mRNA_E-siliculosus-1a_F_contig1487.2834.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1487.2834.1 vs. uniprot
Match: D7FT47_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT47_ECTSI) HSP 1 Score: 1363 bits (3529), Expect = 0.000e+0 Identity = 787/838 (93.91%), Postives = 797/838 (95.11%), Query Frame = 3
Query: 66 MVDYSKWDNLDSDDSDSGSDGXXXXXXXXXXXQPSARKAADDKRQLDQADALRLQGNSAYELGDVSKAIAAYDAQLRVLEGRKDEAAVEMTCGALLNQASGFISLKKFEEAEARCSRLLASATPRGGTKAYGGAEARTRALHFRGFARLRLGLFDGACSDLRSSLAAGTSSGDEARALLLEAEAGAAMSSCPDPEAEGREHLRQGRGREAAKSFRDAASRARRRKDAAGAEAGEGAVATTVALSRNLRLEGIAVAMAGDPPSAEMLLRAALREFRVEGXXXXXXXXXXXXXEEEGLTLAALGSLLAQRGKHADALKPLREAVAVLDEAIAGVSANEGGAANSSAGTNAGSSPPTPSTTEGRITALTRTLTGTLAFLGTSLLAPEVQPSANYGSSXXXXXXXXXXXGVTPGVMKEGAEKVTVPAPGFSCDGKGPIVADSGAAGSSKEADEAIDVLKRAHEMLKAETAAMAAAGPGQKGGPAGVYSAVGESRGEADVRKQTAKVLDTLSEAYGREKRWERARSAAEQSLTAWRSLGAAGRVGAAASLLSLGHLLLQLHGVGAGFEEASTRWEEAATCFKDCAERPSVEAEVRLKIAGYYTKVARSDPARLESLEGKISAHYSEAAVLFARERDEKTSSLKRAAEAVAAAQAPRDKTAEGSGSAEPVPPLPPPLVDSLEPDGRSRWELAEKEAFAWEGCAGAAGDDHEAAVRALTKAEKLLDHASVSDKNERWTLRKVGVLDSLALALARSGEHAMAENKLLEAIRELQELDGVDSNAEACAHKGTLTNLYKYLAIARRARGDLPGAKEALAKVETLGGCEGREELEGLNRLLAESAVSVG 2579
MVDYSKWDNLDSDDS SGSDGXXXXXXXXXXX PSARKAADDKRQLDQA+ALRLQGNSAYELGDVSKAIAAYDAQLRVLEGRKDEAAVEMTCGALLNQASGFISLKKF+EAEARCSRLLASATPRGGTKAYGGAEARTRALHFRGFAR RLGLFDGACSDLRSSLAAGTSSGDEARALLLEAEAGAAMSSCPDPEAEGREHLRQGRGREAAKSFRDAASRARRRKDAAGAEAGEGAVATTVALSRNLRLEGIAVAMAGDPPSAEMLLR ALR+ RV GXXXXXXXXXXXXXEEEGLTLAALGSLLAQRGKHADAL+PLREAVAVLDEAIAGVSANEGG ANSSAGTNA SSPPTPS TEGRITALTRTLTGTLAFLGTSLLAPEVQPSANYGS+ GVTPGVMK GAEKVTVPAPGFSCD KGPIVADSG AGSSKEADEAIDVLKRAHEMLKAET AMA AGPGQKGG AGVYSAVGESRGEADVRKQTAKVLDTLSEAYGREKRWERAR AAEQSLTAWRSLG AGRVGAAASLLSLGHLLLQLHGVGAGFEEAS RWEEAATCFK CAERPSVEAEVRLKIAGYYTKVARSDPARLESLEGKISAHYSEAAVLFARERDEKTSSLKRAAEAVAAAQAPRDKTAEGSGSAEPVPPLPPPLVDSLEPDGRSRWELAE+EAFAWEG AGAAG+DHEAAV AL KAEKLLDHASVSDK+ERWTLRKVGVL SLALALARSGEHAMAENKLLEAIRELQ+LDGVDS AEAC HKGTLT+LYKYLAI RRARGD GAK ALAKVETLGGCEG EELEGLNRLLAESAVSVG
Sbjct: 1 MVDYSKWDNLDSDDSGSGSDGXXXXXXXXXXX-PSARKAADDKRQLDQAEALRLQGNSAYELGDVSKAIAAYDAQLRVLEGRKDEAAVEMTCGALLNQASGFISLKKFKEAEARCSRLLASATPRGGTKAYGGAEARTRALHFRGFARFRLGLFDGACSDLRSSLAAGTSSGDEARALLLEAEAGAAMSSCPDPEAEGREHLRQGRGREAAKSFRDAASRARRRKDAAGAEAGEGAVATTVALSRNLRLEGIAVAMAGDPPSAEMLLRTALRDLRVGGXXXXXXXXXXXXXEEEGLTLAALGSLLAQRGKHADALEPLREAVAVLDEAIAGVSANEGGVANSSAGTNARSSPPTPSITEGRITALTRTLTGTLAFLGTSLLAPEVQPSANYGSNGSSTTTTSSG-GVTPGVMKGGAEKVTVPAPGFSCDDKGPIVADSGEAGSSKEADEAIDVLKRAHEMLKAETVAMATAGPGQKGGLAGVYSAVGESRGEADVRKQTAKVLDTLSEAYGREKRWERARLAAEQSLTAWRSLGVAGRVGAAASLLSLGHLLLQLHGVGAGFEEASARWEEAATCFKGCAERPSVEAEVRLKIAGYYTKVARSDPARLESLEGKISAHYSEAAVLFARERDEKTSSLKRAAEAVAAAQAPRDKTAEGSGSAEPVPPLPPPLVDSLEPDGRSRWELAEQEAFAWEGYAGAAGEDHEAAVTALAKAEKLLDHASVSDKDERWTLRKVGVLHSLALALARSGEHAMAENKLLEAIRELQQLDGVDSIAEACVHKGTLTDLYKYLAIVRRARGDFAGAKAALAKVETLGGCEGSEELEGLNRLLAESAVSVG 836 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1487.2834.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1487.2834.1 >prot_E-siliculosus-1a_F_contig1487.2834.1 ID=prot_E-siliculosus-1a_F_contig1487.2834.1|Name=mRNA_E-siliculosus-1a_F_contig1487.2834.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=839bp MVDYSKWDNLDSDDSDSGSDGAAAAVKTKQQQQPSARKAADDKRQLDQADback to top mRNA from alignment at E-siliculosus-1a_F_contig1487:18595..27044- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1487.2834.1 ID=mRNA_E-siliculosus-1a_F_contig1487.2834.1|Name=mRNA_E-siliculosus-1a_F_contig1487.2834.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=8450bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1487:18595..27044- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1487:18595..27044- >mRNA_E-siliculosus-1a_F_contig1487.2834.1 ID=mRNA_E-siliculosus-1a_F_contig1487.2834.1|Name=mRNA_E-siliculosus-1a_F_contig1487.2834.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=5034bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1487:18595..27044- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |