mRNA_E-siliculosus-1a_F_contig1485.2827.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1485.2827.1 vs. uniprot
Match: A0A6H5KSW5_9PHAE (RNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSW5_9PHAE) HSP 1 Score: 1451 bits (3757), Expect = 0.000e+0 Identity = 765/879 (87.03%), Postives = 784/879 (89.19%), Query Frame = 1
Query: 1 RLLAQAVDGLAAAVLNAEARRFLPAAHREWFKYPVKGVVATPRANNPFYLPRLRSLDVLEFEVPEAVQKRFLQGAESRVPWLVRDHREIMALAGVEVGPGRLDDYVARYSALMWLEESQMSWDVHQYDLHDVRVTLDSSRYREGDPSTNIVGRVKVPGVLESRPRLAIGDVVRLRPPAQAKAGAKKGSEANGQHRNGGVGGVVSADGTDGSHQKLGNAPDFEVQALVSNVSLSQGVVTLLLPHPGSLTAASSSTPGSELYAKAIATAVKAARASKQAXXXXXXXXXXXXEA--------------AMDGWHCRFQLERHGLQFIHYALNRLVMFGDSVSGSSPLRYLFPEPEMLPETPLWPLPESSFEWVMPSTNDSQRTAVRDIVTGAHGQVP----------------YIIFGPPGTGKTCTVIESILQLVKLRPECRILAAGPSDTSADVICERLSRHMSREQLVRINWWQRLTAGVHPNILSYCPQDSNHGMFVPPSTITHQVVVCTCGTAGMLSVLGVDENYFTHIFVDESSNAMETELLVPLSYAGRAQIILCGDPRQLGAAVRSPAARALGLEVSLQERLMEQEMYSKHVQAPTALSSATSNGAADVRCMTQLLNNYRAHEVLLTLPSAMFYGGSLVRSAERSQTDSMLAWEELPETKAFPLLFYGIQGKDLSPLDSPSFYNPIECSKVMEIIQVLLASPKVQVSAGDIAVICAFRMQVLKLRKLLRDNNLGIVNVGQVEDFQGGEKKIVIISTTLSKRHRVEKEGKIGFLGDPKKFNVALTRAQALAVVVGNPNLLAGEEYWKELLMFCKENDAIRGCACPALEVGGREDEASLVDAVLQQSLLGGGGMDLMYPEHGDFYDQDDLQWRVML 2547
RLLAQAVDG AAAVLNAEARRFLPAAHREWFK PVKGVVATPRANNPFYLPRLRSL+VLEFEVPEAVQKRFLQGAESRVPWLVRDHREIMALAGV+VGPGRLDDYVARYSALMWLEESQMSWDVHQYDLHDVRVTLDSSRYREGDPST +VGR++VPGVLESRPRLAIGDVVRLRPPAQA GAKK SEANGQHRNGGVGGVVSADGTDGSHQKLGNAPDFEVQALVSNVSLSQGVVTLLLPHPGSLTAASSST GSELYAK IA AVKAARASKQA XX XXX + G CR +FIH+ALNRLVMF DSVSGSSPLRYLFPEP+MLPETPLWPLPESSFEWVMPSTNDSQRTAVRDIVTGAHGQ Y ++ P +T A GPSDTSADVICERLSRHMSR+QLVRINWWQRLTAGVHPNILSYCPQDSNHGMF+PPSTITHQVVVCTCGTAGMLSVLGVDENYFTHIFVDESSNAMETELLVPLSYAGRAQIILCGDPRQLGAAVRSPAARALGLEVSLQERLME++MYSKH +APTALSSATSN A DVRCMTQLLNNYRAHEVLLTLPSAMFYGGSLVRSAERSQTDSML WEELPETKAFPLLFYG+QGKDLSPLDSPSFYNPIECSKVMEIIQVLLASPKVQVS GDIAVICAFRMQVLKLRKLLRDNNLGIVNVGQVEDFQGGE+KIVIISTTLSKRHRVEKEGKIGFLGDPKKFNVALTRAQALAVVVGNPNLLAGEEYWKELLMFCKENDAIRGCACPALEVGGREDEASLVDAVLQQSLLGGGGMDLMYPEHGDFYDQDDLQWRVML
Sbjct: 84 RLLAQAVDGRAAAVLNAEARRFLPAAHREWFKCPVKGVVATPRANNPFYLPRLRSLEVLEFEVPEAVQKRFLQGAESRVPWLVRDHREIMALAGVKVGPGRLDDYVARYSALMWLEESQMSWDVHQYDLHDVRVTLDSSRYREGDPSTVVVGRLEVPGVLESRPRLAIGDVVRLRPPAQAIPGAKKVSEANGQHRNGGVGGVVSADGTDGSHQKLGNAPDFEVQALVSNVSLSQGVVTLLLPHPGSLTAASSSTAGSELYAKTIARAVKAARASKQAAXXGGXXXAAAAVRTRRRLRWTDGTAGFSWSGMACR--------RFIHHALNRLVMFEDSVSGSSPLRYLFPEPDMLPETPLWPLPESSFEWVMPSTNDSQRTAVRDIVTGAHGQASTLHHFWSSWHRQDVHCYRVYPPTRQAQTGVPDSGE-------------AVGPSDTSADVICERLSRHMSRDQLVRINWWQRLTAGVHPNILSYCPQDSNHGMFLPPSTITHQVVVCTCGTAGMLSVLGVDENYFTHIFVDESSNAMETELLVPLSYAGRAQIILCGDPRQLGAAVRSPAARALGLEVSLQERLMEKDMYSKHAKAPTALSSATSNEATDVRCMTQLLNNYRAHEVLLTLPSAMFYGGSLVRSAERSQTDSMLTWEELPETKAFPLLFYGVQGKDLSPLDSPSFYNPIECSKVMEIIQVLLASPKVQVSTGDIAVICAFRMQVLKLRKLLRDNNLGIVNVGQVEDFQGGEQKIVIISTTLSKRHRVEKEGKIGFLGDPKKFNVALTRAQALAVVVGNPNLLAGEEYWKELLMFCKENDAIRGCACPALEVGGREDEASLVDAVLQQSLLGGGGMDLMYPEHGDFYDQDDLQWRVML 941
BLAST of mRNA_E-siliculosus-1a_F_contig1485.2827.1 vs. uniprot
Match: D7FRN2_ECTSI (RNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRN2_ECTSI) HSP 1 Score: 1433 bits (3710), Expect = 0.000e+0 Identity = 753/846 (89.01%), Postives = 759/846 (89.72%), Query Frame = 1
Query: 1 RLLAQAVDGLAAAVLNAEARRFLPAAHREWFKYPVKGVVATPRANNPFYLPRLRSLDVLEFEVPEAVQKRFLQGAESRVPWLVRDHREIMALAGVEVGPGRLDDYVARYSALMWLEESQMSWDVHQYDLHDVRVTLDSSRYREGDPSTNIVGRVKVPGVLESRPRLAIGDVVRLRPPAQAKAGAKKGSEANGQHRNGGVGGVVSADGTDGSHQKLGNAPDFEVQALVSNVSLSQGVVTLLLPHPGSLTAASSSTPGSELYAKAIATAVKAARASKQAXXXXXXXXXXXXEAAMDGWHCRFQLERHGLQFIHYALNRLVMFGDSVSGSSPLRYLFPEPEMLPETPLWPLPESSFEWVMPSTNDSQRTAVRDIVTGAHGQVPYIIFGPPGTGKTCTVIESILQLVKLRPECRILAAGPSDTSADVICERLSRHMSREQLVRINWWQRLTAGVHPNILSYCPQDSNHGMFVPPSTITHQVVVCTCGTAGMLSVLGVDENYFTHIFVDESSNAMETELLVPLSYAGRAQIILCGDPRQLGAAVRSPAARALGLEVSLQERLMEQEMYSKHVQAPTALSSATSNGAADVRCMTQLLNNYRAHEVLLTLPSAMFYGGSLVRSAERSQTDSMLAWEELPETKAFPLLFYGIQGKDLSPLDSPSFYNPIECSKVMEIIQVLLASPKVQVSAGDIAVICAFRMQVLKLRKLLRDNNLGIVNVGQVEDFQGGEKKIVIISTTLSKRHRVEKEGKIGFLGDPKKFNVALTRAQALAVVVGNPNLLAGEEYWKELLMFCKENDAIRGCACPALEVGGREDEASLVDAVLQQSLLGGGGMDLMYPEHGDFYDQDDLQWR 2538
RLLAQAVDG AAAVL+AEARRFLPAAHREWFK PVKGVVATPRANNPFYLPRLRSLDVLEFEVPEAVQKRFLQGAESRVPWLVRDHREIMALAGVEVGPGRLDDYVARYSALMWLEESQMSWDVHQYDLHDVRVTLDSSRYREGDPSTNIVGRV+VPGVLESRPRLA+GDVVRLRPPAQAKAGAKK S+ANGQH NGGVG VVSADGTDGSHQKLGNAPDFEVQ GSELYAK IA AVKAARAS QA XXXXXXX EAAMDGWHCRFQLERHGLQ PLPESSFEWVMPSTNDSQRTAVRDIVTGAHGQVPYIIFGPPGTGKTCTVIESILQLVKLRPECRILA GPSDTSADVICERLSRHMSR+QLVRINWWQRLTAGVHPNILSYCPQDSN GMFVPPSTITHQVVVCTCGTAGMLSVLGVDENYFTHIFVDESSNAMETELLVPLSYAGRAQIILCGDPRQLGAAVRSPAARALGLEVSLQERLMEQEMYSKH QAPTALSSATSNGAADVRCMTQLLNNYRAHEVLLTLPSAMFYGGSLVRSAERSQTDSML WEELPETKAFPLLFYGIQGKDLSPLDSPSFYNPIECSKVMEIIQVLLASPKVQVS GDIAVICAFRMQVL+LRKLLRDNNLGIVNVGQVEDFQGGEKKIVIISTTLSKRHRVEKEGKIGFLGDPKKFNVALTRAQALAVVVGNPNLLAGEEYWKELLMFCKENDAIRGCACPALEVGGREDEASLVDAVLQQSLLGGGGMDLMYPEHGDFYDQDDLQWR
Sbjct: 465 RLLAQAVDGRAAAVLSAEARRFLPAAHREWFKNPVKGVVATPRANNPFYLPRLRSLDVLEFEVPEAVQKRFLQGAESRVPWLVRDHREIMALAGVEVGPGRLDDYVARYSALMWLEESQMSWDVHQYDLHDVRVTLDSSRYREGDPSTNIVGRVEVPGVLESRPRLAMGDVVRLRPPAQAKAGAKKVSKANGQHWNGGVGDVVSADGTDGSHQKLGNAPDFEVQ-------------------------------GSELYAKTIARAVKAARASVQAAGXXXXXXXKE-EAAMDGWHCRFQLERHGLQ--------------------------------------PLPESSFEWVMPSTNDSQRTAVRDIVTGAHGQVPYIIFGPPGTGKTCTVIESILQLVKLRPECRILAVGPSDTSADVICERLSRHMSRDQLVRINWWQRLTAGVHPNILSYCPQDSNRGMFVPPSTITHQVVVCTCGTAGMLSVLGVDENYFTHIFVDESSNAMETELLVPLSYAGRAQIILCGDPRQLGAAVRSPAARALGLEVSLQERLMEQEMYSKHAQAPTALSSATSNGAADVRCMTQLLNNYRAHEVLLTLPSAMFYGGSLVRSAERSQTDSMLTWEELPETKAFPLLFYGIQGKDLSPLDSPSFYNPIECSKVMEIIQVLLASPKVQVSTGDIAVICAFRMQVLRLRKLLRDNNLGIVNVGQVEDFQGGEKKIVIISTTLSKRHRVEKEGKIGFLGDPKKFNVALTRAQALAVVVGNPNLLAGEEYWKELLMFCKENDAIRGCACPALEVGGREDEASLVDAVLQQSLLGGGGMDLMYPEHGDFYDQDDLQWR 1240
BLAST of mRNA_E-siliculosus-1a_F_contig1485.2827.1 vs. uniprot
Match: A0A4D9D490_9STRA (RNA helicase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D490_9STRA) HSP 1 Score: 490 bits (1261), Expect = 5.810e-152 Identity = 335/927 (36.14%), Postives = 478/927 (51.56%), Query Frame = 1
Query: 1 RLLAQAVDGLAAAVLNAEARRFLPAAHREWFKYPVKGVVATPRANNPF----------YLPRLRSLDVLEFEVPEAVQKRFLQGAESRVPWLVRDHREIMALAGVEVGPGRLDDYVARYSALMWLEESQMSWDVHQYDLHDVRVTLDSSRYREGD---PSTNIVGRVKVPGVLESRPRLAIGDVVRLRPPAQAKAGAKKGSEANGQHRNGGVGGVVSADGTDGSHQKLGNAPDFEVQALVSNVSLSQGVVTLLLP--HPGSLTAASSSTPGSELYAKAIATAVKAARASKQAXXXXXXXXXXXXEAAMDGWHCRFQLERHGLQFIHYALNRLVMFGDSVSGSSPLRYLFPEPEMLPE---------------TPLWPLPESSFEWVMPSTNDSQRTAVRDIVTGAHGQVPYIIFGPPGTGKTCTVIESILQLVKLRPECRILAAGPSDTSADVICERLSRHMSREQLVRINWWQRLTAGVHPNILSYCPQDSNHGMFV-----PPSTITHQVVVCTCGTAGMLSVLGVDENY---FTHIFVDESSNAMETELLVPLSYAGR-AQIILCGDPRQLGAAVRSPAARALGLEVSLQERLMEQ-EMYSKHVQAPTALSSATSNGAADV----------------RCMTQLLNNYRAHEVLLTLPSAMFYGGSLVRSAERSQTDSMLAWEELPET---------------------KAFPLLFYGIQGKDLSPLDSPSFYNPIECSKVMEIIQVLLASPKVQVSAGDIAVICAFRMQVLKLRKLLRDNNLGIVNVGQVEDFQGGEKKIVIISTTLSKRHRVEKEGKIGFLGDPKKFNVALTRAQALAVVVGNPNLLAGEEY-WKELLMFCKENDAIRGCACPALEVGGREDEASLVDAVLQQSLLGGGGMDLMYPEHGDFYDQDDLQWRVML 2547
+++A D A A+LN EAR F+P R +F P +V+ P +PF YLP ++ +P+ +++ FL +++ + + +L G+ P + +Y A+++LEE+Q DV +YDL V +T YRE P+ +V + VPG E RP LA GD VRLRP + G+ G E++A+V + + V +LLP P S+ + S +H RF +R+G +F+H AL S +P R +FP PE + E++ +WV N+ QR AV DIV HG +PYI++GPPGTGKT TVIE+ILQ+ + P ++LA PSD +AD++ ERLS HM +QL R+NW QRL A + P++L Y D+ +F P S + HQV+V TC ++G+LS+L + F+HI VDE+S A++ E++VPLS AG ++L GDP+QLGA R+P + LGL SLQERLME +Y + A +SAT G RC+T L NYR+H+ ++ +PS MFY +L + ++S DSMLAWE LP + K FP+LF+G G+ + LDSPSF+N +EC KV++++ LL+S +VQV DIA+I AFR QVLKLR LLR+ G +N+GQVEDFQG E K+VIIST LS RH E ++GFLG PK+FNVA+TRAQAL V+VGNP L + W++LL FCK++ A+RG + P L E SL+D + +SLLG + +YP + Y D WR++L
Sbjct: 230 KVVASVADRAAQALLNVEARAFVPQGLRRYFDEPCN-MVSHPDEPSPFQPVGMANVLRYLP--------DYFLPDDIRRAFLGFKAAKLS----ERSDPYSLFGIVKSPTTVLEYCRNMRAMLYLEEAQAGEDVRRYDLFGVPIT-----YREKSKDKPNAPLVATISVPGAAEKRPPLAYGDCVRLRPSSLPAIGS-------------------------------GRRVMVEMRAVV--LETREEKVKILLPPKFPTSMFPSDSR------------------------------------------FHIRFTYDRYGFRFLHRALY-------CFSTPAPARRIFPNFFFPPEGGGPEGEENEERGRKIRAVAVDEAAIQWVNRVINEEQRRAVLDIVNQTHGSLPYILYGPPGTGKTLTVIEAILQICRHHPRSKVLAVAPSDVAADILAERLSEHMEPKQLFRLNWCQRLMASMKPSLLRYSCWDAKVSLFSLPDDEPRSILEHQVIVSTCASSGLLSLLDISGQTPVSFSHILVDEASQALQPEVMVPLSLAGPDTGVVLAGDPKQLGAVTRNPLVQELGLARSLQERLMETCSIYRTQLAAE---ASATEGGVEHPKGSEHRTSAPKEGDPGRCLTMLRKNYRSHQAIIEVPSRMFYDRTLEQHGDKSVIDSMLAWEMLPGSSSATALDTAPLRSTARAQAGPKGFPILFWGCLGEHMHELDSPSFFNVVECGKVLDLVHALLSSTRVQVRMQDIAIISAFRKQVLKLRSLLREKGYGAINIGQVEDFQGQETKVVIISTVLSARHPNEISEQLGFLGHPKRFNVAITRAQALTVIVGNPYALWEDVGGWRQLLEFCKDHGALRGSSGP-LGTPDVESVESLLDTIANESLLGKASSNDIYPTSLEDYFSDS-PWRLLL 1051
BLAST of mRNA_E-siliculosus-1a_F_contig1485.2827.1 vs. uniprot
Match: A0A835YTD6_9STRA (RNA helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTD6_9STRA) HSP 1 Score: 499 bits (1286), Expect = 1.710e-150 Identity = 349/868 (40.21%), Postives = 464/868 (53.46%), Query Frame = 1
Query: 277 AGVEVGPGRLDD------YVARYSALMWLEESQMSWDVHQYDLHDVRVTLDSSRYREGDPSTNIVGRVKVPGVLESRPRLAIGDVVRLRPPAQAKAGAKKGSEANGQHRNG---GVGGVVSADGTDGSHQKLGNAPDF-EVQALVSNVSLSQGVVTLLLPHPGSLTAASSSTPGSELYAKAIATA-----------------------------VKAARASKQAXXXXXXXXXXXXEAAMDGWHCRFQLERHGLQFIHYALNRLVMFGDSVSGSSPLRYLFPEPEMLPETPLWPLPESSFEWVMPSTNDSQRTAVRDIVTGAHGQVPYIIFGPPGTGKTCTVIESILQLVKLRPECRILAAGPSDTSADVICERLSRHMSREQLVRINWWQRLTAGVHPNILSYCPQDSNHGMFVPPST--ITHQVVVCTCGTAGMLSVLGVDENY-----------------------FTHIFVDESSNA-----------METELLVPLSYAGR-AQIILCGDPRQLGAAVRSPAARALGLEVSLQERLMEQEMYSKHVQAPTALSSATSNGAADVRCMTQLLNNYRAHEVLLTLPSAMFYGGSLVRSAERSQTDSMLAWEELPETKA--------------------FPLLFYGIQGKDLSPLDSPSFYNPIECSKVMEIIQVLLASPKVQVSAGDIAVICAFRMQVL----------KLRKLLRDNNLGIVNVGQVEDFQGGEKKIVIISTTLSKRHRVEKEGKIGFLGDPKKFNVALTRAQALAVVVGNPNLLAGEEYWKELLMFCKENDAIRGCACPALEVGGREDEASL--VDAVLQ--QSLLGGGGMDLMYPEHGD-FYDQDDLQWRVML 2547
A V GPG D ++ R L+W+EE QM D+ YD+H VR L +V + V G +E RPRLAIGD VRLR K G +G+ G G +G V + S G A E A+VS+V L G+V +++P + A ++ P L A A A + R ++ XXXXXXXXXXXXE A WH RF R GLQF+H AL ++ S+ RYLFP+ MLP L W+ TN+ QR AV DIVT AH +PYIIFGPPGTGKT T+ E+ LQ++ + R+L PSD +ADV+ RL+ H++ +Q++R+ WWQR T + ++L YC D + P+ ++QV+V TCG AG +++L + FTHIF DESS A +E ELLVPL+ A IIL GDPRQLGA VRSP A LGL SLQERLM +Y + A S +RC +QL +NYR+H VLL +PS +FY G+LV A++ +S+ WE LP FPL YGIQG+D+ LDSPSFYNP+ECSK++++++ LL+S +V V+ GDI +I AFRMQV+ +LRK LR N LG VNVGQ+ I IIST LS+RHR+E EG++GFLGDPK+FNVALTRA AL ++VG+P+LL E YW+++L +C+ + A RGC C A+ G A++ DA L+ +S+LG G ++ MYP D FY DD QWRV+L
Sbjct: 792 AAVTQGPGSGDQSGVVQRHIDRLRRLLWIEECQMRRDIESYDMHGVRPRLKMH-------GELMVASILVKGAMEHRPRLAIGDEVRLRVSNVGK-GPARGAAVEGDFLQGEAVALGCRVVQTNLNMSMLLDGEAVVVGEAVAVVSSVRLKDGLVKMVMPPESTAVAVAAHAPPGLLPATLNARARRNFQRIVAAHLPPAAPRGVPPPPPRKAPQRKTRVAQXXXXXXXXXXXXXXEDAPPRWHVRFGFSRLGLQFMHAALQ------GAMRSSAAQRYLFPDMAMLPPLTGKQLSPPRVAWINARTNELQRKAVVDIVTRAHAPLPYIIFGPPGTGKTMTMTEAALQVLIHTRDARVLVCAPSDAAADVVARRLAPHLTPQQMLRLCWWQRPTESLPSSLLQYCCIDPTVSLLALPTEPLSSYQVIVTTCGAAGQIAMLSELQQQRSDSSEHEAWWPIAAALPQQRPRFTHIFCDESSQAKGADLRVRKEALEAELLVPLALASDDTSIILAGDPRQLGATVRSPLAARLGLGTSLQERLMALPLYGAEDGGEDMETLAAS-----MRCYSQLTSNYRSHRVLLEVPSRLFYRGTLVERADKQLVESLCEWEGLPPVVRQRQEGQDGEEGGEEGGGPAHFPLFMYGIQGQDMHELDSPSFYNPVECSKIVDLVKSLLSSTRVSVTTGDIGIIAAFRMQVIHRNVQAGLVIQLRKALRLNGLGSVNVGQIATISTAA-LIAIISTVLSRRHRLETEGRLGFLGDPKRFNVALTRAMALVIIVGSPDLLLTERYWEQVLAYCRAHGAYRGCECAAMGTDGSGGSAAIDVADAALRLCRSVLGAGLVEDMYPTDIDSFYGGDDAQWRVVL 1639
BLAST of mRNA_E-siliculosus-1a_F_contig1485.2827.1 vs. uniprot
Match: A0A7S2F4L8_9STRA (RNA helicase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F4L8_9STRA) HSP 1 Score: 379 bits (974), Expect = 6.080e-114 Identity = 227/525 (43.24%), Postives = 312/525 (59.43%), Query Frame = 1
Query: 1081 NDSQRTAVRDIVTGAHGQVPYIIFGPPGTGKTCTVIESILQLVKL-----------------------RPECRILAAGPSDTSADVICERLSRHMSREQLVRINWWQRLTAGVHPNILSYCPQDSNHGMFVPPST---ITHQVVVCTCGTAGMLSVLGVDENYFTHIFVDESSNAMETELLVPLSYAGR-AQIILCGDPRQLGAAVRSPAARALGLEVSLQERLMEQEMYSKHVQAPTALSSATSNGAADVRCMTQLLNNYRAHEVLLTLPSAMFYGGSLVRSAERSQTDSMLAWEELPETKAFPLLFYGIQGKDLSPLDSPSFYNPIECSKVMEIIQVLLASPKVQVSAGDIAVICAFRMQVLKLRKLLRDNNLGIVNVGQVEDFQGGEKKIVIISTTLSK-RHRVEKEGKIGFLGDPKKFNVALTRAQALAVVVGNPNLLAGEEYWKELLMFCKENDAIRGCACPALEVG----GREDEASLVDAVLQQ----SLLGGGGMDLMYPEHGDFYDQDDLQWRVML 2547
N Q AV I+ G IFGPPGTGKT T++E+ L ++K + +CR+L PSD +ADV+C RL++ +S ++L R+ WWQ A V P++L+Y G+ P T VVV TC +G+L +LG F+HI VDES A+E E+L+PLS A ++LCGDPRQLGA+VRSP AR LGL S+QERLM + + + S A SN + L NYR+H L+ LPS +FY G L A S T S+L W+ L + FPL+F G+ G+D++ LDSPSF N +E ++V+ +++ L+ S KV+V+ DI VI FR QVL +R++LR LG VNVGQVEDFQG E ++++IST LS+ R + KEG IG L DP++FNV +TRAQAL +VVGNP +L + +W+ LL C +ND+ GCACP L VG G + + DA+L+Q LLGGG ++ +YP+ D+ WRVML
Sbjct: 215 NTMQLHAVDRILHLPAGAPILTIFGPPGTGKTMTLVEAALAILKRDADEKVAYYRMHRANSRLGVWVNKSKCRLLITAPSDAAADVLCLRLAKSLSPKELFRMYWWQAKLAQVPPSLLAYTGTTEGGGILSPVKARPDSTFSVVVTTCAGSGLLKILGWKRGDFSHIIVDESCQAVEPEVLIPLSLADNDTAMVLCGDPRQLGASVRSPIARELGLGRSMQERLMSLKQHG----GTSGSSYADSN-------VIMLEANYRSHPDLIKLPSELFYDGRLEVHAHESLTHSLLRWDML--RRKFPLVFKGVLGQDMAALDSPSFCNAVEANEVVNLVKRLIESEKVKVTTSDIGVIAGFRQQVLTIREVLRGCGLGAVNVGQVEDFQGQECRVIVISTVLSRYRSLLVKEG-IGLLHDPQRFNVCVTRAQALTIVVGNPFVLLQDPHWRALLCHCIDNDSYHGCACPELGVGRDGLGLSSDGTDSDALLEQISHMMLLGGGDVETVYPQDIAASYVDERSWRVML 725
BLAST of mRNA_E-siliculosus-1a_F_contig1485.2827.1 vs. uniprot
Match: A7RTX4_NEMVE (RNA helicase (Fragment) n=3 Tax=Nematostella vectensis TaxID=45351 RepID=A7RTX4_NEMVE) HSP 1 Score: 327 bits (837), Expect = 1.130e-97 Identity = 184/445 (41.35%), Postives = 268/445 (60.22%), Query Frame = 1
Query: 1081 NDSQRTAVRDIVTGAHGQVPYIIFGPPGTGKTCTVIESILQLVKLRPECRILAAGPSDTSADVICERLSRH--MSREQLVRINWWQRLTAGVHPNILSYCPQDSNHGMFVPPSTITHQVVVCTCGTAGMLSVLGVDENYFTHIFVDESSNAMETELLVPLSYAGR--AQIILCGDPRQLGAAVRSPAARALGLEVSLQERLMEQEMYSKHVQAPTALSSATSNGAADVRCMTQLLNNYRAHEVLLTLPSAMFYGGSLVRSAERSQTDSMLAWEELPETKAFPLLFYGIQGKDLSPLDSPSFYNPIECSKVMEIIQVLLASPKVQVSAGDIAVICAFRMQVLKLRKLLRDNNLGIVNVGQVEDFQGGEKKIVIISTTLSKRHRV--EKEGKIGFLGDPKKFNVALTRAQALAVVVGNPNLLAGEEYWKELLMFCKENDAIRGCACP 2397
N+ QR AV I++G PY++FGPPGTGKT T++E+ILQ+ P R++A PS+++AD++ RL R + ++R+N +QR+ + +I YC + + ++++VCTC TAG L LG+ +FTH+FVDE+ A E E L+P+ A QIIL GDP QLG +RSP A + GL VSL ERLM +Y++ + +G D +T+L+NNYR+H LL LPSA+FY L AER+ + + WE LP T+ PL+F+G++G+D+ +SPS++NP+E +V+ +Q L S + D+ +I ++ QV K+R LL + V VG VE+FQG E+ +IIST S V + IGFL +PK+FNVA+TRAQ+L VVVGNP++L + YW LL +C DA GC P
Sbjct: 17 NERQRAAVARILSGQSRPTPYLLFGPPGTGKTVTLVEAILQVFHRVPSSRVIACAPSNSAADLMAVRLHRSGFIQEGDMIRLNAFQRVQE-IPESINKYCVDTDSLQL-----AAHYRIIVCTCSTAGQLFSLGLKPGHFTHVFVDEAGQATEPECLIPIGLAAGEDGQIILAGDPFQLGPVLRSPVAISYGLNVSLLERLMSGLLYARDE------TRFVDHGCYDPLLVTKLVNNYRSHPSLLRLPSALFYHSELRVCAERTMREQLSQWEMLP-TQGTPLVFHGLKGEDMREGNSPSWFNPVEAVQVVRYVQALKNSATCPIKLADLGIITPYKKQVEKIRLLLSRVGIDEVKVGSVEEFQGQERPAIIISTVRSTEAMVGFDVAHTIGFLDNPKRFNVAVTRAQSLLVVVGNPHVLCRDPYWCSLLQYCVMVDAYTGCDLP 448
BLAST of mRNA_E-siliculosus-1a_F_contig1485.2827.1 vs. uniprot
Match: UPI00077AC0BA (putative helicase Mov10l1 n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077AC0BA) HSP 1 Score: 338 bits (866), Expect = 6.970e-97 Identity = 193/471 (40.98%), Postives = 288/471 (61.15%), Query Frame = 1
Query: 1075 STNDSQRTAVRDIVTGAHGQVPYIIFGPPGTGKTCTVIESILQLVKLRPECRILAAGPSDTSADVICERLSRH--MSREQLVRINWWQRLTAGVHPNILSYCPQDSNHGMFVPPSTITH-QVVVCTCGTAGMLSVLGVDENYFTHIFVDESSNAMETELLVPLSYAGR--AQIILCGDPRQLGAAVRSPAARALGLEVSLQERLMEQEMYSKHVQAPTALSSATSNGAADVRCMTQLLNNYRAHEVLLTLPSAMFYGGSLVRSAERSQTDSMLAWEELPETKAFPLLFYGIQGKDLSPLDSPSFYNPIECSKVMEIIQVLLASPKVQVSAGDIAVICAFRMQVLKLRKLLRDNNLGIVNVGQVEDFQGGEKKIVIISTTLSKRHRVEKEGK--IGFLGDPKKFNVALTRAQALAVVVGNPNLLAGEEYWKELLMFCKENDAIRGCACPALEVGGREDEASLVDAVLQQSLL 2466
S N+ QR AV IV+G PY++FGPPGTGKT TV+E+ILQ+ + P R+LA PS+++AD+I ERL R + +VR+N QR+ + +I YC D++H T H ++++ TC TAG L LG+ + TH+FVDE+ A E E LV + A Q+IL GDP QLG ++S A + GL +SL ERL+ + +Y ++ + + +G D +T+L+NNYR+H +L LPSA+FY LV A +S+ WE+LP+ K FP++F+G+QG+D+ +SPS++NP+E +V++ +Q L +S K+ + D+ +I +R QV K R LL L V VG VE+FQG E+ ++IIST S V + + IGFL +PK+FNVA+TRAQAL +V+GNP++L + YW L+ +C ND+ GC P+L+ ++E +L LL
Sbjct: 302 SLNERQRAAVCRIVSGQCRPSPYLLFGPPGTGKTITVVEAILQIFRKIPSSRVLACAPSNSAADLIAERLHRSGFVLEGDMVRLNAIQRVQ-DIPESIARYCT-DTDH-----LDTAAHYRIIISTCSTAGQLYSLGLRAGHITHVFVDEAGQATEPECLVAVGLAAGDDGQVILAGDPFQLGPVLQSRVASSFGLNISLLERLINRPLYCRNE------AKFSDHGCYDPLLVTKLVNNYRSHPAVLKLPSAVFYHDELVPCANECMRESLCHWEKLPK-KGFPVVFHGVQGEDVREGNSPSWFNPVEAVQVVKYLQALKSSDKLSIKLSDVGIITPYRKQVEKTRLLLASVGLDEVKVGSVEEFQGQERLVIIISTVRSNASLVGSDVRHTIGFLSNPKRFNVAITRAQALLIVIGNPHVLCQDPYWCCLVQYCVVNDSYIGCDLPSLDQHFVKEEFQAATNLLSNILL 758
BLAST of mRNA_E-siliculosus-1a_F_contig1485.2827.1 vs. uniprot
Match: F0Y311_AURAN (RNA helicase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y311_AURAN) HSP 1 Score: 323 bits (829), Expect = 4.040e-96 Identity = 204/505 (40.40%), Postives = 275/505 (54.46%), Query Frame = 1
Query: 1072 PSTNDSQRTAVRDIV---TGAHGQVPYIIFGPPGTGKTCTVIESILQLVKLRPECRILAAGPSDTSADVICERLSRHMSREQLVRINWWQRLTAGVHPNILSYCPQDSNHGMFVPPSTITHQVVVCTCGTAGMLSVLGVDENYFTHIFVDESSNAMETELLVPLSYAGRA-QIILCGDPRQLGAAVRSPAARALGLEVSLQERLMEQEMYSKHVQAPTALSSATSNGAADVRCMTQLLNNYRAHEVLLTLPSAMFYGGSLVRSAERSQTDSMLAWEELPETKAFPLLFYGIQGKDLSPLDSPSFYNPIECSKVMEIIQVLLASPKVQVSAGDIAVICAFRMQVLKLRKLLRDNNLGIVNVGQVEDFQGGEKKIVIISTTLSKRHR-----VEKEGKIGFLGDPKKFNVALTRAQALAVVVGNPNLLAGEEYWKELLMFCKENDAIRGCACPALEVG----GREDEASLVDAVLQQSLLGGGGMDLMYPEHGDFYDQDDLQWRVML 2547
P N QR A I T G P ++FGPPGTGKT TV+E I +LV P R+LA PSD +AD++ RL+ + +VV TCG AG+L G+ FTHI +DE++ A+E E LVPL+ G A +++L GDP QLGAAVRSP A + GL SL ERL+++ +A AA V +L +NYRAH LL LPS +FY GSL A+ + T S+L WE+ LL +G+ G LDSPS++N +EC+KV ++++ LLAS +V GDI V+CAFR Q LKLR LLR LG V+VGQ+ DFQG EKK VI++T LS+ R + +G L D ++FNVA+TRA+AL VVVG+P LL YWK+LL C ++ + RG L G G +D +VD + ++SLLG G +D +YP + WR++L
Sbjct: 39 PPLNAPQRLAAEAIAGRGTWRRGGPPLVVFGPPGTGKTATVVEGIRRLVASDPGARVLACAPSDEAADLLARRLAA---------------------------------------AEVAKYAIVVATCGAAGLLLCGGL-RGTFTHILIDEAAQALEAEALVPLATCGPATRVVLAGDPNQLGAAVRSPFAASKGLGTSLLERLIQR--------------AAKDPAAAQV---VRLSDNYRAHGSLLALPSKLFYDGSLRAKADEAVTASLLGWEKTA------LLCWGVNGSAAHELDSPSYFNALECAKVAQLVESLLASDRVACDVGDIGVLCAFRKQSLKLRLLLRQRGLGAVSVGQIYDFQGSEKKCVIVTTVLSELPRFAEGELSDHAPVGLL-DARRFNVAVTRARALCVVVGHPGLLGAAAYWKDLLEHCIDSGSYRGVRPEDLLDGADACGDDDARHVVDLIAEKSLLGQGDVDRLYPRDAAALYVAEASWRIVL 479
BLAST of mRNA_E-siliculosus-1a_F_contig1485.2827.1 vs. uniprot
Match: A0A7S3VA28_9STRA (RNA helicase n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VA28_9STRA) HSP 1 Score: 338 bits (867), Expect = 6.950e-96 Identity = 252/765 (32.94%), Postives = 381/765 (49.80%), Query Frame = 1
Query: 358 MSWDVHQYDLHDVRVTLDSSRYREGDPSTNIVGR----VKVPGVLESRPRLAIGDVVRLRPPAQAKAGAKKGSEANGQHRNGGVGGVVSADGTDGSHQKLGNAPDFEVQALVSNVSLSQGVVTLLLPHPGS----LTAASSSTPGSELYAKAIATAVKAARASKQAXXXXXXXXXXXXEAAMDGWHCRFQLER--HGL--QFIHYALNR-LVMFGDSVSGSSPLRYLFPEPEMLPETPLWPLPESSFEWVMPSTNDSQRTAVRDIVTGAHGQVPYIIFGPPGTGKTCTVIESILQLVKLRPECRILAAGPSDTSADVICERLSRHM----------SREQLVRINWWQRLTAGVHPNILSYCPQDSNHGMFVPPST---ITHQVVVCTCGTAGMLSVLGVDENYFT----HIFVDESSNAMETELLVPLSYAGR-AQIILCGDPRQLGAAVRSPAARALGLEVSLQERLMEQEMYSKHVQAPTALSSATSNGAADVRCMTQLLNNYRAHEVLLTLPSAMFYGGSLVRSAERSQTDSMLAWEELPETKAFPLLFYGIQGKDLSPLDSPSFYNPIECSKVMEIIQVLLASPKVQVSAGDIAVICAFRMQVLKLRKLLRDNNLGIVNVGQVEDFQGGEKKIVIISTTLSK---RHRVEKEGKIGFLGDPKKFNVALTRAQALAVVVGNPNLLA-GEEYWKELLMFCKENDAIRGCACPALEVGGREDEASLVDAVLQQSLLGGGGMDLMYPEHGDFYDQDDLQWRVML 2547
+ +D Q ++ + + L S PS+++ R + VPGV E+RP ++IGD+VRLR + EV VS V + + + L LP P S L A P +E Y + KQ XXXXX A + RF HG+ ++YA ++ + ++ S +R + + + +T + W+ + N Q+TAV+DI+ H PYII+GPPGTGKT + E+I Q+++ R+L PSD + D+I RL M + +++R+NW+ R + + P +LS C + G F P ++ Q ++C C AGML + DEN + ++FVDES + E E+L PL GR I+L GDP+QLG VRS +A GL +SLQERLM +Y +++ +D +T+L++NYR+H LL +PS +FY G+L T + +E LP + FPL+ Y ++G ++S +D+PSFYN EC+ V+ II LL+SP +++ +G+IAVI FR QVL +R++LR N LG +NVG VEDFQG E +VIIST L+K R + +G +GF+ DP++FNVALTRA +L V+VGN + L YW L+ + N I G + + + + + +LLG G Y Y QD +W+V L
Sbjct: 340 LQFDCLQRNIEKLTLALPSXXXXXHAPSSSVGSRFIAYISVPGVAENRPAVSIGDLVRLR-----------------------------------------FVDELEVVGEVSAVDIQKERIMLFLPLPNSEGKYLNAMMH--PKNEAYVR-----------QKQGSXXXXXSSGMNRPADFARFDVRFATSSRAHGVFKLAMNYAFSKSMEQIKRIIAPSLFIRGIKKKHQRSSQT------DFDCAWLQ-NLNTQQKTAVQDILDSNHSSAPYIIYGPPGTGKTMVICEAIAQILQQHAHKRVLVCAPSDAACDIIATRLLTLMHTSSNKMPSLGQRKIMRVNWFSRNPSSLPP-VLSTCTPIDDSGFFKLPDKGDLVSVQCIICRCFVAGMLDI-NADENPWIDNVDYVFVDESCQSYEFEVLTPLLKVGRNCSIVLTGDPKQLGPTVRSISAGRSGLSLSLQERLMGLRLYQSEIES------------SDWCVITRLVDNYRSHIALLRVPSQLFYDGTLRYKGCDKLTGACQNFEMLPNGRTFPLMMYNVEGTEMSKIDTPSFYNKQECNAVLRIINALLSSPNIKIHSGEIAVITCFRAQVLCMRQILRQNGLGSINVGVVEDFQGQETSVVIISTVLTKNQDRWKSGPKGGLGFMTDPRRFNVALTRASSLCVIVGNSSFLEISGSYWTALIEHIRRNSGISGEYSSSRKQNFDDGIFDFIQQLENLNLLGKGHELDRYEMAMQGYYQDSPEWKVCL 1029
BLAST of mRNA_E-siliculosus-1a_F_contig1485.2827.1 vs. uniprot
Match: A7SP82_NEMVE (RNA helicase n=2 Tax=Nematostella vectensis TaxID=45351 RepID=A7SP82_NEMVE) HSP 1 Score: 325 bits (834), Expect = 7.940e-96 Identity = 183/448 (40.85%), Postives = 274/448 (61.16%), Query Frame = 1
Query: 1081 NDSQRTAVRDIVTGAHGQVPYIIFGPPGTGKTCTVIESILQLVKLRPECRILAAGPSDTSADVICERLSRH--MSREQLVRINWWQRLTAGVHPNI-LSYCPQDSNHGMFVPPSTITHQVVVCTCGTAGMLSVLGVDENYFTHIFVDESSNAMETELLVPLS------YAGRAQIILCGDPRQLGAAVRSPAARALGLEVSLQERLMEQ-EMYSKHVQAPTALSSATSNGAADVRCMTQLLNNYRAHEVLLTLPSAMFYGGSLVRSAERSQTDSMLAWEELPETKAFPLLFYGIQGKDLSPLDSPSFYNPIECSKVMEIIQVLLASPKVQVSAGDIAVICAFRMQVLKLRKLLRDNNLGIVNVGQVEDFQGGEKKIVIISTTLSKRH--RVEKEGKIGFLGDPKKFNVALTRAQALAVVVGNPNLLAGEEYWKELLMFCKENDAIRGC 2388
N QR AV IV G PY+IFGPPGTGKT TV+ESI Q++ + P ++LA PS+++AD+I ER+ +H + + +++R+N + R A + +I + C D + + ++VVCT TAG L + + +FTH+F+DES A+E E +VPL+ G Q++L GDP+QLG +RSP A GL +SL ERLM + Y + + G + +T+LL NYR+H +L LP+ MFY L A++ + +S+ W +LP TK FP+LF G+ GKDL SPSF+NP E + V++ I+ L S V+V +I VI +R QV K+R+LL NN+ + VG VE+FQG E++++IIST S + +++ + K+GFL + K+FNVA+TRAQAL +VVGNP++L + +W + +C +N RGC
Sbjct: 65 NQEQRQAVVSIVKGTSRPHPYLIFGPPGTGKTITVVESIKQVLHVFPNSKVLACAPSNSAADLILERVMKHNVIPKMKMLRLNAFGRSYASLSDSIKVVSCIHDGDFFFPGKEEIMNKRLVVCTLVTAGRLVSADIPDTHFTHVFIDESGQALEPECMVPLAGLLNPENPGGGQLVLAGDPQQLGPVLRSPLAIKYGLRMSLLERLMTRVAAYGRITE-----DEEDELGEYEPAMLTKLLKNYRSHPAILELPNGMFYDDELETCADKLKRESLCNWSKLP-TKGFPILFDGVLGKDLREGKSPSFFNPEEAATVVKHIKDLRDSRGVRVLMAEIGVISPYRQQVSKIRQLLHKNNITGIKVGSVEEFQGDERRVIIISTVRSSQEFLKMDAQFKLGFLNNRKRFNVAITRAQALLIVVGNPHVLCKDSHWGRFIHYCVKNKGYRGC 506 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1485.2827.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1485.2827.1 >prot_E-siliculosus-1a_F_contig1485.2827.1 ID=prot_E-siliculosus-1a_F_contig1485.2827.1|Name=mRNA_E-siliculosus-1a_F_contig1485.2827.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=761bp MALAGVEVGPGRLDDYVARYSALMWLEESQMSWDVHQYDLHDVRVTLDSSback to top mRNA from alignment at E-siliculosus-1a_F_contig1485:479..16820+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1485.2827.1 ID=mRNA_E-siliculosus-1a_F_contig1485.2827.1|Name=mRNA_E-siliculosus-1a_F_contig1485.2827.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=16342bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1485:479..16820+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1485:479..16820+ >mRNA_E-siliculosus-1a_F_contig1485.2827.1 ID=mRNA_E-siliculosus-1a_F_contig1485.2827.1|Name=mRNA_E-siliculosus-1a_F_contig1485.2827.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=4566bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1485:479..16820+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |