACIGGQTGADSFCASGYKGPYCAVCQTDYSPSVAHTCTRCSSSRRQGLMAATVIAAIATVLAIVTISKFLLSTEVEERDVGCFHRRVLRAVPLQALKIIVVVWQILTQFADAANVTYPGVYQDFLSAIDVVNFDLGSVLAAGCVWSDMG--FHDRLLVATIAPLVVVGLLAMTYGIAMRRNSAA--GHHSAGDKTRRKHLTALLLLTFLIYSSVSSTVFQTFACETLDDGIEYLRADYRVHCTDAKHEAFQVYAGFMILVYPLGIPLLYAGLLFQRRDVLAHDDADKTVAQPISGLWEPYRPERFYYEVVECGRRVMLTGVVVFIFPNDAAQIAITMLAAFFFLWLFEVLSPYKSEYDMWLSRGGHMIVFLSMFHLLLLKVDV 1209
            L +  G+WRA+N S IILACYN +AC+GGQTG D+ C +GY+GPYCAVC++ Y+ S+AHTCT+CSSSRR G + A  IA +            L+S EV E+   C HRR+   +PLQ+ KII+VVWQILTQFA AAN+++P VYQDF++A+DVVNFDLGS++A+GC W+D+   FHDRLLV+T+ PL+VVG LA TY +A RRNS+A  G  +  +  R KHL+A LL+TFL+YSSVS+TVFQ FAC+ LDDG  YLRADYR+ CT AKHEA QVYA FMI +YP+GIPLLYA LL  RRDVL    ADK  AQ  + LWEPYRPERFYYEV+ECGRRV+LTGVVVFI+PN AAQ+A+T+L AFFFL ++E+L+PY+S+ DMWLSRGGH+IVFLSMF +LLLKVDV
Sbjct:  695 LSMSRGYWRASNSSLIILACYNPEACLGGQTGVDNSCDNGYQGPYCAVCESGYASSLAHTCTQCSSSRRNGFVVAAAIAVVXXXXXXXXXCAHLISGEVSEQS--CLHRRLSAMLPLQSFKIIIVVWQILTQFASAANISFPDVYQDFINALDVVNFDLGSLVASGC-WADINVDFHDRLLVSTLGPLLVVGGLASTYAVAQRRNSSASGGSQAGVEAIRHKHLSAFLLVTFLVYSSVSATVFQMFACDKLDDGHTYLRADYRILCTSAKHEALQVYAAFMIALYPVGIPLLYAYLLHHRRDVLMDPTADKASAQSTADLWEPYRPERFYYEVIECGRRVLLTGVVVFIYPNTAAQVAVTILIAFFFLMVYEMLAPYRSDSDMWLSRGGHVIVFLSMFDVLLLKVDV 1098          
BLAST of mRNA_E-siliculosus-1a_F_contig149.2853.1 vs. uniprot
Match: D7FM10_ECTSI (Probable extracellular nuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM10_ECTSI)

HSP 1 Score: 508 bits (1307), Expect = 2.730e-168
Identity = 256/374 (68.45%), Postives = 310/374 (82.89%), Query Frame = 1
Query:   94 GADSFCASGYKGPY--CAVCQTDYSPSVAHTCTRCSSSRRQGLMAATVIAAIATVLAIVTISKFLLSTEVEERDVGCFHRRVLRAVPLQALKIIVVVWQILTQFADAANVTYPGVYQDFLSAIDVVNFDLGSVLAAGCVWSDMGFHDRLLVATIAPLVVVGLLAMTYGIAMRRNSAAGHHSAGDKTRRKHLTALLLLTFLIYSSVSSTVFQTFACETLDDGIEYLRADYRVHCTDAKHEAFQVYAGFMILVYPLGIPLLYAGLLFQRRDVLAHDDADKTVAQPISGLWEPYRPERFYYEVVECGRRVMLTGVVVFIFPNDAAQIAITMLAAFFFLWLFEVLSPYKSEYDMWLSRGGHMIVFLSMFHLLLLKVDV 1209
            G++ F +S +KG    CAVC   YSPS+AHTCTRCS SRRQGLM ATV AA+  V A V   ++LLSTE EER++GCFHR+  +A+PLQ+ KII+VVWQILTQFA AANVTYP VYQDFLSAIDV+N DLGS+++AGC+WS + FHDRLLV+TIAPL+ +G+LA TY +A+RRN+ AGH +  +  R KH+T LL +TFL+YSSVSS VFQTFAC++LDDG  YLRADYR+ CT +KH A QVYAG M++VYP+GIPLLYA LLFQ RD+LA+  ADK  AQPI+ LWE Y+PERFYYEV+ECGRR+MLTGVVVFI+PNDAAQIAIT+L A FF  +F++LSPY SE+DMWLSRGG ++VFLSMF LLLLKVDV
Sbjct:  608 GSEQFTSSLFKGNSADCAVCGDGYSPSLAHTCTRCSRSRRQGLMVATVFAALIAVCATVATFRYLLSTEFEERNIGCFHRKTFQAIPLQSFKIIIVVWQILTQFAAAANVTYPRVYQDFLSAIDVINVDLGSMISAGCLWSGIDFHDRLLVSTIAPLLAIGMLASTYLVALRRNATAGH-AIIEIIRHKHVTVLLFVTFLVYSSVSSMVFQTFACDSLDDGNNYLRADYRILCTTSKHLALQVYAGVMVVVYPVGIPLLYAILLFQHRDILANASADKAGAQPIASLWEAYKPERFYYEVIECGRRIMLTGVVVFIYPNDAAQIAITILIAVFFFAVFDILSPYTSEFDMWLSRGGQVVVFLSMFDLLLLKVDV 980          
BLAST of mRNA_E-siliculosus-1a_F_contig149.2853.1 vs. uniprot
Match: D7G2X5_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X5_ECTSI)

HSP 1 Score: 415 bits (1067), Expect = 8.430e-130
Identity = 220/409 (53.79%), Postives = 292/409 (71.39%), Query Frame = 1
Query:    1 LDIDEGFWRATNESEIILACYNADACIGGQTGADSFCASGYKGPYCAVCQTDYSPSVAHTCTRCSSSRRQGLMAATVIAAIATVLAIVTISKFLLSTEVEERDVGCFHRRVLRAVPLQALKIIVVVWQILTQFADAANVTYPGVYQDFLSAIDVVNFDLGSVLAAGCVWSDMGFHDRLLVATIAPLVVVGLLAMTYGIAMRRNSAAGHHSAGDKTR---RKHLTALLLLTFLIYSSVSSTVFQTFACETLDDGIEYLRADYRVHCTDAKHEAFQVYAGFMILVYPLGIPLLYAGLLFQRRDVLAHDDADKTVAQPI---SGLWEPYRPERFYYEVVECGRRVMLTGVVVFIFPNDAAQIAITMLAAFFFLWLFEVLSPYKSEYDMWLSRGGHMIVFLSMFHLLLLKVDV 1209
            L ID G+WRAT+ S+ IL CYNADAC+GG TG   +C   Y+GPYC++C   Y+ ++ ++C++C S R  G++ A  +A +A  +A+V I  +++S E  ER +    R +   VPLQ++KI++V WQILTQFA AANV YPGVYQ FL  + V  FDLG +++AGCV  DMGFH RLL ATI P+  V LLA TY  A R N       A +K R    KH+   LLLTFL+YSSVSST+F+TFAC+ L+DG  YLR DYR+ C  +KH+ FQVYAGFMIL+YPLGIP+LY+ LLF+ R+VL  D AD+  +  +   S LW+PY+P  FYYEV+ECGRR++LTG+VVFI+PN AAQ+AIT++ AFFF  L E +SPY S ++ W++R GH++V +SM+  LLLKVDV
Sbjct:  971 LSIDPGYWRATSSSKEILPCYNADACLGGVTGTAGYCLESYEGPYCSICSDGYASNLGYSCSKCFS-RSGGIVFAVGMAVLALFVAVVVIM-YIMSGEAGERRMYVLER-LGWYVPLQSVKIVIVSWQILTQFASAANVVYPGVYQQFLDGLKVFGFDLGWLMSAGCVL-DMGFHGRLLAATIGPIFAVLLLAGTYAAATRIN-----REANEKLRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELEDGKNYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPMLYSILLFKDREVLKKDKADRDDSARVKSTSELWQPYKPSVFYYEVIECGRRILLTGIVVFIYPNTAAQLAITLMMAFFFALLSEAISPYSSRWETWVNRMGHVVVAVSMYVALLLKVDV 1370          
BLAST of mRNA_E-siliculosus-1a_F_contig149.2853.1 vs. uniprot
Match: D7G2Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Z8_ECTSI)

HSP 1 Score: 406 bits (1044), Expect = 2.770e-129
Identity = 218/408 (53.43%), Postives = 281/408 (68.87%), Query Frame = 1
Query:    1 LDIDEGFWRATNESEIILACYNADACIGGQTGADSFCASGYKGPYCAVCQTDYSPSVAHTCTRCSSSRRQGLMAATVIAAIATVLAIVTISKFLLSTEVEERDVGCFHRRVLRAVPLQALKIIVVVWQILTQFADAANVTYPGVYQDFLSAIDVVNFDLGSVLAAGCVWSDMGFHDRLLVATIAPLVVVGLLAMTYGIAMRRNSAAGHHSAGDKTR--RKHLTALLLLTFLIYSSVSSTVFQTFACETLDDGIEYLRADYRVHCTDAKHEAFQVYAGFMILVYPLGIPLLYAGLLFQRRDVLAHDDADKTVAQ---PISGLWEPYRPERFYYEVVECGRRVMLTGVVVFIFPNDAAQIAITMLAAFFFLWLFEVLSPYKSEYDMWLSRGGHMIVFLSMFHLLLLKVDV 1209
            L I+ G+WRAT  SE +L CYNADAC+GG TG++S+C  GY+GPYCAVC   Y+  +   C++CS   R G +A  V  ++A +L  V +  + +S E E R  G   R   R VPLQ++KI++V WQILTQF   AN+ +P VYQ FL A+++ NFDLG VL+AGCV+ D+ FHDRLLV+TIAP+V +  LA  Y  A R +    H S+ D  R   KH++ +LLLTFL+Y+SVS+ +FQTFACE LDD   YLRADYR+ C   KH AFQVYAGFMI++Y +GIP LY G LF+  DVL  D+AD+       P + LW+PYRP  FYYEV+EC RRV+L GVVVFI+PN AAQIA+ +L A  F  + E L+PY S +D WL R GH +V +SM+  LLLKVDV
Sbjct:  521 LVIEPGYWRATPSSENVLECYNADACLGGVTGSESYCLEGYEGPYCAVCSGGYTARLGMACSKCSD--RAGSIALGVSVSVAGLLFTVALVSYAVSGESEGRARGVVERTG-RFVPLQSVKIVIVAWQILTQFTSVANIRFPHVYQRFLDALELFNFDLGWVLSAGCVF-DVDFHDRLLVSTIAPIVGLLFLAAVYAAAARNS----HRSSEDLQRVWHKHVSLVLLLTFLVYASVSAVLFQTFACEELDDRKNYLRADYRIECDSPKHSAFQVYAGFMIVLYTVGIPALYGGFLFRDSDVLRRDEADREQLARIAPTADLWKPYRPSVFYYEVIECARRVLLAGVVVFIYPNTAAQIAVALLIAVVFAMISEALAPYASRWDTWLCRMGHAVVAVSMYVALLLKVDV 920          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig149.2853.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J7J9_9PHAE7.560e-21476.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5LAD4_9PHAE1.720e-20675.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G3S0_ECTSI6.680e-20377.17Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KX12_9PHAE8.860e-20371.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1E0_ECTSI9.430e-19577.40EsV-1-12 n=1 Tax=Ectocarpus siliculosus TaxID=2880... [more]
A0A6H5L4F7_9PHAE3.570e-17066.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JWT9_9PHAE1.310e-16963.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FM10_ECTSI2.730e-16868.45Probable extracellular nuclease n=1 Tax=Ectocarpus... [more]
D7G2X5_ECTSI8.430e-13053.79Adhesin-like protein n=1 Tax=Ectocarpus siliculosu... [more]
D7G2Z8_ECTSI2.770e-12953.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig149contigE-siliculosus-1a_F_contig149:39445..41091 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start0
Stop0
Cds size1209
Model size1211
Exons3
Ec32 orthologEc-14_005160.1
Ec32 ortholog descriptionHypothetical protein
Hectar predicted targeting categoryother localisation
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
EggNOG OGs2BFIX@1,2S176@2759
Seed eggNOG ortholog2880.D7G2X5
Seed ortholog evalue1.1e-114
Seed ortholog score420.2
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig149.2853.1prot_E-siliculosus-1a_F_contig149.2853.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig149 39445..41089 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928002.0546248-CDS-E-siliculosus-1a_F_contig149:39444..395771622928002.0546248-CDS-E-siliculosus-1a_F_contig149:39444..39577Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig149 39445..39577 +
1696318767.8294814-CDS-E-siliculosus-1a_F_contig149:39444..395771696318767.8294814-CDS-E-siliculosus-1a_F_contig149:39444..39577Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig149 39445..39577 +
1622928002.0991406-CDS-E-siliculosus-1a_F_contig149:39736..399991622928002.0991406-CDS-E-siliculosus-1a_F_contig149:39736..39999Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig149 39737..39999 +
1696318767.839789-CDS-E-siliculosus-1a_F_contig149:39736..399991696318767.839789-CDS-E-siliculosus-1a_F_contig149:39736..39999Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig149 39737..39999 +
1622928002.111588-CDS-E-siliculosus-1a_F_contig149:40276..410891622928002.111588-CDS-E-siliculosus-1a_F_contig149:40276..41089Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig149 40277..41089 +
1696318767.8487043-CDS-E-siliculosus-1a_F_contig149:40276..410891696318767.8487043-CDS-E-siliculosus-1a_F_contig149:40276..41089Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig149 40277..41089 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig149.2853.1

>prot_E-siliculosus-1a_F_contig149.2853.1 ID=prot_E-siliculosus-1a_F_contig149.2853.1|Name=mRNA_E-siliculosus-1a_F_contig149.2853.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=403bp
LDIDEGFWRATNESEIILACYNADACIGGQTGADSFCASGYKGPYCAVCQ
TDYSPSVAHTCTRCSSSRRQGLMAATVIAAIATVLAIVTISKFLLSTEVE
ERDVGCFHRRVLRAVPLQALKIIVVVWQILTQFADAANVTYPGVYQDFLS
AIDVVNFDLGSVLAAGCVWSDMGFHDRLLVATIAPLVVVGLLAMTYGIAM
RRNSAAGHHSAGDKTRRKHLTALLLLTFLIYSSVSSTVFQTFACETLDDG
IEYLRADYRVHCTDAKHEAFQVYAGFMILVYPLGIPLLYAGLLFQRRDVL
AHDDADKTVAQPISGLWEPYRPERFYYEVVECGRRVMLTGVVVFIFPNDA
AQIAITMLAAFFFLWLFEVLSPYKSEYDMWLSRGGHMIVFLSMFHLLLLK
VDV
back to top

mRNA from alignment at E-siliculosus-1a_F_contig149:39445..41091+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig149.2853.1 ID=mRNA_E-siliculosus-1a_F_contig149.2853.1|Name=mRNA_E-siliculosus-1a_F_contig149.2853.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1647bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig149:39445..41091+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CTCGACATTGATGAAGGCTTTTGGCGTGCAACAAACGAGAGTGAAATCAT CCTGGCGTGCTACAACGCGGATGCTTGCATCGGGGGACAAACGGGGGCGG ACAGCTTTTGTGCCTCAGGATACAAGGGACCATGTGAGGGGGGGACGAGG ACTAAAGCACTTGCCTCTGTTGTCTTGTTTGATAGGCATAAGAACATATT TGCCCGCTTCTGTACATAGACTACATGTCTTTCCCAGCCCCATACGCCCC TTGTTCTCACGTGCACGTGTGCGCGTGTCCATCTCTTGACAGATTGCGCT GTGTGCCAAACCGACTATTCTCCGTCAGTCGCTCATACCTGTACGCGGTG CTCAAGCTCGAGACGCCAGGGACTGATGGCCGCCACCGTCATCGCCGCTA TTGCTACAGTCCTTGCAATTGTGACAATTTCCAAGTTCTTGTTGTCGACG GAGGTTGAAGAGAGGGACGTCGGGTGCTTCCATCGGAGGGTACTTCGAGC CGTCCCCCTCCAAGCGTTGAAGATCATCGTCGTCGTGTGGCAGATATTGA CTCAGGTTTGCGCTCGCCGGGCTATTCGTGTTGGAACACCAAGATGCTTG CAATAATAAAGTAGATAGAGGCGATGATTTGAGATCCATGCGAAAGCAAG TCAGACTACTGCTGACACCGTGTGTATGTACGGGAAGGGGACAGAAATTT GGCGTACATATTGTGGAAAGTTCGCGGATGGCGATGGAGACAGGAACAGC ACCATAGCACAAGGCCATGGAAATTGAGTCGGGGGCTTGACGCCACGTCC AAACCCGACCTTTTTGTGTGATCCCCGCCCAGTTTGCAGACGCGGCCAAT GTCACCTACCCTGGCGTGTACCAAGACTTTCTGAGCGCCATCGACGTCGT CAATTTCGACCTCGGTTCGGTTCTCGCGGCCGGGTGCGTGTGGTCCGACA TGGGCTTCCACGACCGGCTTCTTGTCGCCACCATAGCGCCGTTGGTTGTT GTTGGGTTGCTGGCGATGACTTACGGGATCGCGATGCGTAGGAACAGCGC AGCCGGCCATCATTCTGCAGGAGACAAGACCCGCCGCAAACATCTGACGG CTCTCCTACTCTTGACGTTCCTGATCTATTCGTCAGTATCGTCGACGGTG TTCCAAACGTTTGCTTGCGAGACACTCGATGACGGGATCGAGTACCTCCG GGCGGACTACCGTGTTCACTGCACGGATGCCAAACACGAGGCCTTTCAGG TGTACGCAGGGTTCATGATCTTGGTTTACCCGCTGGGCATCCCCCTGTTG TACGCCGGCCTTCTGTTTCAACGTCGCGACGTATTGGCCCATGATGATGC GGACAAGACGGTAGCCCAGCCGATTTCCGGCCTGTGGGAGCCGTACAGAC CCGAGCGGTTCTACTACGAGGTCGTCGAGTGCGGGCGCCGTGTCATGCTG ACCGGCGTAGTCGTCTTCATCTTTCCGAACGACGCGGCCCAAATCGCGAT AACGATGCTGGCTGCCTTCTTTTTCTTGTGGCTCTTCGAGGTGCTGTCGC CGTACAAATCCGAGTACGACATGTGGCTTTCGCGCGGGGGGCACATGATA GTGTTCCTCAGCATGTTCCATTTGTTGCTGCTGAAGGTGGACGTGTC
back to top

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig149:39445..41091+

>mRNA_E-siliculosus-1a_F_contig149.2853.1 ID=mRNA_E-siliculosus-1a_F_contig149.2853.1|Name=mRNA_E-siliculosus-1a_F_contig149.2853.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2418bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig149:39445..41091+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CTCGACATTGATGAAGGCTTTTGGCGTGCAACAAACGAGAGTGAAATCAT
CCTGGCGTGCTACAACGCGGATGCTTGCATCGGGGGACAAACGGGGGCGG
ACAGCTTTTGTGCCTCAGGATACAAGGGACCATCTCGACATTGATGAAGG
CTTTTGGCGTGCAACAAACGAGAGTGAAATCATCCTGGCGTGCTACAACG
CGGATGCTTGCATCGGGGGACAAACGGGGGCGGACAGCTTTTGTGCCTCA
GGATACAAGGGACCATATTGCGCTGTGTGCCAAACCGACTATTCTCCGTC
AGTCGCTCATACCTGTACGCGGTGCTCAAGCTCGAGACGCCAGGGACTGA
TGGCCGCCACCGTCATCGCCGCTATTGCTACAGTCCTTGCAATTGTGACA
ATTTCCAAGTTCTTGTTGTCGACGGAGGTTGAAGAGAGGGACGTCGGGTG
CTTCCATCGGAGGGTACTTCGAGCCGTCCCCCTCCAAGCGTTGAAGATCA
TCGTCGTCGTGTGGCAGATATTGACTCAGATTGCGCTGTGTGCCAAACCG
ACTATTCTCCGTCAGTCGCTCATACCTGTACGCGGTGCTCAAGCTCGAGA
CGCCAGGGACTGATGGCCGCCACCGTCATCGCCGCTATTGCTACAGTCCT
TGCAATTGTGACAATTTCCAAGTTCTTGTTGTCGACGGAGGTTGAAGAGA
GGGACGTCGGGTGCTTCCATCGGAGGGTACTTCGAGCCGTCCCCCTCCAA
GCGTTGAAGATCATCGTCGTCGTGTGGCAGATATTGACTCAGTTTGCAGA
CGCGGCCAATGTCACCTACCCTGGCGTGTACCAAGACTTTCTGAGCGCCA
TCGACGTCGTCAATTTCGACCTCGGTTCGGTTCTCGCGGCCGGGTGCGTG
TGGTCCGACATGGGCTTCCACGACCGGCTTCTTGTCGCCACCATAGCGCC
GTTGGTTGTTGTTGGGTTGCTGGCGATGACTTACGGGATCGCGATGCGTA
GGAACAGCGCAGCCGGCCATCATTCTGCAGGAGACAAGACCCGCCGCAAA
CATCTGACGGCTCTCCTACTCTTGACGTTCCTGATCTATTCGTCAGTATC
GTCGACGGTGTTCCAAACGTTTGCTTGCGAGACACTCGATGACGGGATCG
AGTACCTCCGGGCGGACTACCGTGTTCACTGCACGGATGCCAAACACGAG
GCCTTTCAGGTGTACGCAGGGTTCATGATCTTGGTTTACCCGCTGGGCAT
CCCCCTGTTGTACGCCGGCCTTCTGTTTCAACGTCGCGACGTATTGGCCC
ATGATGATGCGGACAAGACGGTAGCCCAGCCGATTTCCGGCCTGTGGGAG
CCGTACAGACCCGAGCGGTTCTACTACGAGGTCGTCGAGTGCGGGCGCCG
TGTCATGCTGACCGGCGTAGTCGTCTTCATCTTTCCGAACGACGCGGCCC
AAATCGCGATAACGATGCTGGCTGCCTTCTTTTTCTTGTGGCTCTTCGAG
GTGCTGTCGCCGTACAAATCCGAGTACGACATGTGGCTTTCGCGCGGGGG
GCACATGATAGTGTTCCTCAGCATGTTCCATTTGTTGCTGCTGAAGGTGG
ACGTGTTTGCAGACGCGGCCAATGTCACCTACCCTGGCGTGTACCAAGAC
TTTCTGAGCGCCATCGACGTCGTCAATTTCGACCTCGGTTCGGTTCTCGC
GGCCGGGTGCGTGTGGTCCGACATGGGCTTCCACGACCGGCTTCTTGTCG
CCACCATAGCGCCGTTGGTTGTTGTTGGGTTGCTGGCGATGACTTACGGG
ATCGCGATGCGTAGGAACAGCGCAGCCGGCCATCATTCTGCAGGAGACAA
GACCCGCCGCAAACATCTGACGGCTCTCCTACTCTTGACGTTCCTGATCT
ATTCGTCAGTATCGTCGACGGTGTTCCAAACGTTTGCTTGCGAGACACTC
GATGACGGGATCGAGTACCTCCGGGCGGACTACCGTGTTCACTGCACGGA
TGCCAAACACGAGGCCTTTCAGGTGTACGCAGGGTTCATGATCTTGGTTT
ACCCGCTGGGCATCCCCCTGTTGTACGCCGGCCTTCTGTTTCAACGTCGC
GACGTATTGGCCCATGATGATGCGGACAAGACGGTAGCCCAGCCGATTTC
CGGCCTGTGGGAGCCGTACAGACCCGAGCGGTTCTACTACGAGGTCGTCG
AGTGCGGGCGCCGTGTCATGCTGACCGGCGTAGTCGTCTTCATCTTTCCG
AACGACGCGGCCCAAATCGCGATAACGATGCTGGCTGCCTTCTTTTTCTT
GTGGCTCTTCGAGGTGCTGTCGCCGTACAAATCCGAGTACGACATGTGGC
TTTCGCGCGGGGGGCACATGATAGTGTTCCTCAGCATGTTCCATTTGTTG
CTGCTGAAGGTGGACGTG
back to top