mRNA_E-siliculosus-1a_F_contig148.2806.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig148.2806.1 vs. uniprot
Match: A0A6H5KP28_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP28_9PHAE) HSP 1 Score: 2214 bits (5737), Expect = 0.000e+0 Identity = 1539/1809 (85.07%), Postives = 1580/1809 (87.34%), Query Frame = 1
Query: 25 MTETMWEWDGPESEQLRPRARNNSDEDDDGERGMPLPPMSPLWREHGKGQGGGGIHIVVCCCNETQEELKVMLSTFRTDATASCSVRISFVLDPRGPAEASSETDEVLKRLLRVTDESATEVAGCTHHSGTLDKTLIPFDLYVKGPSLPVGKRNSLVTFFNDILPVKMSRGEAVEPDVVYLLDADSGHPVNGLEDLESMWRLLMAEEEVACVTCPVRPVHPMESFLAASQSLEFALWDNVGESHFGVQTTCRGAQCMFKYRCLVEDGRLAQPPVGEGAMPPLLNSFSKTAAGLPALMRVLIPRLLDSSPNEGLLVLLRQRGFDVRSCGTADGVTCVPCSWIEFYAQRRRWYAGSLVAVSSHLTGKESYFQTEWHRWIISSYAFVANLFLHSGLALMPVLLAKGIHRLVLYDESRGESDDEWNNEWSEWQEESTDDDIDRHTNLEWIIFALVWGFLLLNVGVYLTRSQDQLWMWINVTSVLWMLLCAGTLIGSGFAVSPLIPVMIAIIPPVLAGLNTSRGTIATWRYLCIAAVPFVLLTTVNSVLVLLYALATLDSTEWGTRDVGSFDSGVSKLRAVSMRRRKLCILLTTMATSCALGVVMMISSTLIFLPIVIGIPSAAYLLKLLLVVVPAKLERSRQTDLLGDVGSRPLSLRRNVAEMAPINGCPPEFGTDRHGGGGRNGGGVGQKGLGPKSPAKTGSHVTAEDGTPSPGDMDVSTSGSFFGAGLSVVGDSSASGSAADGPGHRRRGSKSASISSGFAGVAGXXXXXXXXGDMSWSNSAHSAGSRRSSAXXXXXXXXXXSTIGRDGSAAGRPRAXXXXXXXXXXXXXQDVSETAAMATQGRNRKTSSALGSGLRASLKRMNSRGRSSSTGPSSAVGDDAHGVTVKGARRTGFARFLSAKDSVEGISLDGAKPTTSKKAEIRKAWGLRKATSESDDSTEMFVMESLNRKLNPHGIRGNSSSCPPDSSFAESPPPAFRPQNTALAAXXXXXXXXXXXXXXXXXXXXSPAAARVATAXPASTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXT-----------AAPADGEVRRYSWACPQPSTSEFDAPVSKPDXXXXXXXXXXXXXXXXXXXXXXXXXSQAAINTMLNARVGATSIRSQRDAIGSGFANVGNRRRPPSTGTLAGIRAAWGTSMGGSQDDIACPLPETN-STRNSRVGAVYATGIIEEDEESESEMEEVDPRLFVPGVQGNRRRALSAGTLAGIRAAWGSSLDDSQEDIPYTSTDKMNVIHNPRVGVNSVRAHILDDESESENEFVDSRSLMPGIAAGRRRPLGGGTLAGIRAAWGNSMGESQDDIACPSPATVNARLNSRAGVVYSRGGDRYASGHVVRGQPMPAGMRNGRGQAGLGIDQDDVIGYHSTSG--------------------------------------------------------------RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSGRAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGSNKAVSATRRHSRSEPRAVEGSGSMGRVKVAGNGAVVGRVRDHANAAAGHERGSGGGGRDTAGSDTRGQRSKATGGAGGRRXXXXXXTNKSV 5229
MTETMWEWDGPESE+L RGMPLP MSPLWREHGKGQGGGGIHIVVCCCNETQEELKVMLSTFR DATASC VRISFVLDPRGPA+ASSETD+VLKRLLRVTDESATEV GC HHSGTLDKTLIPFDLYVKGPSLPVGKRNSLVTFFNDILPVKMSRGEAVEPD VYLLDADSGHPVNGL+DLESMWRLLMAEEEVACVTCPVRPVHPM SFLAASQSLEFALWDNVGESHFGVQTTCRGAQCMFKYRCLVEDGRLA+PP+GEGAMPPLLN FSKTAAGLPAL+ LLDSSP+EGLLVLLRQRGFDVRSCGTADGVTCVPCSWIEFYAQRRRWYAGSLVAVSSHLTGKESYFQ EWHRWIISSYAFVANLFLHSGLALMPVLLAKG+H+LVLYDESRGESDD+WN+EWSEWQEES DD ID+HTNL+WI+FALVWGF LLNVG YLTRSQDQLWMWINVTSVLWMLLC GTL+GSGFAVSPLIPVM+ IIPPVLAGLNT+RGTIATWRYLC+AAVPFVLLTTVNSVLV LYALATLDSTEWGTRDVGSFDSGVSK RA SMRRRKLCIL TTMATSCALGVVMMISS+LIFLPIVIGIPSAAYLLKLLLVVVPAKLERSRQT LLGDVGSRPLSLR +VAE+APINGCPPEF TDRH GG RNGGG+GQKGLGPKSPAKTGSHVTAEDGTPSPG MDVSTSGSFFGAG+SVVGDSSASG AADG GHRR GSKSASISSGFAGVAG XXXXXX GD+ WSNSAH+ GSR+SSA XXXXX+T G+DGSAAGRPRAXXXXXXXXXXX QDVSETAAMATQGRNRKTSSALGSGLRASLKRMNSRGRSSSTGPSSAVGDDAHGV +KGARRTGFARFLSAKDSVEGI+LDGAKPTTSKKAEIRKAWGLRKATSESDDSTEMFVMESLNRKLNPHGIRGNSSSCPPDSSFAESPPPAFR +NTALAA XXXXXXXXXXXXXXXXX X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX APADGEVRRYSWACPQPSTSEFDAPVSKPD SQAAINT LNARVGATSIRSQRDAIGSGFA+VGNRRRPPSTGTLAGIRAAWGTS+GGSQDDIAC LPET STRNSR+GAVYATGIIEEDEE+ESEMEEVDPRLF PGVQGNRRR+LSAGTLAGIRAAWGSSLD SQEDIPYTSTDKMNVIHNPRVGVN VRAHILDDESESENEFVDSRSLMPGIAAGRRRPLGGGTLAGIRAAWGNSMGESQDDIACPSPAT N RLNSRAGVVYSRGGDRYASGHVVRGQPMPAGMRNGRGQ GLGID+DDVIGYH SG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX YGSNKAVSATRR SRSEPRAV+GS SMGRVK GNGAVVGRVRDHANAAAGHER SGGGGR TAGSDTRGQRSKA GGAGG+R T+K
Sbjct: 1 MTETMWEWDGPESERLXXXXXXXXXXXXXXXRGMPLPLMSPLWREHGKGQGGGGIHIVVCCCNETQEELKVMLSTFRIDATASCLVRISFVLDPRGPAQASSETDKVLKRLLRVTDESATEVFGCIHHSGTLDKTLIPFDLYVKGPSLPVGKRNSLVTFFNDILPVKMSRGEAVEPDAVYLLDADSGHPVNGLQDLESMWRLLMAEEEVACVTCPVRPVHPMGSFLAASQSLEFALWDNVGESHFGVQTTCRGAQCMFKYRCLVEDGRLAEPPIGEGAMPPLLNPFSKTAAGLPALI------LLDSSPSEGLLVLLRQRGFDVRSCGTADGVTCVPCSWIEFYAQRRRWYAGSLVAVSSHLTGKESYFQAEWHRWIISSYAFVANLFLHSGLALMPVLLAKGLHQLVLYDESRGESDDDWNDEWSEWQEESADDGIDQHTNLDWIVFALVWGFFLLNVGFYLTRSQDQLWMWINVTSVLWMLLCGGTLVGSGFAVSPLIPVMLVIIPPVLAGLNTARGTIATWRYLCVAAVPFVLLTTVNSVLVFLYALATLDSTEWGTRDVGSFDSGVSKPRAASMRRRKLCILFTTMATSCALGVVMMISSSLIFLPIVIGIPSAAYLLKLLLVVVPAKLERSRQTYLLGDVGSRPLSLRGSVAELAPINGCPPEFSTDRHSGGDRNGGGIGQKGLGPKSPAKTGSHVTAEDGTPSPGGMDVSTSGSFFGAGMSVVGDSSASGPAADGLGHRRHGSKSASISSGFAGVAGVXXXXXXGGDICWSNSAHATGSRQSSAAGMAGXXXXXNTSGKDGSAAGRPRAXXXXXXXXXXXSRQDVSETAAMATQGRNRKTSSALGSGLRASLKRMNSRGRSSSTGPSSAVGDDAHGVAIKGARRTGFARFLSAKDSVEGITLDGAKPTTSKKAEIRKAWGLRKATSESDDSTEMFVMESLNRKLNPHGIRGNSSSCPPDSSFAESPPPAFRARNTALAAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMGAPADGEVRRYSWACPQPSTSEFDAPVSKPDAAARAAEQNRRLSWGNSSMDSEEFDSQAAINTKLNARVGATSIRSQRDAIGSGFADVGNRRRPPSTGTLAGIRAAWGTSIGGSQDDIACRLPETKTSTRNSRLGAVYATGIIEEDEENESEMEEVDPRLFAPGVQGNRRRSLSAGTLAGIRAAWGSSLDGSQEDIPYTSTDKMNVIHNPRVGVNGVRAHILDDESESENEFVDSRSLMPGIAAGRRRPLGGGTLAGIRAAWGNSMGESQDDIACPSPATSNTRLNSRAGVVYSRGGDRYASGHVVRGQPMPAGMRNGRGQPGLGIDEDDVIGYHVASGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXVRNTRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYYGSNKAVSATRRRSRSEPRAVKGSSSMGRVKAPGNGAVVGRVRDHANAAAGHERSSGGGGRGTAGSDTRGQRSKAAGGAGGQRDSSGRHTSKGA 1803
BLAST of mRNA_E-siliculosus-1a_F_contig148.2806.1 vs. uniprot
Match: D8LBH7_ECTSI (Chitin synthase 1, chs-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBH7_ECTSI) HSP 1 Score: 914 bits (2363), Expect = 2.470e-309 Identity = 446/468 (95.30%), Postives = 454/468 (97.01%), Query Frame = 1
Query: 25 MTETMWEWDGPESEQLRPRARNNSDEDDDGERGMPLPPMSPLWREHGKGQGGGGIHIVVCCCNETQEELKVMLSTFRTDATASCSVRISFVLDPRGPAEASSETDEVLKRLLRVTDESATEVAGCTHHSGTLDKTLIPFDLYVKGPSLPVGKRNSLVTFFNDILPVKMSRGEAVEPDVVYLLDADSGHPVNGLEDLESMWRLLMAEEEVACVTCPVRPVHPMESFLAASQSLEFALWDNVGESHFGVQTTCRGAQCMFKYRCLVEDGRLAQPPVGEGAMPPLLNSFSKTAAGLPALMRVLIPRLLDSSPNEGLLVLLRQRGFDVRSCGTADGVTCVPCSWIEFYAQRRRWYAGSLVAVSSHLTGKESYFQTEWHRWIISSYAFVANLFLHSGLALMPVLLAKGIHRLVLYDESRGESDDEWNNEWSEWQEESTDDDIDRHTNLEWIIFALVWGFLLLNVGVYLTRSQD 1428
M ETMWEWDGPESE+LRPRARNNSDEDDDGERGMPLPPMSPLWREHGKGQGGGGIHIVVCCCNETQEELKVMLSTFRTDATASC VRISFVL+PRG AEASSETDEVLKRLLRVTDESATEV+GC HHSGTLDKTLIPFDLYVKGPSLPVGKRNSLVTFFNDILPVKMSRGEAVEPDVVYLLDADSGHPVNGLEDLESMWRLLMAEEEVACVTCPVRPVHPMESFLAASQSLEFALWDNVGESHFGVQTTCRGAQCMFKYRCLVEDGRLAQPPVGEGAMPPLLNSFSKTAAGLPAL+ LLDSSPNEGLLVLLRQRGFDVRSCGTADGVTCVPCSWIE YAQRRRWYAGSLVAVSSHLTGKESYFQ EWHRWIISSYAFVAN+FLHSGLALMPVLLAKGIHRLVLYDESRGESDDEWNNEWS WQEES DDDIDRHTNL+WI+FALVWGFLLLNVGVYLTRSQ+
Sbjct: 1 MAETMWEWDGPESERLRPRARNNSDEDDDGERGMPLPPMSPLWREHGKGQGGGGIHIVVCCCNETQEELKVMLSTFRTDATASCPVRISFVLEPRGAAEASSETDEVLKRLLRVTDESATEVSGCIHHSGTLDKTLIPFDLYVKGPSLPVGKRNSLVTFFNDILPVKMSRGEAVEPDVVYLLDADSGHPVNGLEDLESMWRLLMAEEEVACVTCPVRPVHPMESFLAASQSLEFALWDNVGESHFGVQTTCRGAQCMFKYRCLVEDGRLAQPPVGEGAMPPLLNSFSKTAAGLPALI------LLDSSPNEGLLVLLRQRGFDVRSCGTADGVTCVPCSWIELYAQRRRWYAGSLVAVSSHLTGKESYFQAEWHRWIISSYAFVANVFLHSGLALMPVLLAKGIHRLVLYDESRGESDDEWNNEWSAWQEESADDDIDRHTNLDWIVFALVWGFLLLNVGVYLTRSQE 462
BLAST of mRNA_E-siliculosus-1a_F_contig148.2806.1 vs. uniprot
Match: D8LBH6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBH6_ECTSI) HSP 1 Score: 767 bits (1980), Expect = 6.040e-249 Identity = 681/735 (92.65%), Postives = 688/735 (93.61%), Query Frame = 1
Query: 3418 SQAAINTMLNARVGATSIRSQRDAIGSGFANVGNRRRPPSTGTLAGIRAAWGTSMGGSQDDIACPLPETN-STRNSRVGAVYATGIIEEDEESESEMEEVDPRLFVPGVQGNRRRALSAGTLAGIRAAWGSSLDDSQEDIPYTSTDKMNVIHNPRVGVNSVRAHILDDESESENEFVDSRSLMPGIAAGRRRPLGGGTLAGIRAAWGNSMGESQDDIACPSPATVNARLNSRAGVVYSRGGDRYASGHVVRGQPMPAGMRNGRGQAGLGIDQDDVIGYHSTSGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSGRAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGSNKAVSATRRHSRSEPRAVEGSGSMGRVKVAGNGAVVGRVRDHANAAAGHERGSGGGGRDTAGSDTRGQRSKATGGAGGRRXXXXXXTNKSVXXXXXXXXXXSSTGGGTGIVKPAATRRTWEPGQSSVFDSSGSENSDGEGKPRGLRGVQVLDPETPGTDVVSSTGSATIGAGGVSASSSGVWGGRAHDNVVDDDPSRVLGAGVSTSSLRSFPGQEATGGSA 5619
SQAAINT LNARVGATSIRSQRDAIGSGFA+VGNRRRPPSTGT+AGIRAAWGTSMGGS DDIACPLPETN S RNSRVGAVYATGIIEEDEESESEMEEVDPRLF+PGVQGNRRRALSAGTLAGIRAAWGSSLDDSQEDIPYTSTDK+NVIHNPRVGVNSVRAHILDDESESENEFVDSRSLMPGIAAGRRRPLGGGTLAGIRAAWGNSMGESQDDIACPSPATVNARLNSRAGVVYSRG DRYASGHVV GQPMPAGMRNGRGQ GLGIDQ DVI YHSTSGR XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGSNKAVSATRRHSRSEPRAVEGSGSMGRVKVAGNGAVVGRVRDHANAAAGHERGSGGGGR TAGSDTRGQRSKA GGAGG+R XXXXX XXXXXXXXXX GG GIVKPAATRRTWEPGQSSVFDSSGSENSDG+GKPRGLRGVQVLDPETPGTDVVSSTGSATI GGVSASSSG WGGRAHD+VVDDD SRVLGAGVS SSLRSFPGQEA GGSA
Sbjct: 8 SQAAINTKLNARVGATSIRSQRDAIGSGFADVGNRRRPPSTGTMAGIRAAWGTSMGGSLDDIACPLPETNNSMRNSRVGAVYATGIIEEDEESESEMEEVDPRLFIPGVQGNRRRALSAGTLAGIRAAWGSSLDDSQEDIPYTSTDKINVIHNPRVGVNSVRAHILDDESESENEFVDSRSLMPGIAAGRRRPLGGGTLAGIRAAWGNSMGESQDDIACPSPATVNARLNSRAGVVYSRGSDRYASGHVVHGQPMPAGMRNGRGQPGLGIDQHDVIDYHSTSGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRNARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGSNKAVSATRRHSRSEPRAVEGSGSMGRVKVAGNGAVVGRVRDHANAAAGHERGSGGGGRGTAGSDTRGQRSKAAGGAGGQRDXXXXXXXXXXXXXXXXXXXXXXXXGGAGIVKPAATRRTWEPGQSSVFDSSGSENSDGDGKPRGLRGVQVLDPETPGTDVVSSTGSATIRTGGVSASSSGGWGGRAHDSVVDDDGSRVLGAGVSRSSLRSFPGQEANGGSA 739 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig148.2806.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig148.2806.1 >prot_E-siliculosus-1a_F_contig148.2806.1 ID=prot_E-siliculosus-1a_F_contig148.2806.1|Name=mRNA_E-siliculosus-1a_F_contig148.2806.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=1911bp MTETMWEWDGPESEQLRPRARNNSDEDDDGERGMPLPPMSPLWREHGKGQback to top mRNA from alignment at E-siliculosus-1a_F_contig148:63865..78700+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig148.2806.1 ID=mRNA_E-siliculosus-1a_F_contig148.2806.1|Name=mRNA_E-siliculosus-1a_F_contig148.2806.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=14836bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig148:63865..78700+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig148:63865..78700+ >mRNA_E-siliculosus-1a_F_contig148.2806.1 ID=mRNA_E-siliculosus-1a_F_contig148.2806.1|Name=mRNA_E-siliculosus-1a_F_contig148.2806.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=11466bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig148:63865..78700+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |