mRNA_E-siliculosus-1a_F_contig1473.2764.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_E-siliculosus-1a_F_contig1473.2764.1
Unique Name	mRNA_E-siliculosus-1a_F_contig1473.2764.1
Type	mRNA
Organism	Ectocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)

Homology

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BLAST of mRNA_E-siliculosus-1a_F_contig1473.2764.1 vs. uniprot
Match: D7FIG1_ECTSI (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIG1_ECTSI)

HSP 1 Score: 1449 bits (3750), Expect = 0.000e+0
Identity = 775/869 (89.18%), Postives = 786/869 (90.45%), Query Frame = 2

Query:    2 QFMNTTDKYDASKEPDPLKSKARLAFNFPAKGRAGDQLEIATKYLTERVAFCADLPLEQVAAMAAAIELRGLTVPGRRVVGIFSHVFRRGRECFGEAYIMFTGTADQIGGDKSGDRLITEGDLFGDEYFSVAVKDVLGIPFRTATVMTRTAPCELLVVPARECRRLRAFVALRNSQKAMAIFDKFFINLPRDVCSEIASLATFRTIKMNQKLAEDGDEVSTVFFVVRGECVSKSRKQLHKQPGKGDEEEEAQRYGPGDIVGWPYLMPGPPARGRSPIVARTAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRRNTKEWHCSITVTTPAQVLSVPLAALLSFLSERAMKGLRRYIAHTHKQKLGGPSSSSHSGGLGDEESLDGESELGEFFSGHGGYDRNSPTLFSGGGTWKAKRTTGRMSPPVARLRPSTAPELIALTTAIPTEECESRRPNTTASPGGVQALIEGISSRDNWPRXXXXXXXXXXXRVGLTDSIANRISTAPQGTHNLRRSLRSAPSSSSSSPPVIWGYARVAERGIGGHGGEAEARGGRCSCPMESCRVCSPLDRLERLRNTTIWTPSLPSRSYKSASAPSAVARSFASGCTIRNTGTIAQVKTTTDTPGNTLSVELNPSTFRPATTPYVHHAGKAHVAHPTGGIAAGDEAFGGKPTLWGGWGLPSSKIGGTGSGVVAKGSDGAHSGTSTSGNKLAEGAHVGFRSRRTSPAGQGGAVIAVADAPATAAVAPMSDFGVTNTNLGRGARREPDSGSEMSLPPVAATLPPDQPHLARLSYTLVQLSTRAALDPYEPSANLCLRILGSFACEKEATTRVSNLYRSILPPSSVSTAKYTSQSRLRAEKCVYVEWSPIP 2608
            QF NTTDKYDASKEPD LKSKARLAFNFPAKGRAGDQLEIA KYLTERVAFCADLPLEQVAAMAAAIELRGLTVPGR       HVFRRGRECFGEAYIMFTGTADQIGGDKSGDRLITEGDLFGDEYFSVAVKDVLGIPFRTATVMTRTAPCELLVVPARECRRLRAFVALRNS+KAMAIFDKFFINLPR VCSEIASLATFRTIKMNQKLAEDGDEVSTVFFVVRGECVSKS KQLH+QPGKG EEEEAQRYGPGDIVGWPYLMP PPARGRSPIVARTAA                                SRRN KEWHCSITVTTPAQVLSVPLAALLSFLSERAMKGLRRYIAHTHKQKL GPSSSSHSGGLGDEESLDGESELGEFFSGHGGYDRN+PTLFSGGGTWK +R TGRMSPPVARLRPSTAPELIAL TAI +EECESRRPN T  PGGV ALIEGISSRDNWPRXXXXXXXXXXXRVGLTDSIA+RISTAPQG HNLRRSL+SAPSSSSSSPPVIWGYARVAERGIGGHG EAEARGGRCSCPMESCRVCSPLDRLERLRNTTIWTPSLPSRS K ASAPSAVARSFASGCT RN GTIAQ+K TTDTPGNTLSVEL  STFRPAT PYVHHAGKAHVAHPTGGIAAGDEAFGGKPTLWGGWGLPSSKIGGTG G VAKGSDGAH GTSTSGNKLA GAHVGF  RRTSPAGQGGAVIAVADAPATAAVAPMSDFGVTNT+LGRGARREPDSGSEMSLPP AATLPPDQPHLARLSYTLVQLSTRAALDP+EP ANLCLRILGSFACEKEATTRVSNLYRSILPPSSVSTAK+TSQSRLRAE        P P
Sbjct:  196 QFTNTTDKYDASKEPDHLKSKARLAFNFPAKGRAGDQLEIAIKYLTERVAFCADLPLEQVAAMAAAIELRGLTVPGR-------HVFRRGRECFGEAYIMFTGTADQIGGDKSGDRLITEGDLFGDEYFSVAVKDVLGIPFRTATVMTRTAPCELLVVPARECRRLRAFVALRNSEKAMAIFDKFFINLPRGVCSEIASLATFRTIKMNQKLAEDGDEVSTVFFVVRGECVSKSSKQLHQQPGKGHEEEEAQRYGPGDIVGWPYLMPRPPARGRSPIVARTAAITTTPQKTAIGGSAEDKPNTPPEGNEQERKRRSRRNAKEWHCSITVTTPAQVLSVPLAALLSFLSERAMKGLRRYIAHTHKQKLEGPSSSSHSGGLGDEESLDGESELGEFFSGHGGYDRNAPTLFSGGGTWKDQRKTGRMSPPVARLRPSTAPELIALKTAIQSEECESRRPNITVLPGGVHALIEGISSRDNWPRXXXXXXXXXXXRVGLTDSIADRISTAPQGIHNLRRSLQSAPSSSSSSPPVIWGYARVAERGIGGHGDEAEARGGRCSCPMESCRVCSPLDRLERLRNTTIWTPSLPSRSTKPASAPSAVARSFASGCTTRNIGTIAQMKATTDTPGNTLSVELKASTFRPATRPYVHHAGKAHVAHPTGGIAAGDEAFGGKPTLWGGWGLPSSKIGGTGHGAVAKGSDGAHGGTSTSGNKLAGGAHVGFHDRRTSPAGQGGAVIAVADAPATAAVAPMSDFGVTNTSLGRGARREPDSGSEMSLPPAAATLPPDQPHLARLSYTLVQLSTRAALDPHEPLANLCLRILGSFACEKEATTRVSNLYRSILPPSSVSTAKHTSQSRLRAENVSKSSGRPSP 1057

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig1473.2764.1 vs. uniprot
Match: A0A6H5L5Z7_9PHAE (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5Z7_9PHAE)

HSP 1 Score: 1107 bits (2863), Expect = 0.000e+0
Identity = 628/858 (73.19%), Postives = 658/858 (76.69%), Query Frame = 2

Query:    2 QFMNTTDKYDASKEPDPLKSKARLAFNFPAKGRAGDQLEIATKYLTERVAFCADLPLEQVAAMAAAIELR--GLTVPGRRVVGIFSHVFRRGRECFGEAYIMFTGTADQIGGDKSGDRLITEGDLFGDEYFSVAVKDVLGIPFRTATVMTRTAPCELLVVPARECRRLRAFVALRNSQKAMAIFDKFFINLPRDVCSEIASLATFRTIKMNQKLAEDGDEVSTVFFVVRGECVSKSRKQLHKQPGKGDEEEEAQRYGPGDIVGWPYLMPGPPARGRSPIVARTAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRRNTKEWHCSITVTTPAQVLSVPLAALLSFLSERAMKGLRRYIAHTHKQKLGGPSSSSHSGGLGDEESLDGESELGEFFSGHGGYDRNSPTLFSGGGTWKAKRTTGRMSPPVARLRPSTAPELIALTTAIPTEECESRRPNTTASPGGVQALIEGISSRDNWPRXXXXXXXXXXXRVGLTDSIANRISTAPQGTHNLRRSLRSAPSSSSSSP-PVIWGYARVAERGIGGHGGEAEARGGRCSCPMESCRVCSPLDRLERLRNTTIWTPSLPSRSYKSASAPSAVARSFASGCTIRNTGTIAQVKTTTDTPGNTLSVELNPSTFRPATTPYVHHAGKAHVAHPTGGIAAGDEAFGGKPTLWGGWGLPSSKIGGTGSGVVAKGSDGAHSGTSTSGNKLAEGAHVGFRSRRTSPAGQGGAVIAVADAPATAAVAPMSDFGVTNTNLGRGARREPDSGSEMSLPPVAATLPPDQPHLARLSYTLVQLSTRAALDPYEPSANLCLRILGSFACEKEATTRVSNLYRSILPPSSVSTAKYTSQSRL 2566
            QF+NTT+KYDA KEPDPLKSKARLAFNFPAKGRAGDQL+IA KYLTERVAFCADLPLEQ+    A+I L    L    R       HV    RE                            GDLFGDEY SVAVK VLGIPFRTATVMTRTAPCELLVVPARECRRLRAFVALRNS+KAMAIFDKFFINLP+ VCSEIASLATFRTIKMNQKLAEDGDEVSTVFFVVRGECVSKS KQ H+QPG G EEEEAQRYGPGDIVGW   +                                                  +R TK+                             +  + RYIA+THKQKL GPSS SHSGGLGD+ESLDGESELGEFFSGHGG DRN+PTLFSGGGTWK +R TG+MSPPV RLR           T IPTEECESRRPNT ASP GVQAL++GISSRDNWPRXXXXXXXXXXXRVGLTDS A+ ISTAPQGTH LRRSL+SAPSS      PVIWGYARVA RGI GHG EAEARGGRCSCPMESCRVC+PLDRLERLRNTTIWTPSLPSRS K ASAPSAVARSFASGCT+RNTGTIAQ K TTDTPGNTLS+EL  ST RP  TPYVHHAGKAHV HPTGG AAGDEAFGGK TLWGGWGLPSSKIGGTG+GVVAKG DGAH GTSTSGNKLA+GAHVGF  RRTSPAGQGGAVIAVADAP TAAVAPMSDFGVTNT+LGRG RREPDSGSE+SLPP AA LPPDQPHLARLSYTLVQLSTRAALDP EPSANLCLRILGSFACEK+ATTRVSNLYRSILPPSSVSTAKYTSQSRL
Sbjct:  213 QFLNTTEKYDALKEPDPLKSKARLAFNFPAKGRAGDQLKIAIKYLTERVAFCADLPLEQMPTRLASIPLPYDSLDATSR------FHVLCACRE----------------------------GDLFGDEYLSVAVKHVLGIPFRTATVMTRTAPCELLVVPARECRRLRAFVALRNSEKAMAIFDKFFINLPKGVCSEIASLATFRTIKMNQKLAEDGDEVSTVFFVVRGECVSKSSKQFHRQPGTGKEEEEAQRYGPGDIVGWEQGV------------------------------------------QMAVEGVPKRRTKQ---------------------------PRLGSVARYIAYTHKQKLQGPSSLSHSGGLGDDESLDGESELGEFFSGHGGCDRNAPTLFSGGGTWKDQRKTGKMSPPVTRLR-----------TVIPTEECESRRPNTAASPVGVQALLDGISSRDNWPRXXXXXXXXXXXRVGLTDSTADPISTAPQGTHKLRRSLQSAPSSXXXXXXPVIWGYARVAGRGIDGHGDEAEARGGRCSCPMESCRVCTPLDRLERLRNTTIWTPSLPSRSTKPASAPSAVARSFASGCTMRNTGTIAQTKATTDTPGNTLSLELKRSTSRPGLTPYVHHAGKAHVIHPTGGKAAGDEAFGGKSTLWGGWGLPSSKIGGTGNGVVAKGGDGAHGGTSTSGNKLAKGAHVGFHDRRTSPAGQGGAVIAVADAPVTAAVAPMSDFGVTNTSLGRGDRREPDSGSEISLPPAAAILPPDQPHLARLSYTLVQLSTRAALDPSEPSANLCLRILGSFACEKKATTRVSNLYRSILPPSSVSTAKYTSQSRL 956

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_F_contig1473.2764.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_F_contig1473.2764.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FIG1_ECTSI	0.000e+0	89.18	Cyclic nucleotide-binding domain-containing protei...	[more]
A0A6H5L5Z7_9PHAE	0.000e+0	73.19	Cyclic nucleotide-binding domain-containing protei...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_F_contig1473	contig	E-siliculosus-1a_F_contig1473:236..8410 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female	2021-02-24

Properties


Property Name	Value
Start	1
Stop	1
Cds size	2622
Model size	2629
Exons	12
Ec32 ortholog	Ec-28_000140.4
Ec32 ortholog description	RmlC-like jelly roll fold
Hectar predicted targeting category	other localisation
Ec32 ortholog	Ec-28_000140.2

Relationships

The following CDS feature(s) are a part of this mRNA:

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622927983.542365-UTR-E-siliculosus-1a_F_contig1473:8403..8410	1622927983.542365-UTR-E-siliculosus-1a_F_contig1473:8403..8410	Ectocarpus siliculosus Ec863f_EcPH12_90f female	UTR	E-siliculosus-1a_F_contig1473 8404..8410 -
1696318762.6498816-UTR-E-siliculosus-1a_F_contig1473:8403..8410	1696318762.6498816-UTR-E-siliculosus-1a_F_contig1473:8403..8410	Ectocarpus siliculosus Ec863f_EcPH12_90f female	UTR	E-siliculosus-1a_F_contig1473 8404..8410 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_F_contig1473.2764.1	prot_E-siliculosus-1a_F_contig1473.2764.1	Ectocarpus siliculosus Ec863f_EcPH12_90f female	polypeptide	E-siliculosus-1a_F_contig1473 236..8403 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at E-siliculosus-1a_F_contig1473:236..8410-
coding sequence from alignment at E-siliculosus-1a_F_contig1473:236..8410-

protein sequence of mRNA_E-siliculosus-1a_F_contig1473.2764.1

>prot_E-siliculosus-1a_F_contig1473.2764.1 ID=prot_E-siliculosus-1a_F_contig1473.2764.1|Name=mRNA_E-siliculosus-1a_F_contig1473.2764.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=874bp
MNTTDKYDASKEPDPLKSKARLAFNFPAKGRAGDQLEIATKYLTERVAFC
ADLPLEQVAAMAAAIELRGLTVPGRRVVGIFSHVFRRGRECFGEAYIMFT
GTADQIGGDKSGDRLITEGDLFGDEYFSVAVKDVLGIPFRTATVMTRTAP
CELLVVPARECRRLRAFVALRNSQKAMAIFDKFFINLPRDVCSEIASLAT
FRTIKMNQKLAEDGDEVSTVFFVVRGECVSKSRKQLHKQPGKGDEEEEAQ
RYGPGDIVGWPYLMPGPPARGRSPIVARTAASTTTPQKTAIGGGAEDRPN
TPPEGNQQERKRRSRRNTKEWHCSITVTTPAQVLSVPLAALLSFLSERAM
KGLRRYIAHTHKQKLGGPSSSSHSGGLGDEESLDGESELGEFFSGHGGYD
RNSPTLFSGGGTWKAKRTTGRMSPPVARLRPSTAPELIALTTAIPTEECE
SRRPNTTASPGGVQALIEGISSRDNWPRPRPSTRTRWRWRVGLTDSIANR
ISTAPQGTHNLRRSLRSAPSSSSSSPPVIWGYARVAERGIGGHGGEAEAR
GGRCSCPMESCRVCSPLDRLERLRNTTIWTPSLPSRSYKSASAPSAVARS
FASGCTIRNTGTIAQVKTTTDTPGNTLSVELNPSTFRPATTPYVHHAGKA
HVAHPTGGIAAGDEAFGGKPTLWGGWGLPSSKIGGTGSGVVAKGSDGAHS
GTSTSGNKLAEGAHVGFRSRRTSPAGQGGAVIAVADAPATAAVAPMSDFG
VTNTNLGRGARREPDSGSEMSLPPVAATLPPDQPHLARLSYTLVQLSTRA
ALDPYEPSANLCLRILGSFACEKEATTRVSNLYRSILPPSSVSTAKYTSQ
SRLRAEKCVYVEWSPIPLTNLRT*

mRNA from alignment at E-siliculosus-1a_F_contig1473:236..8410-

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_E-siliculosus-1a_F_contig1473.2764.1 ID=mRNA_E-siliculosus-1a_F_contig1473.2764.1|Name=mRNA_E-siliculosus-1a_F_contig1473.2764.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=8175bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1473:236..8410- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CCAATTCATGAACACGACAGACAAATACGACGCATCGAAGGAACCCGACC
CCCTTAAGAGCAAGGCCCGCTTGGCTTTCAACTTTCCGGCGAAAGGAAGG
GCGGGAGATCAACTCGAAATCGCGACCAAGTACCTGACGGAGAGGGTGAG
ATGGATCGCTATTGGTGAAACTGATTTCCCTACGTCTCCTGCGCAGCACA
GCTTTTCGGTGCAAGGTCATCCGTTGATGAGCTTTGGGGCGACTGGCGAA
GTGCTTCATTTTAGATAGGAAAACGTCCTGGAAATCTGGGTTTTGATACC
AACAATTCGAGACGCACTTGGAAATGTTACCAACCTCGTTCAAGACGCGT
AGTTAATAGCAAAGACCGCTTTCACCAACACTGACTCCAAGTACTATCGG
CCCGCATCATTTTACTTGTGACGACGGACAGCAGGTTACTGCAGAATTTT
AATTTACAATGCGGGAGATGTTCAGGGTAAGGTCAGAACTCTATCATACG
GGTGAAGACAACAACAGTACCAACAAAAACGCTTCCACAACTAAATTCAA
GCGAACTGGGGTCACATTCGTTGGAGAGGTTCGTCCTCAAACGTTCACCC
GGGGCTCAAAGCCGTGAAAATGAAACCGATGAACACCCGTGATATCTGTG
TTTTGTGATGGGGGGTAGATCCGTCTTGACGCCCTTTAGCTGTCACACTC
ACTATTCCAAGATGAACGACAAAATACCTCTGTAGGAATCCGGACGTCAT
CGCTTTGAGTTTTCTTTGGGCCTAGATACTTTTATAGGTGTGCGTCGAAG
GCAAGACACGAGTATCAGCATAATGGAGCTACTTCAACCTCTGCCCTGGG
TATGAAATCTATGAATATCGACGTGAAAATTCTGCAAACGTTTACAGGGA
TGCATCAACGTATCCACAAAGGACCCTCCTCATCATTCTATTGATAGTTG
GATTTCTACAGACGATTACTGTCCTCAACGTATCCCGTCAGTGCTCTGGT
CGTTGTGGATTACGCCATGAGATGTATTCATTGCGTTCACGTGTTCTGTT
CCACGAAGTGACGGCCCGCTGATGGTCTGAGATTTGATCTACATACCCTT
GGACCCGCCAACGTATTCCAGAGGTGCCCCCTCTTGTCAGATCCACCACC
GTTCTCTATTTATCGCACAGGTGGCGTTCTGCGCTGATCTACCACTGGAG
CAGGTAGCTGCCATGGCCGCAGCAATTGAGCTACGCGGATTGACAGTTCC
AGGCAGGCGCGTTGTTGGTATTTTTTCGTTTGTGCGGACACATAACAAAT
GAAACGAAAACACAACGGTCGTTCAGCAACATTCCGGAATTGGCATTAAA
GATTGCGCTATTTAGAAACAGCTGCGTTATACGTTCGTGCAAAATCGGTT
CGATGCGGGTAGGCGTGTGAACAATGAAAGTTCCAAACTCGGCAAGCGAC
AAGAAACAGCAAATCTAGGCAAATGCGTTGAGAGTGGAATGAGTCCCGCA
CCCCGGACTCAGATTCAGAGTCGGGAACAAACCAACCACGTACCACACGT
TTTTTTGTTTTCCAGGCATGTCTTTCGGAGAGGGCGCGAGTGCTTCGGTG
AGGCATACATCATGTTCACTGGAACTGCCGACCAGATCGGCGGCGATAAA
TCGGGGGATAGACTGATAACGTGAGTGAGTGTACGCACGTGGTCTGATCT
CGCCTGTATTTTCTCTACACTGCCCTTGTCTTTAAATGCAAAAGTACTCG
AGTAAACCCGTCTTGCGCCCAGAGTTTCGCAGGCGCTCATTGTTGTGTAT
CACGGAGGTCGTAGAAAGCTACAGGCTGGCACGTTGAGAAACAATGCGCG
CCTCCTTTTGAAGTTAAGTAGTTTAGCAACAACTCCGCTCACAGTTGGTT
TCCGAGTTCAACAGCGACGTTTCCCCGCAAAACGCAACTTGCGTGGCTCG
AACACCTGGTGTTTGGTGACTGGCACGGTCTGCAGTGGACACGAAAGGTG
TAGATGCCAACCAGGTTGGTTTCAGCTTCGATTCCCCTCCCCAACGACAG
TCTCGATGCTACGCCGCGTTTCCACGTGCTGTATGCATGCAGAGAGGGAG
ATCTGTTCGGTGATGAGTACTTCTCGGTGGCCGTGAAGGATGTGCTGGGC
ATCCCGTTTCGGACGGCCACGGTCATGACCCGGACGGCTCCCTGTGAGCT
TCTCGTGGTTCCCGCCAGGTGAGAATGAAGCGTTGGACAAAAGAAAACAC
GGCGTCAGAGAGTTACTCCTCGCCTACATCGGATTCCCGCTAGTCTTCAT
AGGGTGAAGCACGGTATAGGTAATCACGTGAGCATCTGATCGTCTCGAGT
CTTCAGGCAACCGTGGCTTTGAGTACGTCAATAACATGCTTCGTACACGT
AGTCTGCGGTCAAAAATTGGCGTCTGCCAGCCTGAATAGACCAGCCTACA
TAGACCAATGCGAGGTCTGTCGTTAAAGAGAAGGGTGACCCCGGCGCTTT
CCTTCCCAGCATATTGGTGGCCAACAACGACCTGTTACCCGTGCGCACCT
CCCATGTGCTGGCTTGCTTCGCCAGGGAATGCCGCCGTCTGCGTGCCTTT
GTGGCTCTTCGCAATAGCCAGAAGGCCATGGCAATATTCGACAAGGTGAA
GAACCAAGGACGTATTCTCGAGGAGAAAACCGCGTACCTGTTTTTCTCTG
AAGAATGCGGAGCACCATGCAGCCTTGTGATATCAACTTATTCTCTGGTC
AATCAAAAGTTGTTGACTAGAACATATTGTTAGCTTTTCCTCTGTATCAT
CCAGGACAGTAACGATGCTACCGTAGCGTCAGAAAGGCTTGCGAAGCGGT
GCTTTTCCGCTCGATTACCTGAACAAAGCGGTACAACCCTTACATTTCTT
TGTTCAATTTCTGACGTTGCTTGACTAACCCATCAGCTGTGGTTCGCTTG
ATCCCGTCAACTGATCGACATATGTCGCTGACATGCTGTGGCTGCGACTC
TACCAACGTCTTGATTTACAGGGAGGCATAAATTTTTCCGAACGGCGTTG
TTGTATTTCATGGCGCTCTTTGTGTTGGTTAGCTTCCAGAATTCAACGTT
CTCTCGCGTCTACCTTTTAAAACCTCATGCACTCCTTACGATGATTGACG
CTGTAACCGATGGGAATTGCAATCATTTTTTTATTTCTCTTAGTACTCGC
TCTTCAGTGGTAAGTTAGCCGACGTCAATGGATTCGTTCACCATGAGCGG
GCATTCTCTTCACCATCCAGTCTTCAGCCTCCAAGTCTACCCAAGTGTTC
ATATTGTGCAGGCGAACCTCTACAACGTTTTCAGTTTGGCAGAGTGAACG
AACCACTTTCTCCCACATGTTTCTGAAAACCCACGCGTCTCTGTCTTTCT
CTACCTGCCTCTGCCTCTCCATCTCGTTCTCTCCCCCGTTTTTTCTATAT
TTTCCCTCCTGTGCCGGCGGCAGTTTTTCATAAACCTCCCGAGAGATGTC
TGCTCTGAGATCGCCTCTCTCGCCACATTTCGCACGATTAAGATGAATCA
AAAGCTAGCGGAAGATGGGGATGAGGTCTCAACTGTCTTCTTTGTCGTTC
GAGGCGAGTGCGTCTCGAAGTCGAGAAAACAGCTTCACAAGCAGCCAGGC
AAGGGCGACGAGGAGGAGGAGGCCCAGCGGTACGGCCCCGGAGACATTGT
AGGCTGGTGAGAGGTTGTGTTTGGCGTATAAACTAGGCTTATGAAGTTGA
CAACAGACGATTGGATAGAACGTCATCTTTTGAATGCCTCGTCTCTAGAA
GATGAAACCCGCCTGTTAGGGTTAGGTTAGATTTTGACTCCCCGTCTAGC
TATCGCCGATTTTCTGCTGTGTGAATATATTGATTGCTACAGGACATGTT
CTTGGGGTTGGCAATGTTGGGAAACACAATGAAGTGGCTCCAGCAGGACG
CAAATCAATGAAATCATTGCACAAGGAAACGATAAGACTTGACAACGTCC
CGGGCCGCAAGTGAATCGTTGCCTTTTACATACGTAGCAGGTCATTCTGT
GTGAAAAACAACTGTATAGGGAGCAAGGCCGGGCAGATGGCCGTCGAAGG
TAGACCCTGTCGATTTATCAGGAGGGGAAGGGGAGTAGCGCTGAATCGAA
TTTTCGAGACTCTCCCCAACCTCAATCCTTTCATCGCACCTGGCGGAGGG
CAAACGTTTGTGTTTTGATTTTCTTTTCTATTGATGCGCTTGTTCGTCAG
GCCATATTTGATGCCCGGACCGCCAGCACGTGGGCGTAGTCCAATTGTCG
CGAGAACGGCGGCCAGTACGACGACACCACAAAAGACAGCGATCGGCGGG
GGTGCCGAGGATAGACCGAACACGCCACCGGAAGGAAATCAACAGGAACG
GAAGCGGAGGTCTCGTCGCAACACCAAGGTGCCTGAAAGCTGTCCTTGCA
AACCCCTGCCATCGGGTAATTTCATGCCCCTCTGTCACCAACGAAATGCC
CCGTTCCTACACGCGTTCGATGCCTTCGTGTACGCCACGTCATGACCCAG
GCGCGTACCAAGGCACGTTAGGCGTGCCAAAACGACGAACCAAACAGCCC
CGCCTCGGCTCCGTCAACTATGTACGCGAACGCCTCTACTACGTCACGTG
CGTACGCGAAATGGGCATAAGCACGGATACAAGTCTGATCGAATACTACC
AATATAATAGTTCCGTCTCTAAACCGAACGGTGAATGAATGCCTCCTTTG
CAAGCCGGAGGTGACTGATTCTCTGCATGGTTGCATGCCTGCGTGTGTAG
GAGTGGCACTGTTCGATCACAGTGACAACCCCGGCACAAGTGCTTTCGGT
CCCGTTGGCCGCCCTCCTCAGCTTTCTATCGGAGAGGGCCATGAAGGGGT
TGAGGTCAGTGGGAAAGGAAACCGTTTCTGTTGGCGGACTTGAACCATTT
TCGAGCACTTCTATGTCACTTTCGCTAGCTCAAATTTCGATGCGTGCCCA
ATTGGATGGGCGGAAGGAAATCGCAGACTATGATGTGTTGCCGAGGGCGA
ATGATAAGAAAGAAGCGCTGCGAGCTCGGTTACAGAACAGTGGCTGAATG
GTGCAGTTGCCTAGCTCGAACCCTTGGCTCTACGATGTGAGCTTGAATCT
CCCCGAAGCGAGAAAACTCGCAAATATGAACTGAAAAGCGCATAGGAGTC
CACACAACACAAGAGGGATTGATACACCCTTCTCGTCCAGAATGTTGAAC
GCAAGCACCGCAGGAGGAAAGGTGAAATAATCCTCCTCGGTAACTCCAGG
CTGGTGGGCTAAGCTTAATAAATGAATCTGCGAGGGTTATTTCGCGTTTT
AGGATGATTTTTCTCGACAACCGGACTTGCCTAAAACTCACAAGTTGAAC
GTTTCGGACGGTGCTTCTGCAACCCATGGACGGGTGTGTGTCTACCCGTT
GCTCTGACAAGGTAGCACCAAGACATGTATCATACTACTCGAACGGACAG
TATAAACCTTTGGCTACGGCTTCAACCCCTCACCCCTACAAACCACCACG
CTGCCCTCGCGCCTCTACGTCCACCCATTCCCGGGTATTTTCCTGAAACC
TGTCCTCGGGGTACAGGAGGTACATTGCGCACACGCACAAGCAGAAATTG
GGGGGACCTTCGTCTTCATCGCATTCGGGCGGTCTCGGCGACGAGGAGAG
TTTAGATGGAGAGAGTGAATTGGGGGAATTTTTCAGCGGCCACGGGGGAT
ACGACCGAAACTCCCCAACGCTGTTCTCTGGTGGCGGCACATGGAAAGCT
AAAAGAACAACAGGGAGGATGTCTCCTCCCGTGGCCCGACTAAGGTACTG
ATATCTACAACGGGAGAATGCCCGTTCTTCTCTCTTTTCTCTCCGTGCCC
CAAAATGGCACGTGGTGCTTTAGCTTTCCTCCTGCGTGTTGGTGTAGTGA
GAGGCCCAAACCCCTCCGGATACCTAGCAAGAGATCCTCCGGAGCTCGTT
GCATCTACTAGAGCGATGTTTCACTATTGGCTACCACACGCAAGAATGTC
TACTCTTCCACACCCGGCACAGGTTCACCGCTTGTTTTGCCTCTCTCGGT
TCGCATGGCTACAACTCACGGGCAGTTAGCTGTAGCTCTATCATCGTAAT
CACCCAAACCCAGTCTCCTTCTCTTCCGCCCCTGCAAAGACCATCAACGG
CACCAGAACTGATCGCCTTGACGACGGCGATCCCAACCGAAGAGTGCGAA
AGCCGGCGCCCAAACACAACAGCCTCGCCCGGAGGGGTACAGGCTCTAAT
TGAGGGGATATCAAGCCGAGACAACTGGCCCCGGCCGCGACCGAGCACCC
GCACGCGCTGGCGTTGGCGCGTGGGCTTGACGGATTCTATCGCAAACCGA
ATCTCGACCGCCCCGCAGGGGACCCACAACTTGAGACGTAGCCTGCGGTC
CGCGCCGAGTTCGTCATCGTCGTCGCCGCCTGTGATCTGGGGCTACGCTA
GAGTAGCGGAGCGAGGGATCGGCGGGCACGGGGGCGAGGCAGAAGCACGC
GGCGGGCGCTGCTCCTGCCCGATGGAAAGCTGCCGCGTTTGCTCGCCGTT
GGACAGGTGACAGACGGCCGGGGACGAACTGTTCTTAGTTGCACTTGTTC
GAAAACACGATCCTAGGGTTTCGACCAGTTTCCATCACGCAGTGATCATT
TGGCTTCAGAGTGAAAAATTGATTACGACAGAGCTAAGCAGTGCATGTTG
TTGATGATCTACCCTCTCGTCAAGAACCACGCATACGAAATGCCACTTCA
TACATAGCGTGGATCCCCCCGCCACAGCTTTGTCCACCTTGTTCACGAAC
CACGTTGACGCTCGGGAATTGTGGTACTGCCAGGCTTGAGCGACTGCGAA
ATACCACCATCTGGACCCCGTCACTACCATCACGCTCATACAAGTCCGCC
AGCGCACCTTCTGCGGTGGCCCGAAGCTTTGCGAGCGGCTGCACCATACG
AAACACAGGCACCATAGCCCAAGTGAAGACCACTACGGATACTCCTGGGA
ACACACTCTCCGTGGAGCTAAACCCGTCGACGTTCCGTCCCGCGACCACA
CCATACGTCCATCACGCCGGCAAGGCCCATGTCGCTCACCCGACGGGTGG
CATAGCAGCGGGAGATGAGGCCTTTGGCGGAAAACCCACTCTATGGGGAG
GGTGGGGATTGCCTTCGTCCAAGATCGGTGGCACAGGTAGTGGGGTCGTT
GCCAAGGGCAGTGATGGTGCCCATAGTGGGACATCGACAAGCGGAAACAA
ACTCGCGGAGGGCGCCCACGTGGGCTTCCGTAGTCGCCGTACATCACCAG
CTGGTCAGGGAGGAGCGGTGATTGCTGTCGCCGATGCCCCCGCCACGGCC
GCCGTCGCGCCGATGTCGGACTTCGGCGTCACCAATACAAATCTAGGACG
AGGTGCTCGCCGTGAACCAGACTCGGGAAGCGAAATGTCCTTACCTCCAG
TCGCTGCAACACTTCCACCGGATCAACCACACCTTGCACGGCTTTCATAC
ACCCTCGTGCAGCTCAGCACAAGGTGCGTTCGTGCGCCGTCGGTTGGTAT
TGCTGTTGCCACCGGAAGCACGTGTTCCGCGGTTTACGTATGTATTTGCG
GGTTGTTTCTTCTTTGTACGTTATCTCGTGATATTCTCTGCCGTTGCAGG
CACACATTTGTAAGTCTGTCCATGCCTTCACGAGGAACGAGAGATCATAC
AAGCGCTGATGGAACAAGTGGTCGTGCGCAACTGTTATACTCACGAGTGT
GTAGCGCGTTGTGCTGAGCTGCTTCATTGTATAAACTTGACTTTACTCTT
AAGGTTGTTACCTTGTCGAGCTGCCAGCCAATGCTAGCCGAGCCCTGAAA
TTCGATGTATCACAAACTCTCTGGCCGCCTTCACGACAAAATCTTGCAGG
GCGGCATTGGACCCTTACGAGCCATCGGCAAACCTATGCCTCCGAATCTT
GGGCTCCTTCGCTTGCGAGAAGGAAGCCACGACGCGCGTGTCAAACCTTT
ACCGTTCCATTCTCCCGCCGTCAAGCGTGAGTACCGCAAAATATACCTCG
CAGTCCAGGCTTCGAGCCGAAAAATGTGTCTACGTCGAGTGGTCGCCCAT
CCCCCTGACCAATCTCCGAACCTAG

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1473:236..8410-

>mRNA_E-siliculosus-1a_F_contig1473.2764.1 ID=mRNA_E-siliculosus-1a_F_contig1473.2764.1|Name=mRNA_E-siliculosus-1a_F_contig1473.2764.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=5244bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1473:236..8410- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGAACACGACAGACAAATACGACGCATCGAAGGAACCCGACCCCCTTAA
GAGCAAGGCCCGCTTGGCTTTCAACTTTCCGGCGAAAGGAAGGGCGGGAG
ATCAACTCGAAATCGCGACCAAGTACCTGACGGAGAGGATGAACACGACA
GACAAATACGACGCATCGAAGGAACCCGACCCCCTTAAGAGCAAGGCCCG
CTTGGCTTTCAACTTTCCGGCGAAAGGAAGGGCGGGAGATCAACTCGAAA
TCGCGACCAAGTACCTGACGGAGAGGGTGGCGTTCTGCGCTGATCTACCA
CTGGAGCAGGTAGCTGCCATGGCCGCAGCAATTGAGCTACGCGGATTGAC
AGTTCCAGGCAGGCGCGTTGTTGGTATTTTTTCGTGGCGTTCTGCGCTGA
TCTACCACTGGAGCAGGTAGCTGCCATGGCCGCAGCAATTGAGCTACGCG
GATTGACAGTTCCAGGCAGGCGCGTTGTTGGTATTTTTTCGCATGTCTTT
CGGAGAGGGCGCGAGTGCTTCGGTGAGGCATACATCATGTTCACTGGAAC
TGCCGACCAGATCGGCGGCGATAAATCGGGGGATAGACTGATAACGCATG
TCTTTCGGAGAGGGCGCGAGTGCTTCGGTGAGGCATACATCATGTTCACT
GGAACTGCCGACCAGATCGGCGGCGATAAATCGGGGGATAGACTGATAAC
AGAGGGAGATCTGTTCGGTGATGAGTACTTCTCGGTGGCCGTGAAGGATG
TGCTGGGCATCCCGTTTCGGACGGCCACGGTCATGACCCGGACGGCTCCC
TGTGAGCTTCTCGTGGTTCCCGCCAGAGAGGGAGATCTGTTCGGTGATGA
GTACTTCTCGGTGGCCGTGAAGGATGTGCTGGGCATCCCGTTTCGGACGG
CCACGGTCATGACCCGGACGGCTCCCTGTGAGCTTCTCGTGGTTCCCGCC
AGGGAATGCCGCCGTCTGCGTGCCTTTGTGGCTCTTCGCAATAGCCAGAA
GGCCATGGCAATATTCGACAAGGGAATGCCGCCGTCTGCGTGCCTTTGTG
GCTCTTCGCAATAGCCAGAAGGCCATGGCAATATTCGACAAGTTTTTCAT
AAACCTCCCGAGAGATGTCTGCTCTGAGATCGCCTCTCTCGCCACATTTC
GCACGATTAAGATGAATCAAAAGCTAGCGGAAGATGGGGATGAGGTCTCA
ACTGTCTTCTTTGTCGTTCGAGGCGAGTGCGTCTCGAAGTCGAGAAAACA
GCTTCACAAGCAGCCAGGCAAGGGCGACGAGGAGGAGGAGGCCCAGCGGT
ACGGCCCCGGAGACATTGTAGGCTGTTTTTCATAAACCTCCCGAGAGATG
TCTGCTCTGAGATCGCCTCTCTCGCCACATTTCGCACGATTAAGATGAAT
CAAAAGCTAGCGGAAGATGGGGATGAGGTCTCAACTGTCTTCTTTGTCGT
TCGAGGCGAGTGCGTCTCGAAGTCGAGAAAACAGCTTCACAAGCAGCCAG
GCAAGGGCGACGAGGAGGAGGAGGCCCAGCGGTACGGCCCCGGAGACATT
GTAGGCTGGCCATATTTGATGCCCGGACCGCCAGCACGTGGGCGTAGTCC
AATTGTCGCGAGAACGGCGGCCAGTACGACGACACCACAAAAGACAGCGA
TCGGCGGGGGTGCCGAGGATAGACCGAACACGCCACCGGAAGGAAATCAA
CAGGAACGGAAGCGGAGGTCTCGTCGCAACACCAAGGCCATATTTGATGC
CCGGACCGCCAGCACGTGGGCGTAGTCCAATTGTCGCGAGAACGGCGGCC
AGTACGACGACACCACAAAAGACAGCGATCGGCGGGGGTGCCGAGGATAG
ACCGAACACGCCACCGGAAGGAAATCAACAGGAACGGAAGCGGAGGTCTC
GTCGCAACACCAAGGAGTGGCACTGTTCGATCACAGTGACAACCCCGGCA
CAAGTGCTTTCGGTCCCGTTGGCCGCCCTCCTCAGCTTTCTATCGGAGAG
GGCCATGAAGGGGTTGAGGAGTGGCACTGTTCGATCACAGTGACAACCCC
GGCACAAGTGCTTTCGGTCCCGTTGGCCGCCCTCCTCAGCTTTCTATCGG
AGAGGGCCATGAAGGGGTTGAGGAGGTACATTGCGCACACGCACAAGCAG
AAATTGGGGGGACCTTCGTCTTCATCGCATTCGGGCGGTCTCGGCGACGA
GGAGAGTTTAGATGGAGAGAGTGAATTGGGGGAATTTTTCAGCGGCCACG
GGGGATACGACCGAAACTCCCCAACGCTGTTCTCTGGTGGCGGCACATGG
AAAGCTAAAAGAACAACAGGGAGGATGTCTCCTCCCGTGGCCCGACTAAG
GAGGTACATTGCGCACACGCACAAGCAGAAATTGGGGGGACCTTCGTCTT
CATCGCATTCGGGCGGTCTCGGCGACGAGGAGAGTTTAGATGGAGAGAGT
GAATTGGGGGAATTTTTCAGCGGCCACGGGGGATACGACCGAAACTCCCC
AACGCTGTTCTCTGGTGGCGGCACATGGAAAGCTAAAAGAACAACAGGGA
GGATGTCTCCTCCCGTGGCCCGACTAAGACCATCAACGGCACCAGAACTG
ATCGCCTTGACGACGGCGATCCCAACCGAAGAGTGCGAAAGCCGGCGCCC
AAACACAACAGCCTCGCCCGGAGGGGTACAGGCTCTAATTGAGGGGATAT
CAAGCCGAGACAACTGGCCCCGGCCGCGACCGAGCACCCGCACGCGCTGG
CGTTGGCGCGTGGGCTTGACGGATTCTATCGCAAACCGAATCTCGACCGC
CCCGCAGGGGACCCACAACTTGAGACGTAGCCTGCGGTCCGCGCCGAGTT
CGTCATCGTCGTCGCCGCCTGTGATCTGGGGCTACGCTAGAGTAGCGGAG
CGAGGGATCGGCGGGCACGGGGGCGAGGCAGAAGCACGCGGCGGGCGCTG
CTCCTGCCCGATGGAAAGCTGCCGCGTTTGCTCGCCGTTGGACAGACCAT
CAACGGCACCAGAACTGATCGCCTTGACGACGGCGATCCCAACCGAAGAG
TGCGAAAGCCGGCGCCCAAACACAACAGCCTCGCCCGGAGGGGTACAGGC
TCTAATTGAGGGGATATCAAGCCGAGACAACTGGCCCCGGCCGCGACCGA
GCACCCGCACGCGCTGGCGTTGGCGCGTGGGCTTGACGGATTCTATCGCA
AACCGAATCTCGACCGCCCCGCAGGGGACCCACAACTTGAGACGTAGCCT
GCGGTCCGCGCCGAGTTCGTCATCGTCGTCGCCGCCTGTGATCTGGGGCT
ACGCTAGAGTAGCGGAGCGAGGGATCGGCGGGCACGGGGGCGAGGCAGAA
GCACGCGGCGGGCGCTGCTCCTGCCCGATGGAAAGCTGCCGCGTTTGCTC
GCCGTTGGACAGGCTTGAGCGACTGCGAAATACCACCATCTGGACCCCGT
CACTACCATCACGCTCATACAAGTCCGCCAGCGCACCTTCTGCGGTGGCC
CGAAGCTTTGCGAGCGGCTGCACCATACGAAACACAGGCACCATAGCCCA
AGTGAAGACCACTACGGATACTCCTGGGAACACACTCTCCGTGGAGCTAA
ACCCGTCGACGTTCCGTCCCGCGACCACACCATACGTCCATCACGCCGGC
AAGGCCCATGTCGCTCACCCGACGGGTGGCATAGCAGCGGGAGATGAGGC
CTTTGGCGGAAAACCCACTCTATGGGGAGGGTGGGGATTGCCTTCGTCCA
AGATCGGTGGCACAGGTAGTGGGGTCGTTGCCAAGGGCAGTGATGGTGCC
CATAGTGGGACATCGACAAGCGGAAACAAACTCGCGGAGGGCGCCCACGT
GGGCTTCCGTAGTCGCCGTACATCACCAGCTGGTCAGGGAGGAGCGGTGA
TTGCTGTCGCCGATGCCCCCGCCACGGCCGCCGTCGCGCCGATGTCGGAC
TTCGGCGTCACCAATACAAATCTAGGACGAGGTGCTCGCCGTGAACCAGA
CTCGGGAAGCGAAATGTCCTTACCTCCAGTCGCTGCAACACTTCCACCGG
ATCAACCACACCTTGCACGGCTTTCATACACCCTCGTGCAGCTCAGCACA
AGGCTTGAGCGACTGCGAAATACCACCATCTGGACCCCGTCACTACCATC
ACGCTCATACAAGTCCGCCAGCGCACCTTCTGCGGTGGCCCGAAGCTTTG
CGAGCGGCTGCACCATACGAAACACAGGCACCATAGCCCAAGTGAAGACC
ACTACGGATACTCCTGGGAACACACTCTCCGTGGAGCTAAACCCGTCGAC
GTTCCGTCCCGCGACCACACCATACGTCCATCACGCCGGCAAGGCCCATG
TCGCTCACCCGACGGGTGGCATAGCAGCGGGAGATGAGGCCTTTGGCGGA
AAACCCACTCTATGGGGAGGGTGGGGATTGCCTTCGTCCAAGATCGGTGG
CACAGGTAGTGGGGTCGTTGCCAAGGGCAGTGATGGTGCCCATAGTGGGA
CATCGACAAGCGGAAACAAACTCGCGGAGGGCGCCCACGTGGGCTTCCGT
AGTCGCCGTACATCACCAGCTGGTCAGGGAGGAGCGGTGATTGCTGTCGC
CGATGCCCCCGCCACGGCCGCCGTCGCGCCGATGTCGGACTTCGGCGTCA
CCAATACAAATCTAGGACGAGGTGCTCGCCGTGAACCAGACTCGGGAAGC
GAAATGTCCTTACCTCCAGTCGCTGCAACACTTCCACCGGATCAACCACA
CCTTGCACGGCTTTCATACACCCTCGTGCAGCTCAGCACAAGGGCGGCAT
TGGACCCTTACGAGCCATCGGCAAACCTATGCCTCCGAATCTTGGGCTCC
TTCGCTTGCGAGAAGGAAGCCACGACGCGCGTGTCAAACCTTTACCGTTC
CATTCTCCCGCCGTCAAGCGTGAGTACCGCAAAATATACCTCGCAGTCCA
GGCTTCGAGCCGAAAAATGTGTCTACGTCGAGTGGTCGCCCATCCCCCTG
ACCAATCTCCGAACCTAGGGCGGCATTGGACCCTTACGAGCCATCGGCAA
ACCTATGCCTCCGAATCTTGGGCTCCTTCGCTTGCGAGAAGGAAGCCACG
ACGCGCGTGTCAAACCTTTACCGTTCCATTCTCCCGCCGTCAAGCGTGAG
TACCGCAAAATATACCTCGCAGTCCAGGCTTCGAGCCGAAAAATGTGTCT
ACGTCGAGTGGTCGCCCATCCCCCTGACCAATCTCCGAACCTAG