mRNA_E-siliculosus-1a_F_contig14773.2787.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig14773.2787.1 vs. uniprot
Match: A0A0X3YCF2_9GAMM (HTH araC/xylS-type domain-containing protein n=5 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A0X3YCF2_9GAMM) HSP 1 Score: 646 bits (1667), Expect = 8.160e-232 Identity = 325/347 (93.66%), Postives = 333/347 (95.97%), Query Frame = 1
Query: 1 DSAPGSAAWQGTDTTLQRALKLIDAGALQQQNQTQLAERLGISERYLRKMFQQQLGLAPKQYAITQQVLFAKKLLHETALPISAIAYQAGFNSVRRFNDAFKQQLQLIPGAIRRGHDSADPELIRLELSYRPPLAWHTMLQFWQARTLDGIDWVDQQSYGRTFSYQQSAGWFEVKPKADSSLQLSLHWPAKQGLFSLVQQLRRLLDLDANMLQIEHQLQQHALFSNGMISGLRIPGLWCSWEAGVRAILGQQVSVAGARTQLNRLVQALAEPVAGDKKLFPTPQAVAQSNLEMIKVPQARRDTLKALAHFVMATPDASPQQWLSIKGIGPWTVNYACLRGLSASDIW 1041
DSAPGSAAWQGTDTTLQRAL LIDAG LQQQNQTQLAERLGIS+RYLRKMFQQQLGLAPKQYAITQQVLFAKKLLHETALPISAIAYQAGFNSVRRFNDAFKQQLQL PGAIRR HD+ +P++IRLELSYRPPLAWHTMLQFWQARTLDGIDWV+QQSYGRTFSYQQS GWFEV PK DSSLQLSLHW KQGLF LVQQLRRLLDLDANMLQIE QLQQHALFSNG+ISGLRIPGLWCSWEAGVRAILGQQVSVAGARTQLNRLVQALAE V GDKKLFPTPQAVAQS+LEMIKVPQARRDTLKALAHFVMATPDASPQQWLSIKGIGPWTVNYACLRGLSASDIW
Sbjct: 70 DSAPGSAAWQGTDTTLQRALTLIDAGGLQQQNQTQLAERLGISQRYLRKMFQQQLGLAPKQYAITQQVLFAKKLLHETALPISAIAYQAGFNSVRRFNDAFKQQLQLSPGAIRRRHDNTEPDVIRLELSYRPPLAWHTMLQFWQARTLDGIDWVNQQSYGRTFSYQQSVGWFEVTPKTDSSLQLSLHWAGKQGLFGLVQQLRRLLDLDANMLQIEQQLQQHALFSNGIISGLRIPGLWCSWEAGVRAILGQQVSVAGARTQLNRLVQALAESVNGDKKLFPTPQAVAQSSLEMIKVPQARRDTLKALAHFVMATPDASPQQWLSIKGIGPWTVNYACLRGLSASDIW 416
BLAST of mRNA_E-siliculosus-1a_F_contig14773.2787.1 vs. uniprot
Match: A0A7Y5EMR6_9GAMM (DNA-3-methyladenine glycosylase 2 family protein n=1 Tax=Rheinheimera lutimaris TaxID=2740584 RepID=A0A7Y5EMR6_9GAMM) HSP 1 Score: 524 bits (1349), Expect = 1.810e-183 Identity = 266/347 (76.66%), Postives = 295/347 (85.01%), Query Frame = 1
Query: 1 DSAPGSAAWQGTDTTLQRALKLIDAGALQQQNQTQLAERLGISERYLRKMFQQQLGLAPKQYAITQQVLFAKKLLHETALPISAIAYQAGFNSVRRFNDAFKQQLQLIPGAIRRGHDSADPELIRLELSYRPPLAWHTMLQFWQARTLDGIDWVDQQSYGRTFSYQQSAGWFEVKPKADSSLQLSLHWPAKQGLFSLVQQLRRLLDLDANMLQIEHQLQQHALFSNGMISGLRIPGLWCSWEAGVRAILGQQVSVAGARTQLNRLVQALAEPVAGDKKLFPTPQAVAQSNLEMIKVPQARRDTLKALAHFVMATPDASPQQWLSIKGIGPWTVNYACLRGLSASDIW 1041
DSAPGSAAWQG+ TTLQRAL+LID G LQQ +Q LAERLGISERYLRK+FQQQLGLAPKQYA+TQQVLFAKKLLHETALP+S+IA+QAGFNSVRRFNDAFKQQLQL P AIRR ++A + + LELSYRPPLAW MLQFWQARTLDGIDW Q YGRTF+Y+ GWF+V P +SL+L LHW KQGLF+LVQ +RRLLDLDANML IE QL LF+ G+ISGLRIPGLW SWEAGVRA+LGQQV+VAGARTQLNRLVQAL EP+ DKKLFPTPQAV S+L MIKVP ARRDTLKALA FV+A P A PQQWL++KGIGPWTVNYA LRG+S SDIW
Sbjct: 70 DSAPGSAAWQGSQTTLQRALRLIDEGGLQQHSQAALAERLGISERYLRKLFQQQLGLAPKQYALTQQVLFAKKLLHETALPVSSIAFQAGFNSVRRFNDAFKQQLQLNPTAIRRRSNTA-VDALELELSYRPPLAWQKMLQFWQARTLDGIDWTGPQHYGRTFNYRGQPGWFDVAPLTKTSLKLRLHWQGKQGLFNLVQHIRRLLDLDANMLLIEQQLAASPLFAGGIISGLRIPGLWDSWEAGVRAVLGQQVNVAGARTQLNRLVQALGEPLDADKKLFPTPQAVLDSDLLMIKVPNARRDTLKALAQFVIAQPQAEPQQWLALKGIGPWTVNYAKLRGMSDSDIW 415
BLAST of mRNA_E-siliculosus-1a_F_contig14773.2787.1 vs. uniprot
Match: UPI0019D4F6DA (helix-turn-helix domain-containing protein n=1 Tax=Rheinheimera pleomorphica TaxID=2703963 RepID=UPI0019D4F6DA) HSP 1 Score: 521 bits (1343), Expect = 1.530e-182 Identity = 266/348 (76.44%), Postives = 297/348 (85.34%), Query Frame = 1
Query: 1 DSAPGSAAWQGTDTTLQRALKLIDAGALQQQNQTQLAERLGISERYLRKMFQQQLGLAPKQYAITQQVLFAKKLLHETALPISAIAYQAGFNSVRRFNDAFKQQLQLIPGAIRRGHDSA-DPELIRLELSYRPPLAWHTMLQFWQARTLDGIDWVDQQSYGRTFSYQQSAGWFEVKPKADSSLQLSLHWPAKQGLFSLVQQLRRLLDLDANMLQIEHQLQQHALFSNGMISGLRIPGLWCSWEAGVRAILGQQVSVAGARTQLNRLVQALAEPVAGDKKLFPTPQAVAQSNLEMIKVPQARRDTLKALAHFVMATPDASPQQWLSIKGIGPWTVNYACLRGLSASDIW 1041
DSAPGSAAWQGTDTTLQRAL+LID G LQQQ+Q LAERLGISERYLRK+FQQQLG+APKQYA+ QQVLFAKKLLHETALP+S++A+QAGFNSVRRFNDAFKQQL L P IRR H A DP ++L LSYRPPLAW ML FWQ RTLDGIDWV Q YGRTFS+ Q AGWFEV P ++L L LHWP KQGLF+L++QLRRLLDLDANMLQIE QL LF+ +ISGLRIPG+W SWEAGVRAILGQQVSVAGARTQLNRLVQAL EP+ DK+LFPTPQA+ ++L+MIKVPQARRDTLKALA V++ PDA+P+ WLSIKGIGPWTV+YA LRGLS SDIW
Sbjct: 71 DSAPGSAAWQGTDTTLQRALRLIDEGGLQQQSQQLLAERLGISERYLRKLFQQQLGMAPKQYALMQQVLFAKKLLHETALPVSSVAFQAGFNSVRRFNDAFKQQLNLSPLQIRRQHHCAGDP--LQLSLSYRPPLAWPQMLAFWQQRTLDGIDWVTDQRYGRTFSFMQQAGWFEVAPGTANNLTLQLHWPGKQGLFTLLRQLRRLLDLDANMLQIEQQLCSQPLFNGSIISGLRIPGVWNSWEAGVRAILGQQVSVAGARTQLNRLVQALGEPLYHDKRLFPTPQALLNNDLQMIKVPQARRDTLKALAQAVISQPDAAPEHWLSIKGIGPWTVSYARLRGLSDSDIW 416
BLAST of mRNA_E-siliculosus-1a_F_contig14773.2787.1 vs. uniprot
Match: UPI00196A14AF (helix-turn-helix domain-containing protein n=1 Tax=Rheinheimera baltica TaxID=67576 RepID=UPI00196A14AF) HSP 1 Score: 518 bits (1333), Expect = 4.900e-181 Identity = 256/347 (73.78%), Postives = 297/347 (85.59%), Query Frame = 1
Query: 1 DSAPGSAAWQGTDTTLQRALKLIDAGALQQQNQTQLAERLGISERYLRKMFQQQLGLAPKQYAITQQVLFAKKLLHETALPISAIAYQAGFNSVRRFNDAFKQQLQLIPGAIRRGHDSADPELIRLELSYRPPLAWHTMLQFWQARTLDGIDWVDQQSYGRTFSYQQSAGWFEVKPKADSSLQLSLHWPAKQGLFSLVQQLRRLLDLDANMLQIEHQLQQHALFSNGMISGLRIPGLWCSWEAGVRAILGQQVSVAGARTQLNRLVQALAEPVAGDKKLFPTPQAVAQSNLEMIKVPQARRDTLKALAHFVMATPDASPQQWLSIKGIGPWTVNYACLRGLSASDIW 1041
DSAPGSAAWQGT+TTLQRAL+LID G LQQQNQ++LA RLGISERYLRK+FQQQLGL+PKQYA+ QQVLFAKKLLHET +PIS+IA+QAGFNSVRRFNDAFKQQL+L P IRR + + P ++L LSYRPPLAW ML FW+ RTLDGID V+ Q YGRTF++ Q GWFE+ P +SL+L +HW KQGLF L+ Q+RRLLDLDANMLQIE QL +H LFSNG+I GLRIPG+W SWEAGVRA+LGQQVSVAGARTQLNRL+QAL +P D++LFPTPQ+V QS+L+MIKVPQARR+TL+ALA FVM PDA+P+QWL IKGIGPWTV+YA LRGLS SDIW
Sbjct: 70 DSAPGSAAWQGTNTTLQRALRLIDDGCLQQQNQSELASRLGISERYLRKLFQQQLGLSPKQYALAQQVLFAKKLLHETVMPISSIAFQAGFNSVRRFNDAFKQQLKLSPLTIRRANKTT-PNTLQLSLSYRPPLAWQQMLDFWRDRTLDGIDSVNGQCYGRTFTFLQQPGWFEISPGQHNSLRLEVHWNGKQGLFKLINQIRRLLDLDANMLQIEQQLSRHTLFSNGIIPGLRIPGVWDSWEAGVRAVLGQQVSVAGARTQLNRLIQALGQPQPADRRLFPTPQSVVQSDLQMIKVPQARRETLRALAQFVMENPDAAPEQWLPIKGIGPWTVSYARLRGLSDSDIW 415
BLAST of mRNA_E-siliculosus-1a_F_contig14773.2787.1 vs. uniprot
Match: A0A0M2V694_9GAMM (HTH araC/xylS-type domain-containing protein n=2 Tax=Arsukibacterium ikkense TaxID=336831 RepID=A0A0M2V694_9GAMM) HSP 1 Score: 499 bits (1286), Expect = 9.590e-174 Identity = 255/347 (73.49%), Postives = 282/347 (81.27%), Query Frame = 1
Query: 1 DSAPGSAAWQGTDTTLQRALKLIDAGALQQQNQTQLAERLGISERYLRKMFQQQLGLAPKQYAITQQVLFAKKLLHETALPISAIAYQAGFNSVRRFNDAFKQQLQLIPGAIRRGHDSADPELIRLELSYRPPLAWHTMLQFWQARTLDGIDWVDQQSYGRTFSYQQSAGWFEVKPKADSSLQLSLHWPAKQGLFSLVQQLRRLLDLDANMLQIEHQLQQHALFSNGMISGLRIPGLWCSWEAGVRAILGQQVSVAGARTQLNRLVQALAEPVAGDKKLFPTPQAVAQSNLEMIKVPQARRDTLKALAHFVMATPDASPQQWLSIKGIGPWTVNYACLRGLSASDIW 1041
DSAPGSAAW GT TTL RAL+LI G LQQQNQ QLAERLGIS+RYLRK+F+QQLGL P QYA+ QVLFAKKLLHET L I++IAYQAGFNSVRRFNDAF +QLQL P AIRR + I LELSYRPPLAW+ ML FWQARTLDGIDWV Q YGRTF Y + GWFEV PK SSL L+LHWP +QGL LVQ LRRLLDLDANMLQIE QL +H LFS ++SGLRIPGLW SWEAGVRAILGQQVSVAGAR+QLNRLVQAL V DK+LFPTPQAV S+L+MIKVP RR TL+ LA ++A PDA+P+QWL+IKGIGPWTVNYA +RGL SDIW
Sbjct: 78 DSAPGSAAWHGTHTTLYRALRLIAEGGLQQQNQQQLAERLGISDRYLRKLFRQQLGLTPTQYALHSQVLFAKKLLHETQLSITSIAYQAGFNSVRRFNDAFGKQLQLSPSAIRRQRQPVNGNGIELELSYRPPLAWNEMLSFWQARTLDGIDWVADQRYGRTFDYLEQPGWFEVCPKTSSSLTLTLHWPGQQGLAGLVQHLRRLLDLDANMLQIEQQLSRHPLFSRALLSGLRIPGLWNSWEAGVRAILGQQVSVAGARSQLNRLVQALGALVGTDKRLFPTPQAVLASDLQMIKVPALRRQTLQHLATLLLAEPDATPEQWLNIKGIGPWTVNYAQMRGLGHSDIW 424
BLAST of mRNA_E-siliculosus-1a_F_contig14773.2787.1 vs. uniprot
Match: UPI001C311D20 (helix-turn-helix domain-containing protein n=1 Tax=Rheinheimera sp. SM2107 TaxID=2848612 RepID=UPI001C311D20) HSP 1 Score: 498 bits (1283), Expect = 2.080e-173 Identity = 248/347 (71.47%), Postives = 285/347 (82.13%), Query Frame = 1
Query: 1 DSAPGSAAWQGTDTTLQRALKLIDAGALQQQNQTQLAERLGISERYLRKMFQQQLGLAPKQYAITQQVLFAKKLLHETALPISAIAYQAGFNSVRRFNDAFKQQLQLIPGAIRRGHDSADPELIRLELSYRPPLAWHTMLQFWQARTLDGIDWVDQQSYGRTFSYQQSAGWFEVKPKADSSLQLSLHWPAKQGLFSLVQQLRRLLDLDANMLQIEHQLQQHALFSNGMISGLRIPGLWCSWEAGVRAILGQQVSVAGARTQLNRLVQALAEPVAGDKKLFPTPQAVAQSNLEMIKVPQARRDTLKALAHFVMATPDASPQQWLSIKGIGPWTVNYACLRGLSASDIW 1041
DSAPGSAAWQGT TTL RA++LID GALQQQ+Q +LA RLGIS+RYLRK+FQQQ+GL P QYA++QQVLFAKKLLHET L I+ IAYQAGF SVRRFNDAF +QL+L P AIRR + ++LELSYRPPLAW ML FWQARTL GIDWV+ YGRTFSY Q GWFEV P+ D+SL L LHWP GL +LVQQLRRLLDLDAN+LQIE QL H+ FS G+I+GLRIPGLW +WEAGVRA+LGQQVSVAGARTQLNRLVQAL P+ +K+LFP+PQAV S+L+MIKVP RR TL+ LA FV+A PDA+P+ WLSIKGIGPWTVNYA +RGL S+IW
Sbjct: 70 DSAPGSAAWQGTHTTLHRAMRLIDEGALQQQSQAELAARLGISDRYLRKLFQQQMGLTPTQYALSQQVLFAKKLLHETQLAITNIAYQAGFQSVRRFNDAFVKQLRLNPSAIRRQREHVAGNSLQLELSYRPPLAWQQMLAFWQARTLTGIDWVEGNCYGRTFSYLQQPGWFEVSPQTDNSLGLKLHWPGSTGLGALVQQLRRLLDLDANLLQIEQQLANHSFFSRGLINGLRIPGLWSTWEAGVRAVLGQQVSVAGARTQLNRLVQALGAPINAEKRLFPSPQAVLDSDLQMIKVPALRRQTLRDLAAFVLAEPDAAPESWLSIKGIGPWTVNYARMRGLGDSNIW 416
BLAST of mRNA_E-siliculosus-1a_F_contig14773.2787.1 vs. uniprot
Match: UPI0019650994 (helix-turn-helix domain-containing protein n=1 Tax=unclassified Rheinheimera TaxID=115860 RepID=UPI0019650994) HSP 1 Score: 498 bits (1283), Expect = 2.150e-173 Identity = 249/350 (71.14%), Postives = 294/350 (84.00%), Query Frame = 1
Query: 1 DSAPGSAAWQGTDTTLQRALKLIDAGALQQQNQTQLAERLGISERYLRKMFQQQLGLAPKQYAITQQVLFAKKLLHETALPISAIAYQAGFNSVRRFNDAFKQQLQLIPGAIRRGHDSADPELIRLELSYRPPLAWHTMLQFWQARTLDGIDWVDQQSYGRTFSYQQSAGWFEVKPKADSSLQLSLHWPAKQGLFSLVQQLRRLLDLDANMLQIEHQLQQHALFSNGMISGLRIPGLWCSWEAGVRAILGQQVSVAGARTQLNRLVQALAEPVAGDK---KLFPTPQAVAQSNLEMIKVPQARRDTLKALAHFVMATPDASPQQWLSIKGIGPWTVNYACLRGLSASDIW 1041
DSAPGSAAWQG++TTLQRA++LID G LQQQ Q LA RLGI+ERYLRK+FQQ LG+ PKQYA+ QQVLFAKKLLHET +P++ IA+ AGFNSVRRFNDAFKQQL+L P IRR + A ++++L LSYRPPLAW ML FW+ARTL+GIDWVD Q YGRTFS+ Q GWF V+P A+++L+L LHWP +QGLFSLVQ LRRLLDLDAN+L IE QL H LFS G+ISGLRIPG+W SWEAGVRA+LGQQVSVAGARTQLNRLVQAL +P+ D +LFP+PQA+A S+L+MIKVPQARRDTLKALA FV+ DA+P+ WL+IKGIGPWTV+YA LRGLS +D+W
Sbjct: 70 DSAPGSAAWQGSNTTLQRAIRLIDDGGLQQQTQHDLACRLGITERYLRKLFQQHLGMPPKQYALAQQVLFAKKLLHETTMPVNHIAFHAGFNSVRRFNDAFKQQLKLSPLNIRR-QNKASGDMLQLTLSYRPPLAWQQMLDFWRARTLEGIDWVDAQRYGRTFSFMQQPGWFVVEPAANNNLKLQLHWPGEQGLFSLVQHLRRLLDLDANLLHIEQQLTSHPLFSQGIISGLRIPGVWSSWEAGVRAVLGQQVSVAGARTQLNRLVQALGKPLETDGMSIRLFPSPQALASSDLQMIKVPQARRDTLKALAQFVLQQSDAAPEHWLAIKGIGPWTVSYARLRGLSDTDVW 418
BLAST of mRNA_E-siliculosus-1a_F_contig14773.2787.1 vs. uniprot
Match: A0A486XSI1_9GAMM (ADA regulatory protein n=1 Tax=Rheinheimera sp. BAL341 TaxID=1708203 RepID=A0A486XSI1_9GAMM) HSP 1 Score: 498 bits (1282), Expect = 2.750e-173 Identity = 249/347 (71.76%), Postives = 289/347 (83.29%), Query Frame = 1
Query: 1 DSAPGSAAWQGTDTTLQRALKLIDAGALQQQNQTQLAERLGISERYLRKMFQQQLGLAPKQYAITQQVLFAKKLLHETALPISAIAYQAGFNSVRRFNDAFKQQLQLIPGAIRRGHDSADPELIRLELSYRPPLAWHTMLQFWQARTLDGIDWVDQQSYGRTFSYQQSAGWFEVKPKADSSLQLSLHWPAKQGLFSLVQQLRRLLDLDANMLQIEHQLQQHALFSNGMISGLRIPGLWCSWEAGVRAILGQQVSVAGARTQLNRLVQALAEPVAGDKKLFPTPQAVAQSNLEMIKVPQARRDTLKALAHFVMATPDASPQQWLSIKGIGPWTVNYACLRGLSASDIW 1041
DSAPGSAAWQGT+T LQRA++LIDAG LQQQ+Q +LA RLGISERYLRK+F +QLG+ PKQYAITQQVLFAKKLLHET++P+S IA+QAGFNSVRRFNDAFK+QLQL P IRRG S + L L LSYRPPLAW ML FW+ARTLDG+DWV Q YGR+FS+ Q AGWFEV P D++L L L+WP + GLFSLV+Q+RRLLDLDANMLQIE L H LF G+++GLRIPG+W SWEAGVRAILGQQVSVA ARTQLNRLVQAL EP+ D++LFPTP AV S+L+MIK+P ARR+TLKALA ++ PDA+ QWL+IKGIGPWTVNYA LRG S +DIW
Sbjct: 70 DSAPGSAAWQGTNTALQRAIRLIDAGDLQQQSQAELANRLGISERYLRKLFTEQLGMPPKQYAITQQVLFAKKLLHETSMPVSHIAFQAGFNSVRRFNDAFKRQLQLSPLQIRRGKVSRNKGL-ELTLSYRPPLAWQQMLGFWRARTLDGVDWVAGQQYGRSFSFMQQAGWFEVAPARDNNLLLQLYWPGQHGLFSLVRQIRRLLDLDANMLQIEQHLSCHPLFQRGIVNGLRIPGVWDSWEAGVRAILGQQVSVAAARTQLNRLVQALGEPITADRRLFPTPTAVLNSDLQMIKLPDARRNTLKALAQAILQQPDAAADQWLTIKGIGPWTVNYAKLRGQSDTDIW 415
BLAST of mRNA_E-siliculosus-1a_F_contig14773.2787.1 vs. uniprot
Match: A0A285J284_9GAMM (DNA-3-methyladenine glycosylase II n=1 Tax=Rheinheimera tuosuensis TaxID=1323745 RepID=A0A285J284_9GAMM) HSP 1 Score: 493 bits (1268), Expect = 3.940e-171 Identity = 252/347 (72.62%), Postives = 281/347 (80.98%), Query Frame = 1
Query: 1 DSAPGSAAWQGTDTTLQRALKLIDAGALQQQNQTQLAERLGISERYLRKMFQQQLGLAPKQYAITQQVLFAKKLLHETALPISAIAYQAGFNSVRRFNDAFKQQLQLIPGAIRRGHDSADPELIRLELSYRPPLAWHTMLQFWQARTLDGIDWVDQQSYGRTFSYQQSAGWFEVKPKADSSLQLSLHWPAKQGLFSLVQQLRRLLDLDANMLQIEHQLQQHALFSNGMISGLRIPGLWCSWEAGVRAILGQQVSVAGARTQLNRLVQALAEPVAGDKKLFPTPQAVAQSNLEMIKVPQARRDTLKALAHFVMATPDASPQQWLSIKGIGPWTVNYACLRGLSASDIW 1041
DSAPGSAAWQGT TTLQRAL+LID GALQQ Q LA RLGI++RYLRK+FQQQLGL P QYA++Q+VLFAKKLLHET L I+ IAYQAGFNSVRRFNDAF +QL+L P AIRR ++L+LSYRPP+AW ML FWQARTL GIDWV+ Q YGRTF+Y Q GWFEV+PK SL L+LHWP + GL LVQ LRR+LDLDANMLQIE QL H LFS+G+I GLRIPGLW SWEAGVRAILGQQVSVAGARTQLNRLVQAL VA K+LFPTPQAV S+L MIKVP RR TL LA FV+A PDA+P++WLSIKGIGPWTVNYA +RGL SDIW
Sbjct: 70 DSAPGSAAWQGTQTTLQRALRLIDEGALQQHTQAALATRLGITDRYLRKLFQQQLGLTPTQYALSQKVLFAKKLLHETDLAITDIAYQAGFNSVRRFNDAFVRQLRLNPSAIRRHRPKTAGNGLQLDLSYRPPMAWDDMLAFWQARTLTGIDWVEGQRYGRTFNYLQHTGWFEVQPKTACSLLLTLHWPGRHGLSGLVQHLRRVLDLDANMLQIEQQLASHPLFSSGLIHGLRIPGLWNSWEAGVRAILGQQVSVAGARTQLNRLVQALGVTVAEQKRLFPTPQAVLASDLAMIKVPALRRQTLHDLAAFVLAEPDAAPERWLSIKGIGPWTVNYARMRGLGDSDIW 416
BLAST of mRNA_E-siliculosus-1a_F_contig14773.2787.1 vs. uniprot
Match: A0A2E6Z983_9GAMM (HTH araC/xylS-type domain-containing protein n=2 Tax=Bacteria TaxID=2 RepID=A0A2E6Z983_9GAMM) HSP 1 Score: 490 bits (1261), Expect = 4.560e-170 Identity = 248/347 (71.47%), Postives = 280/347 (80.69%), Query Frame = 1
Query: 1 DSAPGSAAWQGTDTTLQRALKLIDAGALQQQNQTQLAERLGISERYLRKMFQQQLGLAPKQYAITQQVLFAKKLLHETALPISAIAYQAGFNSVRRFNDAFKQQLQLIPGAIRRGHDSADPELIRLELSYRPPLAWHTMLQFWQARTLDGIDWVDQQSYGRTFSYQQSAGWFEVKPKADSSLQLSLHWPAKQGLFSLVQQLRRLLDLDANMLQIEHQLQQHALFSNGMISGLRIPGLWCSWEAGVRAILGQQVSVAGARTQLNRLVQALAEPVAGDKKLFPTPQAVAQSNLEMIKVPQARRDTLKALAHFVMATPDASPQQWLSIKGIGPWTVNYACLRGLSASDIW 1041
DSAPGS AWQGT TTLQRAL+LID G+LQQ Q LA RLGI++RYLRK+FQQQLG+ P QYA+ QQVLFAKKLLHET LP+S IAYQAGFNSVRRFNDAF +QL+L P AIRR H ++LELSYRPPLAW +ML FWQARTL G++WV+ YGRTFSY Q AGWFEV PK SSL L+LHW ++GL SLVQ+LRRLLDLD NMLQIE QL H LF+ ++SGLRIPGLW +WEAGVRAILGQQVSVAGARTQLNRLVQ L V DK+LFPTP+AV S L MIKVP RR TL+ LA FV+A P+ASP+QWL IKGIGPWTV+YA +RG S SDIW
Sbjct: 70 DSAPGSPAWQGTQTTLQRALRLIDEGSLQQHTQADLALRLGITDRYLRKLFQQQLGVTPTQYALNQQVLFAKKLLHETHLPVSCIAYQAGFNSVRRFNDAFVKQLRLNPSAIRRHHPEHANNGLKLELSYRPPLAWDSMLTFWQARTLTGVEWVEADRYGRTFSYLQHAGWFEVAPKTASSLTLTLHWSGRRGLSSLVQKLRRLLDLDTNMLQIEQQLASHPLFTEQLLSGLRIPGLWNTWEAGVRAILGQQVSVAGARTQLNRLVQELGTAVTDDKRLFPTPEAVFASQLAMIKVPALRRQTLRDLAAFVLAQPEASPEQWLDIKGIGPWTVSYAKMRGQSDSDIW 416 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig14773.2787.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig14773.2787.1 >prot_E-siliculosus-1a_F_contig14773.2787.1 ID=prot_E-siliculosus-1a_F_contig14773.2787.1|Name=mRNA_E-siliculosus-1a_F_contig14773.2787.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=347bp DSAPGSAAWQGTDTTLQRALKLIDAGALQQQNQTQLAERLGISERYLRKMback to top mRNA from alignment at E-siliculosus-1a_F_contig14773:2..1042- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig14773.2787.1 ID=mRNA_E-siliculosus-1a_F_contig14773.2787.1|Name=mRNA_E-siliculosus-1a_F_contig14773.2787.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1041bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig14773:2..1042- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig14773:2..1042- >mRNA_E-siliculosus-1a_F_contig14773.2787.1 ID=mRNA_E-siliculosus-1a_F_contig14773.2787.1|Name=mRNA_E-siliculosus-1a_F_contig14773.2787.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2082bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig14773:2..1042- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |