mRNA_E-siliculosus-1a_F_contig14751.2773.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig14751.2773.1
Unique NamemRNA_E-siliculosus-1a_F_contig14751.2773.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig14751.2773.1 vs. uniprot
Match: A0A1U9R9A9_9GAMM (Phosphodiesterase n=2 Tax=root TaxID=1 RepID=A0A1U9R9A9_9GAMM)

HSP 1 Score: 447 bits (1149), Expect = 1.280e-157
Identity = 209/230 (90.87%), Postives = 221/230 (96.09%), Query Frame = 1
Query:    1 DLVLISGDLVDFGLPEEYATFKQLLAELTLPVYLIPGNHDDRQHLRKAFPDHRYLFQYQDYLQWVVDDYPVRIVGLDSSVPGKPHGELSEASLQWLDATLAEQPTKPTLVMVHHHPFVSGIDHMDRQPLRHASALAAVIGKHTHVERVLCGHLHRSIQARFANTLAVSCPGVSHQVSLDLNPDGPSSFQLEPPGYLLHQWSTANGMVTHQGFIEHYPGPFPFYDANGLID 690
            DLVLISGDLVDFG P+EYATFKQ+LAELTLPVYLIPGNHDDRQ+LR AFP+HRYLFQ+ DYLQWVVDDYPV IVGLDSSVPGKPHGELSEASLQWLDATLAEQP KPTLVMVHHHPFVSGIDHMDRQPL+HA+ALA VIGK+  VERVLCGHLHRSIQARFANT+A+SCPGVSHQVSLDL PDGP+SFQLEPPGYLLHQWS+ANGMVTHQGFIEHYPGPFPFYDANGLID
Sbjct:   59 DLVLISGDLVDFGHPDEYATFKQILAELTLPVYLIPGNHDDRQNLRDAFPEHRYLFQHTDYLQWVVDDYPVSIVGLDSSVPGKPHGELSEASLQWLDATLAEQPEKPTLVMVHHHPFVSGIDHMDRQPLQHANALAEVIGKYAQVERVLCGHLHRSIQARFANTMAISCPGVSHQVSLDLTPDGPASFQLEPPGYLLHQWSSANGMVTHQGFIEHYPGPFPFYDANGLID 288          
BLAST of mRNA_E-siliculosus-1a_F_contig14751.2773.1 vs. uniprot
Match: UPI001F0DF10A (phosphodiesterase n=1 Tax=Halomonas neptunia TaxID=115551 RepID=UPI001F0DF10A)

HSP 1 Score: 435 bits (1118), Expect = 5.470e-153
Identity = 200/230 (86.96%), Postives = 216/230 (93.91%), Query Frame = 1
Query:    1 DLVLISGDLVDFGLPEEYATFKQLLAELTLPVYLIPGNHDDRQHLRKAFPDHRYLFQYQDYLQWVVDDYPVRIVGLDSSVPGKPHGELSEASLQWLDATLAEQPTKPTLVMVHHHPFVSGIDHMDRQPLRHASALAAVIGKHTHVERVLCGHLHRSIQARFANTLAVSCPGVSHQVSLDLNPDGPSSFQLEPPGYLLHQWSTANGMVTHQGFIEHYPGPFPFYDANGLID 690
            DLVLISGDLVDFGLPEEYATFKQ+LAELTLPVYLIPGNHD+RQHL  AFP+HRYLFQ+  YLQWVVDDYPVR++GLDSSVPGKPHGELS+ SL WLDATLAE+P KPTLVMVHHHPFVSGIDHMDRQPL+ ++ALA VIG+H+ VERVLCGHLHRS+QARF NTLA+SCPGVSHQVSLDLNPDGPS F LEPPGYLLHQWS ANGM+THQGFIEHYPGPFPFYDANGLID
Sbjct:   53 DLVLISGDLVDFGLPEEYATFKQILAELTLPVYLIPGNHDERQHLCAAFPEHRYLFQHHHYLQWVVDDYPVRLIGLDSSVPGKPHGELSDESLAWLDATLAEKPEKPTLVMVHHHPFVSGIDHMDRQPLKQSTALAEVIGQHSQVERVLCGHLHRSVQARFGNTLAISCPGVSHQVSLDLNPDGPSRFLLEPPGYLLHQWSAANGMITHQGFIEHYPGPFPFYDANGLID 282          
BLAST of mRNA_E-siliculosus-1a_F_contig14751.2773.1 vs. uniprot
Match: A0A0D6E910_9GAMM (3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA n=19 Tax=Halomonas TaxID=2745 RepID=A0A0D6E910_9GAMM)

HSP 1 Score: 429 bits (1102), Expect = 1.860e-150
Identity = 200/230 (86.96%), Postives = 213/230 (92.61%), Query Frame = 1
Query:    1 DLVLISGDLVDFGLPEEYATFKQLLAELTLPVYLIPGNHDDRQHLRKAFPDHRYLFQYQDYLQWVVDDYPVRIVGLDSSVPGKPHGELSEASLQWLDATLAEQPTKPTLVMVHHHPFVSGIDHMDRQPLRHASALAAVIGKHTHVERVLCGHLHRSIQARFANTLAVSCPGVSHQVSLDLNPDGPSSFQLEPPGYLLHQWSTANGMVTHQGFIEHYPGPFPFYDANGLID 690
            DLVLISGDLVDFG  +EYATFKQ+LAELTLPVY+IPGNHDDR HLR AFP+HRYLFQ++DYLQWV++DYPVR+VGLDSSVPGKPHGELS+ SLQ LD TLAEQP KPTLVMVHHHPFVSGIDHMDRQPL+   ALA VIGKH  VERVLCGHLHRSIQARFANTLA+SCPGVSHQVSLDL+PDGPSSFQLEPPGYLLHQWS  NGMVTHQGFIE YPGPFPFYDANGLID
Sbjct:   59 DLVLISGDLVDFGHSDEYATFKQILAELTLPVYVIPGNHDDRDHLRAAFPEHRYLFQHRDYLQWVIEDYPVRLVGLDSSVPGKPHGELSDESLQXLDTTLAEQPEKPTLVMVHHHPFVSGIDHMDRQPLKRPDALADVIGKHAQVERVLCGHLHRSIQARFANTLAISCPGVSHQVSLDLSPDGPSSFQLEPPGYLLHQWSATNGMVTHQGFIERYPGPFPFYDANGLID 288          
BLAST of mRNA_E-siliculosus-1a_F_contig14751.2773.1 vs. uniprot
Match: A0A117KHP9_9GAMM (Metallophosphoesterase n=1 Tax=Halomonas sp. 54_146 TaxID=1635257 RepID=A0A117KHP9_9GAMM)

HSP 1 Score: 425 bits (1093), Expect = 4.360e-149
Identity = 197/230 (85.65%), Postives = 211/230 (91.74%), Query Frame = 1
Query:    1 DLVLISGDLVDFGLPEEYATFKQLLAELTLPVYLIPGNHDDRQHLRKAFPDHRYLFQYQDYLQWVVDDYPVRIVGLDSSVPGKPHGELSEASLQWLDATLAEQPTKPTLVMVHHHPFVSGIDHMDRQPLRHASALAAVIGKHTHVERVLCGHLHRSIQARFANTLAVSCPGVSHQVSLDLNPDGPSSFQLEPPGYLLHQWSTANGMVTHQGFIEHYPGPFPFYDANGLID 690
            DLVLISGDLVDFG P+EYATFKQ+LA+LTLPV+L PGNHDDRQHLR AFP+HRYLFQ+ DY+QWVVDDYPVR+VGLDSSVPGKPHGELS+ SL+WLDATLAEQP KPTLVMVHHHPFVSGI HMDRQPL+   ALA VI KH  VERVLCGHLHRSIQ RFANTLA+SCPGVSHQVSLDL PDGPSSFQLEPPGYLLHQWS  NG+VTHQGFIE YPGPFPF+DANGLID
Sbjct:   59 DLVLISGDLVDFGHPDEYATFKQILADLTLPVFLTPGNHDDRQHLRAAFPEHRYLFQHSDYVQWVVDDYPVRLVGLDSSVPGKPHGELSDESLRWLDATLAEQPEKPTLVMVHHHPFVSGIAHMDRQPLKRPDALAEVISKHPQVERVLCGHLHRSIQTRFANTLAISCPGVSHQVSLDLTPDGPSSFQLEPPGYLLHQWSATNGLVTHQGFIERYPGPFPFFDANGLID 288          
BLAST of mRNA_E-siliculosus-1a_F_contig14751.2773.1 vs. uniprot
Match: A0A7Z7MWV8_9GAMM (3',5'-cyclic AMP phosphodiesterase CpdA n=1 Tax=Halomonas sp. hl-4 TaxID=1761789 RepID=A0A7Z7MWV8_9GAMM)

HSP 1 Score: 425 bits (1093), Expect = 4.360e-149
Identity = 195/230 (84.78%), Postives = 212/230 (92.17%), Query Frame = 1
Query:    1 DLVLISGDLVDFGLPEEYATFKQLLAELTLPVYLIPGNHDDRQHLRKAFPDHRYLFQYQDYLQWVVDDYPVRIVGLDSSVPGKPHGELSEASLQWLDATLAEQPTKPTLVMVHHHPFVSGIDHMDRQPLRHASALAAVIGKHTHVERVLCGHLHRSIQARFANTLAVSCPGVSHQVSLDLNPDGPSSFQLEPPGYLLHQWSTANGMVTHQGFIEHYPGPFPFYDANGLID 690
            DLVLISGDLVDFG P+EYATFK +LA+LTLPVYLIPGNHDDR HLR AFP+HRYLFQ++DYLQWVVDDYPVR+VGLDSSVPGKPHGELS+ SLQWLD TL+EQP KPTLVMVHHHPF+SGIDHMDRQPL+   ALA VIG+H  VER+LCGHLHRSIQARFANTLA+SCPGVSHQVSLDL PDGP+ FQLEPPGYLLH WS  +GMVTHQGFIEHYPGPFPFYDA+GLID
Sbjct:   59 DLVLISGDLVDFGHPDEYATFKHILADLTLPVYLIPGNHDDRHHLRNAFPEHRYLFQHRDYLQWVVDDYPVRLVGLDSSVPGKPHGELSDESLQWLDTTLSEQPDKPTLVMVHHHPFMSGIDHMDRQPLKRPDALADVIGQHPQVERMLCGHLHRSIQARFANTLAISCPGVSHQVSLDLTPDGPAHFQLEPPGYLLHHWSATSGMVTHQGFIEHYPGPFPFYDASGLID 288          
BLAST of mRNA_E-siliculosus-1a_F_contig14751.2773.1 vs. uniprot
Match: UPI001CF374CA (phosphodiesterase n=1 Tax=Halomonas sp. SBBP1 TaxID=2599306 RepID=UPI001CF374CA)

HSP 1 Score: 424 bits (1091), Expect = 8.790e-149
Identity = 196/230 (85.22%), Postives = 211/230 (91.74%), Query Frame = 1
Query:    1 DLVLISGDLVDFGLPEEYATFKQLLAELTLPVYLIPGNHDDRQHLRKAFPDHRYLFQYQDYLQWVVDDYPVRIVGLDSSVPGKPHGELSEASLQWLDATLAEQPTKPTLVMVHHHPFVSGIDHMDRQPLRHASALAAVIGKHTHVERVLCGHLHRSIQARFANTLAVSCPGVSHQVSLDLNPDGPSSFQLEPPGYLLHQWSTANGMVTHQGFIEHYPGPFPFYDANGLID 690
            DLVLISGDLVDFG P+EYATFKQLLA+LTLPVYLIPGNHDDRQHLR AFP+HRYLFQ++DYLQWVVDDYPVR++GLDSSVP KPHG+LS+ SL+WLD TL EQP KPTLVMVHHHPFVSGIDHMDRQPL+   ALA VIGKH  +ERVLCGHLHRSIQARFANTL +SCPGVSHQVSLDL PDGP+ FQLEPPGYLLHQWS ANGMVTHQGFI+ Y GPFPFYDANGLID
Sbjct:   59 DLVLISGDLVDFGHPDEYATFKQLLADLTLPVYLIPGNHDDRQHLRHAFPEHRYLFQHRDYLQWVVDDYPVRLIGLDSSVPDKPHGKLSDESLEWLDTTLTEQPDKPTLVMVHHHPFVSGIDHMDRQPLKRPEALADVIGKHPQIERVLCGHLHRSIQARFANTLVISCPGVSHQVSLDLTPDGPAHFQLEPPGYLLHQWSAANGMVTHQGFIDPYSGPFPFYDANGLID 288          
BLAST of mRNA_E-siliculosus-1a_F_contig14751.2773.1 vs. uniprot
Match: A0A1A9R813_9GAMM (Phosphodiesterase n=4 Tax=unclassified Halomonas TaxID=2609666 RepID=A0A1A9R813_9GAMM)

HSP 1 Score: 421 bits (1081), Expect = 2.930e-147
Identity = 196/230 (85.22%), Postives = 208/230 (90.43%), Query Frame = 1
Query:    1 DLVLISGDLVDFGLPEEYATFKQLLAELTLPVYLIPGNHDDRQHLRKAFPDHRYLFQYQDYLQWVVDDYPVRIVGLDSSVPGKPHGELSEASLQWLDATLAEQPTKPTLVMVHHHPFVSGIDHMDRQPLRHASALAAVIGKHTHVERVLCGHLHRSIQARFANTLAVSCPGVSHQVSLDLNPDGPSSFQLEPPGYLLHQWSTANGMVTHQGFIEHYPGPFPFYDANGLID 690
            DLVLISGDLVDFG P+EYATF Q+LA+L LPVYLIPGNHDDRQHLR AFP+HRYLFQ+  YLQWVVDDYPVR+VGLDSSVP KPHGELS+ SLQWLD TLA QP KPTLVMVHHHPFVSGIDHMDRQPL+   ALA VIG+H  VERVLCGHLHRSIQARFANTLA+SCPGVSHQVSLDL PDGP+ FQLEPPGYLLH WS ANGMVTHQGFI+ YPGPFPFYDANGLID
Sbjct:   59 DLVLISGDLVDFGHPDEYATFTQILADLVLPVYLIPGNHDDRQHLRAAFPEHRYLFQHNGYLQWVVDDYPVRLVGLDSSVPDKPHGELSDESLQWLDKTLAAQPDKPTLVMVHHHPFVSGIDHMDRQPLKRPEALADVIGQHAQVERVLCGHLHRSIQARFANTLAISCPGVSHQVSLDLTPDGPAHFQLEPPGYLLHHWSAANGMVTHQGFIDSYPGPFPFYDANGLID 288          
BLAST of mRNA_E-siliculosus-1a_F_contig14751.2773.1 vs. uniprot
Match: A0A2A3XET4_9GAMM (Phosphodiesterase n=2 Tax=Halomonas TaxID=2745 RepID=A0A2A3XET4_9GAMM)

HSP 1 Score: 417 bits (1073), Expect = 4.850e-146
Identity = 193/230 (83.91%), Postives = 210/230 (91.30%), Query Frame = 1
Query:    1 DLVLISGDLVDFGLPEEYATFKQLLAELTLPVYLIPGNHDDRQHLRKAFPDHRYLFQYQDYLQWVVDDYPVRIVGLDSSVPGKPHGELSEASLQWLDATLAEQPTKPTLVMVHHHPFVSGIDHMDRQPLRHASALAAVIGKHTHVERVLCGHLHRSIQARFANTLAVSCPGVSHQVSLDLNPDGPSSFQLEPPGYLLHQWSTANGMVTHQGFIEHYPGPFPFYDANGLID 690
            +LVLISGDLVDFG PEEYATFK +L++LTLPVYLIPGNHDDRQ LR AFP+HRYLFQ++D+L WV+DDYPVR+VGLDSSVPGKP+GELS ASL+WLD  L EQP KPTLVMVHHHPFVSGIDHMD+QPL+HASAL  VIGKH  VERVLCGHLHRSIQARF NTLA+SCPGVSHQVSLDL PDGPS FQLEPPGYLLHQWS A+GM+THQGFI  YPGPFPFYDANGLID
Sbjct:   59 NLVLISGDLVDFGHPEEYATFKHILSDLTLPVYLIPGNHDDRQSLRAAFPEHRYLFQHRDFLHWVIDDYPVRLVGLDSSVPGKPYGELSNASLEWLDKILTEQPEKPTLVMVHHHPFVSGIDHMDQQPLKHASALENVIGKHAQVERVLCGHLHRSIQARFGNTLAISCPGVSHQVSLDLTPDGPSRFQLEPPGYLLHQWSAAHGMITHQGFIACYPGPFPFYDANGLID 288          
BLAST of mRNA_E-siliculosus-1a_F_contig14751.2773.1 vs. uniprot
Match: A0A6F8X6L7_9GAMM (3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA n=2 Tax=Halomonas TaxID=2745 RepID=A0A6F8X6L7_9GAMM)

HSP 1 Score: 417 bits (1071), Expect = 1.210e-145
Identity = 197/229 (86.03%), Postives = 205/229 (89.52%), Query Frame = 1
Query:    4 LVLISGDLVDFGLPEEYATFKQLLAELTLPVYLIPGNHDDRQHLRKAFPDHRYLFQYQDYLQWVVDDYPVRIVGLDSSVPGKPHGELSEASLQWLDATLAEQPTKPTLVMVHHHPFVSGIDHMDRQPLRHASALAAVIGKHTHVERVLCGHLHRSIQARFANTLAVSCPGVSHQVSLDLNPDGPSSFQLEPPGYLLHQWSTANGMVTHQGFIEHYPGPFPFYDANGLID 690
            LVLISGDLVDFG PEEYATFKQL+AELTLPVYLIPGNHDDRQHLR AFPDHRYLFQ+QDYLQWVVDDYPVR+VGLDSSVPGKPHGELS  SLQWLDATLAE P KPTLVMVHHHPFVSGI HMDRQPL    ALA VI KH  VERVLCGHLHRSIQARFANTLA+SCPGVSHQVSLDL P+GP+ FQLEP GYLLH WS  +G VTHQGFI+ YPGPFPFYD NGLID
Sbjct:   66 LVLISGDLVDFGHPEEYATFKQLMAELTLPVYLIPGNHDDRQHLRAAFPDHRYLFQHQDYLQWVVDDYPVRLVGLDSSVPGKPHGELSNESLQWLDATLAEHPEKPTLVMVHHHPFVSGIGHMDRQPLNRPDALADVIRKHDQVERVLCGHLHRSIQARFANTLAMSCPGVSHQVSLDLTPNGPAHFQLEPTGYLLHHWSATHGTVTHQGFIDQYPGPFPFYDENGLID 294          
BLAST of mRNA_E-siliculosus-1a_F_contig14751.2773.1 vs. uniprot
Match: A0A1R4HWW0_9GAMM (3',5'-cyclic-nucleotide phosphodiesterase n=5 Tax=Halomonas TaxID=2745 RepID=A0A1R4HWW0_9GAMM)

HSP 1 Score: 401 bits (1031), Expect = 7.890e-140
Identity = 186/230 (80.87%), Postives = 202/230 (87.83%), Query Frame = 1
Query:    1 DLVLISGDLVDFGLPEEYATFKQLLAELTLPVYLIPGNHDDRQHLRKAFPDHRYLFQYQDYLQWVVDDYPVRIVGLDSSVPGKPHGELSEASLQWLDATLAEQPTKPTLVMVHHHPFVSGIDHMDRQPLRHASALAAVIGKHTHVERVLCGHLHRSIQARFANTLAVSCPGVSHQVSLDLNPDGPSSFQLEPPGYLLHQWSTANGMVTHQGFIEHYPGPFPFYDANGLID 690
            DLVLISGDLVDFG P+EYATFKQ+LAELTLPVYLIPGNHDDR HLR AFP+H YLFQ   YLQWV+DDYPVR+VGLDSSVPG+P+GELSE SL WLD TLAEQP  PTLVM+HHHPF+SGIDHMDRQPL+   ALA +I KH  VERVLCGH+HR+IQARF NTLA+SCPGVSH VSLDL PD PS FQLEPPGYLLHQWS   GMVTHQGFI+ YPGP+PFYDANGLID
Sbjct:   47 DLVLISGDLVDFGHPDEYATFKQILAELTLPVYLIPGNHDDRDHLRTAFPEHDYLFQDAHYLQWVIDDYPVRLVGLDSSVPGEPYGELSEESLCWLDKTLAEQPQTPTLVMLHHHPFISGIDHMDRQPLKQPHALAEIINKHAQVERVLCGHVHRTIQARFGNTLAISCPGVSHYVSLDLTPDSPSRFQLEPPGYLLHQWSAEAGMVTHQGFIKQYPGPYPFYDANGLID 276          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig14751.2773.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1U9R9A9_9GAMM1.280e-15790.87Phosphodiesterase n=2 Tax=root TaxID=1 RepID=A0A1U... [more]
UPI001F0DF10A5.470e-15386.96phosphodiesterase n=1 Tax=Halomonas neptunia TaxID... [more]
A0A0D6E910_9GAMM1.860e-15086.963',5'-cyclic adenosine monophosphate phosphodieste... [more]
A0A117KHP9_9GAMM4.360e-14985.65Metallophosphoesterase n=1 Tax=Halomonas sp. 54_14... [more]
A0A7Z7MWV8_9GAMM4.360e-14984.783',5'-cyclic AMP phosphodiesterase CpdA n=1 Tax=Ha... [more]
UPI001CF374CA8.790e-14985.22phosphodiesterase n=1 Tax=Halomonas sp. SBBP1 TaxI... [more]
A0A1A9R813_9GAMM2.930e-14785.22Phosphodiesterase n=4 Tax=unclassified Halomonas T... [more]
A0A2A3XET4_9GAMM4.850e-14683.91Phosphodiesterase n=2 Tax=Halomonas TaxID=2745 Rep... [more]
A0A6F8X6L7_9GAMM1.210e-14586.033',5'-cyclic adenosine monophosphate phosphodieste... [more]
A0A1R4HWW0_9GAMM7.890e-14080.873',5'-cyclic-nucleotide phosphodiesterase n=5 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig14751contigE-siliculosus-1a_F_contig14751:2..694 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start0
Stop1
Cds size693
Model size693
Exons1
Hectar predicted targeting categoryother localisation
BRITEko00000,ko00001,ko00002,ko01000
Best eggNOG OGNA|NA|NA
Best tax levelGammaproteobacteria
COG Functional cat.S
EC2.1.2.2,3.1.4.53
EggNOG OGs1MWKX@1224,1RYA3@1236,COG1409@1,COG1409@2
EggNOG free text desc.Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
KEGG ModuleM00048
KEGG Pathwayko00230,ko00670,ko01100,ko01110,ko01130,ko02025,map00230,map00670,map01100,map01110,map01130,map02025
KEGG ReactionR00191,R04325,R04326
KEGG koko:K03651,ko:K11175
KEGG rclassRC00026,RC00197,RC00296,RC01128
Preferred namecpdA
Seed eggNOG ortholog1415755.JQLV01000001_gene2839
Seed ortholog evalue1.4e-119
Seed ortholog score435.6
Taxonomic scopeBacteria
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927985.002789-CDS-E-siliculosus-1a_F_contig14751:1..6941622927985.002789-CDS-E-siliculosus-1a_F_contig14751:1..694Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig14751 2..694 +
1696318763.2527134-CDS-E-siliculosus-1a_F_contig14751:1..6941696318763.2527134-CDS-E-siliculosus-1a_F_contig14751:1..694Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig14751 2..694 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig14751.2773.1prot_E-siliculosus-1a_F_contig14751.2773.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig14751 2..694 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig14751.2773.1

>prot_E-siliculosus-1a_F_contig14751.2773.1 ID=prot_E-siliculosus-1a_F_contig14751.2773.1|Name=mRNA_E-siliculosus-1a_F_contig14751.2773.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=231bp
DLVLISGDLVDFGLPEEYATFKQLLAELTLPVYLIPGNHDDRQHLRKAFP
DHRYLFQYQDYLQWVVDDYPVRIVGLDSSVPGKPHGELSEASLQWLDATL
AEQPTKPTLVMVHHHPFVSGIDHMDRQPLRHASALAAVIGKHTHVERVLC
GHLHRSIQARFANTLAVSCPGVSHQVSLDLNPDGPSSFQLEPPGYLLHQW
STANGMVTHQGFIEHYPGPFPFYDANGLID*
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mRNA from alignment at E-siliculosus-1a_F_contig14751:2..694+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig14751.2773.1 ID=mRNA_E-siliculosus-1a_F_contig14751.2773.1|Name=mRNA_E-siliculosus-1a_F_contig14751.2773.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=693bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig14751:2..694+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GATCTGGTATTGATTAGCGGTGACCTAGTCGATTTTGGGCTCCCCGAAGA GTACGCCACCTTTAAACAACTCTTGGCCGAGTTAACGCTGCCCGTGTATC TAATTCCCGGTAATCACGATGACCGTCAACATCTACGCAAGGCCTTCCCA GACCATCGCTACCTATTTCAGTACCAGGACTATTTGCAGTGGGTCGTGGA TGACTACCCGGTACGCATTGTTGGGCTCGACTCATCTGTACCCGGTAAAC CCCATGGGGAGTTAAGCGAAGCAAGTCTTCAGTGGCTAGATGCAACGCTA GCAGAGCAGCCCACTAAGCCTACGTTGGTCATGGTACATCACCACCCTTT TGTCAGCGGGATCGACCATATGGATCGCCAGCCGCTTCGTCATGCAAGCG CACTAGCAGCGGTGATTGGCAAGCATACCCACGTAGAGCGCGTGCTCTGC GGGCATCTGCATCGCTCGATTCAAGCCCGCTTCGCTAACACCTTAGCAGT TAGCTGCCCTGGCGTTTCCCACCAGGTTAGCCTGGATCTGAATCCAGACG GTCCCTCCAGCTTTCAGCTCGAACCTCCCGGCTACTTACTGCACCAGTGG TCAACGGCTAATGGCATGGTGACCCACCAAGGGTTTATCGAGCACTATCC AGGCCCTTTCCCGTTCTATGACGCTAATGGGCTAATTGATTAA
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig14751:2..694+

>mRNA_E-siliculosus-1a_F_contig14751.2773.1 ID=mRNA_E-siliculosus-1a_F_contig14751.2773.1|Name=mRNA_E-siliculosus-1a_F_contig14751.2773.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1386bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig14751:2..694+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GATCTGGTATTGATTAGCGGTGACCTAGTCGATTTTGGGCTCCCCGAAGA
GTACGCCACCTTTAAACAACTCTTGGCCGAGTTAACGCTGCCCGTGTATC
TAATTCCCGGTAATCACGATGACCGTCAACATCTACGCAAGGCCTTCCCA
GACCATCGCTACCTATTTCAGTACCAGGACTATTTGCAGTGGGTCGTGGA
TGACTACCCGGTACGCATTGTTGGGCTCGACTCATCTGTACCCGGTAAAC
CCCATGGGGAGTTAAGCGAAGCAAGTCTTCAGTGGCTAGATGCAACGCTA
GCAGAGCAGCCCACTAAGCCTACGTTGGTCATGGTACATCACCACCCTTT
TGTCAGCGGGATCGACCATATGGATCGCCAGCCGCTTCGTCATGCAAGCG
CACTAGCAGCGGTGATTGGCAAGCATACCCACGTAGAGCGCGTGCTCTGC
GGGCATCTGCATCGCTCGATTCAAGCCCGCTTCGCTAACACCTTAGCAGT
TAGCTGCCCTGGCGTTTCCCACCAGGTTAGCCTGGATCTGAATCCAGACG
GTCCCTCCAGCTTTCAGCTCGAACCTCCCGGCTACTTACTGCACCAGTGG
TCAACGGCTAATGGCATGGTGACCCACCAAGGGTTTATCGAGCACTATCC
AGGCCCTTTCCCGTTCTATGACGCTAATGGGCTAATTGATTAAGATCTGG
TATTGATTAGCGGTGACCTAGTCGATTTTGGGCTCCCCGAAGAGTACGCC
ACCTTTAAACAACTCTTGGCCGAGTTAACGCTGCCCGTGTATCTAATTCC
CGGTAATCACGATGACCGTCAACATCTACGCAAGGCCTTCCCAGACCATC
GCTACCTATTTCAGTACCAGGACTATTTGCAGTGGGTCGTGGATGACTAC
CCGGTACGCATTGTTGGGCTCGACTCATCTGTACCCGGTAAACCCCATGG
GGAGTTAAGCGAAGCAAGTCTTCAGTGGCTAGATGCAACGCTAGCAGAGC
AGCCCACTAAGCCTACGTTGGTCATGGTACATCACCACCCTTTTGTCAGC
GGGATCGACCATATGGATCGCCAGCCGCTTCGTCATGCAAGCGCACTAGC
AGCGGTGATTGGCAAGCATACCCACGTAGAGCGCGTGCTCTGCGGGCATC
TGCATCGCTCGATTCAAGCCCGCTTCGCTAACACCTTAGCAGTTAGCTGC
CCTGGCGTTTCCCACCAGGTTAGCCTGGATCTGAATCCAGACGGTCCCTC
CAGCTTTCAGCTCGAACCTCCCGGCTACTTACTGCACCAGTGGTCAACGG
CTAATGGCATGGTGACCCACCAAGGGTTTATCGAGCACTATCCAGGCCCT
TTCCCGTTCTATGACGCTAATGGGCTAATTGATTAA
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