mRNA_E-siliculosus-1a_F_contig14715.2762.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig14715.2762.1 vs. uniprot
Match: A0A6H5KXS7_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXS7_9PHAE) HSP 1 Score: 348 bits (893), Expect = 7.760e-113 Identity = 183/203 (90.15%), Postives = 190/203 (93.60%), Query Frame = 1
Query: 130 ALEELRPPSLPDMAAVPAGALELPRSSYVERAAVQEVADGLTALEDPRAPYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAKNSLLALLQGLAREMGAAPTDSPHAVPHVLDSLEQVQQHLAAVAPTGTSPRLVVLDDVWEREVVDAFAPLGFKVLLTTRDRSVVGVPAGRLELGDMTEEEAVELLRKTSGTV 738
AL L PPSLPDMAAVPAGALELP SSYVERAAVQEVADGLT+ EDPRAPYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAK+SLLALLQGLAREMGAA TD+PH VPHVLD LEQV+QHLAAVA TGT PRLVVLDDVWEREVVDAF PLGFKVLLTTRDRSVV VPAGRLE+GDMTEEEA+ELLRK+SG V
Sbjct: 193 ALPSLLPPSLPDMAAVPAGALELPCSSYVERAAVQEVADGLTSPEDPRAPYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLAREMGAARTDAPHTVPHVLDGLEQVKQHLAAVASTGTFPRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVVVPAGRLEVGDMTEEEALELLRKSSGAV 395
BLAST of mRNA_E-siliculosus-1a_F_contig14715.2762.1 vs. uniprot
Match: D7G722_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G722_ECTSI) HSP 1 Score: 349 bits (895), Expect = 2.890e-108 Identity = 182/203 (89.66%), Postives = 189/203 (93.10%), Query Frame = 1
Query: 130 ALEELRPPSLPDMAAVPAGALELPRSSYVERAAVQEVADGLTALEDPRAPYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAKNSLLALLQGLAREMGAAPTDSPHAVPHVLDSLEQVQQHLAAVAPTGTSPRLVVLDDVWEREVVDAFAPLGFKVLLTTRDRSVVGVPAGRLELGDMTEEEAVELLRKTSGTV 738
AL L PPSLPDMAAVP GALELP SSYVERAAVQEVADGLT E+ RAPYTVVGMGGGGKSVLASA VRKPSVREHFRGGIFWVRVGRGAK+SLLALLQGLA ++GAAPTD+PH VPHVLD LEQVQQHLAAVA TGTSPRLVVLDDVWEREVVDAF PLGFKVLLTTRDRSVVG+PAGRLELGDMTEEEA+ELLRKTSGTV
Sbjct: 247 ALPSLLPPSLPDMAAVPTGALELPSSSYVERAAVQEVADGLTTPEESRAPYTVVGMGGGGKSVLASAAVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLAWDVGAAPTDAPHGVPHVLDRLEQVQQHLAAVASTGTSPRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGLPAGRLELGDMTEEEALELLRKTSGTV 449
BLAST of mRNA_E-siliculosus-1a_F_contig14715.2762.1 vs. uniprot
Match: D7G720_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G720_ECTSI) HSP 1 Score: 343 bits (879), Expect = 4.090e-105 Identity = 181/203 (89.16%), Postives = 189/203 (93.10%), Query Frame = 1
Query: 130 ALEELRPPSLPDMAAVPAGALELPRSSYVERAAVQEVADGLTALEDPRAPYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAKNSLLALLQGLAREMGAAPTDSPHAVPHVLDSLEQVQQHLAAVAPTGTSPRLVVLDDVWEREVVDAFAPLGFKVLLTTRDRSVVGVPAGRLELGDMTEEEAVELLRKTSGTV 738
AL L PPSLPDMAAVPAGALELP SSYVERAAVQEVADGLTA E+ RAPYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAK+SLLALLQGLAR++GAAPTD+P VP VLDSLEQV+QHLAAV TGTS RLVVLDDVWEREVVDAF PLGFKVLLTTRDRSVVGVPAGRLELGD+TEEEA+ELLRKTSG V
Sbjct: 230 ALPSLLPPSLPDMAAVPAGALELPSSSYVERAAVQEVADGLTAPEESRAPYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLARDVGAAPTDAPCGVPRVLDSLEQVRQHLAAVTSTGTSQRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGVPAGRLELGDVTEEEALELLRKTSGAV 432
BLAST of mRNA_E-siliculosus-1a_F_contig14715.2762.1 vs. uniprot
Match: D7FUD7_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUD7_ECTSI) HSP 1 Score: 339 bits (870), Expect = 3.190e-104 Identity = 184/237 (77.64%), Postives = 195/237 (82.28%), Query Frame = 1
Query: 28 KSIGEALDAIDRDVVRQFTAIAAKSAINAEAVKIALEELRPPSLPDMAAVPAGALELPRSSYVERAAVQEVADGLTALEDPRAPYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAKNSLLALLQGLAREMGAAPTDSPHAVPHVLDSLEQVQQHLAAVAPTGTSPRLVVLDDVWEREVVDAFAPLGFKVLLTTRDRSVVGVPAGRLELGDMTEEEAVELLRKTSGTV 738
K + + L I DV R AIAAK ++ PPSLPDMA VP GALELP SSYVERAAVQEVADGLT E+PR PYTVVG+GGGGKSVLASAVVR PSVREHFRGGI WVRVGRGAKNSLL LLQGLARE+GAAPTD+PH VPH LDSLEQVQQHLAAVA T SPRLVVLDDVWEREVVDAF PLGFK+LLTTRDRS+V PAGRLELGDMTEEEA+ELLRKTSGTV
Sbjct: 7 KKLEKKLQEIGGDVCRVVDAIAAKRIFT---------DILPPSLPDMAEVPVGALELPHSSYVERAAVQEVADGLTNPEEPRTPYTVVGIGGGGKSVLASAVVRMPSVREHFRGGISWVRVGRGAKNSLLPLLQGLAREVGAAPTDAPHGVPHALDSLEQVQQHLAAVASTRNSPRLVVLDDVWEREVVDAFVPLGFKLLLTTRDRSIVCDPAGRLELGDMTEEEALELLRKTSGTV 234
BLAST of mRNA_E-siliculosus-1a_F_contig14715.2762.1 vs. uniprot
Match: D8LGG5_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGG5_ECTSI) HSP 1 Score: 331 bits (848), Expect = 1.140e-100 Identity = 180/204 (88.24%), Postives = 186/204 (91.18%), Query Frame = 1
Query: 130 ALEELRPPSLPDMAAVPAGALELPRSSYVERAAVQEVADGLTALEDPRAPYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAKNSLLALLQGLAREMGAAPTDSPHAVPHVLDSLEQVQQHLAAV-APTGTSPRLVVLDDVWEREVVDAFAPLGFKVLLTTRDRSVVGVPAGRLELGDMTEEEAVELLRKTSGTV 738
AL LRPP L DMAAVPAGAL+LPR YVERAAVQEVADGLTA E+PRAPYTVVG+GGGGKSVLASAVVRKPSVREHFRGGI WVRVGRGAKNSLL LLQGLAREMG APTD+PHAVP VLDSLEQVQQHLAAV A TGTSPRLVVLDDVWEREVVDA PLGFKVLLTTRD SVV VPA RL+LGDMTEEEA+ELLRKTSGTV
Sbjct: 205 ALPSLRPPRLLDMAAVPAGALDLPRG-YVERAAVQEVADGLTAPEEPRAPYTVVGLGGGGKSVLASAVVRKPSVREHFRGGISWVRVGRGAKNSLLPLLQGLAREMGVAPTDAPHAVPQVLDSLEQVQQHLAAVVASTGTSPRLVVLDDVWEREVVDALVPLGFKVLLTTRDWSVVVVPARRLDLGDMTEEEALELLRKTSGTV 407
BLAST of mRNA_E-siliculosus-1a_F_contig14715.2762.1 vs. uniprot
Match: A0A6H5KU94_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU94_9PHAE) HSP 1 Score: 322 bits (825), Expect = 3.290e-99 Identity = 176/246 (71.54%), Postives = 194/246 (78.86%), Query Frame = 1
Query: 1 KRVNRGTQHKSIGEALDAIDRDVVRQFTAIAAKSAINAEAVKIALEELRPPSLPDMAAVPAGALELPRSSYVERAAVQEVADGLTALEDPRAPYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAKNSLLALLQGLAREMGAAPTDSPHAVPHVLDSLEQVQQHLAAVAPTGTSPRLVVLDDVWEREVVDAFAPLGFKVLLTTRDRSVVGVPAGRLELGDMTEEEAVELLRKTSGTV 738
K + R ++HK + + L ID DV R AI+AK A + PPSLPDMA VPA A+ L S YVERAAV++VADG+T E+PRAPYTV GMGGGGKSVLASAVVRK SVREHFRGGIFW+ VGRGAK LL LLQGL +MGAAPTD+PH VPHVLDSLEQVQ+HL AVA TGTSPRLVVLDDVWEREVVDA PLGFKVL+TTRDRSVVGVP LELGDMTEEEA+ELL KTSGTV
Sbjct: 90 KSITRCSRHKELEKQLQGIDGDVRRVLDAISAKGATGT---------VLPPSLPDMAKVPAEAVALSDSLYVERAAVRKVADGITNPEEPRAPYTVFGMGGGGKSVLASAVVRKSSVREHFRGGIFWLTVGRGAKKRLLPLLQGLTGDMGAAPTDTPHGVPHVLDSLEQVQRHLGAVASTGTSPRLVVLDDVWEREVVDALLPLGFKVLVTTRDRSVVGVPTRCLELGDMTEEEALELLLKTSGTV 326
BLAST of mRNA_E-siliculosus-1a_F_contig14715.2762.1 vs. uniprot
Match: A0A6H5LJA6_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJA6_9PHAE) HSP 1 Score: 293 bits (750), Expect = 3.980e-93 Identity = 155/191 (81.15%), Postives = 168/191 (87.96%), Query Frame = 1
Query: 166 MAAVPAGALELPRSSYVERAAVQEVADGLTALEDPRAPYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAKNSLLALLQGLAREMGAAPTDSPHAVPHVLDSLEQVQQHLAAVAPTGTSPRLVVLDDVWEREVVDAFAPLGFKVLLTTRDRSVVGVPAGRLELGDMTEEEAVELLRKTSGTV 738
MAAVPAGAL LP+S YVERAAVQEVADGL E+PRAPY VVGMGGGGK++L SAVVRK +VREHFRGG+FW+RVGR AKNSLL+LLQGLAREM AAPTD+PH VPHVL+SLEQV+QHLA VA GTSPRLVVLDDVWEREVVDA LG KVL+TTRDRSVVGV G LELGDMTEEEA+ELL KTS TV
Sbjct: 1 MAAVPAGALTLPQS-YVERAAVQEVADGLIKPEEPRAPYAVVGMGGGGKTMLVSAVVRKSNVREHFRGGVFWMRVGRHAKNSLLSLLQGLAREMSAAPTDTPHGVPHVLESLEQVKQHLATVASAGTSPRLVVLDDVWEREVVDALLSLGLKVLVTTRDRSVVGVSGGLLELGDMTEEEALELLLKTSRTV 190
BLAST of mRNA_E-siliculosus-1a_F_contig14715.2762.1 vs. uniprot
Match: D8LPV9_ECTSI (NB-ARC and TPR repeat-containig protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPV9_ECTSI) HSP 1 Score: 275 bits (702), Expect = 1.140e-81 Identity = 172/342 (50.29%), Postives = 195/342 (57.02%), Query Frame = 1
Query: 1 KRVNRGTQHKSIGEALDAIDRDVVRQFTAIAAKSAINA----------------------------------------------------EAVKIALEELR--------------------------------------------PPSLPDMAAVPAGALELPRSSYVERAAVQEVADGLTALEDPRAPYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAKNSLLALLQGLAREMGAAPTDSPHAVPHVLDSLEQVQQHLAAVAPTGTSPRLVVLDDVWEREVVDAFAPLGFKVLLTTRDRSVVGVPAGRLELGDMTEEEAVELLRKTSGTV 738
K+VNRGTQHKSI E LDAID++ + F IA KS+I+ E V + L++L+ PP+LP AAVP GAL LPRS YVER VQE L E APY +VGMGGGGK+VLASA+VRK SV EHFRGGIFW+ +GRGA SLL LQGLAREMGAAPTD+PH VPHV DSLEQV QHLAAV G+SPRLVVLDDVWEREVV AF +G KVL+TTRDRS+VGVP G LELGDM E+EA+ELL KTSGTV
Sbjct: 86 KKVNRGTQHKSIEEDLDAIDKEARQLFGIIATKSSIDTRKTIKQILELQRGPNTVGTPVAIAGGVFAALLVAFAAVILSHRNEISHIDMGEVVGLVLQDLQLEGVRITFASHVSIVAVFGALLVVSSAVIWAQRKAFSTMIRDVLPPTLPQRAAVPTGALALPRS-YVERPGVQEAMGDLMDPEKALAPYMIVGMGGGGKTVLASALVRKSSVLEHFRGGIFWMEMGRGANKSLLHRLQGLAREMGAAPTDAPHGVPHVFDSLEQVMQHLAAVVSRGSSPRLVVLDDVWEREVVAAFLGVGLKVLVTTRDRSIVGVPGGLLELGDMAEDEALELLWKTSGTV 426
BLAST of mRNA_E-siliculosus-1a_F_contig14715.2762.1 vs. uniprot
Match: A0A6H5KQU6_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQU6_9PHAE) HSP 1 Score: 229 bits (583), Expect = 7.430e-67 Identity = 136/213 (63.85%), Postives = 153/213 (71.83%), Query Frame = 1
Query: 103 AINAEAVKIALEEL----RPPSLPDMAAVPAGALELPRSSYVERAAVQEVADGLTALEDPRAPYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAKNSLLALLQGLAREMGAAPTDSPHAVPHVLDSLEQVQQHLAAVAPTGTSPRLVVLDDVWEREVVDAFAPLGFKVLLTTRDRSVVGVPAGRLELGDMTEEEAVELLRKTS 729
A N E V+ LEE+ SL + AAVPAGA LP YV R+ V++ +GL E+P AP+ VVGM G GK+VL SAVVR VREHF GGIFW+RVGRGAK SLL L+Q LAREMGA H VP+VLD LEQV QH+AAVA TGTSPRLVVLDDVWEREVVDA L KVL+TTRD SVVGVP RLE DM E+EA+ELL KTS
Sbjct: 68 AANYEHVESKLEEIDREVARSSLSNRAAVPAGAHGLPHY-YVARSVVRKAVEGLINAEEPSAPFVVVGMSGAGKTVLVSAVVRHLRVREHFHGGIFWMRVGRGAKTSLLPLMQTLAREMGA------HGVPYVLDGLEQVGQHVAAVASTGTSPRLVVLDDVWEREVVDALLRLKLKVLVTTRDHSVVGVPGTRLEPEDMAEDEAMELLLKTS 273
BLAST of mRNA_E-siliculosus-1a_F_contig14715.2762.1 vs. uniprot
Match: A0A6H5JLW6_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLW6_9PHAE) HSP 1 Score: 202 bits (513), Expect = 9.290e-58 Identity = 107/148 (72.30%), Postives = 119/148 (80.41%), Query Frame = 1
Query: 295 MGGGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAKNSLLALLQGLAREMGAAPTDSPHAVPHVLDSLEQVQQHLAAVAPTGTSPRLVVLDDVWEREVVDAFAPLGFKVLLTTRDRSVVGVPAGRLELGDMTEEEAVELLRKTSGTV 738
MGGGG++VL SAVVR+ SV E+FRGGIF + VGRGAKN LL LLQGLAREMGAAP +PH P LDSLE V QHL V TGTSPRLVVLDDV EREVV+A PLG K+++TTRDRSVVGVP G LE+GDMTEEEA+ELL SG V
Sbjct: 1 MGGGGETVLVSAVVRELSVLEYFRGGIFLMSVGRGAKNRLLPLLQGLAREMGAAPAHAPHGNPGDLDSLEHVMQHLTTVVSTGTSPRLVVLDDVLEREVVEALLPLGLKLVVTTRDRSVVGVPGGCLEVGDMTEEEALELLMLASGAV 148 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig14715.2762.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig14715.2762.1 >prot_E-siliculosus-1a_F_contig14715.2762.1 ID=prot_E-siliculosus-1a_F_contig14715.2762.1|Name=mRNA_E-siliculosus-1a_F_contig14715.2762.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=246bp KRVNRGTQHKSIGEALDAIDRDVVRQFTAIAAKSAINAEAVKIALEELRPback to top mRNA from alignment at E-siliculosus-1a_F_contig14715:20..759+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig14715.2762.1 ID=mRNA_E-siliculosus-1a_F_contig14715.2762.1|Name=mRNA_E-siliculosus-1a_F_contig14715.2762.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=740bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig14715:20..759+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig14715:20..759+ >mRNA_E-siliculosus-1a_F_contig14715.2762.1 ID=mRNA_E-siliculosus-1a_F_contig14715.2762.1|Name=mRNA_E-siliculosus-1a_F_contig14715.2762.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1476bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig14715:20..759+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |