mRNA_E-siliculosus-1a_F_contig1485.2828.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1485.2828.1 vs. uniprot
Match: D7FRN2_ECTSI (RNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRN2_ECTSI) HSP 1 Score: 625 bits (1612), Expect = 1.580e-200 Identity = 408/453 (90.07%), Postives = 413/453 (91.17%), Query Frame = 3
Query: 798 RARDERLKILKRAMRERDQGAEFLAQQRIEALRQAKVEGCERVVGAIQASRIKVLRKLTKARKAMPTQGHEQSQRRDIIKEYSDFGSGVYAPITRLGRRIDQDSERFALPSATKSLGTYHGISVLEATMNPALTRTVIKKPSRVKPRATTTIARKLRAVEVDLEKTAALLKARKGAAAPGSAKLSAANPNNRSGKNVLGTEGAVDDATAMPAWRNKTSRKERPQTPRVPDPPEDEQEHLAVLLLQRLIRGRAVQNVMFEGKERRKELIRELRIAKQLEDDSEQARKVQAKAIEARRHRVCKAALDNMAGEAVGALFATMADRAMGIDVDGKGTGAGSTPDSQHKDSRGTAAAAGSGGVRSHGGAGNESRGDQRDEGRNDGGKGESDAVKNGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIRSVSSDRVSTPRDDDETLAS 2156
RARDERLKILKRAMRERDQGAEFLAQQRIEALRQAKVEGCERVVGAIQASRIKVLRKLTKARKAMPTQGHEQSQRRDII+EYSDFGSGVYAPITRLGRRIDQDSERFALPSATKSL TYHGIS LEATMNPALTRTVIKKPSRVKPRATTTIARKLRAVEVDLEKTAALLKARKGAAAPGSAKL+ ANPNNRSGKN LGTEGAVDDATAMPAWRNKTSRKERPQTPRVPDPPEDEQEHLAVLLLQRLIRGRAVQNVMFEGKERRKELIRELRIAKQLEDDSEQARKVQAKAIEARRHRVCKAALDNMAGEAVG+LFATMADRAMGIDVDGKGTGAGS +SQH+DSR AA AGSGGV SH G G XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIRSVSSDRVSTPRDDDET AS
Sbjct: 1447 RARDERLKILKRAMRERDQGAEFLAQQRIEALRQAKVEGCERVVGAIQASRIKVLRKLTKARKAMPTQGHEQSQRRDIIQEYSDFGSGVYAPITRLGRRIDQDSERFALPSATKSLSTYHGISALEATMNPALTRTVIKKPSRVKPRATTTIARKLRAVEVDLEKTAALLKARKGAAAPGSAKLAEANPNNRSGKNALGTEGAVDDATAMPAWRNKTSRKERPQTPRVPDPPEDEQEHLAVLLLQRLIRGRAVQNVMFEGKERRKELIRELRIAKQLEDDSEQARKVQAKAIEARRHRVCKAALDNMAGEAVGSLFATMADRAMGIDVDGKGTGAGSALESQHEDSRVGAATAGSGGVGSHSGEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIRSVSSDRVSTPRDDDETPAS 1899
BLAST of mRNA_E-siliculosus-1a_F_contig1485.2828.1 vs. uniprot
Match: A0A835ZDB6_9STRA (Cilia- and flagella-associated protein 91 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDB6_9STRA) HSP 1 Score: 193 bits (491), Expect = 1.720e-50 Identity = 108/193 (55.96%), Postives = 134/193 (69.43%), Query Frame = 1
Query: 1 MSSTRVMESRALDHYYDPVYTTPFEDNGLYKPLRPAIKADGGNAIIGPNMTKYLKRPVIPQLNSVAPEVLLAPTLNEDPMEAPWEEQETFTKDVGSQTKYRESEAQTVPYSRDFVLDPESEEPEVLMLQGLVHGAGLPVGKREVEMLTHARAKRLLEASLPPFTDEASLALRKKLMEKQELTELGLRERELTR 579
MS VMESRALDH YD V+ +P +DN YK RP++ A GG + G N KY KRP++P LN+ +P V DP + P E+E +T++ G+QT YRES+AQT PYS +F + EPE+LMLQGL GAGLPVG +EVE+L HAR +R +EASLPP TDEASL LRKKLME+QE+ EL LR EL R
Sbjct: 1 MSRFHVMESRALDHRYDTVFASPLQDNAAYKAKRPSLDASGG--VGGRNTYKYFKRPIVPLLNAASPNV-------GDPKKPPTPEEEPYTREAGTQTLYRESDAQTDPYSPEFAVPEGVSEPELLMLQGLGAGAGLPVGLQEVELLEHARERRRVEASLPPSTDEASLMLRKKLMEEQEVRELRLRASELDR 184
BLAST of mRNA_E-siliculosus-1a_F_contig1485.2828.1 vs. uniprot
Match: F0XZA1_AURAN (Cilia- and flagella-associated protein 91 (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZA1_AURAN) HSP 1 Score: 157 bits (398), Expect = 9.070e-39 Identity = 120/281 (42.70%), Postives = 159/281 (56.58%), Query Frame = 3
Query: 801 ARDERLKILKRAMRERDQGAEFLAQQRIEALRQAKVEGCERVVGAIQASRIKVLRKLTKARKAM------PTQGHEQSQRRDIIKEYSDFGSGVYAPITRLGRRIDQDSERFALPSATKSLGTYHGISVLEATMNPALTRTVIKKPSRV-KPRATTTIARKLRAVEVDLEKTAALLKARKGAAAPGSAKLSAANPNNRSGKNVLGTEGAVDDATAMPAWRNKTSRKERPQTPRVPDPPED-EQEHLAVLLLQRLIRGRAVQNVMFEGKERRKELIRELRIA 1619
A +ERL +L++A+ +RDQ EFLA+QR+EALRQ ++E +R V IQ+ RIKVLRKL+ AR + P +S RDII EY + S VYAPI RLG+R D+D E F + LG + ++ LE + LT T + KP + A T+ R + + DL K +L +K A ++ K++L P+WR + S+ ERP TPRV ED E +AV L QRLIRGRAVQN M+EGKERR ELIRELR A
Sbjct: 108 AHEERLDLLRQALVDRDQDNEFLAEQRVEALRQRQIEERDRSVEQIQSQRIKVLRKLSMARGRLQMPASEPPGSKRRSGNRDIISEYGTYSSRVYAPIARLGQRPDKDGEVFDVTRRVPDLGNHGVLASLEYNLPGHLTATKVTKPENENEATARTSKDRHKQQLAADLLKMNTILATKK----------EIAEDPEKAKKDLL------------PSWRTRVSKAERPPTPRVEPRDEDAEVFDMAVKLFQRLIRGRAVQNQMYEGKERRLELIRELRAA 366
BLAST of mRNA_E-siliculosus-1a_F_contig1485.2828.1 vs. uniprot
Match: A0A7S2V431_9STRA (Cilia- and flagella-associated protein 91 (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V431_9STRA) HSP 1 Score: 156 bits (394), Expect = 1.980e-38 Identity = 82/150 (54.67%), Postives = 106/150 (70.67%), Query Frame = 1
Query: 124 GNAIIGPNMTKYLKRPVIPQLNSVAPEVLLAPTLNEDPMEAPWEEQETFTKDVGSQTKYRESEAQTVPYSRDFVLDPESEEPEVLMLQGLVHGAGLPVGKREVEMLTHARAKRLLEASLPPFTDEASLALRKKLMEKQELTELGLREREL 573
G ++G N + +RP++P L +VAPEVLLAPT DP+ P E TK+ +QTKYRESEAQT PY+ DF + + EPEVLML+ L + GLPVG RE+ M+ +AR KR L+ +LPPFTD+ASL LRKKLME+QE+ E LR +EL
Sbjct: 3 GGDVMGSNRVHFFRRPIVPHLQAVAPEVLLAPTSQRDPLVPPEVVTEPRTKEASAQTKYRESEAQTDPYTPDFFVPRDRPEPEVLMLENLTYDNGLPVGMREIRMIEYAREKRRLDEALPPFTDQASLLLRKKLMEQQEMREFELRSKEL 152
BLAST of mRNA_E-siliculosus-1a_F_contig1485.2828.1 vs. uniprot
Match: A0A7S3M5Z5_9STRA (Cilia- and flagella-associated protein 91 n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M5Z5_9STRA) HSP 1 Score: 151 bits (381), Expect = 6.130e-35 Identity = 81/147 (55.10%), Postives = 111/147 (75.51%), Query Frame = 1
Query: 133 IIGPNMTKYLKRPVIPQLNSVAPEVLLAPTLNEDPMEAPWEEQETFTKDVGSQTKYRESEAQTVPYSRDFVLDPESEEPEVLMLQGLVHGAGLPVGKREVEMLTHARAKRLLEASLPPFTDEASLALRKKLMEKQELTELGLREREL 573
+ G + KY KRP++P++++VAP++LLAPT EDP+ E KDV QT YRESEAQTVPY+ ++++ +E PEVL+L+ L + GLP+GK+EVEM+ +ARAKR +E++LPPFTDEASL LRKKLMEKQE+ E +RE E+
Sbjct: 15 VSGTDRYKYFKRPIMPRVSAVAPQILLAPTTAEDPLVPTDNRVEASVKDVEVQTAYRESEAQTVPYTPNYIVTG-TEAPEVLLLKDLTYENGLPLGKKEVEMIEYARAKRDMESNLPPFTDEASLILRKKLMEKQEMREFKMRETEI 160
BLAST of mRNA_E-siliculosus-1a_F_contig1485.2828.1 vs. uniprot
Match: A0A067CGM0_SAPPC (Cilia- and flagella-associated protein 91 n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CGM0_SAPPC) HSP 1 Score: 140 bits (354), Expect = 3.040e-31 Identity = 88/215 (40.93%), Postives = 121/215 (56.28%), Query Frame = 1
Query: 10 TRVMESRALDHYYDPVYT---TPFEDNGLYKPLR-------PAIKADGGNAIIGPNMTKYLKRPVIPQLNSVAPEVLLAPTLNEDPMEAPWEEQETFTKDVGSQTKYRESEAQTVPYSRDFVLDPESEEPEVLMLQGLVHGAGLPVGKREVEMLTHARAKRLLEASLPPFTDEASLALRKKLMEKQELTELGLRERELTRRAVVHDL*VHLQHSA 624
+R + +RALD YDPVYT T + G Y+P P+ +DG A+ G KY KRP++P + +V PE+LL+P + ++ T+ VG QT YR+SEAQT PY+ D+ + + PE+ L L GLP G E+E++ R KR +ASLPP TDEAS +LRKK+ME+QE E RE E+ R VHD + L A
Sbjct: 2 SRTIPTRALDAVYDPVYTVSNTGGQWKGGYRPHHHSRRSGVPSTTSDGQVAVSGAQRAKYFKRPILPYVQTVPPEILLSPVAKTAELNHAADDDLEPTRSVGVQTMYRDSEAQTTPYTPDYTIKVGTS-PEIATLANLTFADGLPAGMAEIELIERNRKKRAFDASLPPMTDEASFSLRKKMMEQQEKAEWAFREVEIDR---VHDQRLQLLEKA 212
BLAST of mRNA_E-siliculosus-1a_F_contig1485.2828.1 vs. uniprot
Match: A0A1V9YGS3_9STRA (Cilia- and flagella-associated protein 91 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YGS3_9STRA) HSP 1 Score: 139 bits (349), Expect = 1.200e-30 Identity = 86/206 (41.75%), Postives = 119/206 (57.77%), Query Frame = 1
Query: 10 TRVMESRALDHYYDPVYT---TPFEDNGLYKPLRPAIKA-------DGGNAIIGPNMTKYLKRPVIPQLNSVAPEVLLAPTLNEDPMEAPWEEQETFTKDVGSQTKYRESEAQTVPYSRDFVLDPESEEPEVLMLQGLVHGAGLPVGKREVEMLTHARAKRLLEASLPPFTDEASLALRKKLMEKQELTELGLRERELTRRAVVHD 597
+R + +RALD YDPVYT T + G Y+P + ++ +G A+ G KY KRP++P + +V PE+LL+P +E+ +E T+ V QT YR+SEAQT PY+ D+ + + PE+ L L GLP G E+E++ R KR EASLPP TDEAS LRKK+ME+QE +E RE E+ R VHD
Sbjct: 2 SRTIPARALDAVYDPVYTVSNTGGQWKGGYRPHHHSRRSGGSYNNSEGQTAVSGAERAKYFKRPILPYVQAVPPEILLSPVAKSSMVESTLDEDLEPTRSVAVQTMYRDSEAQTNPYTPDYTIKVGTA-PEIATLANLTFANGLPAGMAEIELIERNRKKRAFEASLPPMTDEASFLLRKKMMEQQEKSEWAFREVEIDR---VHD 203
BLAST of mRNA_E-siliculosus-1a_F_contig1485.2828.1 vs. uniprot
Match: A0A7S3XWB5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XWB5_HETAK) HSP 1 Score: 133 bits (335), Expect = 1.440e-30 Identity = 104/257 (40.47%), Postives = 143/257 (55.64%), Query Frame = 3
Query: 1023 RDIIKEYSDFGSGVYAPITRLGRRIDQDSERFAL-PSATKSLGTYHGISVLEATMNPALTRTVIKK--PSRVKPRATTTIARKLRAVEVDLEKTAALLKARKGAAA-------PGSAKLSAANPNNRSGKNVLGTEGAVDDATAMPAWRNKTSRKERPQTPRVPDPPED----EQEH--LAVLLLQRLIRGRAVQNVMFEGKERRKELIRELRIAKQLEDDSEQARKVQAKAIEARRHRVCKAALDNMAGEAVGALF 1745
RDII EY+DF S VYAP+TRLGR D+++++F + P G+ G++ LE T+ L + + K P +KPR+T RK +++ DLE++ A++ +K A PG+ AA G A ++MPAWR K R +RP TP + P E+ EQE +AVLLLQRL+RGRA+QN MFEGKERRK LI ELR + E D+E+ ++ A R + AA D GEAV L
Sbjct: 1 RDIIAEYADFDSAVYAPVTRLGRHPDKEAQKFDVGPRGAAPAGSLQGLAELERTLPRGLASSAVPKAKPRSLKPRSTE--ERKAISLQADLERSQAIVAQQKAEATLRKTQGLPGAGAAGAAAATTLKGA-------AAKLGSSMPAWRTKVMRADRPPTPIIERPEEEAMLEEQEDVAMAVLLLQRLLRGRAIQNTMFEGKERRKHLIVELRA--EAEQDAEE---MERPTTAAERAALAAAAADTAGGEAVSGLL 243
BLAST of mRNA_E-siliculosus-1a_F_contig1485.2828.1 vs. uniprot
Match: A0A7S3ZS08_9STRA (Cilia- and flagella-associated protein 91 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZS08_9STRA) HSP 1 Score: 136 bits (343), Expect = 2.610e-30 Identity = 80/184 (43.48%), Postives = 115/184 (62.50%), Query Frame = 1
Query: 22 ESRALDHYYDPVYTTPFEDNGLYKPLRPAIKADGGNAIIGPNMTKYLKRPVIPQLNSVAPEVLLAPTLNEDPMEAPWEEQETFTKDVGSQTKYRESEAQTVPYSRDFVLDPESEEPEVLMLQGLVHGAGLPVGKREVEMLTHARAKRLLEASLPPFTDEASLALRKKLMEKQELTELGLREREL 573
ESRA D Y+DP + +G P RP + KY +RP++ LN ++ VL+AP+ ++ ++ + + KD G+Q+ YRESEAQT PY+ +V+ PE +PEVLML+ L G GLP G REVE + ARAKR LEA+LPP TDE SLALR++L+E QE+ E ++++E+
Sbjct: 5 ESRAFDAYFDPTW------HGAGAPPRPRPAPFHAETQVPQERYKYFQRPLVEHLNPLSTNVLIAPSTKKEELD----DGDARVKDAGTQSTYRESEAQTDPYTPAYVV-PEGTDPEVLMLEHLKFGEGLPAGAREVEKIEQARAKRHLEANLPPATDECSLALRRRLLEWQEMKEFNIKQKEI 177
BLAST of mRNA_E-siliculosus-1a_F_contig1485.2828.1 vs. uniprot
Match: A0A1W0A1M5_9STRA (Cilia- and flagella-associated protein 91 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A1M5_9STRA) HSP 1 Score: 138 bits (348), Expect = 4.880e-30 Identity = 90/213 (42.25%), Postives = 122/213 (57.28%), Query Frame = 1
Query: 10 TRVMESRALDHYYDPVYT---TPFEDNGLYKP---LRPAIKADGGNAIIGPNMTKYLKRPVIPQLNSVAPEVLLAPTLNEDP--MEAPWEEQETFTKDVGSQTKYRESEAQTVPYSRDFVLDPESEEPEVLMLQGLVHGAGLPVGKREVEMLTHARAKRLLEASLPPFTDEASLALRKKLMEKQELTELGLRERELTRRAVVHDL*VHLQHSA 624
+R + +RALD YDPVYT T G Y+P +R + +G A+ G KY KRP++P + +V PE+LL+P N ME ++ T+ VG QT YR+SEAQT+PY+ D+ + + PE+ L L GLP G E+E++ R K EASLPP TDEAS LRKK+ME+QE +E RE E+ R VHD + L A
Sbjct: 458 SRTIPARALDAVYDPVYTVSNTGGTWRGGYRPHHHIRRSSNDEGQAAVSGTERAKYFKRPILPYVQAVPPEILLSPVSNTHQVVMEQQIDDNLEPTRSVGVQTMYRDSEAQTLPYTPDYTIKVGTS-PEIATLANLTFDNGLPAGMAEIELIERNRKKVAFEASLPPMTDEASFQLRKKMMEQQEKSEWAFREVEIDR---VHDQRIQLLQKA 666 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1485.2828.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1485.2828.1 >prot_E-siliculosus-1a_F_contig1485.2828.1 ID=prot_E-siliculosus-1a_F_contig1485.2828.1|Name=mRNA_E-siliculosus-1a_F_contig1485.2828.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=201bp MSSTRVMESRALDHYYDPVYTTPFEDNGLYKPLRPAIKADGGNAIIGPNMback to top mRNA from alignment at E-siliculosus-1a_F_contig1485:17841..24749+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1485.2828.1 ID=mRNA_E-siliculosus-1a_F_contig1485.2828.1|Name=mRNA_E-siliculosus-1a_F_contig1485.2828.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=6909bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1485:17841..24749+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1485:17841..24749+ >mRNA_E-siliculosus-1a_F_contig1485.2828.1 ID=mRNA_E-siliculosus-1a_F_contig1485.2828.1|Name=mRNA_E-siliculosus-1a_F_contig1485.2828.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1206bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1485:17841..24749+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |