mRNA_E-siliculosus-1a_F_contig14818.2813.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
|
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig14818.2813.1 vs. uniprot
Match: A0A0D5LYG7_9GAMM (Acriflavin resistance protein n=43 Tax=Halomonadaceae TaxID=28256 RepID=A0A0D5LYG7_9GAMM) HSP 1 Score: 625 bits (1611), Expect = 2.750e-215 Identity = 316/349 (90.54%), Postives = 337/349 (96.56%), Query Frame = 1
Query: 1 FFPASNTPIFFVDYRTPEGTDILETQRRVSELENSVMAMPGVRHLTTTVGGGAQRFTLTYSPEDRYASYAQLIVETENKTIQRERMAEVEQVLERDHSDIDYKIAPLEVGPAPKAKLEARFYGSDPAVLRQLGEQVEAMFRDTPTMTSVRTSWRNRVQVIEPVFLEDTARRLGVTREELANTLALSTSGSQVGIYRDGSNLIPIVARAISEQRHDVDNLGSLNVWSEEQRRYITADQVMSDITTQVADPLIMRRNRERMLAVYGEPHPLSGVTAASVLAEIRPRVEALEIPAGYRLEWGGEYETAGEAQSGLFASLPLGLVMMFIITVVLFNNFRQPLAIWSLVPLTII 1047
FFPASNTPIFFVDYRTPEGTDILETQRRVSELE SVMAM GVRHLTTTVGGGAQRFTLTYSPEDRYASYAQLI+ET++K IQ+ RMA+VEQVLERDHSDID+KI PLEVGPAPKAKLEARFYGSDPAVLRQLG+QVEAMFRDTP MTSVRTSWRNRVQ IEPVFLEDTARRLGVTRE+LA+TLALSTSGSQVG+YRDGS+LIPIVAR+I EQRHDVDNLGSLNVWS EQ RYITADQV+SDITTQVADPLIMRRNRERMLAVYGEP PLSGVTAASVL +IRPRVEAL++P+GYRLEWGGE+ETAGEAQSGLF+SLPLG+VMMFI+TVVLFNNFRQPLAIWSLVPLTII
Sbjct: 545 FFPASNTPIFFVDYRTPEGTDILETQRRVSELEESVMAMEGVRHLTTTVGGGAQRFTLTYSPEDRYASYAQLIIETDDKAIQQARMADVEQVLERDHSDIDFKIVPLEVGPAPKAKLEARFYGSDPAVLRQLGDQVEAMFRDTPNMTSVRTSWRNRVQAIEPVFLEDTARRLGVTREDLASTLALSTSGSQVGVYRDGSDLIPIVARSIPEQRHDVDNLGSLNVWSAEQSRYITADQVISDITTQVADPLIMRRNRERMLAVYGEPDPLSGVTAASVLTDIRPRVEALDLPSGYRLEWGGEFETAGEAQSGLFSSLPLGIVMMFILTVVLFNNFRQPLAIWSLVPLTII 893
BLAST of mRNA_E-siliculosus-1a_F_contig14818.2813.1 vs. uniprot
Match: A0A5J6LAG9_9GAMM (Efflux RND transporter permease subunit n=1 Tax=Nitrincola iocasae TaxID=2614693 RepID=A0A5J6LAG9_9GAMM) HSP 1 Score: 614 bits (1584), Expect = 3.310e-211 Identity = 307/349 (87.97%), Postives = 336/349 (96.28%), Query Frame = 1
Query: 1 FFPASNTPIFFVDYRTPEGTDILETQRRVSELENSVMAMPGVRHLTTTVGGGAQRFTLTYSPEDRYASYAQLIVETENKTIQRERMAEVEQVLERDHSDIDYKIAPLEVGPAPKAKLEARFYGSDPAVLRQLGEQVEAMFRDTPTMTSVRTSWRNRVQVIEPVFLEDTARRLGVTREELANTLALSTSGSQVGIYRDGSNLIPIVARAISEQRHDVDNLGSLNVWSEEQRRYITADQVMSDITTQVADPLIMRRNRERMLAVYGEPHPLSGVTAASVLAEIRPRVEALEIPAGYRLEWGGEYETAGEAQSGLFASLPLGLVMMFIITVVLFNNFRQPLAIWSLVPLTII 1047
FFPASNTPIFFVDYRTPEGTDILETQRR+SELENSVM M G+RHLTTTVGGGAQRFTLTYSPE+RYASYAQLIVET+NK+ QRER+AEVE+VL+RDHSDIDYKIAPLEVGP+PKAKLEAR YGSDP VLRQLG+QVEA+FRDTP MTSVR SWRNRVQ ++PVFLEDTARRLGVTRE+LA+TLA+STSGSQVG+YRDGS+LIPIVARA EQR+DVDN+GSLNVWS EQ RYITADQVMSD+TTQVADPLIMRRNRERMLA+YGEPHPLSGVTAASVLAEIRP+V+AL +PAGYRLEWGGEYET+G+AQSGLFASLPLGLV+MFI+TVVLFNNFRQPLAIWSLVPLTII
Sbjct: 545 FFPASNTPIFFVDYRTPEGTDILETQRRISELENSVMEMEGIRHLTTTVGGGAQRFTLTYSPENRYASYAQLIVETDNKSTQRERIAEVEKVLKRDHSDIDYKIAPLEVGPSPKAKLEARLYGSDPEVLRQLGDQVEALFRDTPHMTSVRASWRNRVQTLKPVFLEDTARRLGVTREDLASTLAVSTSGSQVGVYRDGSDLIPIVARATQEQRYDVDNIGSLNVWSNEQGRYITADQVMSDVTTQVADPLIMRRNRERMLAIYGEPHPLSGVTAASVLAEIRPQVDALALPAGYRLEWGGEYETSGDAQSGLFASLPLGLVVMFILTVVLFNNFRQPLAIWSLVPLTII 893
BLAST of mRNA_E-siliculosus-1a_F_contig14818.2813.1 vs. uniprot
Match: A0A060B416_9GAMM (Multidrug transporter AcrB n=18 Tax=Halomonas TaxID=2745 RepID=A0A060B416_9GAMM) HSP 1 Score: 591 bits (1523), Expect = 5.470e-202 Identity = 298/349 (85.39%), Postives = 324/349 (92.84%), Query Frame = 1
Query: 1 FFPASNTPIFFVDYRTPEGTDILETQRRVSELENSVMAMPGVRHLTTTVGGGAQRFTLTYSPEDRYASYAQLIVETENKTIQRERMAEVEQVLERDHSDIDYKIAPLEVGPAPKAKLEARFYGSDPAVLRQLGEQVEAMFRDTPTMTSVRTSWRNRVQVIEPVFLEDTARRLGVTREELANTLALSTSGSQVGIYRDGSNLIPIVARAISEQRHDVDNLGSLNVWSEEQRRYITADQVMSDITTQVADPLIMRRNRERMLAVYGEPHPLSGVTAASVLAEIRPRVEALEIPAGYRLEWGGEYETAGEAQSGLFASLPLGLVMMFIITVVLFNNFRQPLAIWSLVPLTII 1047
FFPASNTPIFFVDYRTPEGTDILET+RRV+ELE VM M GVRHLTT VGGGAQRFTLTY+PEDRYASY+QLIVET+NK IQ+ RMA++E VLERDHSDIDYKIAPLEVGPAPKAK+EARFYGSDPAVLRQLG+QV A+F DT M SVRT+WRNRVQ + P+F EDTARRLGVTRE LA TLALSTSGSQVGIYRDGS+LIPIVARAI EQR+D+DN+GSLNVWS EQ RYITADQVM D+TTQVADPLIMRR+RERMLAVYGEP PLSGVTAASVLA++RP+VEALE+P GYRLEWGGE+ETAGEAQSGLFASLPLGLVMMFIITVVLFNNFRQPLAIW LVPLTI+
Sbjct: 545 FFPASNTPIFFVDYRTPEGTDILETERRVAELEEVVMEMEGVRHLTTVVGGGAQRFTLTYAPEDRYASYSQLIVETDNKAIQQARMADIEAVLERDHSDIDYKIAPLEVGPAPKAKIEARFYGSDPAVLRQLGDQVAALFSDTSNMVSVRTNWRNRVQAVVPIFAEDTARRLGVTRENLAATLALSTSGSQVGIYRDGSDLIPIVARAIPEQRNDIDNVGSLNVWSAEQGRYITADQVMRDVTTQVADPLIMRRDRERMLAVYGEPDPLSGVTAASVLAQVRPQVEALELPPGYRLEWGGEFETAGEAQSGLFASLPLGLVMMFIITVVLFNNFRQPLAIWFLVPLTIV 893
BLAST of mRNA_E-siliculosus-1a_F_contig14818.2813.1 vs. uniprot
Match: A0A7C9NPX9_9GAMM (Efflux RND transporter permease subunit n=2 Tax=Halomonas TaxID=2745 RepID=A0A7C9NPX9_9GAMM) HSP 1 Score: 565 bits (1456), Expect = 5.450e-192 Identity = 283/349 (81.09%), Postives = 316/349 (90.54%), Query Frame = 1
Query: 1 FFPASNTPIFFVDYRTPEGTDILETQRRVSELENSVMAMPGVRHLTTTVGGGAQRFTLTYSPEDRYASYAQLIVETENKTIQRERMAEVEQVLERDHSDIDYKIAPLEVGPAPKAKLEARFYGSDPAVLRQLGEQVEAMFRDTPTMTSVRTSWRNRVQVIEPVFLEDTARRLGVTREELANTLALSTSGSQVGIYRDGSNLIPIVARAISEQRHDVDNLGSLNVWSEEQRRYITADQVMSDITTQVADPLIMRRNRERMLAVYGEPHPLSGVTAASVLAEIRPRVEALEIPAGYRLEWGGEYETAGEAQSGLFASLPLGLVMMFIITVVLFNNFRQPLAIWSLVPLTII 1047
FFPASNTPIFFVDYRTPEGTDILET+RRV+ LE SVM M G++ LTT VGGGAQRFTLTY+PEDR+ASYAQLI+ET++K Q+ RMA+VE +L RDHSDIDYKIAPLEVGPAPKAKLEAR YGSDPAVLR+LG+QV A+F DTP +TSVRT+WRNRVQ I P+F ED ARRLGVTRE LA TLALSTSGSQVG+YRDGS+LIPIVARAI QR+D+DN+GSLNVWS EQ RYITADQVM D+TTQVADPLIMRRNRERMLAVYGEPHPLSGVTAASVL ++RP+VEALE+P GYRLEWGGE+ET+G+AQ LFASLPLGL +MFIITVVLFNNFRQ LA+W LVPLTII
Sbjct: 545 FFPASNTPIFFVDYRTPEGTDILETERRVTALEESVMGMEGIQQLTTIVGGGAQRFTLTYAPEDRFASYAQLIIETDDKATQQARMADVEAMLARDHSDIDYKIAPLEVGPAPKAKLEARLYGSDPAVLRELGDQVAALFNDTPNLTSVRTNWRNRVQSIVPIFAEDAARRLGVTRESLAATLALSTSGSQVGVYRDGSDLIPIVARAIPAQRNDIDNIGSLNVWSAEQGRYITADQVMRDVTTQVADPLIMRRNRERMLAVYGEPHPLSGVTAASVLDKVRPQVEALELPPGYRLEWGGEFETSGDAQRALFASLPLGLAVMFIITVVLFNNFRQALAVWFLVPLTII 893
BLAST of mRNA_E-siliculosus-1a_F_contig14818.2813.1 vs. uniprot
Match: A0A3T1DYA4_9GAMM (Uncharacterized protein n=1 Tax=Halomonas olivaria TaxID=390919 RepID=A0A3T1DYA4_9GAMM) HSP 1 Score: 538 bits (1386), Expect = 1.500e-189 Identity = 275/301 (91.36%), Postives = 291/301 (96.68%), Query Frame = 1
Query: 145 VGGGAQRFTLTYSPEDRYASYAQLIVETENKTIQRERMAEVEQVLERDHSDIDYKIAPLEVGPAPKAKLEARFYGSDPAVLRQLGEQVEAMFRDTPTMTSVRTSWRNRVQVIEPVFLEDTARRLGVTREELANTLALSTSGSQVGIYRDGSNLIPIVARAISEQRHDVDNLGSLNVWSEEQRRYITADQVMSDITTQVADPLIMRRNRERMLAVYGEPHPLSGVTAASVLAEIRPRVEALEIPAGYRLEWGGEYETAGEAQSGLFASLPLGLVMMFIITVVLFNNFRQPLAIWSLVPLTII 1047
+GGGAQRFTLTYSPEDRYASYAQLIVET++K Q +RMA+VEQVL+RDHSDIDYKIAPLEVGPAPKAKLEARFYGSDPAVLRQLG+QVEAMFRDTP MTSVRTSWRNRVQ IEPVFLEDTARRLGVTRE+LA+TLALSTSGSQVGIYRDGS+LIPIVARAI EQRHDVDNLGSLNVWS EQ RYITADQV+SDI TQVADPLIMRRNRERMLAVYGEP PLSG+TAASVLAEIRPRVEAL++PAGYRLEWGGEYETAGEAQSGLFASLPLG+VMMFI+TVVLFNNFRQPLAIWSLVPLTII
Sbjct: 1 MGGGAQRFTLTYSPEDRYASYAQLIVETDDKATQHDRMADVEQVLKRDHSDIDYKIAPLEVGPAPKAKLEARFYGSDPAVLRQLGDQVEAMFRDTPNMTSVRTSWRNRVQAIEPVFLEDTARRLGVTREDLASTLALSTSGSQVGIYRDGSDLIPIVARAIPEQRHDVDNLGSLNVWSAEQNRYITADQVISDIITQVADPLIMRRNRERMLAVYGEPDPLSGMTAASVLAEIRPRVEALDLPAGYRLEWGGEYETAGEAQSGLFASLPLGIVMMFILTVVLFNNFRQPLAIWSLVPLTII 301
BLAST of mRNA_E-siliculosus-1a_F_contig14818.2813.1 vs. uniprot
Match: A0A368TZJ3_9GAMM (AcrB/AcrD/AcrF family protein n=2 Tax=Halomonas TaxID=2745 RepID=A0A368TZJ3_9GAMM) HSP 1 Score: 556 bits (1433), Expect = 1.590e-188 Identity = 284/349 (81.38%), Postives = 306/349 (87.68%), Query Frame = 1
Query: 1 FFPASNTPIFFVDYRTPEGTDILETQRRVSELENSVMAMPGVRHLTTTVGGGAQRFTLTYSPEDRYASYAQLIVETENKTIQRERMAEVEQVLERDHSDIDYKIAPLEVGPAPKAKLEARFYGSDPAVLRQLGEQVEAMFRDTPTMTSVRTSWRNRVQVIEPVFLEDTARRLGVTREELANTLALSTSGSQVGIYRDGSNLIPIVARAISEQRHDVDNLGSLNVWSEEQRRYITADQVMSDITTQVADPLIMRRNRERMLAVYGEPHPLSGVTAASVLAEIRPRVEALEIPAGYRLEWGGEYETAGEAQSGLFASLPLGLVMMFIITVVLFNNFRQPLAIWSLVPLTII 1047
FFPASNTPIFFVDY PEGTDILETQRR+SELE +VMAM G+ HLTT VGGGAQRFTLTYSPE+RYASYAQLIVET +K Q +RM EVE LER H D+DYKI PLEVGPAPKAKLEAR YGSDP VLRQLG VEA+F + P TSVR SWRNRVQVI+PVFLED ARRLGVTR LA+TLAL+TSG+QVGIYRDGS+LIPI+ARA QRHDVDN GSLNVWSEE+ RYI ADQV+ +TTQVADPLI+RRNR+RMLAVY EPHPLSGVTAASVL IRP VEALE+P GYRLEWGGEYETAGEAQSGLFASLPLGLV+MFIITVVLFNN RQ LAIWSLVPLTII
Sbjct: 545 FFPASNTPIFFVDYWMPEGTDILETQRRISELEETVMAMEGIEHLTTVVGGGAQRFTLTYSPEERYASYAQLIVETPDKQTQHQRMGEVEAALERYHPDVDYKIMPLEVGPAPKAKLEARLYGSDPEVLRQLGADVEALFHEEPLATSVRQSWRNRVQVIKPVFLEDAARRLGVTRAGLADTLALNTSGAQVGIYRDGSDLIPIIARAAPGQRHDVDNFGSLNVWSEERGRYIAADQVIEQVTTQVADPLILRRNRQRMLAVYAEPHPLSGVTAASVLERIRPEVEALELPPGYRLEWGGEYETAGEAQSGLFASLPLGLVVMFIITVVLFNNLRQALAIWSLVPLTII 893
BLAST of mRNA_E-siliculosus-1a_F_contig14818.2813.1 vs. uniprot
Match: A0A1G8R4H1_9GAMM (Multidrug efflux pump subunit AcrB n=1 Tax=Halomonas gudaonensis TaxID=376427 RepID=A0A1G8R4H1_9GAMM) HSP 1 Score: 526 bits (1355), Expect = 8.620e-177 Identity = 264/349 (75.64%), Postives = 307/349 (87.97%), Query Frame = 1
Query: 1 FFPASNTPIFFVDYRTPEGTDILETQRRVSELENSVMAMPGVRHLTTTVGGGAQRFTLTYSPEDRYASYAQLIVETENKTIQRERMAEVEQVLERDHSDIDYKIAPLEVGPAPKAKLEARFYGSDPAVLRQLGEQVEAMFRDTPTMTSVRTSWRNRVQVIEPVFLEDTARRLGVTREELANTLALSTSGSQVGIYRDGSNLIPIVARAISEQRHDVDNLGSLNVWSEEQRRYITADQVMSDITTQVADPLIMRRNRERMLAVYGEPHPLSGVTAASVLAEIRPRVEALEIPAGYRLEWGGEYETAGEAQSGLFASLPLGLVMMFIITVVLFNNFRQPLAIWSLVPLTII 1047
FFPASNTPIFFVDY TPEGTDILET +RV ELE++VM MP +RHLTTT+GGGAQRFTL YSPEDRYASYAQLIVET++KT Q RMA+VE+ LER H + D+KIAPLEVGP+PKAK+EAR YGSDP LR+L ++EA+FRD P TSVR SWRNRVQ IEPVFLEDTARRLGV+R +LA+TLA++T+G ++G YRDGS+LIPIVARA+ EQRHDVD+LGSLNVWS E+ RYI ADQV+ I T+VADPLI+RR+R+RMLAVY EP PL VTAASVL +R VEALE+P+GYRLEWGGE+ET+ EAQSGLF+SLPLGLV+MFIITVVLFNN+RQPLAIWSLVPLT+I
Sbjct: 545 FFPASNTPIFFVDYWTPEGTDILETAKRVGELEDAVMEMPDIRHLTTTIGGGAQRFTLPYSPEDRYASYAQLIVETDDKTSQHARMADVERELERRHPEADFKIAPLEVGPSPKAKIEARLYGSDPQTLRRLAGEIEAIFRDEPLATSVRHSWRNRVQAIEPVFLEDTARRLGVSRSDLADTLAMNTTGVRLGTYRDGSDLIPIVARAVPEQRHDVDDLGSLNVWSAERGRYIPADQVIERIDTEVADPLILRRDRQRMLAVYAEPDPLRDVTAASVLERVRSDVEALELPSGYRLEWGGEHETSSEAQSGLFSSLPLGLVIMFIITVVLFNNWRQPLAIWSLVPLTVI 893
BLAST of mRNA_E-siliculosus-1a_F_contig14818.2813.1 vs. uniprot
Match: A0A0P7CZR3_9GAMM (Multidrug transporter AcrB n=23 Tax=Bacteria TaxID=2 RepID=A0A0P7CZR3_9GAMM) HSP 1 Score: 417 bits (1071), Expect = 2.320e-134 Identity = 202/349 (57.88%), Postives = 265/349 (75.93%), Query Frame = 1
Query: 1 FFPASNTPIFFVDYRTPEGTDILETQRRVSELENSVMAMPGVRHLTTTVGGGAQRFTLTYSPEDRYASYAQLIVETENKTIQRERMAEVEQVLERDHSDIDYKIAPLEVGPAPKAKLEARFYGSDPAVLRQLGEQVEAMFRDTPTMTSVRTSWRNRVQVIEPVFLEDTARRLGVTREELANTLALSTSGSQVGIYRDGSNLIPIVARAISEQRHDVDNLGSLNVWSEEQRRYITADQVMSDITTQVADPLIMRRNRERMLAVYGEPHPLSGVTAASVLAEIRPRVEALEIPAGYRLEWGGEYETAGEAQSGLFASLPLGLVMMFIITVVLFNNFRQPLAIWSLVPLTII 1047
FFP ++TP+FFVD PEGTD+L T+ R+++LE V+ M V H+T+ GGGAQRFTLTYSPED YAS+ QLIVET+++ + RM +V +++ ++ +++YK+ L+VGP+ KA LEAR YG DPAVLRQL +V ++F + P S+R SWRNRV IEP FL+D ARR+GVTR+ L L +++ G VG+YR+GS LIPI+ R QR D+D L SLNVWS+EQ Y+ A VM + T++ DPLI RR+R+RMLAVY EP PLSG TAASVL IRP++EA+E+P GY LEWGGEYET+ EAQ LF+SLP+GL+ MF+ITV+LF+N RQ LAIWS+VPLT+I
Sbjct: 553 FFPDASTPLFFVDVWMPEGTDVLATEARIADLEQQVLKMDKVNHVTSVTGGGAQRFTLTYSPEDSYASFGQLIVETQDRASREARMEKVIRLVRAEYPEVEYKVQALQVGPSAKASLEARLYGEDPAVLRQLAGKVRSVFEEEPLADSIRLSWRNRVNRIEPEFLDDQARRVGVTRDSLHQALLINSDGESVGVYREGSELIPILLRGEERQRFDLDTLASLNVWSDEQETYVPAGSVMGPLETELRDPLIKRRDRQRMLAVYAEPMPLSGETAASVLGRIRPKIEAIELPEGYHLEWGGEYETSSEAQEALFSSLPMGLLGMFVITVLLFSNLRQALAIWSIVPLTLI 901
BLAST of mRNA_E-siliculosus-1a_F_contig14818.2813.1 vs. uniprot
Match: A0A3N9TXT0_9GAMM (Efflux RND transporter permease subunit n=13 Tax=Halomonadaceae TaxID=28256 RepID=A0A3N9TXT0_9GAMM) HSP 1 Score: 412 bits (1059), Expect = 1.040e-132 Identity = 202/349 (57.88%), Postives = 258/349 (73.93%), Query Frame = 1
Query: 1 FFPASNTPIFFVDYRTPEGTDILETQRRVSELENSVMAMPGVRHLTTTVGGGAQRFTLTYSPEDRYASYAQLIVETENKTIQRERMAEVEQVLERDHSDIDYKIAPLEVGPAPKAKLEARFYGSDPAVLRQLGEQVEAMFRDTPTMTSVRTSWRNRVQVIEPVFLEDTARRLGVTREELANTLALSTSGSQVGIYRDGSNLIPIVARAISEQRHDVDNLGSLNVWSEEQRRYITADQVMSDITTQVADPLIMRRNRERMLAVYGEPHPLSGVTAASVLAEIRPRVEALEIPAGYRLEWGGEYETAGEAQSGLFASLPLGLVMMFIITVVLFNNFRQPLAIWSLVPLTII 1047
FFP + TP+FF D PEGTD+LET+R ++ LE V+ M V +T+ +GGGAQRFTLTY+PEDRYAS+ QLIVETE++ + RM EV + L D + YK+ L+VGP+ KA +EAR YG DP L +LG +V +F+D P S+R SW NR VI P FLE ARR+GVTR+ L L L+ G QVG+YR+GS LIPIV R+ +QRHD+DNL ++NVWSEEQ RY++A V+ ++ T++ DPLI RR+R RMLAVY EP PLSG TAASVLA +RP+VEA+E+P GY +EWGGEYETA +AQ L +SLP+GL+ MFIITV+LF RQ LAIWS+VPL +I
Sbjct: 547 FFPDATTPLFFADVWLPEGTDVLETERTIARLETQVLEMQDVTRVTSVIGGGAQRFTLTYAPEDRYASFGQLIVETEDRASREARMKEVIETLREDFPRVQYKVQALQVGPSAKASIEARIYGDDPETLHRLGAEVRGIFQDEPMTDSIRLSWSNRESVIVPEFLEQQARRVGVTRDALHQALRLNNDGEQVGVYREGSELIPIVMRSREDQRHDIDNLSAVNVWSEEQGRYLSAGNVLGELHTELRDPLIKRRDRRRMLAVYAEPMPLSGETAASVLARLRPQVEAIELPPGYAIEWGGEYETASDAQKALLSSLPMGLLGMFIITVLLFGRLRQALAIWSIVPLMLI 895
BLAST of mRNA_E-siliculosus-1a_F_contig14818.2813.1 vs. uniprot
Match: UPI00047FC6C5 (efflux RND transporter permease subunit n=2 Tax=Halomonas TaxID=2745 RepID=UPI00047FC6C5) HSP 1 Score: 409 bits (1052), Expect = 1.290e-131 Identity = 203/349 (58.17%), Postives = 263/349 (75.36%), Query Frame = 1
Query: 1 FFPASNTPIFFVDYRTPEGTDILETQRRVSELENSVMAMPGVRHLTTTVGGGAQRFTLTYSPEDRYASYAQLIVETENKTIQRERMAEVEQVLERDHSDIDYKIAPLEVGPAPKAKLEARFYGSDPAVLRQLGEQVEAMFRDTPTMTSVRTSWRNRVQVIEPVFLEDTARRLGVTREELANTLALSTSGSQVGIYRDGSNLIPIVARAISEQRHDVDNLGSLNVWSEEQRRYITADQVMSDITTQVADPLIMRRNRERMLAVYGEPHPLSGVTAASVLAEIRPRVEALEIPAGYRLEWGGEYETAGEAQSGLFASLPLGLVMMFIITVVLFNNFRQPLAIWSLVPLTII 1047
FFP + TP+FFVD PEGTD+LET +V+ LE +V+ M V ++T+ +GGGAQRFTLTY+PED YAS+ QLIVET ++ + RM EV ++L RD I YK+ L+VGP+ KA LEAR YG D VLR+L ++V+ +F P + SVR SW NRV VIEP FL++ ARR+GVTR L L ++ G QVG+YR+GS LIPI+ RA QRHD+D+L +LNVWS+EQ Y++A V+ + T DPLI RR+R+RMLA+Y EP PLSG TAASVLA +RP VEA+E+P GYRLEWGGEY+T+GEA+ LF+SLPLGL+ MF+ITV+LF + RQ LAIWS+VPLT++
Sbjct: 549 FFPDATTPLFFVDVWLPEGTDVLETDAQVARLEQAVLDMDAVENVTSVIGGGAQRFTLTYAPEDSYASFGQLIVETTDRDSREARMEEVIRLLRRDFPRIQYKVKALQVGPSSKASLEARLYGPDAEVLRRLADRVQGVFEAEPLVDSVRLSWSNRVNVIEPAFLDEQARRVGVTRAALHQALLINNDGEQVGVYREGSELIPILLRAEESQRHDLDDLHALNVWSDEQASYVSAGTVLGPLETHPRDPLIKRRDRQRMLAIYAEPMPLSGETAASVLARLRPEVEAIELPPGYRLEWGGEYQTSGEAKQALFSSLPLGLLGMFVITVLLFASLRQALAIWSIVPLTLV 897 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig14818.2813.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig14818.2813.1 >prot_E-siliculosus-1a_F_contig14818.2813.1 ID=prot_E-siliculosus-1a_F_contig14818.2813.1|Name=mRNA_E-siliculosus-1a_F_contig14818.2813.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=349bp FFPASNTPIFFVDYRTPEGTDILETQRRVSELENSVMAMPGVRHLTTTVGback to top mRNA from alignment at E-siliculosus-1a_F_contig14818:3..1049+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig14818.2813.1 ID=mRNA_E-siliculosus-1a_F_contig14818.2813.1|Name=mRNA_E-siliculosus-1a_F_contig14818.2813.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1047bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig14818:3..1049+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig14818:3..1049+ >mRNA_E-siliculosus-1a_F_contig14818.2813.1 ID=mRNA_E-siliculosus-1a_F_contig14818.2813.1|Name=mRNA_E-siliculosus-1a_F_contig14818.2813.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2094bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig14818:3..1049+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |