mRNA_E-siliculosus-1a_F_contig1479.2795.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1479.2795.1
Unique NamemRNA_E-siliculosus-1a_F_contig1479.2795.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1479.2795.1 vs. uniprot
Match: A0A6H5LBY7_9PHAE (Fe/B12 periplasmic-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LBY7_9PHAE)

HSP 1 Score: 708 bits (1828), Expect = 1.230e-252
Identity = 358/386 (92.75%), Postives = 359/386 (93.01%), Query Frame = 1
Query:   73 MPAQRDDGLRVVSLLPSLTEIVCAIGGGLEEHLVGVTHECDHPPAVVARCERVTNSEINPHKMSQEEIDRRVRGSMRMGHSLYGLDEGRLKAADPTVVFTQALCDVCAPSFPMVLSTCARVLGDNPRIVSIEPGSVAEVIDSVRLVGRETGFTEEGIAEARRLEAGFDKIRSVVTKLESTLATAAPAPAALGXXXXXXXXXXXXXGGVGSVRKKQKVAFLEWLEPLFNGGHWVPDLVRAAGGEYTMAEPGNKSMGMSAKELTDYDADVILVAPCGMDRNRAKSDGEQMWRHDWWRELRAVKDGKVYALDGNAYYARPGPRLLQGCGIIARLLHGDAAGDEIGEDIAPRDSWFIITAPPPTQKKQKDVCPERGADADAASGTVPLAS 1230
            MPAQRDDGLRVVSLLPSLTEIVCAIGGGLE HLVGVTHECDHPPAVVARCERVTNSEINPHKMSQEEIDRRVRGSMRMGHSLYGLDEGRLKAADPTVVFTQALCDVCAPSFPMVLSTCARVLGDNPRIVSIEPGSVAEVIDSVRLVGRETGF EEGIAEARRLEAGFDKIRSVV KLESTLATA        XXXXXX       GG  SV KKQKVAFLEWLEPLFNGGHWVPDLVRAAGGEYTMAEPGNKSMGMSAKEL DYDAD+ILVAPCGMDRNRAKSDGEQMWRHDWWRELRAVKDGKVYALDGNAYYARPGPRLLQGCGIIARLLHGDAAGD IGEDIAPRDSWFIITAP P QKKQK VCPERGADADAASGT PLAS
Sbjct:    1 MPAQRDDGLRVVSLLPSLTEIVCAIGGGLEAHLVGVTHECDHPPAVVARCERVTNSEINPHKMSQEEIDRRVRGSMRMGHSLYGLDEGRLKAADPTVVFTQALCDVCAPSFPMVLSTCARVLGDNPRIVSIEPGSVAEVIDSVRLVGRETGFAEEGIAEARRLEAGFDKIRSVVAKLESTLATAXXXXXXXXXXXXXXGVVGVAPGGASSVPKKQKVAFLEWLEPLFNGGHWVPDLVRAAGGEYTMAEPGNKSMGMSAKELMDYDADIILVAPCGMDRNRAKSDGEQMWRHDWWRELRAVKDGKVYALDGNAYYARPGPRLLQGCGIIARLLHGDAAGDAIGEDIAPRDSWFIITAPAPAQKKQKHVCPERGADADAASGTAPLAS 386          
BLAST of mRNA_E-siliculosus-1a_F_contig1479.2795.1 vs. uniprot
Match: A0A835YMX1_9STRA (Periplasmic binding protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMX1_9STRA)

HSP 1 Score: 376 bits (966), Expect = 1.000e-122
Identity = 189/357 (52.94%), Postives = 244/357 (68.35%), Query Frame = 1
Query:   97 LRVVSLLPSLTEIVCAIGGGLEEHLVGVTHECDHPPAVVARCERVTNSEINPHKMSQEEIDRRVRGSMRMGHSLYGLDEGRLKAADPTVVFTQALCDVCAPSFPMVLSTCARVLGDNPRIVSIEPGSVAEVIDSVRLVGRETGFTEEGIAEARRLEAGFDKIRSVVTKLESTLATAAPAPAALGXXXXXXXXXXXXXGGVGSVRKKQKVAFLEWLEPLFNGGHWVPDLVRAAGGEYTMAEPGNKSMGMSAKELTDYDADVILVAPCGMDRNRAKSDGEQMWRHDWWRELRAVKDGKVYALDGNAYYARPGPRLLQGCGIIARLLHGDAAGDEIGEDIAPRDSWFIITAPPPTQKKQK 1167
            +R+ SLLPSLTE+V  I   L   LV VTHECD+PP VV RC R+T S INP K++Q EID+RV+GS+ +GHSLYG+D+ +L+ ADPTVV TQALCDVCA S+P+V+  CARVLGD+PR++SIEP  +++VI SVR VGRE G  EE    AR LEAGF+KI++ V  L        P P++                   +VR    +      +PLFNGGHWVPDL+  AG +Y +A+   +S+ ++ + L   D D+ILVAPCG D  RA  D + +W+HDWW +LRAV+DGKVYA+DGNAYYARPGPRLLQGCGIIARL+HG + G  +GE++APR  W  + AP   Q + K
Sbjct:    6 IRIASLLPSLTEVVACIPS-LRNSLVAVTHECDYPPEVVERCTRITTSHINPAKLTQAEIDKRVKGSLAVGHSLYGIDQDKLREADPTVVLTQALCDVCAVSYPIVVGVCARVLGDHPRVISIEPTCLSDVIASVRTVGRECGAEEEADEVARGLEAGFEKIKAAVKGLPR------PKPSSC------------------NVRDSCNLLL---ADPLFNGGHWVPDLLDIAGADYRLAKTKERSIQITPETLAASDPDIILVAPCGFDSTRAHDDAQHLWQHDWWTQLRAVRDGKVYAMDGNAYYARPGPRLLQGCGIIARLIHGKSVGQTLGEELAPRH-WKQVQAPSAAQLQAK 333          
BLAST of mRNA_E-siliculosus-1a_F_contig1479.2795.1 vs. uniprot
Match: A0A7S4KA17_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4KA17_9STRA)

HSP 1 Score: 286 bits (732), Expect = 3.010e-84
Identity = 154/384 (40.10%), Postives = 225/384 (58.59%), Query Frame = 1
Query:   49 SASCQSTGMPAQRDDGLRVVSLLPSLTEIVCAIGGGLEEHLVGVTHECDHPPAVVARCER-----VTNSEINPHKMSQEEIDRRVRGSMRMGHSLYGLDEGRLKAADPTVVFTQALCDVCAPSFPMVLSTCARVLGD---------------NPRIVSIEPGSVAEVIDSVRLVGRETGFTEEGIAEARRLEAGFDKIRSVVTKLESTLATAAPAPAALGXXXXXXXXXXXXXGGVGSVRKKQKVAFLEWLEPLFNGGHWVPDLVRAAGGEYTM-AEPGNKSMGMSAKELTDYDADVILVAPCGMDRNRAKSDGEQMWR-HDWWRELRAVKDGKVYALDGNAYYARPGPRLLQGCGIIARLLHGDAAGDEIGEDIAPRDSWFII 1134
            S++C ST  P       R+VSLLPS+TEI+C +G  LE+++VGVTH CD+PP++  R  R     VT S+++P+ MSQ EI+ RV GS+R G SLYGL+   L+   PT++FTQ+LCDVCA S+P+V+  CA++LG                NP+++S+EP ++ E + +  +     G T+     ARR E     IR+ +     T+  AA                          R + +VAFLEW +P+F GGHW+PD++  AG EY    + G +S+G++ +   ++D D IL+ PCG    R   D  Q+ R   WW+E+ AV++G VYALDGN+YYARPGPRLLQG GI+A  +HG+    E+GE++ P + +  I
Sbjct:   19 SSACSSTSSPPPSP---RIVSLLPSITEILCELG--LEDYIVGVTHCCDYPPSLFERTSRPPPRVVTRSDVDPYSMSQSEINERVCGSLRNGQSLYGLNGTALREICPTIIFTQSLCDVCAVSYPVVIDACAKLLGGGEXXXXXXXXDGERLNPKVISMEPTTLKETLRTFHVAAEAVGLTDA----ARRAEEITSHIRAGL----ETIRNAADG------------------------RPRPRVAFLEWHDPIFAGGHWIPDMLDMAGAEYVFPVKSGERSVGVADEHFVEFDPDFILIGPCGFGLERTVKDTLQLARTKPWWKEMSAVREGNVYALDGNSYYARPGPRLLQGTGIMAACIHGEETAKELGEELCPTEGYCQI 365          
BLAST of mRNA_E-siliculosus-1a_F_contig1479.2795.1 vs. uniprot
Match: A0A7S2T5Q4_9CHLO (Hypothetical protein n=2 Tax=Chloropicon primus TaxID=1764295 RepID=A0A7S2T5Q4_9CHLO)

HSP 1 Score: 255 bits (652), Expect = 4.130e-76
Identity = 151/358 (42.18%), Postives = 209/358 (58.38%), Query Frame = 1
Query:   97 LRVVSLLPSLTEIVCAIGGGLEEHLVGVTHECDHPPAVVARCERVTNSEINPHKMSQEEIDRRVRGSMRMGHSLYGLDEGRLKAADPTVVFTQALCDVCAPSFPMVLSTCARVLGDNP-RIVSIEPGSVAEVIDSVRLVGRETGFTEEGIAEARRLEAGFDKIR-SVVTKLESTLATAAPAPAALGXXXXXXXXXXXXXGGVGSVRKKQKVAFLEWLEPLFNGGHWVPDLVRAAGGEYTMAEPGNKSMGMSAKELTDYDADVILVAPCGMDRNRAKSDGEQMW------RHDWWRELRAVKDGKVYALDGNAYYARPGPRLLQGCGIIARLLHGDAAGDEIGEDIAPRDSWFIITAPP 1146
            +RVVSLLPSLTEIV  +G G  E LVG+THECD PP VV   + VT S ++P K SQ EI+ RV  S+   +SLY L EG  + A PT V TQ+LCDVCA +F  V S C+R+L D+P +++S+EP ++ +V DS+++VG     +   I EA    A FD+ R SV  ++   L                              R++ KVA LEW +PLF GGHW+ ++V  AGG Y +  PG +S  M+  +L  YD DVI++APCG D +R + D +++         +WW  LRAV++ +VYA DGN Y++RP PRL++G  I+A +LHG A     GE+ A    W  +  PP
Sbjct:   16 VRVVSLLPSLTEIVAQLGKG--EQLVGITHECDFPPDVVMGKKVVTESFVDP-KASQREINDRVVESLAQNNSLYALREGAFRDARPTHVLTQSLCDVCAVNFEQVKSKCSRLLADDPYKLLSVEPQTLRDVRDSIQVVGASLDCSRAAIDEAL---ARFDEGRASVRERVHRRLD-----------------------------RRRPKVALLEWFDPLFTGGHWIHEMVEDAGGSYGLTRPGERSAVMTRSDLAAYDPDVIVLAPCGFDLDRCERDAKKILYDPEGEHFEWWSGLRAVRESEVYACDGNQYFSRPSPRLVEGIEILAEVLHGVATTPR-GEEGA---RWRRLELPP 334          
BLAST of mRNA_E-siliculosus-1a_F_contig1479.2795.1 vs. uniprot
Match: A0A7R9WK88_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WK88_9STRA)

HSP 1 Score: 241 bits (616), Expect = 2.170e-71
Identity = 134/317 (42.27%), Postives = 186/317 (58.68%), Query Frame = 1
Query:  148 GGGLEEHLVGVTHECDHPPAVVARCERVTNSEINPHKMSQEEIDRRVRGSMRMGHSLYGLDEGRLKAADPTVVFTQALCDVCAPSFPMVLSTCARVL-------GDNPRIVSIEPGSVAEVIDSVRLVGRETGFTEEGIAEARRLEAGFDK-IRSVVTKLESTLATAAPAPAALGXXXXXXXXXXXXXGGVGSVRKKQKVAFLEWLEPLFNGGHWVPDLVRAAGGEYTMAEPGNKSMGMSAKELTDYDADVILVAPCGMDRNRAKSDGEQMWRHD----WWRELRAVKDGKVYALDGNAYYARPGPRLLQGCGIIAR 1062
            G GL E +VGVTH CD+P + +     VT S++ P  +SQ+EI  RV G++R G SLY LDE  LK   PT +FTQ+LCD+CA S P+V +TCAR+         D  +IVS+EP S+ +V +++R+ GR  G      A+A  +  G+ K ++ V T +E  L T A                           KK KVAFLEW EP   GGHW+ D++  AGG YT+ + G +S  ++ ++L  Y+ DVIL+ PCG    RA +D   +  H      W+ LRAV+D KV+ALDGN+YYARPGPRL+QG G++A+
Sbjct:    5 GLGLSEKIVGVTHCCDYPTSALRNAVVVTTSDVRPALLSQDEIHLRVSGALRKGDSLYALDEEALKLIKPTHIFTQSLCDICAVSAPLVNNTCARIFPTKQEDGSDKTKIVSLEPQSLNDVWETIRVAGRVLGVE----AKAEEMIGGYVKDLQEVQTIVEGYLKTNAHI-------------------------KKPKVAFLEWHEPFVTGGHWIADMMEIAGGRYTLNKTGCRSECITDEQLVQYNPDVILIGPCGFSVERATNDTLPLLNHSKRGPLWKNLRAVQDEKVFALDGNSYYARPGPRLVQGTGLMAK 292          
BLAST of mRNA_E-siliculosus-1a_F_contig1479.2795.1 vs. uniprot
Match: A0A7S4V8M0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4V8M0_9STRA)

HSP 1 Score: 247 bits (631), Expect = 1.570e-70
Identity = 139/377 (36.87%), Postives = 203/377 (53.85%), Query Frame = 1
Query:  127 TEIVCAIGGGLEEHLVGVTHECDHPPAVVA--RCERVTNSEINPHKMSQEEIDRRVRGSMRMGHSLYGLDEGRLKAADPTVVFTQALCDVCAPSFPMVLSTCARVLGD--------------------------------NPRIVSIEPGSVAEVIDSVRLVGRETGFTEEGIAEARR----LEAGFDKIRSVVTKLESTLATAAPAPAALGXXXXXXXXXXXXXGGVGSVRKKQKVAFLEWLEPLFNGGHWVPDLVRAAGGEYTM-AEPGNKSMGMSAKELTDYDADVILVAPCGMDRNRAKSDGEQMW-RHDWWRELRAVKDGKVYALDGNAYYARPGPRLLQGCGIIARLLHGDAAGDEIGEDIAPRDSWFIIT 1137
            TEI+C +G  L  ++VG+THECD+P  + +  R   VT S+INP  M+Q EI   V GS+  G SLYG+++G L+   P ++FTQ+LCDVCA S+P+VLSTCA++LG                                 +P+++S+EP ++ + +D+  +  +  G + E I  A      +E+G ++IR  V                                      KK +VAF+EW +P+F GGHW+ D++  A G+Y M  E   +S+ MS ++    D DVIL+ PCG D  R   D  +++   DWW  LRAVK+G+V+A D N+YYARPGPRLLQG GI+A  +HGD   D + ED+ P   +  IT
Sbjct:    1 TEILCKLG--LSSNIVGITHECDYPTELTSSGRARVVTTSDINPRTMTQSEIHEAVCGSLTNGQSLYGINKGVLQDVKPDIIFTQSLCDVCAVSYPVVLSTCAKLLGGPKANVEESDEKGVVEKGSSSCHLSLKDTTTGLDPKVISMEPENLKDTLDTFHVAAKAIG-SPEVIKRANEVTSSIESGLNRIRQAVKGC-----------------------------------KKPRVAFIEWHDPIFCGGHWIVDMLDIARGDYVMPVEYAGRSIAMSNEDFIKLDPDVILIGPCGFDLARTVKDTIEIFGTKDWWLNLRAVKEGRVFAADANSYYARPGPRLLQGTGIMAAAMHGDNIMDSLDEDLVPASGYCQIT 339          
BLAST of mRNA_E-siliculosus-1a_F_contig1479.2795.1 vs. uniprot
Match: A0A2V8LSY1_9BACT (Cobalamin-binding protein n=2 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8LSY1_9BACT)

HSP 1 Score: 223 bits (568), Expect = 4.330e-64
Identity = 123/333 (36.94%), Postives = 186/333 (55.86%), Query Frame = 1
Query:   97 LRVVSLLPSLTEIVCAIGGGLEEHLVGVTHECDHPPAVVARCERVTNSEINPHKMSQEEIDRRVRGSMRM--GH-SLYGLDEGRLKAADPTVVFTQALCDVCAPSFPMVLSTCARVLGDNPRIVSIEPGSVAEVIDSVRLVGRETGFTEEGIAEARRLEAGFDKIRSVVTKLESTLATAAPAPAALGXXXXXXXXXXXXXGGVGSVRKKQKVAFLEWLEPLFNGGHWVPDLVRAAGGEYTMAEPGNKSMGMSAKELTDYDADVILVAPCGMDRNRAKSDGEQMWRHDWWRELRAVKDGKVYALDGNAYYARPGPRLLQGCGIIARLLHGDAAG 1086
            +R+VSLLPS TEIVCA+G  LE+ LVG+THECD+PP+V  +  R+T+S+I+   M+  EID  VR  +    GH S+Y LDE RL+   P ++ TQ LC+VCA S+  V    AR+      +VS+EP ++A++ D++R VG+ TG   +     R L A  D IR     +E                                  ++ +   LEWLEP F  GHWVP+ V  AGG++   + G +S+  +A+E+  Y  +VI++ PCG  +             + W +L AV++G+V+A D +AY++RPGPR+++G  I+A +LH +  G
Sbjct:    1 MRIVSLLPSATEIVCALG--LEDGLVGITHECDYPPSVAGK-PRLTSSQISHETMTSAEIDHAVRSQLAQLDGHGSIYHLDEARLRELKPDLILTQELCEVCAVSYKTV-QRAARMFEAEVTVVSLEPNTIADIFDNIRTVGKLTGCESDADDLIRSLSARLDHIREETADIE----------------------------------RRPRTLMLEWLEPPFAPGHWVPEQVAIAGGDHAFGKSGQRSVTTNAEEIVAYSPEVIVLIPCGYYKEDVLRQLPSARLPEGWNDLPAVRNGEVWATDASAYFSRPGPRVVEGAEILANILHPEIFG 295          
BLAST of mRNA_E-siliculosus-1a_F_contig1479.2795.1 vs. uniprot
Match: A0A7C2DJX0_9FIRM (Cobalamin-binding protein n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A7C2DJX0_9FIRM)

HSP 1 Score: 223 bits (567), Expect = 7.240e-64
Identity = 126/329 (38.30%), Postives = 188/329 (57.14%), Query Frame = 1
Query:   97 LRVVSLLPSLTEIVCAIGGGLEEHLVGVTHECDHPPAVVARCERVTNSEINPHKMSQEEIDRRVRGSMRMGHSLYGLDEGRLKAADPTVVFTQALCDVCAPSFPMVLSTCARVLGDNPRIVSIEPGSVAEVIDSVRLVGRETGFTEEGIAEARRLEAGFDKIRSVVTKLESTLATAAPAPAALGXXXXXXXXXXXXXGGVGSVRKKQKVAFLEWLEPLFNGGHWVPDLVRAAGGEYTMAEPGNKSMGMSAKELTDYDADVILVAPCGMDRNRAKSDGEQMWRHDWWRELRAVKDGKVYALDGNAYYARPGPRLLQGCGIIARLLHGDAA 1083
            LR+VSLLPS TEIVCA+G  L + LVG++H+CD+PP V+ R   V +  +   ++    I+  +RG +  G S+Y LD   L A  PT++ TQ LC VCAPS+ +V    AR+L    R+VS+EP ++AEV++++RLVG  TG      A A  L AG + +R+ V                                     R + +VA LEWL+PL+  GHWVP++V AAGGE  +  PG  +  +S   +     +V+++ PCG D  R + +   + R   W E+ AV+ G+VYA++G+A++ RPGPR+++G  I+A LLH +AA
Sbjct:    4 LRIVSLLPSATEIVCALG--LADALVGISHDCDYPPEVLDR--PVLSQAVVGPELPSGAIEETIRGQVHRGLSVYHLDADTLAALRPTLILTQELCRVCAPSYTLVREA-ARILEGEVRLVSLEPRTLAEVLETIRLVGELTGRQGRAEALAAGLRAGLETVRAQVAG-----------------------------------RPRPRVACLEWLDPLYAAGHWVPEMVAAAGGEDVLGRPGEHARVVSWDAVRAAAPEVLVLMPCGFDVPRTRRETALVARRAGWGEVPAVRAGRVYAVNGSAFFNRPGPRIVRGVEILAGLLHPEAA 292          
BLAST of mRNA_E-siliculosus-1a_F_contig1479.2795.1 vs. uniprot
Match: UPI0018A8316F (cobalamin-binding protein n=1 Tax=Nonomuraea cypriaca TaxID=1187855 RepID=UPI0018A8316F)

HSP 1 Score: 221 bits (563), Expect = 1.830e-63
Identity = 126/333 (37.84%), Postives = 179/333 (53.75%), Query Frame = 1
Query:   97 LRVVSLLPSLTEIVCAIGGGLEEHLVGVTHECDHPPAVVARCERVTNSEINPHKMSQEEIDRRVRGSMRMGHSLYGLDEGRLKAADPTVVFTQALCDVCAPSFPMVLSTCARVLGDNPRIVSIEPGSVAEVIDSVRLVGRETGFTEEGIAEARRLEAGFDKIRSVVTKLESTLATAAPAPAALGXXXXXXXXXXXXXGGVGSVRKKQKVAFLEWLEPLFNGGHWVPDLVRAAGGEYTMAEPGNKSMGMSAKELTDYDADVILVAPCGMDRNRAKSDGEQMWRHDWWRELRAVKDGKVYALDGNAYYARPGPRLLQGCGIIARLLHGDAAGDEI 1095
            +R++SLLP+ T+IV  +G G +  LVG THECD P  +VA    VT +E +  +MS  EI   V G+   G SLY LD  RL    P VV TQ LCDVCA S+  V S   R+L   PR++S+EP ++ +V+  V  VG   G  E      R LE   + +R +V                                     R + +VA +EWL+PL+  GHWVP+ +R AGGE  +AE G  +  +  + + +   DVIL+ PCG    R +S+  ++ R   W EL AV+ G V+ LDG AY+ RPGPR+++G  ++A +LHG  AGD++
Sbjct:    1 MRILSLLPAATDIVAELGLGGD--LVGRTHECDWPADLVASVPVVTAAEFSADRMSSREISDAVGGAAHQGSSLYTLDVERLAELAPDVVLTQDLCDVCAVSYTGV-SAAVRLLDAGPRVISLEPRTLPDVLGCVERVGEVLGVPEVAARRVRELEERLETVRELVAD-----------------------------------RPRPRVAAIEWLDPLWPAGHWVPEQIRCAGGEPLLAEAGEHTSPIGWERVRESRPDVILLLPCGFPPERTESEWRELTRLPGWAELPAVRAGAVWVLDGPAYFNRPGPRVVRGAEVLAHVLHGVRAGDQV 295          
BLAST of mRNA_E-siliculosus-1a_F_contig1479.2795.1 vs. uniprot
Match: A5UXV3_ROSS1 (Periplasmic binding protein n=1 Tax=Roseiflexus sp. (strain RS-1) TaxID=357808 RepID=A5UXV3_ROSS1)

HSP 1 Score: 220 bits (561), Expect = 2.900e-63
Identity = 129/325 (39.69%), Postives = 173/325 (53.23%), Query Frame = 1
Query:   97 LRVVSLLPSLTEIVCAIGGGLEEHLVGVTHECDHPPAVVARCERVTNSEINPHKMSQEEIDRRVRGSMRMGHSLYGLDEGRLKAADPTVVFTQALCDVCAPSFPMVLSTCARVLGDNPRIVSIEPGSVAEVIDSVRLVGRETGFTEEGIAEARRLEAGFDKIRSVVTKLESTLATAAPAPAALGXXXXXXXXXXXXXGGVGSVRKKQKVAFLEWLEPLFNGGHWVPDLVRAAGGEYTMAEPGNKSMGMSAKELTDYDADVILVAPCGMDRNRAKSDGEQMWRHDWWRELRAVKDGKVYALDGNAYYARPGPRLLQGCGIIARLLH 1071
            +R+VSLLPS TEIVCA+G  L + L GV+HECD+PP VVA   RVT+S I PH ++  EIDR V   +  G SLY LDE  L    P +V TQ LCDVCA SF  V S  AR+ G NPRIVS+ P ++  + + V  +    G  E G     RL    D++R  V           P P                            V  LEWL+P F GGHWVP+++  AGG   +   G +S  +  +++     DVIL+ PCG     A+ + + + R   W ++ A + G+VYALD N Y +RP PR+++G   +ARLLH
Sbjct:    1 MRIVSLLPSATEIVCALG--LADMLAGVSHECDYPPDVVADLPRVTSSAI-PHGLTSAEIDRVVSARLARGESLYLLDESLLAELQPDLVITQELCDVCAVSFADVCSLAARLPG-NPRIVSLAPPNLDGIFNDVLTIAEAVGMPERGRRLNERLRQRLDRVRRTVA--------GQPRPG---------------------------VVALEWLDPPFVGGHWVPEMIDLAGGRDLLGRAGERSFRVRWEDVIGAQPDVILLIPCGYSAEAAQQEWDALPRPPGWFDIPAARAGRVYALDANGYCSRPAPRVVEGIEHLARLLH 286          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1479.2795.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LBY7_9PHAE1.230e-25292.75Fe/B12 periplasmic-binding domain-containing prote... [more]
A0A835YMX1_9STRA1.000e-12252.94Periplasmic binding protein n=1 Tax=Tribonema minu... [more]
A0A7S4KA17_9STRA3.010e-8440.10Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S2T5Q4_9CHLO4.130e-7642.18Hypothetical protein n=2 Tax=Chloropicon primus Ta... [more]
A0A7R9WK88_9STRA2.170e-7142.27Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
A0A7S4V8M0_9STRA1.570e-7036.87Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
A0A2V8LSY1_9BACT4.330e-6436.94Cobalamin-binding protein n=2 Tax=Acidobacteria ba... [more]
A0A7C2DJX0_9FIRM7.240e-6438.30Cobalamin-binding protein n=1 Tax=Firmicutes bacte... [more]
UPI0018A8316F1.830e-6337.84cobalamin-binding protein n=1 Tax=Nonomuraea cypri... [more]
A5UXV3_ROSS12.900e-6339.69Periplasmic binding protein n=1 Tax=Roseiflexus sp... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1479contigE-siliculosus-1a_F_contig1479:23797..29264 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size1164
Model size1904
Exons7
Ec32 orthologEc-20_003540.1
Ec32 ortholog descriptionABC transporter periplasmic binding domain
Hectar predicted targeting categoryother localisation
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
EggNOG OGs2CTC6@1,2S4BH@2759
Preferred nameC1orf53
Seed eggNOG ortholog2880.D8LBW6
Seed ortholog evalue1.1e-209
Seed ortholog score735.7
Taxonomic scopeEukaryota
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927987.9592226-UTR-E-siliculosus-1a_F_contig1479:23796..238681622927987.9592226-UTR-E-siliculosus-1a_F_contig1479:23796..23868Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1479 23797..23868 +
1696318764.414374-UTR-E-siliculosus-1a_F_contig1479:23796..238681696318764.414374-UTR-E-siliculosus-1a_F_contig1479:23796..23868Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1479 23797..23868 +
1622927988.0622647-UTR-E-siliculosus-1a_F_contig1479:28596..292641622927988.0622647-UTR-E-siliculosus-1a_F_contig1479:28596..29264Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1479 28597..29264 +
1696318764.4855871-UTR-E-siliculosus-1a_F_contig1479:28596..292641696318764.4855871-UTR-E-siliculosus-1a_F_contig1479:28596..29264Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1479 28597..29264 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927987.9710839-CDS-E-siliculosus-1a_F_contig1479:23868..239401622927987.9710839-CDS-E-siliculosus-1a_F_contig1479:23868..23940Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1479 23869..23940 +
1696318764.4232094-CDS-E-siliculosus-1a_F_contig1479:23868..239401696318764.4232094-CDS-E-siliculosus-1a_F_contig1479:23868..23940Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1479 23869..23940 +
1622927987.982651-CDS-E-siliculosus-1a_F_contig1479:24510..246331622927987.982651-CDS-E-siliculosus-1a_F_contig1479:24510..24633Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1479 24511..24633 +
1696318764.431687-CDS-E-siliculosus-1a_F_contig1479:24510..246331696318764.431687-CDS-E-siliculosus-1a_F_contig1479:24510..24633Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1479 24511..24633 +
1622927987.9993107-CDS-E-siliculosus-1a_F_contig1479:25009..251181622927987.9993107-CDS-E-siliculosus-1a_F_contig1479:25009..25118Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1479 25010..25118 +
1696318764.4416234-CDS-E-siliculosus-1a_F_contig1479:25009..251181696318764.4416234-CDS-E-siliculosus-1a_F_contig1479:25009..25118Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1479 25010..25118 +
1622927988.0110433-CDS-E-siliculosus-1a_F_contig1479:25862..259601622927988.0110433-CDS-E-siliculosus-1a_F_contig1479:25862..25960Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1479 25863..25960 +
1696318764.4492793-CDS-E-siliculosus-1a_F_contig1479:25862..259601696318764.4492793-CDS-E-siliculosus-1a_F_contig1479:25862..25960Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1479 25863..25960 +
1622927988.0231342-CDS-E-siliculosus-1a_F_contig1479:26690..270361622927988.0231342-CDS-E-siliculosus-1a_F_contig1479:26690..27036Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1479 26691..27036 +
1696318764.4571147-CDS-E-siliculosus-1a_F_contig1479:26690..270361696318764.4571147-CDS-E-siliculosus-1a_F_contig1479:26690..27036Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1479 26691..27036 +
1622927988.0363393-CDS-E-siliculosus-1a_F_contig1479:27390..275541622927988.0363393-CDS-E-siliculosus-1a_F_contig1479:27390..27554Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1479 27391..27554 +
1696318764.4653192-CDS-E-siliculosus-1a_F_contig1479:27390..275541696318764.4653192-CDS-E-siliculosus-1a_F_contig1479:27390..27554Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1479 27391..27554 +
1622927988.0492449-CDS-E-siliculosus-1a_F_contig1479:28344..285961622927988.0492449-CDS-E-siliculosus-1a_F_contig1479:28344..28596Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1479 28345..28596 +
1696318764.4761088-CDS-E-siliculosus-1a_F_contig1479:28344..285961696318764.4761088-CDS-E-siliculosus-1a_F_contig1479:28344..28596Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1479 28345..28596 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1479.2795.1prot_E-siliculosus-1a_F_contig1479.2795.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1479 23869..28596 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1479.2795.1

>prot_E-siliculosus-1a_F_contig1479.2795.1 ID=prot_E-siliculosus-1a_F_contig1479.2795.1|Name=mRNA_E-siliculosus-1a_F_contig1479.2795.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=388bp
MPAQRDDGLRVVSLLPSLTEIVCAIGGGLEEHLVGVTHECDHPPAVVARC
ERVTNSEINPHKMSQEEIDRRVRGSMRMGHSLYGLDEGRLKAADPTVVFT
QALCDVCAPSFPMVLSTCARVLGDNPRIVSIEPGSVAEVIDSVRLVGRET
GFTEEGIAEARRLEAGFDKIRSVVTKLESTLATAAPAPAALGPPGAAAGV
VGVSPGGVGSVRKKQKVAFLEWLEPLFNGGHWVPDLVRAAGGEYTMAEPG
NKSMGMSAKELTDYDADVILVAPCGMDRNRAKSDGEQMWRHDWWRELRAV
KDGKVYALDGNAYYARPGPRLLQGCGIIARLLHGDAAGDEIGEDIAPRDS
WFIITAPPPTQKKQKDVCPERGADADAASGTVPLASA*
back to top

mRNA from alignment at E-siliculosus-1a_F_contig1479:23797..29264+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1479.2795.1 ID=mRNA_E-siliculosus-1a_F_contig1479.2795.1|Name=mRNA_E-siliculosus-1a_F_contig1479.2795.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=5468bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1479:23797..29264+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CCTTCACCTCCTCTCTCTCTCCCGTCCTTCCCTCTCTCTCTCTCTTTCTC TGCAAGCTGCCAATCTACCGGCATGCCGGCTCAGCGAGATGACGGTCTAC GTGTGGTATCGCTTCTGCCGTCCTTGACGGAGATTGTCTGCGCGGTAAGA GTTTTGACCAAAACATGCGTATAGTCTACTGTACATCCTCTGGTTCCGTG TATGCATGGACCGGCGGGTTCAGACCCGAGAGATCGCGCTCGGAGATTCA ACGATGGCCATGACCTTACATCGAACTCGAGAAGTACTGCACAATAAAGA CCTAGATCTAACGCCAAGGATGCCATGTAGGCAGAGGAAATGATACAATG TACCGCAACAAGAGGTGGCACGGCGAACTTCAAGTTCGTTTAGAGGATGA GAGTATGCGTCAACACTACGGTTGGCTTGCAATGCGTCAACGAGATTGAT TGATGGGATTGAAGAACAGCTATATACTGCACTAGACACTGTATTGTTTG GGGAACTGGCGAGCCGCGTTTGTTTCTCTGCGGGTAAACGAAATGATTGC GCATCCACCAGGTGGGGAATGACACATTTGGTGAATGAACGCAAACACGA AGCACTACACCACAATCACTTTTATGATTTATTTGTTGTCGCCCATACTG CTGTCCTCCCCAACGCCGCGTCCCGAATGCATTGGCACAAACATAAAAAA ACTCTCGTGGGAAGATCGGTGGGGGTCTGGAGGAGCACCTGGTAGGCGTA ACTCACGAGTGTGACCACCCTCCAGCCGTGGTTGCAAGGTGCGAGCGGGT CACGAACTCGGAGATCAACCCTCACAAGATGTCTCAGGTACGCGTGCTTA TACCCGTGGTATCCTCTGCGATAGCTCCCCTTCATGCTGTCGCCCCGAGG TGCTCGAGACTTTTTCGTTAGTCGGGGTTTTTGCTCTTCTGCAAAGCCTT CGCCGATCCTTTCCCCCTCCCTTTGTGCTACAGGGCTTAGGGGTCAAAAG CTCACCCGCTCTCGTGGTTTGAGGGGATTCAACCCCACATATGACGTGGA GAGAATCTCCGGTATGAAGACACTGCCATGTGAGGTGATGGATGCGCCGA CATATCTTTTCTCCGATGGCGACACTGCCTACCATGTTGGCCCTAATGAT AATCCTGGTGTCTCGTGTTACTGAGAGCCACTGGTACGACACAACTTTTT TTGCACCAATCAGGAAGAGATCGACCGCCGCGTTCGGGGGTCCATGAGGA TGGGACACAGCCTGTACGGGCTCGATGAGGGCCGTCTCAAGGCCGCTGAT CCCACCGTCGTATTCACACAAGGTACAGCAGTACGTTGAAACCACCAACA ACATCGGAGGTCCACAAAAATAAGCCAATTCAACGGTGTATTGAAGCCTC AAAGCAAACCATTAGAGGCTTCTATAGGTGCACACCATGTCTCCCATTGC CATCTGCTACGTCAGCGCCGGGATTTTTTGCCGGACCCGGACGTTGATTC CGGTTCAAGGTAACGGTATGCTCCCCTCGCCTGTCCTGAGCGCTCGAAGC TCCCGGGCAAGCATTTGACCGGCACTTGATCGAGTTTAACGTTTTTGTCC CGCACGAGAAAAGTCGTGGTGTAGCTGATGTGACACGCGCGTCCCGGTGG ACCGCCTCCTGTTGGCGCCCAATACCATGGCGCACACTCCGGCCGCTGTT AATCCAATGTCTCTCGGTGTCACGCATCCCATCCAGAGCGCCGCCCAAAT GTTGCTCCCAGCCAGCCCCGTTGAGAGCACCTATGCATACAGTTCTCCAC GCATGCACGCCTTCGCCGTTGCGTTGTAGCGGTAACGCCACCTACGCTGT GGCATGAAGGATTGGCAGTCGCGGCATGTTGGTTACAAGGCCTCGTTTTT ATCGTTTTTTGTACGTCACGAACATTGTTGTGGAGCGTCTTCGGGGTGCT GTAATGATTGGTGGAATCGCGAATACACATCCAAACCTGTTTGAAATCAT GCATTCATTGTACGGGTGGTCACTCCCACCTCCCCCCAACCCTTCCGCCT CCTTGTCTACCGGCAGCTCTGTGCGACGTCTGCGCCCCATCGTTTCCGAT GGTTCTCAGCACCTGCGCTAGGGTTCTCGGCGATAACCCTAGGATCGTAT CCATCGAACCGGGAGTGAGTGACCGAACCCGCGCTGCAGCCGCTCTTCCC TCGCCAGCAGTAGCTCAGGTTCCATCATCAAAGTTGCCCCAGCATGGTAG ACTGCAGCAGCAGCATTGTCCTTCAGTGATAGTTTTTCGAGGGGATGTAT GCTAGGCGGTATTGGGTGTATATCTTCGGCCCCGTACAGTAGTAGGTTCG TTTCGCAGCCCCGTACCGCCGTAGTTTTAGTCCATGCTTGACATGCACCA GTTCCCCCGCCTGTGCTTGTGGGGAAAACAAGCCGCCGTAGTTTTAGTCC AAGCTTGACATGCACCAAGTTCCCCCGCCTGTGCTTGTGGGGAAAACAAG CTTACGGCGCCACACAAAGGGAGCCGGTCCGGGTATTCTGACCGGAATCC CATAAGTTTCCACCGGTCTTAGCGGGCTCCCTCCCTCCCCCGGCCCTCTG CCCTTTTGAGTCATGCTTGAGCCACCTCTAGCCTGGCCAAAGTTCCAAGA CGAAGGTTGTTTTCGGTGTTGGTGAATGAAACTGAAACTGACCGAAAATG GGGGAGGAACAGAACGAGCACGTGATCGTTGGTGAATGAAACTGAAACTG ACCGAAAATGGGGGAGGAACAGAACGAGCACGTGATCGCCCCACCCTTGC GGTATTCTCAAGATGTGATTTTTCTCCCTTGACCTATGTAAACCGTGTCT GTCTTTGTGCCGCTCCCCTCCCGTCGATTTCTTCACCCGAACAGAGCGTG GCGGAAGTCATCGACTCCGTTCGTCTGGTTGGCCGCGAGACCGGTTTCAC GGAAGAGGGGATCGCCGAAGCCAGGCGTCTGGAGGCCGGCTTCGACAAAA TCAGATCGGTCGTCACTAAACTGGAAAGCACCCTTGCCACGGCGGCGCCG GCGCCGGCGGCCCTGGGGCCCCCCGGAGCGGCGGCCGGGGTAGTGGGGGT ATCTCCCGGCGGAGTTGGTTCAGTCCGCAAGAAACAGAAGGTGGCGTTTT TGGAGTGGCTGGAGCCTCTCTTTAACGGAGGCCACTGGGTGCCGGATCTC GTGCGGGCGGCCGGGGGCGAGTACACGATGGCAGAACCCGGTGAGACAAA AAGGATTGAGGCGAGAGTAGCTTCGGGCGCCAAGGCACTCCCGCGACCGC ACATGTAGCTTGTCTAGGTTTGGCTTGGACTGTCTGGGGTATCGAGTCAT GTGCTTGTCCTTCTTGTTCTCATGTGTGTCTTCGCAGTGGCCATCGCCTG GCTCTCCTGCCTTTCCCGCAAGCCCACTAACTATTGTTGTCTTTTTTGGA GAGGTGGACACTTTTGACTGGCTGACATCTATCACTGAAAATAACGTCAC GACAATAAAGTTTTCGTTTCCAACCCCCCGTCGCACCGATGATGCGCACG CGCCCCCCCCTCCTCCATGGGAAACGAAAATGCGGTTGGAAAAGGCAACA AGAGCATGGGCATGTCGGCGAAAGAGCTGACCGACTACGACGCCGACGTC ATCCTCGTCGCTCCCTGCGGCATGGACCGGAACCGAGCCAAGTCCGACGG GGAGCAGATGTGGCGCCACGACTGGTGGCGGGAGCTTAGAGCGGTCAAGG ATGGGAAGGTGGGCGGCAGCAGAACGCAGTAGAACGGGATAAACCGTAGG TTGCATAAGATACCACATCCCCTGGACCGAATTTCAGAGCTCGACTACTC CACAGCCGTGGCGGTGCCGAAAATTGTGGCGTTGGGTCCGGGGTCTCGTC GAGAGCTCTCCGAAATCGTTTATCGTTTGCATGCTGCATGTCGTGGAGTA ATGTAGTCGAACTTTGGAAATCCGTCCAGAGGGTGTGTGGAATCTTGTGG CTCCATGGTACCTCGCACGATGGTGGAGAGGGAATGGCAACGTAGCGATA CAGCAGGCAAGCACCAGCCAGGGCAGGGAGGAGTGACTGACGGAAATTAG AGCAACACCAGCGTGCGTTAAACTGCAGGAGTTGAAGCAGACACCGGTGT ACTTGTGTGTCGTTCGCTTGACCAGAAAGATTTGGCGGCACCATACTGCA ATGGCAACCAATGCTGCTCCGTGCGTTATATCGAAAATGAGTCGCTTTCC CCCGGAGTTTGGATTCCAGCAGTGTGTCGATACGGCAGCAGGGAAATGCG TGCTTGCAATACACTTCTTCACCAGCAGTTTTCATACGAGAAGACGGAGT TCCTGCTCGGCGGCGTGCGACGTCAATCTGTGTACAGTCTCGAAACACCC ACCGAGACCCTGTACGGTTGGGGGGTTCTCACGTGCGACAATCAGGCGTA CTACACCAAACACGGGTCCGGGGTATATCTTTCGTTGTCAACACACCTTT TCTCGCCCCGTACCTTGTTCTGACTGCTGCCTCTTCGGGGGACTTCAGGT GTACGCCTTGGACGGCAACGCCTACTACGCCAGACCGGGTCCCCGGCTAC TGCAAGGTTGTGGTATCATCGCCAGGCTGTTGCACGGGGATGCCGCGGGG GACGAGATTGGAGAGGACATTGCCCCGCGCGACTCGTGGTTCATCATTAC CGCCCCCCCTCCCACTCAGAAGAAACAGAAGGACGTGTGCCCCGAACGGG GCGCTGATGCTGACGCTGCTTCGGGTACGGTGCCACTAGCCTCCGCGTAG TCAGAAGGGACTGGGGTGCACATCGGGAGACAAATCGCGACTGCTGACTA AACTACCCGCGAGCTCAGCAGATGCCCAGAGTTTAGGTTTTTCGGTGGGA TTGTTTTCTCACTTTTTCTGTCTTCCCCTTTTCTCCGACAACAAGCCCTG GTTAAGAAAAGCCCCGTGGAAAAAGCGATATGTATCTCTACGCATCACGG GGAATCACCTTTGCTTTCATGGAGGAGTGTGCTTTGGGGGTGGGGACAGT GGCGAGGGACAAGCTGTCAGCTTCAAAATGCCGTGGGGCCCGCAGGCACC CCAACGTAAGATGCTAAATAAGACTTTCTCCCCACGTAGCAGGTTCTCTT CTTAATTCGATTGCTACGTTGCGCCACATGTCATGTCCAGAACGGCGGTG CAGAGAACAAGAAACCAACAAGAAATTTCCCTTCTCCCTCGGGTTGATTG CCGCCCCACCAGAGTGCGGAAATGGTTCTGAGAGTCGCTTGGTGGTTTGA GACGCCAAGAGGTCATTACTCACGGCTAGAAGTTTCAAGGATGCAGGAAA CACAGCAGGCCAATGTGGCAGCTCGGTGTTCACACTTACGCGTGCCGCTG TCGATGAGCTAAAGGAAAGCTTGGAGAAACGTGCCTCCAACAAGAATCAA GTCGTTGTTGCTGTTGTT
back to top

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1479:23797..29264+

>mRNA_E-siliculosus-1a_F_contig1479.2795.1 ID=mRNA_E-siliculosus-1a_F_contig1479.2795.1|Name=mRNA_E-siliculosus-1a_F_contig1479.2795.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2328bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1479:23797..29264+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGCCGGCTCAGCGAGATGACGGTCTACGTGTGGTATCGCTTCTGCCGTC
CTTGACGGAGATTGTCTGCGCGATGCCGGCTCAGCGAGATGACGGTCTAC
GTGTGGTATCGCTTCTGCCGTCCTTGACGGAGATTGTCTGCGCGATCGGT
GGGGGTCTGGAGGAGCACCTGGTAGGCGTAACTCACGAGTGTGACCACCC
TCCAGCCGTGGTTGCAAGGTGCGAGCGGGTCACGAACTCGGAGATCAACC
CTCACAAGATGTCTCAGATCGGTGGGGGTCTGGAGGAGCACCTGGTAGGC
GTAACTCACGAGTGTGACCACCCTCCAGCCGTGGTTGCAAGGTGCGAGCG
GGTCACGAACTCGGAGATCAACCCTCACAAGATGTCTCAGGAAGAGATCG
ACCGCCGCGTTCGGGGGTCCATGAGGATGGGACACAGCCTGTACGGGCTC
GATGAGGGCCGTCTCAAGGCCGCTGATCCCACCGTCGTATTCACACAAGG
AAGAGATCGACCGCCGCGTTCGGGGGTCCATGAGGATGGGACACAGCCTG
TACGGGCTCGATGAGGGCCGTCTCAAGGCCGCTGATCCCACCGTCGTATT
CACACAAGCTCTGTGCGACGTCTGCGCCCCATCGTTTCCGATGGTTCTCA
GCACCTGCGCTAGGGTTCTCGGCGATAACCCTAGGATCGTATCCATCGAA
CCGGGACTCTGTGCGACGTCTGCGCCCCATCGTTTCCGATGGTTCTCAGC
ACCTGCGCTAGGGTTCTCGGCGATAACCCTAGGATCGTATCCATCGAACC
GGGAAGCGTGGCGGAAGTCATCGACTCCGTTCGTCTGGTTGGCCGCGAGA
CCGGTTTCACGGAAGAGGGGATCGCCGAAGCCAGGCGTCTGGAGGCCGGC
TTCGACAAAATCAGATCGGTCGTCACTAAACTGGAAAGCACCCTTGCCAC
GGCGGCGCCGGCGCCGGCGGCCCTGGGGCCCCCCGGAGCGGCGGCCGGGG
TAGTGGGGGTATCTCCCGGCGGAGTTGGTTCAGTCCGCAAGAAACAGAAG
GTGGCGTTTTTGGAGTGGCTGGAGCCTCTCTTTAACGGAGGCCACTGGGT
GCCGGATCTCGTGCGGGCGGCCGGGGGCGAGTACACGATGGCAGAACCCG
AGCGTGGCGGAAGTCATCGACTCCGTTCGTCTGGTTGGCCGCGAGACCGG
TTTCACGGAAGAGGGGATCGCCGAAGCCAGGCGTCTGGAGGCCGGCTTCG
ACAAAATCAGATCGGTCGTCACTAAACTGGAAAGCACCCTTGCCACGGCG
GCGCCGGCGCCGGCGGCCCTGGGGCCCCCCGGAGCGGCGGCCGGGGTAGT
GGGGGTATCTCCCGGCGGAGTTGGTTCAGTCCGCAAGAAACAGAAGGTGG
CGTTTTTGGAGTGGCTGGAGCCTCTCTTTAACGGAGGCCACTGGGTGCCG
GATCTCGTGCGGGCGGCCGGGGGCGAGTACACGATGGCAGAACCCGGCAA
CAAGAGCATGGGCATGTCGGCGAAAGAGCTGACCGACTACGACGCCGACG
TCATCCTCGTCGCTCCCTGCGGCATGGACCGGAACCGAGCCAAGTCCGAC
GGGGAGCAGATGTGGCGCCACGACTGGTGGCGGGAGCTTAGAGCGGTCAA
GGATGGGAAGGCAACAAGAGCATGGGCATGTCGGCGAAAGAGCTGACCGA
CTACGACGCCGACGTCATCCTCGTCGCTCCCTGCGGCATGGACCGGAACC
GAGCCAAGTCCGACGGGGAGCAGATGTGGCGCCACGACTGGTGGCGGGAG
CTTAGAGCGGTCAAGGATGGGAAGGTGTACGCCTTGGACGGCAACGCCTA
CTACGCCAGACCGGGTCCCCGGCTACTGCAAGGTTGTGGTATCATCGCCA
GGCTGTTGCACGGGGATGCCGCGGGGGACGAGATTGGAGAGGACATTGCC
CCGCGCGACTCGTGGTTCATCATTACCGCCCCCCCTCCCACTCAGAAGAA
ACAGAAGGACGTGTGCCCCGAACGGGGCGCTGATGCTGACGCTGCTTCGG
GTACGGTGCCACTAGCCTCCGCGTAGGTGTACGCCTTGGACGGCAACGCC
TACTACGCCAGACCGGGTCCCCGGCTACTGCAAGGTTGTGGTATCATCGC
CAGGCTGTTGCACGGGGATGCCGCGGGGGACGAGATTGGAGAGGACATTG
CCCCGCGCGACTCGTGGTTCATCATTACCGCCCCCCCTCCCACTCAGAAG
AAACAGAAGGACGTGTGCCCCGAACGGGGCGCTGATGCTGACGCTGCTTC
GGGTACGGTGCCACTAGCCTCCGCGTAG
back to top