mRNA_E-siliculosus-1a_F_contig1479.2793.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1479.2793.1 vs. uniprot
Match: D8LBW8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBW8_ECTSI) HSP 1 Score: 876 bits (2264), Expect = 0.000e+0 Identity = 445/494 (90.08%), Postives = 458/494 (92.71%), Query Frame = 1
Query: 1 IVAGLLPRFLCGYLTPLS*AHPMFATRSTRLLRGLHACGVGRPLCSKASGVESQGPMSLLVFHRHGDRSPLRGHTPDEELALPTAAPAPXXGNTRGGSAVGTGDGGGSEKAARVAAPARSAEDFWRGQLVPAEVVRRLDELYPVKRSPGEAVPPDEARLLKQESAPFGCLTSLGLQQLRDRGEQFRQLYSCDDIDNEKLEVFSTNYRRTQLSAQGFLDGLLRAGGRGGVPVVVRPRADDFLNQWESRGHEMYERMMVVESEPEFRVTEETVGGPLKRRLHALDPALFPLPQGGRFRWMMAADYFMSARARGLRVAPELDALGTATIRHLVWRFSRFYGDEEMMRTMVGPLLAHIIECAAGSDNASPAIGSRNVPGTDASGGSLSRVVSSSCHDVTILALLHAMEADLLEDRDYWPPYGSTITFEVFSTRGGSGPGRGPRGGYGQDKGGGRDLVLKISVDGEPLRSRLFAGKGGDGVIHLSDFRTAVGSFLPTAV 1482
+VAGLLPRFLCG+LTPLS HPMFA +STRLLRGLHA GVGRPLCSKASG E+QG +SLLVFHRHGDRSPLRGHTPDEELALPTAA GNTRGGSAVGTGDGGGSEK RVAAP RSAE+FWRGQLVP EVVRRLDELYPVKRSPGEAVPPD+ ESAPFGCLTSLGLQQL+DRGEQFRQ YSCDDIDN KLEVFSTNYRRTQLSAQGFLDGLLRAGGRGGVPVVVRPRADDFLNQWESRGHEMYERMMVVESEP+FRVTEETVGGPLKRRLHALDPALFPLPQGGRFRWMMAADYFMSARARGLRVAPELDALGTATIRHLVWRFSRFYGD+EMMRTMVGPLLAHIIECAAGSD A PA GSRNVPG DASGGSLSRVVSSSCHDVTILALL+AMEADLLEDRDYWPPYGSTI FEV ST G SGPGRGPRGG G+DKGGG DLVLKISVDGEPLRSRLFAGKGGDG+I LSDF TAV SFLPTAV
Sbjct: 1 MVAGLLPRFLCGHLTPLSYVHPMFAPQSTRLLRGLHARGVGRPLCSKASGSETQGLLSLLVFHRHGDRSPLRGHTPDEELALPTAAAPAAPGNTRGGSAVGTGDGGGSEKPGRVAAPVRSAENFWRGQLVPPEVVRRLDELYPVKRSPGEAVPPDK------ESAPFGCLTSLGLQQLQDRGEQFRQRYSCDDIDNAKLEVFSTNYRRTQLSAQGFLDGLLRAGGRGGVPVVVRPRADDFLNQWESRGHEMYERMMVVESEPDFRVTEETVGGPLKRRLHALDPALFPLPQGGRFRWMMAADYFMSARARGLRVAPELDALGTATIRHLVWRFSRFYGDDEMMRTMVGPLLAHIIECAAGSDVAGPATGSRNVPGADASGGSLSRVVSSSCHDVTILALLYAMEADLLEDRDYWPPYGSTIAFEVSSTGGVSGPGRGPRGGRGEDKGGGGDLVLKISVDGEPLRSRLFAGKGGDGIIPLSDFHTAVRSFLPTAV 488
BLAST of mRNA_E-siliculosus-1a_F_contig1479.2793.1 vs. uniprot
Match: A0A6H5KWJ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWJ7_9PHAE) HSP 1 Score: 542 bits (1396), Expect = 7.300e-189 Identity = 270/297 (90.91%), Postives = 279/297 (93.94%), Query Frame = 1
Query: 592 KLEVFSTNYRRTQLSAQGFLDGLLRAGGRGGVPVVVRPRADDFLNQWESRGHEMYERMMVVESEPEFRVTEETVGGPLKRRLHALDPALFPLPQGGRFRWMMAADYFMSARARGLRVAPELDALGTATIRHLVWRFSRFYGDEEMMRTMVGPLLAHIIECAAGSDNASPAIGSRNVPGTDASGGSLSRVVSSSCHDVTILALLHAMEADLLEDRDYWPPYGSTITFEVFSTRGGSGPGRGPRGGYGQDKGGGRDLVLKISVDGEPLRSRLFAGKGGDGVIHLSDFRTAVGSFLPTAV 1482
+LEVFSTNYRRTQLSAQGFLDGLLRAGGRGGVPVVVRPRADDFLNQWESRGHEMYERMMVVESEP+FRVTEET+GGPLKR LHALDPALFPLPQGGRFRWMMAADYFMSARARGLRV PELD LGTATIRHLVWRFSRFYGD+EMMRTMVGPLLAHIIECAAGSD A P GSRNVPGTD GGSLSRVVSSSCHDVTILALL+AMEADLLEDRDYWPPYGSTI FEV ST GGSGPGR PRGG GQDKGGG LVLKISVDG+PLRSRLF+GKGGDG+I LSDFRTAVG+ LPTAV
Sbjct: 31 RLEVFSTNYRRTQLSAQGFLDGLLRAGGRGGVPVVVRPRADDFLNQWESRGHEMYERMMVVESEPDFRVTEETIGGPLKRSLHALDPALFPLPQGGRFRWMMAADYFMSARARGLRVTPELDVLGTATIRHLVWRFSRFYGDDEMMRTMVGPLLAHIIECAAGSDIAGPVTGSRNVPGTDGGGGSLSRVVSSSCHDVTILALLYAMEADLLEDRDYWPPYGSTIAFEVCSTGGGSGPGREPRGGRGQDKGGGGGLVLKISVDGDPLRSRLFSGKGGDGIIPLSDFRTAVGNLLPTAV 327
BLAST of mRNA_E-siliculosus-1a_F_contig1479.2793.1 vs. uniprot
Match: K3W775_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W775_GLOUD) HSP 1 Score: 128 bits (322), Expect = 6.820e-29 Identity = 107/373 (28.69%), Postives = 161/373 (43.16%), Query Frame = 1
Query: 175 LLVFHRHGDRSPLRGHTPDEELALPTAAPAPXXGNTRGGSAVGTGDGGGSEKAARVAAPARSAEDFWRGQLVPAEVVRRLDELYPVKRSPGEAVPPDEARLLKQESAPFGCLTSLGLQQLRDRGEQFR-----QLYSCDDIDNEKLEVFSTNYRRTQLSAQGFLDGLLRAGGRGGVPVVVRPRADDFLNQWESRGHEMYERMMVVESEPEFRVTEETVGGPLKRRLHALDPALFPLPQGGRFRWMMAADYFMSARARGLRVAPELDALGTATIRHLVWRFSRFYGDEEMMRTMVGPLLAHIIECAAGSDNASPAIGSRNVPGTDASGGSLSRVVSSSCHDVTILALLHAMEADLLEDRDYWPPYGSTITFEVF 1278
L V HRHGDR+PLR + LA E+ R A SA+D + + V A V + + G A P ++ PFG LT+ G++Q+ RG++ R + S D + + + +FS +Y RTQLS Q L GLL R V V P D +N + + E+ +E E E E P K L P Q F WM AADYF+ A G+ + P +A A++ HL +RF +FY +++ + G L+ H++ PA + ++V S HD++IL++LHA+ A L +D +WP Y S + E+
Sbjct: 12 LQVLHRHGDRTPLRNVFKGDPLAE-------------------------FEECKRWAPKLPSADDVAQLRSVAAVV-----DFAKAADASGSAKP--------YQTRPFGYLTTTGIEQMTARGDKVRSFCVDEALSMDSLTDRDVHIFSNSYTRTQLSVQALLRGLLHGKPRITPRVHVLPPDHDMINTY-AAFPEIATLKAALEHENEEFAFREHEMAPRKAELTRALPMFASGSQP--FTWMAAADYFVCRDAHGVSMIPGTEAHCDASVLHLSFRFHQFYSHPRVLQLVAGRLMQHVLLEIQKVTTNDPA---------------MKKLVIYSGHDISILSVLHAINATLADDDKWWPEYASAVALELL 328
BLAST of mRNA_E-siliculosus-1a_F_contig1479.2793.1 vs. uniprot
Match: A0A024FXP2_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FXP2_9STRA) HSP 1 Score: 124 bits (311), Expect = 2.250e-27 Identity = 107/383 (27.94%), Postives = 174/383 (45.43%), Query Frame = 1
Query: 175 LLVFHRHGDRSPL----RGHTPDEELALPTAAPAPXXGNTRGGSAVGTGDGGGSEKAARVAAPARSAEDFWRGQLVPAEVVRRLDELYPVKRSPGEAVPPDEARLLKQESAPFGCLTSLGLQQLRDRGEQFRQLYSCDDI--------DNEKLEVFSTNYRRTQLSAQGFLDGLLRAGGR-GGVPVVVRPRADDFLNQWE--SRGHEMYERMMVVESEPEFRVTEETVGGPLKRRLHALDPALFPLPQGGRFRWMMAADYFMSARARGLRVAPELDALGTATIRHLVWRFSRFYGDEEMMRTMVGPLLAHIIECAAGSDNASPAIGSRNVPGTDASGGSLSRVVSSSCHDVTILALLHAMEADLLEDRDYWPPYGSTITFEVF 1278
+ + HRHGDR+PL GH +E+ R A+ W +L V+ L Y + ++VP + S+ FG LTS+G++Q+ +RG Q RQ D+ D E + VF+ ++ RTQLS + L GLL A + + + + P DFLN++ S+ M RM +SE FR E P+K +L + P + +F WM+AADY+ + + ++ T+ HL +RF RFY D +++ + G ++ I + N S D+S +R+++ S HDVT+LA+LH + A ++ D+ +WP YG+ ITF++
Sbjct: 8 VQIVHRHGDRTPLWNVFAGHKMEEQ---------------------------------------REAKR-WLTKLPSDAVLSDLCGKYVLASQTPQSVPN------RLPSSEFGRLTSIGMEQMIERGVQLRQNLDPQDVEGTFFSQLDPENVMVFANSHERTQLSVKALLLGLLHAEKKLFPLQINLLPIDQDFLNRYSFYSQLVAMKARMETTDSELRFREAEMK---PIKEQLCGVLPIFSQMKH--KFVWMIAADYYTCRISHKMSRLSGIEDCHRETMEHLSFRFQRFYSDPKILYLVAGGIMEQIYAYVLQTINHS----------IDSS----ARLIAYSGHDVTLLAILHFLGAAMVGDKSWWPDYGTAITFQLL 325
BLAST of mRNA_E-siliculosus-1a_F_contig1479.2793.1 vs. uniprot
Match: H3GJ41_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GJ41_PHYRM) HSP 1 Score: 120 bits (300), Expect = 7.740e-26 Identity = 83/289 (28.72%), Postives = 134/289 (46.37%), Query Frame = 1
Query: 487 ESAPFGCLTSLGLQQLRDRGEQFRQLYS-----CDDIDNEKLEVFSTNYRRTQLSAQGFLDGLLRAGGRGGVPVVVRPRADDFLNQWESRGHEMYERMMVVESEPEFRVTEETVGGPLKRRLHALDPA----LFPLPQGGRFRWMMAADYFMSARARGLRVAPELDALGTATIRHLVWRFSRFYGDEEMMRTMVGPLLAHIIE-----------CAAGSDNASPAIGSRNVPGTDASGGSLSRVVSSSCHDVTILALLHAMEADLLEDRDYWPPYGSTITFEVFSTRGG 1293
+ PFG LT+ G++Q+ RG++ R+ D++ E++++FS Y RTQLSAQ LDGLLR + PV V P D +N + M + + + EF E + P+K+ L L PA L P F W+ ADY++ R + G AT RHL +RF +FY +++ + G L+ +++ C D + + ++V S HDV++LA+L M+A++ + D+WP Y S + E+ G
Sbjct: 70 QQRPFGYLTTRGIEQMTMRGDRLREFCKKEELRLDEVTPEQIQIFSNAYTRTQLSAQALLDGLLRDQPQLTPPVSVLPPEKDIINTYGVFPEIMEMKAAMEKDNAEFAAREHEMA-PVKQELMKLFPAFNSGLVP------FSWLTPADYYVCRRVHQAPYILGTEVHGEATERHLGFRFHQFYSHRTILKLVAGRLMHNMLREVIQTSVHGDACNTALDKVVDSFSDLQMQKVLWEHSESKKLVIYSGHDVSLLAVLRTMDAEITNNIDWWPEYSSALALELLEDENG 351
BLAST of mRNA_E-siliculosus-1a_F_contig1479.2793.1 vs. uniprot
Match: W7T876_9STRA (Histidine acid n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T876_9STRA) HSP 1 Score: 119 bits (299), Expect = 2.220e-25 Identity = 92/328 (28.05%), Postives = 149/328 (45.43%), Query Frame = 1
Query: 343 AAPARSAEDFWRGQLVPAEVVRRLDELYPVKRSPGEAVPPDEARLLKQESAPFGCLTSLGLQQLRDRGEQFRQLY--------------SCDDIDNEKLEVFSTNYRRTQLSAQGFLDGL--LRAGGRGGVPVVVRPRADDFLNQWESRGHEMYERMMVVESEPEFRVTEETVGGPLKRRLHALDPALFPLPQGGRFRWMMAADYFMSARARGLRVAPELDALGTATIRHLVWRFSRFYGDEEMMRTMVGPLLAHIIECAAGSDNASPAIGSRNVPGTDASGGSLSRVVSSSCHDVTILALLHAMEADLLEDRDYWPPYGSTITFEVF 1278
AA A+ + W +L E + L+ +P++ S +P D + PFGCLT GL+ +R+ G R L+ + ++ K++VFS+N+ RTQ SAQG L GL + G VPV VR D ++ ++++ + + + V + F +E + L + L P F+WM AAD+F + + L L T+ ++ WRF ++Y ++ ++ PLL ++ G +A D V S HDVT+LA LHA++ L+ D +WPP+ S I FEV
Sbjct: 68 AAVAQEEQKRWLRRLPNEEDMAFLNLHFPIQ-SAATRIPHDVI------TRPFGCLTGKGLESMRNLGRSIRNLHPELLGGGEIKKHSDTPKRSESVKIKVFSSNFSRTQQSAQGLLHGLGAQQVAHSGQVPVFVREENDCTIHMYDNKPAGIQDEVNKVLTSSSFLCRQEE-----QETLKSDLVKLIPKFTKENFKWMEAADFFW-CWPEDVDMPTRLQKLRRPTLEYVAWRFKQYYSHRPLLTLVIAPLLEEVLRTLHGMSHAHFERRESKERNLD--------VNVYSAHDVTLLAFLHALDWPLIHDLSWWPPFCSAIVFEVL 374
BLAST of mRNA_E-siliculosus-1a_F_contig1479.2793.1 vs. uniprot
Match: A0A5D6XLT6_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XLT6_9STRA) HSP 1 Score: 114 bits (285), Expect = 4.890e-24 Identity = 105/375 (28.00%), Postives = 159/375 (42.40%), Query Frame = 1
Query: 175 LLVFHRHGDRSPLRGHTPDEELALPTAAPAPXXGNTRGGSAVGTGDGGGSEKAARVAAPARSAEDFWRGQLVPAEVVRRLDELYPVKRSPGEAVPPDEARLLKQESAPFGCLTSLGLQQLRDRGEQFRQLYSCD-----DIDNEKLEVFSTNYRRTQLSAQGFLDGLLRAGGRGGVPVVVRPRADDFLNQWESRGHEMYERMMVVESEPEFRVTEETVGGPLKRRLHALDPALFPLPQGG--RFRWMMAADYFMSARARGLRVAPELDALGTATIRHLVWRFSRFYGDEEMMRTMVGPLLAHIIECAAGSDNASPAIGSRNVPGTDASGGSLSRVVSSSCHDVTILALLHAMEADLLEDRDYWPPYGSTITFEVF 1278
+ V HRHGDR+PLR R A + W L +E + +L + V + A P + R PFG LT G++Q+ RG + R L + +++ + V S Y RTQLSAQ L GLL R V V + D +N + S E+ +E+E E E P K+ L L PL G F WM ADYF+ A + + P +A G A HL +RF +FY + +++ +VG L+ +++ + + V D SG R+V S HD++IL++LHA++A +D+ +WP Y S + E+
Sbjct: 6 VQVVHRHGDRTPLRN-------------------------------------VFRGARGEEAEAQRWEPMLPLSEQLAQLRGAFRVATAQTPAQSPLQTR-------PFGFLTRRGIEQMHARGVKLRALGEREGLPFASLNDADVRVMSNAYMRTQLSAQALLHGLLGDELRLAPRVHVLAQERDMINTYASFP-EIATLKAALETESEELAFREHAMAPRKQEL----ARLLPLFAAGCEPFTWMTTADYFVCRTAHAVPLIPGTEAHGDAAQGHLSFRFHQFYSNPRILQLVVGRLIQNVL------------VEMQRVM-ADESG--QRRLVVYSGHDISILSVLHAVDAARADDQSWWPEYSSAVALELL 316
BLAST of mRNA_E-siliculosus-1a_F_contig1479.2793.1 vs. uniprot
Match: A0A662Y1U9_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y1U9_9STRA) HSP 1 Score: 110 bits (276), Expect = 5.500e-23 Identity = 90/315 (28.57%), Postives = 133/315 (42.22%), Query Frame = 1
Query: 370 FWRGQLVPAEVVRRLDELYPVKRSPGEAVPPDEARLLKQESAPFGCLTSLGLQQLRDRGEQFRQLYSCD-----DIDNEKLEVFSTNYRRTQLSAQGFLDGLLRAGGRGGVPVVVRPRADDFLNQWESRGHEMYERMMVVESEPEFRVTEETVGGPLKRRLHALDPALFPLPQGGR--FRWMMAADYFMSARARGLRVAPELDALGTATIRHLVWRFSRFYGDEEMMRTMVGPLLAHIIECAAGSDNASPAIGSRNVPGTDASGGSLSRVVSSSCHDVTILALLHAMEADLLEDRDYWPPYGSTITFEVFSTRGG 1293
W QL E + L E Y V G + PFG LT+ G++Q+ RG++ R+ + D+ ++++FS Y RTQLSAQ L GLLR + PV V P D +N + + M + + EF E + P K+ L L P+ G+ F WM A DYF+ RA + P + G AT RHL +RF + M L H ++V S HDV++LA+L A++A++ +D D+WP Y S + E+ G
Sbjct: 39 LWERQLPGPEQLAHLREKYSVHLGGGVQT--------SFQHRPFGYLTTTGIRQMTARGDRLREFCELEELPLADVAPSEVQIFSNTYTRTQLSAQALLSGLLRDQQQLKPPVSVFPPETDIINTYAAFPEIMDLKKELERDNAEFAAREHEMA-PCKQELMRL----LPVFDAGKVPFTWMAATDYFVCRRAHQVPYIPGTEVHGHATERHLGFRFHQ----------MQKALWDHRER---------------------------KKLVIYSGHDVSLLAVLRAIDAEIADDIDWWPEYSSALALELLEDESG 303
BLAST of mRNA_E-siliculosus-1a_F_contig1479.2793.1 vs. uniprot
Match: A0A8K1CD03_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CD03_PYTOL) HSP 1 Score: 108 bits (271), Expect = 3.700e-22 Identity = 79/279 (28.32%), Postives = 131/279 (46.95%), Query Frame = 1
Query: 487 ESAPFGCLTSLGLQQLRDRGEQF-----RQLYSCDDIDNEKLEVFSTNYRRTQLSAQGFLDGLLRAGGRGGVPVVVRPRADDFLNQWESRGHEMYERMMVVESEPEFRVTEETVGGPLKRRLHALDP----ALFPLPQGGRFRWMMAADYFMSARARGLRVAPELDALGTATIRHLVWRFSRFYGDEEMMRTMVGPLLAHII-ECAAGSDNASPAIGSRNVPGTDASGGSLSRVVSSSCHDVTILALLHAMEADLLEDRDYWPPYGSTITFEVFSTRGG 1293
++ PFGCLT G++Q+ RG ++ S + + ++V+ Y RTQ+S QG L GL + V +D ++ + + E+ E + ++ E + T E K L L P AL P F+WM DYF A L + P +AL T+RH+ +RF++FY + +VG LL +++ E AS A +++ S HDV+ILA+LHA++A+++ + +WP Y S ++ E+ G
Sbjct: 72 QTRPFGCLTQKGIEQMEARGSLLAAFCAQEGLSFSTMGLDDVKVYCNAYLRTQMSVQGLLTGLFADHAHLDPLIQVLAPHEDMIHTY-TVYPEIAELKVQMDRENDALKTREHEMAKQKAELMTLLPSYRVALDP------FQWMTCYDYFTCRAAHELPLIPGTEALEDDTLRHITFRFNQFYSHRRIRSLLVGMLLDNVLQEMTKAQQEASDA----------------KKLIVYSGHDVSILAILHAIDAEIVHNEKWWPGYSSAVSLELLEDEAG 327
BLAST of mRNA_E-siliculosus-1a_F_contig1479.2793.1 vs. uniprot
Match: F0W342_9STRA (Uncharacterized protein AlNc14C12G1420 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W342_9STRA) HSP 1 Score: 108 bits (270), Expect = 6.020e-22 Identity = 78/278 (28.06%), Postives = 136/278 (48.92%), Query Frame = 1
Query: 499 FGCLTSLGLQQLRDRGEQFRQLYSCDDIDN--------EKLEVFSTNYRRTQLSAQGFLDGLLRAGGR-GGVPVVVRPRADDFLNQWESRGHEMYERMMVVESEPEFRVTEETVGGPLKRRLHALDPALFPLPQGGRFRWMMAADYFMSARARGLRVAPELDALGTATIRHLVWRFSRFYGDEEMMRTMVGPLL----AHIIECAAGSDNASPAIGSRNVPGTDASGGSLSRVVSSSCHDVTILALLHAMEADLLEDRDYWPPYGSTITFEVFSTRGG 1293
FG LTS+G+QQL DRG Q R D D E + +++ ++ RTQLSA+ L GLL + + + + P DFLN++ + + + +++ + R E + ++ +L +F + +F WM+AADY + L + ++ + TI HL +RF RFY D ++ + G ++ HI++ SD G + +V+ S HDVT+LA+L+ + A ++ ++ +WP YG+ I F+V + G
Sbjct: 74 FGRLTSIGMQQLMDRGAQLRHSLFQHDADGTFFSQLEPENVLIYANSHERTQLSAKALLLGLLHVEKKLFPLHINLLPSEQDFLNRYAVHSELVEMKAAMEKTDLKLRTREAEMQCVREKLCDSLP--IFSHKKH-KFVWMIAADYCTCRISHELPLISGIEDIHRETIEHLSFRFQRFYSDPAILYLVAGGIMERIHTHILQAVNRSD------------------GLNAHLVAFSGHDVTLLAILNFLGASVVREKSWWPEYGTAIAFQVVESEDG 330 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1479.2793.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1479.2793.1 >prot_E-siliculosus-1a_F_contig1479.2793.1 ID=prot_E-siliculosus-1a_F_contig1479.2793.1|Name=mRNA_E-siliculosus-1a_F_contig1479.2793.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=473bp MFATRSTRLLRGLHACGVGRPLCSKASGVESQGPMSLLVFHRHGDRSPLRback to top mRNA from alignment at E-siliculosus-1a_F_contig1479:9694..14762+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1479.2793.1 ID=mRNA_E-siliculosus-1a_F_contig1479.2793.1|Name=mRNA_E-siliculosus-1a_F_contig1479.2793.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=5069bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1479:9694..14762+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1479:9694..14762+ >mRNA_E-siliculosus-1a_F_contig1479.2793.1 ID=mRNA_E-siliculosus-1a_F_contig1479.2793.1|Name=mRNA_E-siliculosus-1a_F_contig1479.2793.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2838bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1479:9694..14762+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |