mRNA_E-siliculosus-1a_F_contig1488.2837.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1488.2837.1 vs. uniprot
Match: D8LTN2_ECTSI (Palmitoyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTN2_ECTSI) HSP 1 Score: 560 bits (1442), Expect = 5.740e-201 Identity = 272/297 (91.58%), Postives = 279/297 (93.94%), Query Frame = 1
Query: 1 MNVGPLLKRKQQWEYWQGNANFFAGGRIMVGSHCRALAFSATILLFTAALFFTFISLPATTYGGWAFFSTVSVCLFVGCIVSLASTAMMDPGIIPRRTLALWNSLDPASPGIAERKFCVTCQLARPPRAKHCKWCNNCVMEFDHHCPFTGNCIGARNYRAFMAFISMVTISAFFACALSVLHIVAPRADNVGPVLLTSRARIPGSQFFPHLLALWTAVVTVLVGGLLCFHIFLVAKGQTTNEYLRREAPSGSRLGRPLLSSCQELWCGARPPSLLPDMTECVNTDNAAGGTDDKKHD 891
MNVG L KR+QQWE WQGNANFFAGGRI+VGSHCRALAFSATILLFTA LFFTFISLPATTYGGWAFFSTVSVCLFVGCI+SLASTAMMDPGIIPRRTLALWNSLDPASP +AERK CVTCQLARPPRAKHCK CNNCVMEFDHHCPFTGNCIGARNYRAFMAFIS+VTIS FFACALSVLHIVAPRADNVGPVLL + ARIPGSQFFPHLLALWTAVV VLVGGLL FHIFLVAKGQTTNEYLRREAPSGSRLGRP LSSC ELWCGARPPSLL DMTE VNTDN+AGGTDD HD
Sbjct: 1 MNVGSLRKRRQQWECWQGNANFFAGGRIVVGSHCRALAFSATILLFTATLFFTFISLPATTYGGWAFFSTVSVCLFVGCIISLASTAMMDPGIIPRRTLALWNSLDPASPDVAERKSCVTCQLARPPRAKHCKRCNNCVMEFDHHCPFTGNCIGARNYRAFMAFISIVTISEFFACALSVLHIVAPRADNVGPVLLVNWARIPGSQFFPHLLALWTAVVMVLVGGLLSFHIFLVAKGQTTNEYLRREAPSGSRLGRPFLSSCHELWCGARPPSLLSDMTESVNTDNSAGGTDDTNHD 297
BLAST of mRNA_E-siliculosus-1a_F_contig1488.2837.1 vs. uniprot
Match: A0A6H5KNK6_9PHAE (Palmitoyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNK6_9PHAE) HSP 1 Score: 291 bits (745), Expect = 5.500e-89 Identity = 146/289 (50.52%), Postives = 192/289 (66.44%), Query Frame = 1
Query: 7 VGPLLKRKQQWEYWQGNANFFAGGRIMVGSHCRALAFSATILLFTAALFFTFISLPATTYGGWAFFSTVSVCLFVGCIVSLASTAMMDPGIIPRRTLALWNSLDPASPGIAER-KFCVTCQLARPPRAKHCKWCNNCVMEFDHHCPFTGNCIGARNYRAFMAFISMVTISAFFACALSVLHIVAPRADNVGPVLLTSRARIPGSQFFPHLLALWTAVVTVLVGGLLCFHIFLVAKGQTTNEYLRREAPSGSRLGRPLLSSCQELWCGARPPSLLPDMTECVNTDNAAGG 870
+ P K++W+ W+GN FF GRIM+G H R L + +L T LFF FI LP+ YG W+F + V+ CL GC VSL ++ +DPGIIPRR + D + ++ +C+TC + RPPR KHCK CNNCV+ FDHHCP+TGNC+GARNYRAFMAFI +VTIS+ CA+SV+H V R +VGP+ LT +PGS+ +L +WTA++TVLVG LLCFH++L+AKGQTTNEYLR E G+ R +C+ELWCG +P S+L DM+E GG
Sbjct: 519 ISPGGSPKKRWQRWRGNNKFFCEGRIMLGVHYRQLMTTTMLLFLTWLLFFVFI-LPS--YGRWSF-AMVAACLCTGCFVSLVFSSFLDPGIIPRRAAS--GLPDSIPEDVRDQLSYCITCHIVRPPRTKHCKHCNNCVLTFDHHCPWTGNCVGARNYRAFMAFIILVTISSSLVCAMSVVHTVT-RTGHVGPMYLTDSVNLPGSRLVSPVLGMWTAMITVLVGALLCFHVYLLAKGQTTNEYLRGEKRRGNVPHRSFGPNCRELWCGTQPASMLADMSEFSTGHTVHGG 800
BLAST of mRNA_E-siliculosus-1a_F_contig1488.2837.1 vs. uniprot
Match: D7FZN5_ECTSI (Palmitoyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZN5_ECTSI) HSP 1 Score: 254 bits (650), Expect = 9.870e-79 Identity = 127/266 (47.74%), Postives = 173/266 (65.04%), Query Frame = 1
Query: 28 KQQWEYWQGNANFFAGGRIMVGSHCRALAFSATI---LLFTAALFFTFISLPATTYGGWAFFSTVSVCLFVGCIVSLASTAMMDPGIIPRRTLALWNSLDPASPGIAER-KFCVTCQLARPPRAKHCKWCNNCVMEFDHHCPFTGNCIGARNYRAFMAFISMVTISAFFACALSVLHIVAPRADNVGPVLLTSRARIPGSQFFPHLLALWTAVVTVLVGGLLCFHIFLVAKGQTTNEYLRREAPSGSRLGRPLLSSCQELWCGARP 813
K++W+ W+GN FF GR R ++ + AAL ++ +YG W+F + V+ CL GC VSL ++ +DPGIIPRR + D + ++ +C+TC + RPPR KHCK CNNCV+ FDHHCP+TGNC+GARNYR+FMAFI ++TIS+ CA+SV+H V R +VGP+ LT +PGS+F +L LWTA++TVLVG LLCFH++L+AKGQTTNEYLR E G+ R +C+ELWCG +P
Sbjct: 174 KKRWQRWRGNNKFFCEGRFFFRGGGRGTQGGGSLGSGVGGVAALAWSECCCSLPSYGRWSF-ALVAACLCTGCFVSLVFSSFLDPGIIPRRAAS--GLPDSIPEDVRDQLSYCITCHIVRPPRTKHCKHCNNCVLTFDHHCPWTGNCVGARNYRSFMAFIILITISSSLVCAMSVVHTVT-RTGHVGPMYLTDSVNLPGSRFVSPVLGLWTAMITVLVGALLCFHVYLLAKGQTTNEYLRGEKRRGNVPHRSFGPNCRELWCGTQP 435
BLAST of mRNA_E-siliculosus-1a_F_contig1488.2837.1 vs. uniprot
Match: A0A6H5LMK7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LMK7_9PHAE) HSP 1 Score: 239 bits (609), Expect = 2.950e-76 Identity = 131/218 (60.09%), Postives = 136/218 (62.39%), Query Frame = 1
Query: 160 FISLPATTYGGWAFFSTVSVCLFVGCIVSLASTAMMDPGIIPRRTLALWNSLDPASPGIAERKFCVTCQLARPPRAKHCKWCNNCVMEFDHHCPFTGNCIGARNYRAFMAFISMVTISAFFACALSVLHIVAPRADNVGPVLLTSRARIPGSQFFPHLLALWTAVVTVLVGGLLCFHIFLVAKGQTTNEYLRREAPSGSRLGRPLLSSCQELWCGARP 813
F SLPATTYG AFFSTVSVCLFVGCIVSLASTAMMDPGIIPRRTLALWNSLDPASPGIAERKFC +CQLARPPRAK+CK GSQF PHLLALWTAVV +LVGGLLCFH+FLV K QTTN YLRREAPSGSRLGRP L+SC ELW GARP
Sbjct: 16 FFSLPATTYGVQAFFSTVSVCLFVGCIVSLASTAMMDPGIIPRRTLALWNSLDPASPGIAERKFCGSCQLARPPRAKYCK----------------------------------------------------------------------GSQFVPHLLALWTAVVMILVGGLLCFHVFLVTKSQTTNLYLRREAPSGSRLGRPFLASCHELWSGARP 163
BLAST of mRNA_E-siliculosus-1a_F_contig1488.2837.1 vs. uniprot
Match: A0A835YZ83_9STRA (Palmitoyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ83_9STRA) HSP 1 Score: 217 bits (553), Expect = 1.810e-65 Identity = 116/282 (41.13%), Postives = 170/282 (60.28%), Query Frame = 1
Query: 16 LLKRKQQWEYWQGNANFFAGGRIMVGSHCRALAFSATILLFTAALFFTFISLPATTYGGWAFFSTVSVCLFVGCIVSLASTAMMDPGIIPRRTLA-LWNSLDPASPGIAERKFCVTCQLARPPRAKHCKWCNNCVMEFDHHCPFTGNCIGARNYRAFMAFISMVTISAFFACALSVLHIVAPRADNVGPVLLTSRARIPGSQFFPHLLALWTAVVTVLVGGLLCFHIFLVAKGQTTNEYLRREAPSGSRLGRPLLSSCQELWCGARPPSLLPDMTECVNTDN 858
+ ++ W+ W+GNA F G++M+G HC L + +++L T LF F+ A Y GW + V + V C+V+LA TA+ +PGIIP + + + ++ G + +C+TC + RPPRAKHC+ CN CV FDHHCP+ GNCIG RNYR+F+ F+ ++ LS +H + R NVGP LTS++ +PGS++ L +W +VT +VGGLL H++L+ +GQTTNE+L+ E P R GR ++ C LWC PPSLLP E D+
Sbjct: 41 VTTERKWWQQWRGNARFLCDGKLMLGVHCDQLWVTGSLILGTWLLFLVFV---APNYTGW-WCVGVGAAMLVLCLVTLAETAVTEPGIIPPQPRSDAAEGMSASTRG--KLNYCITCHIVRPPRAKHCRHCNVCVRRFDHHCPWIGNCIGHRNYRSFLRFLIVLAXXXXXXXXLSAIHALT-RLGNVGPEDLTSQSGVPGSEYVSPFLGVWALLVTAIVGGLLLLHMYLLFQGQTTNEFLKGE-PVHVR-GR-VMRKCLLLWCERLPPSLLPPFDEYPTQDD 312
BLAST of mRNA_E-siliculosus-1a_F_contig1488.2837.1 vs. uniprot
Match: A0A812WJG5_SYMMI (Palmitoyltransferase n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812WJG5_SYMMI) HSP 1 Score: 177 bits (450), Expect = 1.170e-49 Identity = 111/283 (39.22%), Postives = 154/283 (54.42%), Query Frame = 1
Query: 28 KQQWEYWQGNANFFAGGRIMVGSHCRALAFSATILLFTAALFFT----FISLPATTYGGWAFFSTVSVCLFVGCIVSLASTAMMDPGIIPRRTLALWNSLDPASPGIAER-KFCVTCQLARPPRAKHCKWCNNCVMEFDHHCPFTGNCIGARNYRAFMAFISMVTISAFFACALSVLHIVA-PRADNVGPVLLTSRARIPGSQFFPHLLALWTAVVTVLVGGLLCFHIFLVAKGQTTNEYLRREAPSGSRLGRPLLSSCQELWCGARPPSLLPDMTECVNTDN 858
K +++ W+G F GGRIM+G+H L S T+L+ T +LF + +P Y + V L VG + L TA+ +PGIIPRR + L+ S ++ ++C TC++ RPPRAKHC++C+NCV FDHHCP+TG CIG RNY F FI++ T+SA FAC+ S IV N P LL + L+ +T +V VLVG LL FH+FL+ + QTTNE+LR PS S + +L + P S L M E D+
Sbjct: 83 KFRYQLWEGKNKFLCGGRIMMGAHSNHLLLSITLLVVTYSLFLLGVVPLLHMPILFY--------IGVGLAVGTLTFLLLTALTEPGIIPRRPPS--KLLESMSEDARQKLQYCHTCRIVRPPRAKHCRYCDNCVEVFDHHCPWTGTCIGVRNYAYFCVFITLATVSAAFACSTSAYLIVQWAEGRNHEPRLLMYIRDVVAP-----LVCAFTLLVFVLVGSLLAFHLFLIGRQQTTNEFLRGVRPSHSDYKNSTTGNVVKLCNTSIPDSKLLPMWEKCQADD 350
BLAST of mRNA_E-siliculosus-1a_F_contig1488.2837.1 vs. uniprot
Match: A0A7S3UWP6_HETAK (Palmitoyltransferase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWP6_HETAK) HSP 1 Score: 170 bits (430), Expect = 9.010e-47 Identity = 89/210 (42.38%), Postives = 116/210 (55.24%), Query Frame = 1
Query: 223 LFVGCIVSLASTAMMDPGIIPRRTLALWNSLDPASPGIAER-KFCVTCQLARPPRAKHCKWCNNCVMEFDHHCPFTGNCIGARNYRAFMAFISMVTISAFFACALSVLHIVAPRAD---NVGPVLLTSRARIPGSQFFPHLLALWTAVVTVLVGGLLCFHIFLVAKGQTTNEYLRREAPSGSRLGRPLLSSCQELWCGARPPSLLPDMTE 840
L + L TA+ DPGIIPR + ++ P + E+ +C TC + RPPR KHC+ CNNC+ FDHHCP+TGNCIG RNYR F F+ +T S+ + +S ++ D + +I G QF LL LWT +VT LVG LL FHI L+ +GQTTNEYLR E G + ++C LWC P S L M E
Sbjct: 9 LMAASVAFLLVTALRDPGIIPRHPPS--QLVESMPPEMKEKMNYCPTCHIVRPPRTKHCRHCNNCIQTFDHHCPWTGNCIGRRNYRFFYLFLMSITASSAYVLVMSANYLTRHLTDIDSKYFDAIFKDEWKIKGGQFIAPLLILWTLLVTTLVGALLVFHIILLGRGQTTNEYLRGEKNRGDIPHGNIFTNCGNLWCHDMPESRLLPMWE 216
BLAST of mRNA_E-siliculosus-1a_F_contig1488.2837.1 vs. uniprot
Match: F0Y087_AURAN (Palmitoyltransferase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y087_AURAN) HSP 1 Score: 154 bits (388), Expect = 6.240e-41 Identity = 91/244 (37.30%), Postives = 128/244 (52.46%), Query Frame = 1
Query: 10 GPLLKRKQQWEYWQGNANFFAGGRIMVGSHCRALAFSATILLFTAALFFTFISLPATTYGGWAFFSTVSVCLFVGCIVSLASTAMMDPGIIPRRTLALWNSLDPASPGIAERKFCVTCQLARPPRAKHCKWCNNCVMEFDHHCPFTGNCIGARNYRAFMAFISMVTISAFFACALSVLHIVAPRADNVGPVLLTSRARIPGSQFFPHLLALWTAVVTVLVGGLLCFHIFLVAKGQTTNEYLRRE 741
G +++E W GN FF GGR+M+G C L +A ++ T A F F++ P + ++V C V LA+ A DPGI+PR + S P +C TCQ+ RPPRAKHC++C+NCV FDHHCP+ G C+GARNYRAF+ F+ A + C+ + ++V V S G + W+AVV + V L+ FH++L+ QTTNEYLR E
Sbjct: 20 GKARSSFKRYEQWPGNNFFFCGGRLMLGVDCDRLLATALLIATTWAGHF-FVTWPNLDFDERCGAGGIAVL----CFVCLAAAATRDPGIVPRLPRSDRLSGLPCETQY-RMNWCQTCQILRPPRAKHCRYCDNCVRVFDHHCPWLGTCVGARNYRAFVLFLVWTLAGALYVCSRAARYLV-----RCSTVHACSAYVDFGRPIVAGISVAWSAVVALPVATLIAFHLYLMGHDQTTNEYLRDE 252
BLAST of mRNA_E-siliculosus-1a_F_contig1488.2837.1 vs. uniprot
Match: A0A7R9UDC7_9STRA (Palmitoyltransferase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UDC7_9STRA) HSP 1 Score: 153 bits (387), Expect = 8.790e-40 Identity = 93/248 (37.50%), Postives = 133/248 (53.63%), Query Frame = 1
Query: 7 VGPLLKRKQQWEYWQGNANFFAGGRIMVGSHCRALAFSATILLFTAALFFTFISLPATTYGGWAFFSTVSVCLFVGCIVSLASTAMMDPGIIPRRTLALWNSLDPASPGIAERK-FCVTCQLARPPRAKHCKWCNNCVMEFDHHCPFTGNCIGARNYRAFMAFISMVTISAFFACALSVLHIVAPRADNVGPVLLTSRARIPGSQFFPHLLAL----WTAVVTVLVGGLLCFHIFLVAKGQTTNEYLR 735
V L K+ +E W+G +F GRIM+G+ L + ++L T +F I +P A +S LF +V+L TA+ DPGI+PRR + P + ER +C TC + +P R KHC+ C+NCV EFDHHCP+ GNCIGARNYR F+ FI ++ F ++S+ ++ L+ PG+ +LAL WT ++T LVG L FH L+ GQTTNEY++
Sbjct: 107 VSTLDMSKKHFEQWKGRNSFLLRGRIMLGAMAHQLGITLVLMLITWGIFLCLI-VPLLRN---AVLVVLSFMLFTTQLVALLCTALTDPGILPRRPPSAVVESMPMQ--MKERMHYCPTCHIIKPHRTKHCRICDNCVQEFDHHCPWVGNCIGARNYRFFLLFIISTVLACVFVLSVSLYAFLSGTGG-----LIVQVQDDPGADTVLRVLALVLVFWTFLLTALVGALTFFHCSLMCMGQTTNEYVK 343
BLAST of mRNA_E-siliculosus-1a_F_contig1488.2837.1 vs. uniprot
Match: A0A6A7G8Q1_9CRUS (Palmitoyltransferase n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7G8Q1_9CRUS) HSP 1 Score: 148 bits (374), Expect = 2.960e-39 Identity = 87/235 (37.02%), Postives = 125/235 (53.19%), Query Frame = 1
Query: 37 WEYWQGNANFFAGGRIMVGSHCRALAFSATILLFTAALFFTFISLPATTYGGWAFFSTVSVCLFVGCIVSLASTAMMDPGIIPRRTLALWNSLDPASPGIAERKFCVTCQLARPPRAKHCKWCNNCVMEFDHHCPFTGNCIGARNYRAFMAFISMVTISAFFACALSVLHIVAPRADNVGPVLLTSR-ARIPGSQFFPHLLALWTAVVTVLVGGLLCFHIFLVAKGQTTNEYLRR 738
W+ W GN F GRIM+GS L + +L +F F+ Y + V LF C+V L A+ DPGI+PR + + P ++C TC+L RPPRAKHCK+C+NCV +FDHHCP+ G C+G RNYR F+ F+ V +++ F A SV +V ++ +R A S L ++TA V + V GL +H+ L+ +GQTTNE +R+
Sbjct: 19 WKQWPGNNIFLCHGRIMLGSDVSFLGVTVVLLTGPFVIFILFVGFEIH-YS----LAIVGAVLFAICLVFLTQAALTDPGILPRSNIPRPDPHQPHQITARGFRYCSTCKLYRPPRAKHCKYCDNCVRQFDHHCPWVGTCVGLRNYRFFVYFVFSVCLTSGFVFATSVAVLVLNTTNSDADGHWINRFADAITSNPASLALVIFTAFVFLSVLGLASYHVNLILQGQTTNENMRQ 248 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1488.2837.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1488.2837.1 >prot_E-siliculosus-1a_F_contig1488.2837.1 ID=prot_E-siliculosus-1a_F_contig1488.2837.1|Name=mRNA_E-siliculosus-1a_F_contig1488.2837.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=297bp MNVGPLLKRKQQWEYWQGNANFFAGGRIMVGSHCRALAFSATILLFTAALback to top mRNA from alignment at E-siliculosus-1a_F_contig1488:9296..12657+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1488.2837.1 ID=mRNA_E-siliculosus-1a_F_contig1488.2837.1|Name=mRNA_E-siliculosus-1a_F_contig1488.2837.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=3362bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1488:9296..12657+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1488:9296..12657+ >mRNA_E-siliculosus-1a_F_contig1488.2837.1 ID=mRNA_E-siliculosus-1a_F_contig1488.2837.1|Name=mRNA_E-siliculosus-1a_F_contig1488.2837.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1782bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1488:9296..12657+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |