mRNA_E-siliculosus-1a_F_contig14845.2826.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig14845.2826.1 vs. uniprot
Match: A0A0E9NCQ7_SAICN (Uncharacterized protein n=1 Tax=Saitoella complicata (strain BCRC 22490 / CBS 7301 / JCM 7358 / NBRC 10748 / NRRL Y-17804) TaxID=698492 RepID=A0A0E9NCQ7_SAICN) HSP 1 Score: 103 bits (256), Expect = 8.160e-25 Identity = 63/115 (54.78%), Postives = 71/115 (61.74%), Query Frame = 1
Query: 22 PGSARCVQSFDDSLDSASRKTYRISLRSSSLWEPRHPSLKVLQPDSVAPGHLMKCKDID-------NIRTAFEASLPARIQCAPKPYEALFGNDPSAGSPTETLLRLHLPLNHEV 345
PGSA CVQ FDDSL+SA TYRISLRSSS+WEPR P LKVL L + +I R++ EASL C P + F NDPSAGSPTETLLRL LPLN +V
Sbjct: 127 PGSAMCVQRFDDSLNSAIHITYRISLRSSSMWEPRDPLLKVLFLLVALSSILFQTANIKLGLICGRRSRSSAEASLQVHKVCVYWPPKQHFNNDPSAGSPTETLLRLLLPLNDQV 241
BLAST of mRNA_E-siliculosus-1a_F_contig14845.2826.1 vs. uniprot
Match: A0A8J4QKS9_9ROSI (Uncharacterized protein n=1 Tax=Castanea mollissima TaxID=60419 RepID=A0A8J4QKS9_9ROSI) HSP 1 Score: 83.6 bits (205), Expect = 1.410e-18 Identity = 55/110 (50.00%), Postives = 63/110 (57.27%), Query Frame = 1
Query: 37 CVQSFDDSLDSASRKTYRISLRSSSLWEPRHPSLKVLQ----PDSVAPGHLMKCKDIDNIRTA---FEASLPARIQCAPKPYEALFGNDPSAGSPTETLLRLHLPLNHEV 345
CVQ FDDSL+SA TYRISLRSSS+ EPR P LKV+ +A + + C R + + R Q P A GNDPSAGSPTETLLRL LPLN V
Sbjct: 2 CVQRFDDSLNSAIHTTYRISLRSSSMPEPRDPLLKVVTIKFFQTLIATANGLNCPVGGRTRRGNVRYSKDMGKRWQAKP----ATLGNDPSAGSPTETLLRLLLPLNDRV 107
BLAST of mRNA_E-siliculosus-1a_F_contig14845.2826.1 vs. uniprot
Match: A0A401KYU3_ASPAW (Uncharacterized protein n=1 Tax=Aspergillus awamori TaxID=105351 RepID=A0A401KYU3_ASPAW) HSP 1 Score: 81.3 bits (199), Expect = 2.180e-16 Identity = 58/127 (45.67%), Postives = 66/127 (51.97%), Query Frame = 1
Query: 22 PGSARCVQSFDDSLDSASRKTYRISLRSSSLWEPRHPSLKVLQPDSVAPGHLMKCKDI----DNIRTAFEASLPARIQCAPKPYEAL---------------FGNDPSAGSPTETLLRLHLPLNHEV 345
PG A CVQ DDSL+SA +YRISLRSSS+ EPR P LKVL D + + + + T A P R + P EA GNDPSAGSPTETLLRL LPLN V
Sbjct: 116 PGGAMCVQRLDDSLNSAIHISYRISLRSSSMPEPRDPLLKVLT-DCIQSTQTARFQTVFVLGSPAGTGPGAEAPPRRPTSGGPAEATGYNRHGWEVGPKGPALGNDPSAGSPTETLLRLLLPLNDRV 241
BLAST of mRNA_E-siliculosus-1a_F_contig14845.2826.1 vs. uniprot
Match: X1WS06_ACYPI (Uncharacterized protein n=1 Tax=Acyrthosiphon pisum TaxID=7029 RepID=X1WS06_ACYPI) HSP 1 Score: 80.1 bits (196), Expect = 5.260e-16 Identity = 58/131 (44.27%), Postives = 66/131 (50.38%), Query Frame = 1
Query: 22 PGSARCVQSFDDSLDSASRKTYRISLRSSSLWEPRHPSLKVLQPDSVAPGHLMKCKDIDNIRTAFEASL----------PARIQCAPK-------------PYEALFGNDPSAGSPTETLLRLHLPLNHEV 345
P A CVQ DDSL+SA +YRISLRSSS+ EPR P LKVL +L C + ++TAF L P + P P GNDPSAGSPTETLLRL LPLN V
Sbjct: 111 PEGAMCVQRLDDSLNSAIHISYRISLRSSSMPEPRDPLLKVLT-------NLASCLRLQ-LQTAFRGGLRRARARGRMPPGGLAAGPPKQHRFVQHGWEVGPRGPSLGNDPSAGSPTETLLRLLLPLNDRV 233
BLAST of mRNA_E-siliculosus-1a_F_contig14845.2826.1 vs. uniprot
Match: A0A150UNC4_9PEZI (Uncharacterized protein (Fragment) n=1 Tax=Acidomyces richmondensis BFW TaxID=766039 RepID=A0A150UNC4_9PEZI) HSP 1 Score: 75.9 bits (185), Expect = 1.600e-15 Identity = 60/120 (50.00%), Postives = 64/120 (53.33%), Query Frame = 1
Query: 22 PGSARCVQSFDDSLDSASRKTYRISLRSSSLWEPRHPSLKVL---------QPDSVAPGHLMKCKDIDNIRTAFEASLPAR--------IQCAPKPYEALFGNDPSAGSPTETLLRLHLP 330
P A CVQ FDDSL+SA TYRISLRSSS+ EPR P LKVL Q DSV K R A A P R + P+P GNDPSAGSPTETLLRL LP
Sbjct: 3 PRGAMCVQRFDDSLNSAIHITYRISLRSSSMPEPRDPLLKVLFDFALRSDAQQDSVG-------KVPRGPRRA--AGSPPRHKGLKVWGSEVGPEPS---LGNDPSAGSPTETLLRLLLP 110
BLAST of mRNA_E-siliculosus-1a_F_contig14845.2826.1 vs. uniprot
Match: A0A401KRB4_ASPAW (Uncharacterized protein n=3 Tax=Aspergillus TaxID=5052 RepID=A0A401KRB4_ASPAW) HSP 1 Score: 80.5 bits (197), Expect = 2.590e-15 Identity = 57/124 (45.97%), Postives = 65/124 (52.42%), Query Frame = 1
Query: 22 PGSARCVQSFDDSLDSASRKTYRISLRSSSLWEPRHPSLKVLQPDSVAPGHLMKCKDI----DNIRTAFEASLPARIQCAPKPYEAL---------------FGNDPSAGSPTETLLRLHLPLN 336
PG A CVQ DDSL+SA +YRISLRSSS+ EPR P LKVL D + + + + T A P R + P EA GNDPSAGSPTETLLRL LPLN
Sbjct: 116 PGGAMCVQRLDDSLNSAIHISYRISLRSSSMPEPRDPLLKVLT-DCIQSTQTARFQTVFVLGSPAGTGRGAEAPPRRPTSGGPAEATGYNRHGWEVGPKGPALGNDPSAGSPTETLLRLLLPLN 238
BLAST of mRNA_E-siliculosus-1a_F_contig14845.2826.1 vs. uniprot
Match: A0A524MI88_9PROT (Uncharacterized protein n=1 Tax=Nitrosomonadales bacterium TaxID=2026761 RepID=A0A524MI88_9PROT) HSP 1 Score: 72.8 bits (177), Expect = 3.130e-14 Identity = 33/45 (73.33%), Postives = 37/45 (82.22%), Query Frame = 2
Query: 2 KHAPRHIPEAQDAFKVLMIHWILQVARRIAFRCVLHRCGSQDIRR 136
+HA HIPEAQ AFK+LMIH +LQ A RIAFRCVLHRCG+ DI R
Sbjct: 75 RHATGHIPEAQCAFKILMIHEVLQFALRIAFRCVLHRCGNLDIHR 119
BLAST of mRNA_E-siliculosus-1a_F_contig14845.2826.1 vs. uniprot
Match: A0A2Z7BFW8_9LAMI (Tar1p (Fragment) n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7BFW8_9LAMI) HSP 1 Score: 76.3 bits (186), Expect = 4.900e-14 Identity = 51/116 (43.97%), Postives = 65/116 (56.03%), Query Frame = 1
Query: 31 ARCVQSFDDSLDSASRKTYRISLRSSSLWEPRHPSLKVLQP-----DSVAPGHLMKCKDIDNIRTAF------EASLPARIQCAPKPYEALFGNDPSAGSPTETLLRLHLPLNHEV 345
A CVQ D S DSA YRISLRSSS+ EPR+P +V+ S G+ ++ D + I F E L ++ C + + + NDPSAGSPTETLLRL LPLN +V
Sbjct: 36 ATCVQRLDGSRDSAIHTKYRISLRSSSMREPRYPFPRVVMTFFNRCSSSRHGYRVRNPDGEVIGLVFLGACRAEMLLHTQVTCVAR-VQGRYDNDPSAGSPTETLLRLLLPLNDKV 150
BLAST of mRNA_E-siliculosus-1a_F_contig14845.2826.1 vs. uniprot
Match: A0A1E7F0G0_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F0G0_9STRA) HSP 1 Score: 68.9 bits (167), Expect = 1.950e-13 Identity = 32/45 (71.11%), Postives = 36/45 (80.00%), Query Frame = 2
Query: 2 KHAPRHIPEAQDAFKVLMIHWILQVARRIAFRCVLHRCGSQDIRR 136
KHA IP+AQ AFK+LMIH +LQ A RIAFRCVLHRCG+ DI R
Sbjct: 10 KHATGKIPKAQCAFKILMIHEVLQFALRIAFRCVLHRCGNLDIHR 54
BLAST of mRNA_E-siliculosus-1a_F_contig14845.2826.1 vs. uniprot
Match: B8CEF4_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CEF4_THAPS) HSP 1 Score: 67.4 bits (163), Expect = 1.460e-12 Identity = 32/43 (74.42%), Postives = 34/43 (79.07%), Query Frame = 2
Query: 2 KHAPRHIPEAQDAFKVLMIHWILQVARRIAFRCVLHRCGSQDI 130
KHA H P+AQ AFK LMIH +LQ A RIAFRCVLHRCG QDI
Sbjct: 35 KHALGHYPKAQCAFKSLMIHEVLQFALRIAFRCVLHRCGIQDI 77 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig14845.2826.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig14845.2826.1 >prot_E-siliculosus-1a_F_contig14845.2826.1 ID=prot_E-siliculosus-1a_F_contig14845.2826.1|Name=mRNA_E-siliculosus-1a_F_contig14845.2826.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=115bp QACSQAYPGSARCVQSFDDSLDSASRKTYRISLRSSSLWEPRHPSLKVLQback to top mRNA from alignment at E-siliculosus-1a_F_contig14845:6..995+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig14845.2826.1 ID=mRNA_E-siliculosus-1a_F_contig14845.2826.1|Name=mRNA_E-siliculosus-1a_F_contig14845.2826.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=990bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig14845:6..995+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig14845:6..995+ >mRNA_E-siliculosus-1a_F_contig14845.2826.1 ID=mRNA_E-siliculosus-1a_F_contig14845.2826.1|Name=mRNA_E-siliculosus-1a_F_contig14845.2826.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=690bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig14845:6..995+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |