mRNA_E-siliculosus-1a_F_contig149.2851.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig149.2851.1 vs. uniprot
Match: D8LCD2_ECTSI (CBM_25 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCD2_ECTSI) HSP 1 Score: 692 bits (1787), Expect = 3.620e-250 Identity = 374/384 (97.40%), Postives = 376/384 (97.92%), Query Frame = 1
Query: 85 MKNSGATSVTAVVSALAVCSLSADAFFTAGRLPS-GGRVSSSARQSTCESSSYSWGRASSLRFSSSATRAAARNRGLTSVQSASTTTTTSEQAATHGSVTFLPENDELAAEETVEIIYTPPAGLFEGADSLLYCGGFNGWDGEEDGVTMPMMPVGDEGDFRISINVPNFARVLDFVVTDGVRYDTGPEGLFYHAMVTHVREADKAGNIITYRQEADGTLIKTGMIEKVDPQELERMMDEATKAQAAAAAPPPVADPMVDETMAEVEQGLRQEITVTIDEQDAVQKMRAEASVLGERLGLGNMQVNEARDAFDVHDNEQGLLAFEDVGKVLDKLGFQDELDSAQLAELIGTHVLEKRPDADTMTLTEFMYLFKALDDMDIGIDIC 1233
M NS A SVTAVVSALAVCSLSADAFFTAGRLPS GGRVSSSARQSTCESSS WGRASSLRFSSSAT+AAARNRGLTSVQSASTTTTTSEQAATHGSVTFLPENDELAAEETVEIIYTPP GLFEGADSLLYCGGFNGWDGEEDGVTMPMMP GDEG+FRISINVPNFARVLDFVVTDGVRYDTGPEGLFYHAMVTHVREADKAGNIITYRQEADGTLIKTGMIEKVDPQELERMMDEATKAQAAAAAPPPVADPMVDETMAEVEQGLRQEITVTIDEQDAVQKMRAEASVLGERLGLGNMQVNEARDAFDVHDNEQGLLAFEDVGKVLDKLGFQDELDSAQLAELIGTHVLEKRPDADTMTLTEFMYLFKALDDMDIGIDIC
Sbjct: 1 MPNSSAASVTAVVSALAVCSLSADAFFTAGRLPSSGGRVSSSARQSTCESSS--WGRASSLRFSSSATQAAARNRGLTSVQSASTTTTTSEQAATHGSVTFLPENDELAAEETVEIIYTPPTGLFEGADSLLYCGGFNGWDGEEDGVTMPMMPAGDEGNFRISINVPNFARVLDFVVTDGVRYDTGPEGLFYHAMVTHVREADKAGNIITYRQEADGTLIKTGMIEKVDPQELERMMDEATKAQAAAAAPPPVADPMVDETMAEVEQGLRQEITVTIDEQDAVQKMRAEASVLGERLGLGNMQVNEARDAFDVHDNEQGLLAFEDVGKVLDKLGFQDELDSAQLAELIGTHVLEKRPDADTMTLTEFMYLFKALDDMDIGIDIC 382
BLAST of mRNA_E-siliculosus-1a_F_contig149.2851.1 vs. uniprot
Match: A0A6H5JA90_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA90_9PHAE) HSP 1 Score: 407 bits (1047), Expect = 3.370e-140 Identity = 211/214 (98.60%), Postives = 214/214 (100.00%), Query Frame = 1
Query: 592 RVLDFVVTDGVRYDTGPEGLFYHAMVTHVREADKAGNIITYRQEADGTLIKTGMIEKVDPQELERMMDEATKAQAAAAAPPPVADPMVDETMAEVEQGLRQEITVTIDEQDAVQKMRAEASVLGERLGLGNMQVNEARDAFDVHDNEQGLLAFEDVGKVLDKLGFQDELDSAQLAELIGTHVLEKRPDADTMTLTEFMYLFKALDDMDIGIDIC 1233
+VLDFVVTDGVRYDTGPEGLFYHAMVTHVREADKAGNIITYRQEADGTLIKTG+IEKVDPQELERMMDEATKAQAAAAAPPPVADPMVDETMAEVE+GLRQEITVTIDEQDAVQKMRAEASVLGERLGLGNMQVNEARDAFDVHDNEQGLLAFEDVGKVLDKLGFQDELDSAQLAELIGTHVLEKRPDADTMTLTEFMYLFKALDDMDIGIDIC
Sbjct: 3 QVLDFVVTDGVRYDTGPEGLFYHAMVTHVREADKAGNIITYRQEADGTLIKTGIIEKVDPQELERMMDEATKAQAAAAAPPPVADPMVDETMAEVEKGLRQEITVTIDEQDAVQKMRAEASVLGERLGLGNMQVNEARDAFDVHDNEQGLLAFEDVGKVLDKLGFQDELDSAQLAELIGTHVLEKRPDADTMTLTEFMYLFKALDDMDIGIDIC 216
BLAST of mRNA_E-siliculosus-1a_F_contig149.2851.1 vs. uniprot
Match: A0A835YX15_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX15_9STRA) HSP 1 Score: 251 bits (642), Expect = 4.920e-78 Identity = 139/278 (50.00%), Postives = 182/278 (65.47%), Query Frame = 1
Query: 400 ELAAEETVEIIYTPPAGLFEGADSLLYCGGFNGWDGEEDGVTMPMMPVGDEGDFRISINVPNFARVLDFVVTDGVRYDTGPEGLFYHAMVTHVREADKAGNIITYRQEADGTLIKTGMIEKVDPQELERMMDEATKAQAAAAAPPPVADPMVDETMAEVEQGLRQEITVTIDEQDAVQKMRAEASVLGERLGLGNMQVNEARDAFDVHDNEQ-GLLAFEDVGKVLDKLGFQDELDSAQLAELIGTHVLEKRPDADTMTLTEFMYLFKALDDMDIGIDI 1230
EL+ E+T+ + YTPP F L YCGG+NGWDGEE V +P++ D G ++ SI +PNFA+ LDF VTDG+RYD GP+ FYH VTH+RE D AGNI YRQ+ DGTL GMIE DPQELERM+DE +D+ V + ++ E T++ +EQ AVQ MRAEAS+LGE+LGLGNMQV+EARDAFD D+E G L E +G VLD++G LD+ ++A L+ H RP+A T+ L+E+M+++ LD D GIDI
Sbjct: 22 ELSVEDTIMVHYTPPREFFREESGLFYCGGYNGWDGEETPVMVPLLRQRD-GRYKASITIPNFAKTLDFTVTDGIRYDMGPDDAFYHIRVTHIREEDDAGNIRLYRQDEDGTLTYEGMIETFDPQELERMIDEG-----------------IDK----VAENIKVE-TLSTEEQQAVQVMRAEASILGEKLGLGNMQVSEARDAFDFFDDETTGELQVEHLGLVLDRMGLT--LDADEIAGLLERHTYATRPEATTVRLSEYMHMWSELDQADTGIDI 274
BLAST of mRNA_E-siliculosus-1a_F_contig149.2851.1 vs. uniprot
Match: A0A7S2W5E1_9STRA (Hypothetical protein n=3 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W5E1_9STRA) HSP 1 Score: 117 bits (294), Expect = 2.510e-26 Identity = 88/292 (30.14%), Postives = 132/292 (45.21%), Query Frame = 1
Query: 370 GSVTFLPENDELAAEETVEIIYTPPAGLFEGADSLLYCGGFNGWDGEEDGVTMPMMPVGDEGDFRISINVPNFARVLDFVVTDGVRYDTGPEGLFYHAMVTHVREADKAGNIITYRQEADGTLIKTGMIEKVDPQELERMMDEATKAQAAAAAPPPVADPMVDETMAEVEQGLRQEITVTIDEQDAVQK----MRAEASVLGERLGLGNMQVNEARDAFD-VHDNEQGLLAFEDVGKVLDKLGFQDELDSAQLAELIGTHVLEKRPDADTMTLTEFMYLFKALDDMDIGIDI 1230
G V + +DEL+ + + + YTP +F L GFNGW GE + G S+ +PNFA+ + F++T+G R+DT EG +YHA V H E DK GN+ DGT+ + M + D QELERM+D E+ I V D ++K +R EA + L + NMQ +E R+AF+ V + + +G L LG E+ + EL+ H E A +L+E M++F LD + G++I
Sbjct: 61 GRVRWQSSSDELSVGDVLTVQYTPSPTIFPITSDLELWAGFNGWKGENKPLRAAFFK-DSSGRLEASVTIPNFAKTVQFIITNGYRFDTN-EGQYYHAHVFHTLETDKNGNVFRCHHAEDGTVNRLAMQNR-DAQELERMIDH------------------------ELSSVTNSVIQVDTSVTDVLEKKRLALREEALSTAQSLRMHNMQAHEVREAFEKVQHGDDAFTGRDSIGVFLGHLGM--EVPEPTIEELVARHCEEPNEGA---SLSEAMHIFHELDQENFGLNI 320
BLAST of mRNA_E-siliculosus-1a_F_contig149.2851.1 vs. uniprot
Match: A0A1X6PBW0_PORUM (CBM_25 domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PBW0_PORUM) HSP 1 Score: 117 bits (292), Expect = 7.000e-26 Identity = 99/300 (33.00%), Postives = 149/300 (49.67%), Query Frame = 1
Query: 370 GSVTFLPENDELAAEETVEIIYTPPAGLFEGADSLLYCGGFNGWDGEEDGVTMPMMPVGD--EGDFRISINVPNFARVLDFVVTD-----GVRYDTGPEGLFYHAMVTHVREADKAGNIITY-----RQEADGTLIKTGMIEKVDPQELERMMDEATKAQAAAAAPPPVADPMVDETMAEVEQGLRQEITVTIDEQDAVQKMRAEASVLGERLGLGNMQVNEARDAFDVHDNEQ-GLLAFEDVGKVLDKLGFQDELDSAQLAELIGTHVLEKRPDADTMTLTEFMYLFKALDDMDIGIDI 1230
G+ TF P+ D ++ +T+ + YTPP GLF D + Y GGFNGW E D T + P G +R+S+ VPNFARVLDF GVRYD LF+ +V +R G + +Y +EADGT ++G+ KVD D VD T G+ + E+ A+ + R E++++GE GLGN+Q++ ARDAF+ D + G+L+ E + L LGF E+ +L L+ V K + +++FM ++ L++ D GI+I
Sbjct: 76 GTFTFSPDGD-VSVGDTLSVTYTPPVGLFTEDDVVCYAGGFNGWSSETD-TTPLLFPAQSLFNGSYRVSVVVPNFARVLDFAFVQDAAAGGVRYDDNSGTLFHIPVVNQLRLTAN-GEVQSYVAGSEDEEADGT--RSGL--KVD------------------------GDRGVDLTGGGGVGGVGMGPVLDDGEEAALHRSRGESALVGEAAGLGNIQISAARDAFERLDPDMTGVLSIESSVRALVLLGF--EMTEGRLRTLLS-EVGAKVGAGGGLAMSDFMLVYADLENADEGIEI 341
BLAST of mRNA_E-siliculosus-1a_F_contig149.2851.1 vs. uniprot
Match: W7U5L9_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U5L9_9STRA) HSP 1 Score: 111 bits (278), Expect = 1.450e-23 Identity = 102/336 (30.36%), Postives = 164/336 (48.81%), Query Frame = 1
Query: 406 AAEETVEIIYTPPAGLFEGADS--------------LLYCGGFNGWDGEEDGVTMPMMPVGDEGDFRISINVPNFARVLDFVVTDG-VRYDTGPEGLFYHAMVTHVREADKAGNIITYRQEADGTLIKTGMIEKVDPQELERMMDEATKAQAAAAAPPPVADPMVDE------TMAEVEQG--------------------------------------LRQEITVTIDEQDAVQKMRAEASVLGERLGLGN-MQVNEARDAFDVHDNEQGLLAFEDVGKVLDKLGFQDELDSAQLAELIGTHVLEKRPDADT-MTLTEFMYLFKALDDMDIGIDI 1230
A +T+ I+Y P EGADS LLY FNGW+GEE + P+ P GD G +++VPN+A+VLD +V+DG + +DT G F+H + HV+E ++ G + + Q DG++ TG+ D +ELERM++E A+ ++A + D +E T+A+ E+ L + D + Q++RAEA+ +GE LG+ + M +NE R++FD + +L ++ K L ++GF D L++A+L +L + P A +TL FM +F LD ++GI I
Sbjct: 75 AVGDTLSIVYDPAG---EGADSPLTMLEEDEGASPCLLY--NFNGWNGEETPLRTPLFPQGD-GTLMATVHVPNYAKVLDCIVSDGQLAFDT-EAGQFFHLRIAHVQE-ERDGTVYNFFQGEDGSITLTGVQADNDARELERMIEEELSARETSSAEGQLFDEEPEERRFSSSTVADYEESHLSDLEGDSEEAGEGKSPLSEDADAGGEAARQLASSGSLGVHVAALEDVGNVPQQLRAEATAVGEALGISSSMIINELRESFDSV-TDADVLTIGELPKALARMGF-DGLEAAELEDLCMRVQGTEAPAAGRCLTLEHFMRIFHLLDTENVGIVI 400
BLAST of mRNA_E-siliculosus-1a_F_contig149.2851.1 vs. uniprot
Match: A0A7S1DE67_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DE67_HEMAN) HSP 1 Score: 84.7 bits (208), Expect = 2.570e-16 Identity = 40/97 (41.24%), Postives = 58/97 (59.79%), Query Frame = 1
Query: 415 ETVEIIYTPPAGLFEGADSLLYCGGFNGWDGEEDGVTMPMMPVGDEGDFRISINVPNFARVLDFVVTDGVRYDTGPEGLFYHAMVTHVREADKAGNI 705
+TV + Y PP LF + Y GG+NGWDGE D + +P+ P G R +I VPNFARV+DF +DG+R+DT G ++H + V+ + G +
Sbjct: 25 DTVTVTYAPPPSLFPAGSDIFYLGGWNGWDGETDPMAVPLAPCAG-GRHRCTITVPNFARVVDFCFSDGLRFDTNG-GAYFHMALDRVKVLGEDGAV 119
BLAST of mRNA_E-siliculosus-1a_F_contig149.2851.1 vs. uniprot
Match: M2W9F3_GALSU (Glycosyltransferase family 5 protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W9F3_GALSU) HSP 1 Score: 78.2 bits (191), Expect = 9.080e-13 Identity = 68/281 (24.20%), Postives = 123/281 (43.77%), Query Frame = 1
Query: 400 ELAAEETVEIIYTPPAGLFEGADSLLYCGGFNGWDGEEDGVTMPMMPVGDEGD-FRISINVPNFARVLDFVVTDGVRYDTGPEGLFYHAMVTH-VREADKAGNIITYRQEADGTLIKTGMIEKVDPQELERMMDEATKAQAAAAAPPPVADPMVDETMAEVEQGLRQEITVTIDEQDAVQKMRAEASVLGERLGLGNMQVNEARDAFDVHDNEQ-GLLAFEDVGKVLDKLGFQDELDSAQLAE-LIGTHVLEKRPDADTMTLTEFMYLFKALDDMDIGIDI 1230
E + + + I Y PP F L Y GG+N W G ++ + +P+ + D + + + +P + ++F TDGV YDT G FYH + V E + + I + + + ++DP ++ T DE+ A++K RAEA+ +GE +GL N+ + EAR F+ D G ++ E+ +++LGF E+ + E + + D + + +TEF+YL+ +L+ + G+ I
Sbjct: 16 ESQSNKYILIQYQPPVEYFRSGQDLFYTGGYNNWSGVDNPLILPLRQ--KKADLYEVLVPLPEGSVSVEFAFTDGVVYDTN-HGAFYHIPLEQFVTEEENNSHHIE-------NVSENTKLSELDPLKIPEGPTRYTN-----------------------------------DEEIALRKARAEATAVGESMGLSNVLMTEARTEFERFDTRMSGWISREEAKMCIERLGF--EIGDKEFHEWTLACKEYSRDEDMENIHITEFIYLYGSLELRNEGLQI 249
BLAST of mRNA_E-siliculosus-1a_F_contig149.2851.1 vs. uniprot
Match: A0A6T6NQE4_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A6T6NQE4_9RHOD) HSP 1 Score: 64.3 bits (155), Expect = 2.560e-8 Identity = 57/229 (24.89%), Postives = 101/229 (44.10%), Query Frame = 1
Query: 550 EGDFRISINVPNFARVLDFVVTDGVRYDTGPEGLFYHAMVTHVREADKAGNIITYRQEADGTLIKTGMIEKVDPQELERMMDEATKAQAAAAAPPPVADPMVDETMAEVEQGLRQEITVTIDEQDAVQKMRAEASVLGERLGLGNMQVNEARDAFDVHDNEQ-GLLAFEDVGKVLDKLGFQDELDSAQLAELIGTHVLEK-RPDADTMTLTEFMYLFKALDDMDIGIDI 1230
+G +RI + +PNFA+V+DF V+DG+RYDT +G F+H + + G I Y AD E+ E+ D + AA +T + + + + RA A ++ ER LG++ +++A A+D D G +A +++GF E D L++L+ K R + +T ++FM + L+ + ++I
Sbjct: 16 DGAYRIVVTIPNFAQVVDFAVSDGIRYDTN-DGNFFHIPIRFQQRLGDDGEIEVY-DSAD---------EEQSKVEIREFRDAHSTNVAA----------------------------ITPENEKLLHEARATADMISERFSLGSIHISQATAAYDRIDKAGVGKIAINAAILAFEEMGF--ETDKNTLSDLLNDFAEGKERTLLEELTASDFMVAYALLESDESALEI 203 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig149.2851.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig149.2851.1 >prot_E-siliculosus-1a_F_contig149.2851.1 ID=prot_E-siliculosus-1a_F_contig149.2851.1|Name=mRNA_E-siliculosus-1a_F_contig149.2851.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=412bp MKYEHGADHRPAASCQVTQLTVPSLLCRMKNSGATSVTAVVSALAVCSLSback to top mRNA from alignment at E-siliculosus-1a_F_contig149:21580..27359+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig149.2851.1 ID=mRNA_E-siliculosus-1a_F_contig149.2851.1|Name=mRNA_E-siliculosus-1a_F_contig149.2851.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=5780bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig149:21580..27359+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig149:21580..27359+ >mRNA_E-siliculosus-1a_F_contig149.2851.1 ID=mRNA_E-siliculosus-1a_F_contig149.2851.1|Name=mRNA_E-siliculosus-1a_F_contig149.2851.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2472bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig149:21580..27359+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |