mRNA_E-siliculosus-1a_F_contig14715.2762.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig14715.2762.1
Unique NamemRNA_E-siliculosus-1a_F_contig14715.2762.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig14715.2762.1 vs. uniprot
Match: A0A6H5KXS7_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXS7_9PHAE)

HSP 1 Score: 348 bits (893), Expect = 7.760e-113
Identity = 183/203 (90.15%), Postives = 190/203 (93.60%), Query Frame = 1
Query:  130 ALEELRPPSLPDMAAVPAGALELPRSSYVERAAVQEVADGLTALEDPRAPYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAKNSLLALLQGLAREMGAAPTDSPHAVPHVLDSLEQVQQHLAAVAPTGTSPRLVVLDDVWEREVVDAFAPLGFKVLLTTRDRSVVGVPAGRLELGDMTEEEAVELLRKTSGTV 738
            AL  L PPSLPDMAAVPAGALELP SSYVERAAVQEVADGLT+ EDPRAPYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAK+SLLALLQGLAREMGAA TD+PH VPHVLD LEQV+QHLAAVA TGT PRLVVLDDVWEREVVDAF PLGFKVLLTTRDRSVV VPAGRLE+GDMTEEEA+ELLRK+SG V
Sbjct:  193 ALPSLLPPSLPDMAAVPAGALELPCSSYVERAAVQEVADGLTSPEDPRAPYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLAREMGAARTDAPHTVPHVLDGLEQVKQHLAAVASTGTFPRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVVVPAGRLEVGDMTEEEALELLRKSSGAV 395          
BLAST of mRNA_E-siliculosus-1a_F_contig14715.2762.1 vs. uniprot
Match: D7G722_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G722_ECTSI)

HSP 1 Score: 349 bits (895), Expect = 2.890e-108
Identity = 182/203 (89.66%), Postives = 189/203 (93.10%), Query Frame = 1
Query:  130 ALEELRPPSLPDMAAVPAGALELPRSSYVERAAVQEVADGLTALEDPRAPYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAKNSLLALLQGLAREMGAAPTDSPHAVPHVLDSLEQVQQHLAAVAPTGTSPRLVVLDDVWEREVVDAFAPLGFKVLLTTRDRSVVGVPAGRLELGDMTEEEAVELLRKTSGTV 738
            AL  L PPSLPDMAAVP GALELP SSYVERAAVQEVADGLT  E+ RAPYTVVGMGGGGKSVLASA VRKPSVREHFRGGIFWVRVGRGAK+SLLALLQGLA ++GAAPTD+PH VPHVLD LEQVQQHLAAVA TGTSPRLVVLDDVWEREVVDAF PLGFKVLLTTRDRSVVG+PAGRLELGDMTEEEA+ELLRKTSGTV
Sbjct:  247 ALPSLLPPSLPDMAAVPTGALELPSSSYVERAAVQEVADGLTTPEESRAPYTVVGMGGGGKSVLASAAVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLAWDVGAAPTDAPHGVPHVLDRLEQVQQHLAAVASTGTSPRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGLPAGRLELGDMTEEEALELLRKTSGTV 449          
BLAST of mRNA_E-siliculosus-1a_F_contig14715.2762.1 vs. uniprot
Match: D7G720_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G720_ECTSI)

HSP 1 Score: 343 bits (879), Expect = 4.090e-105
Identity = 181/203 (89.16%), Postives = 189/203 (93.10%), Query Frame = 1
Query:  130 ALEELRPPSLPDMAAVPAGALELPRSSYVERAAVQEVADGLTALEDPRAPYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAKNSLLALLQGLAREMGAAPTDSPHAVPHVLDSLEQVQQHLAAVAPTGTSPRLVVLDDVWEREVVDAFAPLGFKVLLTTRDRSVVGVPAGRLELGDMTEEEAVELLRKTSGTV 738
            AL  L PPSLPDMAAVPAGALELP SSYVERAAVQEVADGLTA E+ RAPYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAK+SLLALLQGLAR++GAAPTD+P  VP VLDSLEQV+QHLAAV  TGTS RLVVLDDVWEREVVDAF PLGFKVLLTTRDRSVVGVPAGRLELGD+TEEEA+ELLRKTSG V
Sbjct:  230 ALPSLLPPSLPDMAAVPAGALELPSSSYVERAAVQEVADGLTAPEESRAPYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLARDVGAAPTDAPCGVPRVLDSLEQVRQHLAAVTSTGTSQRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGVPAGRLELGDVTEEEALELLRKTSGAV 432          
BLAST of mRNA_E-siliculosus-1a_F_contig14715.2762.1 vs. uniprot
Match: D7FUD7_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUD7_ECTSI)

HSP 1 Score: 339 bits (870), Expect = 3.190e-104
Identity = 184/237 (77.64%), Postives = 195/237 (82.28%), Query Frame = 1
Query:   28 KSIGEALDAIDRDVVRQFTAIAAKSAINAEAVKIALEELRPPSLPDMAAVPAGALELPRSSYVERAAVQEVADGLTALEDPRAPYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAKNSLLALLQGLAREMGAAPTDSPHAVPHVLDSLEQVQQHLAAVAPTGTSPRLVVLDDVWEREVVDAFAPLGFKVLLTTRDRSVVGVPAGRLELGDMTEEEAVELLRKTSGTV 738
            K + + L  I  DV R   AIAAK             ++ PPSLPDMA VP GALELP SSYVERAAVQEVADGLT  E+PR PYTVVG+GGGGKSVLASAVVR PSVREHFRGGI WVRVGRGAKNSLL LLQGLARE+GAAPTD+PH VPH LDSLEQVQQHLAAVA T  SPRLVVLDDVWEREVVDAF PLGFK+LLTTRDRS+V  PAGRLELGDMTEEEA+ELLRKTSGTV
Sbjct:    7 KKLEKKLQEIGGDVCRVVDAIAAKRIFT---------DILPPSLPDMAEVPVGALELPHSSYVERAAVQEVADGLTNPEEPRTPYTVVGIGGGGKSVLASAVVRMPSVREHFRGGISWVRVGRGAKNSLLPLLQGLAREVGAAPTDAPHGVPHALDSLEQVQQHLAAVASTRNSPRLVVLDDVWEREVVDAFVPLGFKLLLTTRDRSIVCDPAGRLELGDMTEEEALELLRKTSGTV 234          
BLAST of mRNA_E-siliculosus-1a_F_contig14715.2762.1 vs. uniprot
Match: D8LGG5_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGG5_ECTSI)

HSP 1 Score: 331 bits (848), Expect = 1.140e-100
Identity = 180/204 (88.24%), Postives = 186/204 (91.18%), Query Frame = 1
Query:  130 ALEELRPPSLPDMAAVPAGALELPRSSYVERAAVQEVADGLTALEDPRAPYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAKNSLLALLQGLAREMGAAPTDSPHAVPHVLDSLEQVQQHLAAV-APTGTSPRLVVLDDVWEREVVDAFAPLGFKVLLTTRDRSVVGVPAGRLELGDMTEEEAVELLRKTSGTV 738
            AL  LRPP L DMAAVPAGAL+LPR  YVERAAVQEVADGLTA E+PRAPYTVVG+GGGGKSVLASAVVRKPSVREHFRGGI WVRVGRGAKNSLL LLQGLAREMG APTD+PHAVP VLDSLEQVQQHLAAV A TGTSPRLVVLDDVWEREVVDA  PLGFKVLLTTRD SVV VPA RL+LGDMTEEEA+ELLRKTSGTV
Sbjct:  205 ALPSLRPPRLLDMAAVPAGALDLPRG-YVERAAVQEVADGLTAPEEPRAPYTVVGLGGGGKSVLASAVVRKPSVREHFRGGISWVRVGRGAKNSLLPLLQGLAREMGVAPTDAPHAVPQVLDSLEQVQQHLAAVVASTGTSPRLVVLDDVWEREVVDALVPLGFKVLLTTRDWSVVVVPARRLDLGDMTEEEALELLRKTSGTV 407          
BLAST of mRNA_E-siliculosus-1a_F_contig14715.2762.1 vs. uniprot
Match: A0A6H5KU94_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU94_9PHAE)

HSP 1 Score: 322 bits (825), Expect = 3.290e-99
Identity = 176/246 (71.54%), Postives = 194/246 (78.86%), Query Frame = 1
Query:    1 KRVNRGTQHKSIGEALDAIDRDVVRQFTAIAAKSAINAEAVKIALEELRPPSLPDMAAVPAGALELPRSSYVERAAVQEVADGLTALEDPRAPYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAKNSLLALLQGLAREMGAAPTDSPHAVPHVLDSLEQVQQHLAAVAPTGTSPRLVVLDDVWEREVVDAFAPLGFKVLLTTRDRSVVGVPAGRLELGDMTEEEAVELLRKTSGTV 738
            K + R ++HK + + L  ID DV R   AI+AK A            + PPSLPDMA VPA A+ L  S YVERAAV++VADG+T  E+PRAPYTV GMGGGGKSVLASAVVRK SVREHFRGGIFW+ VGRGAK  LL LLQGL  +MGAAPTD+PH VPHVLDSLEQVQ+HL AVA TGTSPRLVVLDDVWEREVVDA  PLGFKVL+TTRDRSVVGVP   LELGDMTEEEA+ELL KTSGTV
Sbjct:   90 KSITRCSRHKELEKQLQGIDGDVRRVLDAISAKGATGT---------VLPPSLPDMAKVPAEAVALSDSLYVERAAVRKVADGITNPEEPRAPYTVFGMGGGGKSVLASAVVRKSSVREHFRGGIFWLTVGRGAKKRLLPLLQGLTGDMGAAPTDTPHGVPHVLDSLEQVQRHLGAVASTGTSPRLVVLDDVWEREVVDALLPLGFKVLVTTRDRSVVGVPTRCLELGDMTEEEALELLLKTSGTV 326          
BLAST of mRNA_E-siliculosus-1a_F_contig14715.2762.1 vs. uniprot
Match: A0A6H5LJA6_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJA6_9PHAE)

HSP 1 Score: 293 bits (750), Expect = 3.980e-93
Identity = 155/191 (81.15%), Postives = 168/191 (87.96%), Query Frame = 1
Query:  166 MAAVPAGALELPRSSYVERAAVQEVADGLTALEDPRAPYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAKNSLLALLQGLAREMGAAPTDSPHAVPHVLDSLEQVQQHLAAVAPTGTSPRLVVLDDVWEREVVDAFAPLGFKVLLTTRDRSVVGVPAGRLELGDMTEEEAVELLRKTSGTV 738
            MAAVPAGAL LP+S YVERAAVQEVADGL   E+PRAPY VVGMGGGGK++L SAVVRK +VREHFRGG+FW+RVGR AKNSLL+LLQGLAREM AAPTD+PH VPHVL+SLEQV+QHLA VA  GTSPRLVVLDDVWEREVVDA   LG KVL+TTRDRSVVGV  G LELGDMTEEEA+ELL KTS TV
Sbjct:    1 MAAVPAGALTLPQS-YVERAAVQEVADGLIKPEEPRAPYAVVGMGGGGKTMLVSAVVRKSNVREHFRGGVFWMRVGRHAKNSLLSLLQGLAREMSAAPTDTPHGVPHVLESLEQVKQHLATVASAGTSPRLVVLDDVWEREVVDALLSLGLKVLVTTRDRSVVGVSGGLLELGDMTEEEALELLLKTSRTV 190          
BLAST of mRNA_E-siliculosus-1a_F_contig14715.2762.1 vs. uniprot
Match: D8LPV9_ECTSI (NB-ARC and TPR repeat-containig protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPV9_ECTSI)

HSP 1 Score: 275 bits (702), Expect = 1.140e-81
Identity = 172/342 (50.29%), Postives = 195/342 (57.02%), Query Frame = 1
Query:    1 KRVNRGTQHKSIGEALDAIDRDVVRQFTAIAAKSAINA----------------------------------------------------EAVKIALEELR--------------------------------------------PPSLPDMAAVPAGALELPRSSYVERAAVQEVADGLTALEDPRAPYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAKNSLLALLQGLAREMGAAPTDSPHAVPHVLDSLEQVQQHLAAVAPTGTSPRLVVLDDVWEREVVDAFAPLGFKVLLTTRDRSVVGVPAGRLELGDMTEEEAVELLRKTSGTV 738
            K+VNRGTQHKSI E LDAID++  + F  IA KS+I+                                                     E V + L++L+                                            PP+LP  AAVP GAL LPRS YVER  VQE    L   E   APY +VGMGGGGK+VLASA+VRK SV EHFRGGIFW+ +GRGA  SLL  LQGLAREMGAAPTD+PH VPHV DSLEQV QHLAAV   G+SPRLVVLDDVWEREVV AF  +G KVL+TTRDRS+VGVP G LELGDM E+EA+ELL KTSGTV
Sbjct:   86 KKVNRGTQHKSIEEDLDAIDKEARQLFGIIATKSSIDTRKTIKQILELQRGPNTVGTPVAIAGGVFAALLVAFAAVILSHRNEISHIDMGEVVGLVLQDLQLEGVRITFASHVSIVAVFGALLVVSSAVIWAQRKAFSTMIRDVLPPTLPQRAAVPTGALALPRS-YVERPGVQEAMGDLMDPEKALAPYMIVGMGGGGKTVLASALVRKSSVLEHFRGGIFWMEMGRGANKSLLHRLQGLAREMGAAPTDAPHGVPHVFDSLEQVMQHLAAVVSRGSSPRLVVLDDVWEREVVAAFLGVGLKVLVTTRDRSIVGVPGGLLELGDMAEDEALELLWKTSGTV 426          
BLAST of mRNA_E-siliculosus-1a_F_contig14715.2762.1 vs. uniprot
Match: A0A6H5KQU6_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQU6_9PHAE)

HSP 1 Score: 229 bits (583), Expect = 7.430e-67
Identity = 136/213 (63.85%), Postives = 153/213 (71.83%), Query Frame = 1
Query:  103 AINAEAVKIALEEL----RPPSLPDMAAVPAGALELPRSSYVERAAVQEVADGLTALEDPRAPYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAKNSLLALLQGLAREMGAAPTDSPHAVPHVLDSLEQVQQHLAAVAPTGTSPRLVVLDDVWEREVVDAFAPLGFKVLLTTRDRSVVGVPAGRLELGDMTEEEAVELLRKTS 729
            A N E V+  LEE+       SL + AAVPAGA  LP   YV R+ V++  +GL   E+P AP+ VVGM G GK+VL SAVVR   VREHF GGIFW+RVGRGAK SLL L+Q LAREMGA      H VP+VLD LEQV QH+AAVA TGTSPRLVVLDDVWEREVVDA   L  KVL+TTRD SVVGVP  RLE  DM E+EA+ELL KTS
Sbjct:   68 AANYEHVESKLEEIDREVARSSLSNRAAVPAGAHGLPHY-YVARSVVRKAVEGLINAEEPSAPFVVVGMSGAGKTVLVSAVVRHLRVREHFHGGIFWMRVGRGAKTSLLPLMQTLAREMGA------HGVPYVLDGLEQVGQHVAAVASTGTSPRLVVLDDVWEREVVDALLRLKLKVLVTTRDHSVVGVPGTRLEPEDMAEDEAMELLLKTS 273          
BLAST of mRNA_E-siliculosus-1a_F_contig14715.2762.1 vs. uniprot
Match: A0A6H5JLW6_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLW6_9PHAE)

HSP 1 Score: 202 bits (513), Expect = 9.290e-58
Identity = 107/148 (72.30%), Postives = 119/148 (80.41%), Query Frame = 1
Query:  295 MGGGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAKNSLLALLQGLAREMGAAPTDSPHAVPHVLDSLEQVQQHLAAVAPTGTSPRLVVLDDVWEREVVDAFAPLGFKVLLTTRDRSVVGVPAGRLELGDMTEEEAVELLRKTSGTV 738
            MGGGG++VL SAVVR+ SV E+FRGGIF + VGRGAKN LL LLQGLAREMGAAP  +PH  P  LDSLE V QHL  V  TGTSPRLVVLDDV EREVV+A  PLG K+++TTRDRSVVGVP G LE+GDMTEEEA+ELL   SG V
Sbjct:    1 MGGGGETVLVSAVVRELSVLEYFRGGIFLMSVGRGAKNRLLPLLQGLAREMGAAPAHAPHGNPGDLDSLEHVMQHLTTVVSTGTSPRLVVLDDVLEREVVEALLPLGLKLVVTTRDRSVVGVPGGCLEVGDMTEEEALELLMLASGAV 148          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig14715.2762.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KXS7_9PHAE7.760e-11390.15NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
D7G722_ECTSI2.890e-10889.66NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
D7G720_ECTSI4.090e-10589.16NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
D7FUD7_ECTSI3.190e-10477.64NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
D8LGG5_ECTSI1.140e-10088.24NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5KU94_9PHAE3.290e-9971.54NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5LJA6_9PHAE3.980e-9381.15NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
D8LPV9_ECTSI1.140e-8150.29NB-ARC and TPR repeat-containig protein n=1 Tax=Ec... [more]
A0A6H5KQU6_9PHAE7.430e-6763.85NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5JLW6_9PHAE9.290e-5872.30NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig14715contigE-siliculosus-1a_F_contig14715:20..759 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start0
Stop0
Cds size738
Model size742
Exons1
Hectar predicted targeting categoryother localisation
BRITEko00000,ko00001,ko03019,ko04812
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.C
EggNOG OGsCOG0457@1,KOG1840@2759,KOG4658@1,KOG4658@2759
EggNOG free text desc.determination of stomach left/right asymmetry
KEGG Pathwayko05132,map05132
KEGG koko:K10407
Seed eggNOG ortholog2880.D7G722
Seed ortholog evalue6.3e-94
Seed ortholog score350.5
Taxonomic scopeEukaryota
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927982.9701762-CDS-E-siliculosus-1a_F_contig14715:19..7571622927982.9701762-CDS-E-siliculosus-1a_F_contig14715:19..757Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig14715 20..757 +
1696318762.4835434-CDS-E-siliculosus-1a_F_contig14715:19..7571696318762.4835434-CDS-E-siliculosus-1a_F_contig14715:19..757Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig14715 20..757 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig14715.2762.1prot_E-siliculosus-1a_F_contig14715.2762.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig14715 20..757 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig14715.2762.1

>prot_E-siliculosus-1a_F_contig14715.2762.1 ID=prot_E-siliculosus-1a_F_contig14715.2762.1|Name=mRNA_E-siliculosus-1a_F_contig14715.2762.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=246bp
KRVNRGTQHKSIGEALDAIDRDVVRQFTAIAAKSAINAEAVKIALEELRP
PSLPDMAAVPAGALELPRSSYVERAAVQEVADGLTALEDPRAPYTVVGMG
GGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAKNSLLALLQGLAREMG
AAPTDSPHAVPHVLDSLEQVQQHLAAVAPTGTSPRLVVLDDVWEREVVDA
FAPLGFKVLLTTRDRSVVGVPAGRLELGDMTEEEAVELLRKTSGTV
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mRNA from alignment at E-siliculosus-1a_F_contig14715:20..759+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig14715.2762.1 ID=mRNA_E-siliculosus-1a_F_contig14715.2762.1|Name=mRNA_E-siliculosus-1a_F_contig14715.2762.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=740bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig14715:20..759+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
AAGAGGGTCAACAGAGGAACCCAGCACAAGTCGATCGGGGAGGCTTTGGA CGCCATCGACAGGGACGTCGTTCGGCAGTTTACCGCCATTGCCGCAAAAT CGGCTATCAACGCGGAGGCGGTGAAAATTGCTTTGGAAGAATTACGCCCT CCGAGCTTGCCGGACATGGCCGCGGTGCCCGCAGGAGCGCTCGAGTTGCC CCGCAGCAGCTACGTGGAGCGAGCTGCGGTACAGGAAGTTGCCGATGGCC TCACCGCCCTGGAGGATCCCCGTGCCCCCTACACCGTCGTCGGGATGGGA GGAGGGGGGAAGAGCGTGCTGGCCTCTGCTGTCGTTCGCAAGCCGAGCGT GAGGGAGCACTTCCGCGGCGGTATTTTCTGGGTGAGAGTTGGGAGGGGCG CGAAGAACAGCCTCCTGGCTCTCCTCCAGGGCCTGGCCAGGGAGATGGGC GCGGCGCCGACGGATTCTCCGCACGCGGTACCTCACGTCCTTGACAGCCT CGAGCAGGTGCAGCAGCATCTGGCTGCAGTCGCACCCACCGGCACCTCCC CTCGCCTGGTGGTGCTGGACGATGTGTGGGAACGCGAGGTCGTGGACGCG TTTGCTCCTCTGGGGTTTAAGGTGCTGCTGACCACGCGTGATCGGTCAGT TGTTGGTGTGCCGGCCGGACGCTTGGAGCTGGGAGACATGACGGAGGAAG AGGCGGTGGAGCTGCTCCGGAAGACAAGCGGGACTGTGGG
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig14715:20..759+

>mRNA_E-siliculosus-1a_F_contig14715.2762.1 ID=mRNA_E-siliculosus-1a_F_contig14715.2762.1|Name=mRNA_E-siliculosus-1a_F_contig14715.2762.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1476bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig14715:20..759+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
AAGAGGGTCAACAGAGGAACCCAGCACAAGTCGATCGGGGAGGCTTTGGA
CGCCATCGACAGGGACGTCGTTCGGCAGTTTACCGCCATTGCCGCAAAAT
CGGCTATCAACGCGGAGGCGGTGAAAATTGCTTTGGAAGAATTACGCCCT
CCGAGCTTGCCGGACATGGCCGCGGTGCCCGCAGGAGCGCTCGAGTTGCC
CCGCAGCAGCTACGTGGAGCGAGCTGCGGTACAGGAAGTTGCCGATGGCC
TCACCGCCCTGGAGGATCCCCGTGCCCCCTACACCGTCGTCGGGATGGGA
GGAGGGGGGAAGAGCGTGCTGGCCTCTGCTGTCGTTCGCAAGCCGAGCGT
GAGGGAGCACTTCCGCGGCGGTATTTTCTGGGTGAGAGTTGGGAGGGGCG
CGAAGAACAGCCTCCTGGCTCTCCTCCAGGGCCTGGCCAGGGAGATGGGC
GCGGCGCCGACGGATTCTCCGCACGCGGTACCTCACGTCCTTGACAGCCT
CGAGCAGGTGCAGCAGCATCTGGCTGCAGTCGCACCCACCGGCACCTCCC
CTCGCCTGGTGGTGCTGGACGATGTGTGGGAACGCGAGGTCGTGGACGCG
TTTGCTCCTCTGGGGTTTAAGGTGCTGCTGACCACGCGTGATCGGTCAGT
TGTTGGTGTGCCGGCCGGACGCTTGGAGCTGGGAGACATGACGGAGGAAG
AGGCGGTGGAGCTGCTCCGGAAGACAAGCGGGACTGTGAAGAGGGTCAAC
AGAGGAACCCAGCACAAGTCGATCGGGGAGGCTTTGGACGCCATCGACAG
GGACGTCGTTCGGCAGTTTACCGCCATTGCCGCAAAATCGGCTATCAACG
CGGAGGCGGTGAAAATTGCTTTGGAAGAATTACGCCCTCCGAGCTTGCCG
GACATGGCCGCGGTGCCCGCAGGAGCGCTCGAGTTGCCCCGCAGCAGCTA
CGTGGAGCGAGCTGCGGTACAGGAAGTTGCCGATGGCCTCACCGCCCTGG
AGGATCCCCGTGCCCCCTACACCGTCGTCGGGATGGGAGGAGGGGGGAAG
AGCGTGCTGGCCTCTGCTGTCGTTCGCAAGCCGAGCGTGAGGGAGCACTT
CCGCGGCGGTATTTTCTGGGTGAGAGTTGGGAGGGGCGCGAAGAACAGCC
TCCTGGCTCTCCTCCAGGGCCTGGCCAGGGAGATGGGCGCGGCGCCGACG
GATTCTCCGCACGCGGTACCTCACGTCCTTGACAGCCTCGAGCAGGTGCA
GCAGCATCTGGCTGCAGTCGCACCCACCGGCACCTCCCCTCGCCTGGTGG
TGCTGGACGATGTGTGGGAACGCGAGGTCGTGGACGCGTTTGCTCCTCTG
GGGTTTAAGGTGCTGCTGACCACGCGTGATCGGTCAGTTGTTGGTGTGCC
GGCCGGACGCTTGGAGCTGGGAGACATGACGGAGGAAGAGGCGGTGGAGC
TGCTCCGGAAGACAAGCGGGACTGTG
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