mRNA_E-siliculosus-1a_F_contig147.2750.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig147.2750.1
Unique NamemRNA_E-siliculosus-1a_F_contig147.2750.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig147.2750.1 vs. uniprot
Match: A0A6H5K6H5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6H5_9PHAE)

HSP 1 Score: 662 bits (1708), Expect = 1.450e-236
Identity = 379/429 (88.34%), Postives = 385/429 (89.74%), Query Frame = 2
Query:    5 ATHPKGRQEGAATGRGREHPQSHCFCYATEEAEEQRGTALASFMWPRRESSSRSGRETDFRPALALGTADSGSNXXXXXXXXX----------------STITAVEGEGPCGGGETLHTTVVSGNDELGGEAKSSPSIMELFDTNDVVAAAREQAAARDSTKXXXXXXXXXXXXXXA---SPAAAMARRHSLGRGRSKRYPTDSLRPSSGAWDHRNGLPAHKKAASFSGGVPRAGRGSGGSVGGAERHGYLSFSEVQVDEEDDTDDCLGHXXXXXXXXXXXKFGREMPHRRRKKRERAWKLFLAVMQEHGLRVRKYHRHGKGWAHRIVKYDPTLPGLRWKSSKWWDSGGGQIPLRDVLDVERRGKVVWVKCLHLGTIGFEASLETDAVVFYLAMDSLLDTRCGVSNDSSVGGTGGHEASGPRLPGIPAA 1234
            ATHPK RQ GAA G GR+HP++HCFCYATEEAEEQ GT LASFMWPRRES SRSGR TD RPALALGT DSG+ XXXXXXXXX                STITAVEGEGPCGGGETLHTTVVSGNDELGGEAKSSPSIMELFDTNDVVAAAREQAAAR    XXXXXXXXXXX   A   SPAAAMARRHSLG+GRSKR+PTDSLRPSSG WDHRNGLPAHKKAASFSGGVPRAGR SGGSVGGAERHGYLSFSEVQVDEEDDTDD LGHXXXXXXXXXXX FGREMPHRRRKKRERAWKLFLAVMQEHGLRVRKYHRHGKGWAHRIVKYDP LPGLRWKSSKWWDSGGGQIPLRDVLDVERRGKVVWVKCLHLGTIGFEASLETDAVVFYLAMDSLLDTRCGVS DSSVG TGGHEASGPRLPGIPAA
Sbjct:   35 ATHPKSRQAGAAAGSGRKHPKTHCFCYATEEAEEQGGTGLASFMWPRRESCSRSGRGTDCRPALALGTVDSGNXXXXXXXXXXXXXXXXXXXXXXXXXXSTITAVEGEGPCGGGETLHTTVVSGNDELGGEAKSSPSIMELFDTNDVVAAAREQAAARXXXXXXXXXXXXXXXTDGAPEASPAAAMARRHSLGQGRSKRFPTDSLRPSSGVWDHRNGLPAHKKAASFSGGVPRAGRESGGSVGGAERHGYLSFSEVQVDEEDDTDDRLGHXXXXXXXXXXXXFGREMPHRRRKKRERAWKLFLAVMQEHGLRVRKYHRHGKGWAHRIVKYDPNLPGLRWKSSKWWDSGGGQIPLRDVLDVERRGKVVWVKCLHLGTIGFEASLETDAVVFYLAMDSLLDTRCGVSYDSSVGATGGHEASGPRLPGIPAA 463          
BLAST of mRNA_E-siliculosus-1a_F_contig147.2750.1 vs. uniprot
Match: D7FS79_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS79_ECTSI)

HSP 1 Score: 398 bits (1023), Expect = 5.800e-136
Identity = 225/288 (78.12%), Postives = 226/288 (78.47%), Query Frame = 2
Query:  371 MELFDTNDVVAAAREQAAARDSTKXXXXXXXXXXXXXXASPAAAMARRHSLGRGRSKRYPTDSLRPSSGAWDHRNGLPAHKKAASFSGGVPRAGRGSGGSVGGAERHGYLSFSEVQVDEEDDTDDCLGHXXXXXXXXXXXKFGREMPHRRRKKRERAWKLFLAVMQEHGLRVRKYHRHGKGWAHRIVKYDPTLPGLRWKSSKWWDSGGGQIPLRDVLDVERRGKVVWVKCLHLGTIGFEASLETDAVVFYLAMDSLLDTRCGVSNDSSVGGTGGHEASGPRLPGIPAA 1234
            MELFDTNDVVAAAREQ        XXXXXXXXXXXXX ASPAAAMARRHSLGRGRSKRY TDSLRPSSGAWDHRNGLPAHKKAASFSGGVPRAGRGSGGSVGGAERHGYLSFSEVQ                                                  EHGLRVRKYHRHGKGWAHRIVKYDPTLPGLRWKSSKWWDSGGGQIPLRDVLDVERRGKVVWVKCLHLGTIGFEASLETDAVVFYLAMDSLLDTRCGVSN+SSVGGTGGH ASGPRL GIPAA
Sbjct:    1 MELFDTNDVVAAAREQXXXXXXXXXXXXXXXXXXXXXEASPAAAMARRHSLGRGRSKRYSTDSLRPSSGAWDHRNGLPAHKKAASFSGGVPRAGRGSGGSVGGAERHGYLSFSEVQ--------------------------------------------------EHGLRVRKYHRHGKGWAHRIVKYDPTLPGLRWKSSKWWDSGGGQIPLRDVLDVERRGKVVWVKCLHLGTIGFEASLETDAVVFYLAMDSLLDTRCGVSNNSSVGGTGGHGASGPRLSGIPAA 238          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig147.2750.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K6H5_9PHAE1.450e-23688.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FS79_ECTSI5.800e-13678.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig147contigE-siliculosus-1a_F_contig147:37902..44137 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size1104
Model size1285
Exons4
Ec32 orthologEc-01_000860.1
Ec32 ortholog descriptionexpressed unknown protein
Hectar predicted targeting categoryother localisation
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig147.2750.1prot_E-siliculosus-1a_F_contig147.2750.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig147 37950..44004 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927980.707284-UTR-E-siliculosus-1a_F_contig147:37901..379491622927980.707284-UTR-E-siliculosus-1a_F_contig147:37901..37949Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig147 37902..37949 -
1696318761.4569838-UTR-E-siliculosus-1a_F_contig147:37901..379491696318761.4569838-UTR-E-siliculosus-1a_F_contig147:37901..37949Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig147 37902..37949 -
1622927980.7906163-UTR-E-siliculosus-1a_F_contig147:44004..441371622927980.7906163-UTR-E-siliculosus-1a_F_contig147:44004..44137Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig147 44005..44137 -
1696318761.5188913-UTR-E-siliculosus-1a_F_contig147:44004..441371696318761.5188913-UTR-E-siliculosus-1a_F_contig147:44004..44137Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig147 44005..44137 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927980.7319024-CDS-E-siliculosus-1a_F_contig147:37949..381861622927980.7319024-CDS-E-siliculosus-1a_F_contig147:37949..38186Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig147 37950..38186 -
1696318761.4671474-CDS-E-siliculosus-1a_F_contig147:37949..381861696318761.4671474-CDS-E-siliculosus-1a_F_contig147:37949..38186Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig147 37950..38186 -
1622927980.7441542-CDS-E-siliculosus-1a_F_contig147:38506..387881622927980.7441542-CDS-E-siliculosus-1a_F_contig147:38506..38788Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig147 38507..38788 -
1696318761.484748-CDS-E-siliculosus-1a_F_contig147:38506..387881696318761.484748-CDS-E-siliculosus-1a_F_contig147:38506..38788Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig147 38507..38788 -
1622927980.7585795-CDS-E-siliculosus-1a_F_contig147:39181..397371622927980.7585795-CDS-E-siliculosus-1a_F_contig147:39181..39737Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig147 39182..39737 -
1696318761.5009663-CDS-E-siliculosus-1a_F_contig147:39181..397371696318761.5009663-CDS-E-siliculosus-1a_F_contig147:39181..39737Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig147 39182..39737 -
1622927980.7729461-CDS-E-siliculosus-1a_F_contig147:43975..440041622927980.7729461-CDS-E-siliculosus-1a_F_contig147:43975..44004Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig147 43976..44004 -
1696318761.5100439-CDS-E-siliculosus-1a_F_contig147:43975..440041696318761.5100439-CDS-E-siliculosus-1a_F_contig147:43975..44004Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig147 43976..44004 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig147.2750.1

>prot_E-siliculosus-1a_F_contig147.2750.1 ID=prot_E-siliculosus-1a_F_contig147.2750.1|Name=mRNA_E-siliculosus-1a_F_contig147.2750.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=368bp
MWPRRESSSRSGRETDFRPALALGTADSGSNNNNNSSNKKSTITAVEGEG
PCGGGETLHTTVVSGNDELGGEAKSSPSIMELFDTNDVVAAAREQAAARD
STKTATAAAAAADGAAEASPAAAMARRHSLGRGRSKRYPTDSLRPSSGAW
DHRNGLPAHKKAASFSGGVPRAGRGSGGSVGGAERHGYLSFSEVQVDEED
DTDDCLGHNSSSTASSSSSKFGREMPHRRRKKRERAWKLFLAVMQEHGLR
VRKYHRHGKGWAHRIVKYDPTLPGLRWKSSKWWDSGGGQIPLRDVLDVER
RGKVVWVKCLHLGTIGFEASLETDAVVFYLAMDSLLDTRCGVSNDSSVGG
TGGHEASGPRLPGIPAA*
back to top

mRNA from alignment at E-siliculosus-1a_F_contig147:37902..44137-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig147.2750.1 ID=mRNA_E-siliculosus-1a_F_contig147.2750.1|Name=mRNA_E-siliculosus-1a_F_contig147.2750.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=6236bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig147:37902..44137- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ACCAGCAACACACCCCAAAGGCAGGCAGGAAGGGGCAGCCACAGGAAGAG GGAGAGAGCACCCGCAGAGCCATTGTTTTTGCTATGCAACGGAGGAGGCG GAGGAACAGAGAGGAACCGCTCTAGCTAGCTTCATGTGGCCCCGACGTGA AAGCAGCAGCAGGTTTGTCGACACCAGTCCGTCAGTCACCACGATGAGCA ATCAAACAACTTCGTTCGTTACGGCAACAGATGCTAGGAAAGAGAGCGAG TTTTGCATCTTGCATCTTGAATATTGAATATTTCCACACGGAGTTGTTGT TTCCCCGGCCCGTCTTGCGGAATTTATGCCCCTAAGCCTGTGTCAGTGCG TATCGCTTGTGAGCCGTGTAGCGGGTGTTCCGGGCGGGGGGGGGGAGGCG AAAAACGGACAAAAAAATCCTCATTCATGCCCGCTGGGCGGACAAGAAAC GCAAAGAACGAGCGTGTGTCGCCCTCGGCGCAGCGATCTCAACAGCCCGT TCACCGTTCAGGCGCACACACATACGCACGTCAAACATTGTAGCGCGTGT GTGCGTTAGTGCCTCTCCGTCGTGGCGTTCCTCCTTGGTGGCTTGTGCTA TTTCCTGTGTTGCGTCTTTAGCTGTCCGCGCGTCTTCTCAAGGAACATAT TAGTCTGTGTTGTGGATGGATGACCTCACCCGCTGCGCTGCTGTTGCGGG TTTATTCGCGCAAAAACAGCTGATGCCGCAAAACACAGCTTACATGAAAG ATCCCTGCAGCCTCCAGTGCTCAACAATTTCTTTTTTTTCGGTGCACGTA CAACGCGCAATAGCACAACTACGACGGTAGTATTGTAGCAGCTCTCGTTA ACTTTTCCCACAGCAGTAATCGTGTTCCCACAGGATCGATTCAAATGGCT TTACTTTACTATAGAAGCCCTTCCAATGTGTTCAAATGTGCCGAATTAAA ACTTGGCTGACGGAAGAAGCTCCTGTTGTTGTGGGTTTCAAATCTCGCTC TCGTTACCTCTTACGAAATGTACCGTGGTATGCATTTGCACCCCGTATGA TGAAATAACAGCAATGCGGCGGCAACAACAGCAGAGCGGGATTTCCGTTT TTTGGAATCTTGACTTCTGCTTGTTGTAACTAAATGCTTCAGTTTCGAAG ACCTCCCGTAAAGGGGATATACCTTGAGTGGGGCTACTTGTTCGAAGATA TACTACAGCAGCAGTCGATGGTTCAGGTTTCATACATGAGCATCTTTTTT CCGAGGTGCACCTACCTCATGGCGGGCGGCGAAATCGTGACATATATCGT CATCGCAATGGCGGACGACGGCAAATCAATAGCCCAAGACACCGCATCAT GCTCTCCCCCTGCACAGACTGATCAATGAACCCTTCGGCTCTTTATTTTT GCTGCAAGCCAGTTCGCGTGCTAGCTGAAACGTATGACACCACCACCACT AACTACCACCACCGCACATCATCTCCTTCTTGCCTCGCCTCTTCAAAAAC ATTTGACACCAGCAGGTAGGTGTTGTATCGTAGCGTCATTGACATCATCG GTATCATGTACACCGAATTGCCCAACAAGCGAGCAGCAGGCGGTGGGTAC ACATTTTAGGAACATCGTACACGTACATCCCTGGGGGAAATCCGCTTCTT CTCGTCTTAAGAGGGAGTTTGTCCGATACCGCGATACCGTTACACAAGGT GGCAAGATGACCACCAAACTCTCTTGTTGAGCGTACAGGCGAGATATTGC TGTACCCTACAACTAGGGGAGACACACAGGCAAAGTCTCCGCTAACAAAG ATATATATGATGAATATGTGCGTATTTCGTTGCTATTGCATCCCAGACTT TTATCTGTGGAAGAAAAAGATGAATATTTCTTGTGTTTTTGGAAAAGAAC GAAGCATATTTTCGGAAATTGAACGGCACAGAGGGAATAGAAGGCACCGG ACACTTTTGGTTTCTTGCCGGGGTGATCGCGATGCGGCTATTAGGAGAAA CAAATATCCACACAGAAAGACTACCCGATGCGGCTATCTCGACGTATTTT GACTACTACAAGTAGTTGCGTGGACCCGTAACACAAGTTGCACCAAAAAC ATGCCCTGTTGTATCCATAATAGACTCGTGGTACATAGGTTTCGGCAAAA ACTAGTGGTATCTACCATGTGCATGCATACAAGGCATGCAATTCTTCCCT GTTCTGCGCAACGACAATGCAATGCAGAAGGCTTGACTTGCGTACCTTCA ACAAGCAAGCACCCAGGAGTAGGTACGAATGGTTGCTTCGTTGGTTGTGC AGCAGATACCATGGTATCAAGGAAGATAAACCAGAACGAATACTTGTATC CTATGTATCTCCCCTGTGGTGGCACGGCGTCTAAAATCATCCGCGGAGCA CGCGGAGAATGCTGGATTTGCTTCTTTCTTGTTTCCTTGGGCAGTGCGTC GCCTCCTTGGTCTCTCAAACCAACACGAGAGTGCTCGTCCTCGCCTTCTA CTATTTAAATGGATGACGCTCACTGCTGCTGTACTAACACCCAGAGTACA TTTACATACGTACACAGCACACGGTGCTAGTGTACAAGACCTTAAGACCC AAGAACCCTCATGTTTCGGCGGAGGCTGGGTTCCTGGGGTCTGGGGTCAT GCTATGCATCTGTAGCATACGAATGATCGTTATATTGGTTTTTGTCTAGG GGTTGTTAACCGAGCTCACAAATGGTGCAAAGTTCTTAATTTTTCTAGTA TTTTATTTTTTGGGAGCTCAATTTTCTTTTTAACTCCTGGCTTCCTTTTG TAGTGCGGTCGCGTTCTGTAGGGTAAGTTGTGCTTTTCCCGTGCGCACTG AATTGGTGTGCAAAGTCGGCACTGCTGCTACAAGTATAGAGCCTTGGGTG GTGATGCAAGAACGGACCGACGAAATCCATCCAAGAAAAACACAATTTGC ACAACGATCCATTTTTTTTTTTCCGAGTATACCTAGGGCTTCACGATCGA CGAGGGAAAGGGATGGCTGAAACCATCTCGCGATAAAAACTAAGGGAAGC ACCGCAGGGGGAAAGGTGAAGCAAGAAAACAAACAAAATGAGAAACGCTC CGTGACCTTCCTCTCGTGTTGTGTGACCCCGGCCAGTCAGGTTATATGTA CGCCGAAAGGCCTGTATACCCGCGCCAGAATAGATGCGACGGACACACAC ACACGCACATCCCTGTGACCACGGGAATCGCTCGGGCAAGTGCTTGATCA GTACGGACAGACGAAGGTAGTGGGTAGAGAGATTGGCACGGTTTTTAATG TGAAGACAACAACAACAATCCGTCCGTTATGATAGCCTACTTTTTGCTGT AATAGCACCCGTTCCTCCGCTGTCGGCATCGATCTTTTGGCACTCCGGCG CACCCAACCGGGGGTGGGGAACGCAAGCATACTGTAGGGTATTGTACGGG CGGGATAAATCATTCCGCGTGTGGAGATGGTGCAAGTAAATACCCTGCCT GTGAGGTACTTTATGAAGAATGGATATGGAGGTCTACACGGCAGCTCTTG GCCGTTTTGAAGCAGCGTGCTGCCTTTTCTTTTTGGGAGAAAATCTGACT CTCTCTCCGATCTTCAGCAAAAGCCTGCTAAATAGCACCGCCGCACTTGC GTGTGCCCGTCGTACGGAAAATACCATCAAAGGCCGTCGGGTTGGAACAT GCAGAGGTATCATACAGTCTGCTGTTATTTTGTTCTTGATAAGACACCAC CGTGACGGAGATTACTTTTCAGGAAAACAATGCCGACCCATTTCTTCCGC AAGAAATAAACACCCCTCGAAATATTTTGTTATGATTCAGCTGAAGTTTG GCTACGATACCGTTAGTTAGAGGTATCCTCTTTGCGATGGCAAAAAAGGA AGAAGTCCCTGCGTAGTACTACTATAGTGGAAGCGTACACCAGCCTGCCG GGCGTCTTCCACGCCTGTTGTAGTTTTGTGGACGGACAGCCGTTCGAGTG CACAGACGAAGCCATGCCATAAGAGCATGAACGAGAGAAAGAGAACCACA AATTCACTCAAAATTGTTGCGTGTTTCACTCCACTGGTTGGCGTCTGCGT ACCCCCCTCGCGGAATCGTACGTTGGCAGAGTGGGCAGCAGGGGGGCAGG GGATACGCAGAAGTAACATCCACGCCAGCTTGTTTCCCGAGAGAGACAGA GACAGAGAGCGGTGCATGCAAGCATCATAGTAGTCTTGATGTGGACCCGG ACACTCCAACCTCTTGCCTGTAGTCGCACCCATTCTGTCTCATATCTTTG TATGTGGTAGGAGTTGTTTTCTTCCGAAAGCGAAACTGCGTTCACCTCTT AGGCTGCTGTCCCCGCCCCACCTGCTACCAATAAATATTGCCGTTTTCAG GAGCGGAAGAGAGACCGACTTTCGCCCAGCGCTGGCACTTGGAACAGCCG ACAGCGGCAGCAACAACAACAATAACAGCAGCAACAAGAAGTCAACCATA ACGGCGGTGGAAGGAGAGGGGCCCTGCGGAGGGGGAGAGACCCTGCACAC TACGGTGGTCTCGGGCAACGACGAGCTTGGAGGAGAGGCCAAGAGCTCCC CTTCCATCATGGAGCTCTTCGACACCAACGACGTCGTCGCCGCCGCGAGA GAGCAGGCCGCGGCGCGCGACAGCACCAAGACCGCTACCGCCGCCGCCGC GGCGGCCGACGGTGCTGCCGAGGCGTCGCCGGCGGCGGCGATGGCGAGGC GCCACAGCTTAGGCCGCGGCAGGAGCAAAAGGTATCCCACGGATTCACTG AGGCCGTCGTCGGGGGCGTGGGACCACCGGAACGGATTGCCCGCCCACAA GAAGGCGGCGTCGTTCTCTGGGGGGGTCCCCCGCGCGGGGAGGGGTTCCG GGGGCTCCGTGGGGGGCGCGGAACGGCATGGGTACCTCAGCTTTTCGGAG GTGCAGGTGAGGCGAATGGGAGGGTTGGGTGGCCGGGGGGTTGAGCGCAA GACGGCGAAGCTAGCATACAACGGGGACCCCATATCTCGTCCATTGGCGC TACGTTCCCGCATCCAGACCGCGAAGCGCCATCCCCAAACGCCCAGACAC CCTTCCTTGCACTTCCCGTATTAATTACATTCTACTTCGAAGTAATACAT TTGTTTTTAAGTCGTAGTCGCTTGTTCGTGGTCGGGTGCAGTTGTTGCTT CTGTTTTTTTTATTATCACTGTATTAGTTTTTTTTATATTAGGTGTTTCC GTCTAGCTGAACTAAGTATGTACTTTTCTTTTCTCAAGTCATGTCGTTGT CGCTTGTTCGCGGTCGGGTGCTGATACTTTCGGGGGGTTTTTAAATTAGG TCGACGAGGAAGACGACACCGATGATTGCCTCGGCCACAACAGTAGCAGC ACCGCGAGCAGCAGCAGCAGCAAGTTTGGGCGGGAGATGCCGCACCGAAG GCGCAAGAAGCGGGAACGCGCGTGGAAGCTTTTCTTGGCGGTCATGCAGG AGCACGGGCTGAGGGTCCGGAAGTACCATCGCCACGGGAAAGGGTGGGCG CACCGTATAGTCAAGTACGACCCGACCCTGCCGGGCCTGCGATGGAAGAG CAGCAAGTGGTGGGACTCTGGCGGGGGGCAGGTGCGGTATCTGTCTATCA ATCCTGTTGTCGTCTGGTACCTCCTGCAGCTGCTTTGTTGCTGCCTGCGG TTGGTTGTGTGGGTGATGATGAACTGTCAAAGCACGGAATCTTCCACCCG CCCGTGTCCCGCTCCAAGTATTTTTTTACCGTACTTCTGCATGCGGATGT ATCATACCGTCCTGAAGTCATTTTATTTCACGACCTCACAAAAGACGCGC CTTCCTGCATCCAACCAAGCCACTCTACCCCCCTAGTCCTCCTCGACCCG TCCAACTCTCTGAGCATACCCAACCATTGTTTCCCCCGCGATGAAAAACA GATACCGCTGCGGGATGTTTTGGACGTGGAGCGGAGGGGCAAGGTAGTGT GGGTCAAGTGCTTGCACCTCGGCACCATCGGCTTCGAGGCATCCCTTGAG ACGGACGCGGTAGTCTTTTACCTGGCCATGGACTCGTTGCTCGACACCCG CTGCGGGGTCTCAAACGACAGCAGCGTCGGCGGTACCGGAGGCCACGAGG CGTCAGGCCCTCGCCTTCCGGGAATTCCGGCGGCGTAACGCCGTGATTTC TCTGGGTGGGTGGGGGGGGGGGTGAGCCCTGTCCTC
back to top

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig147:37902..44137-

>mRNA_E-siliculosus-1a_F_contig147.2750.1 ID=mRNA_E-siliculosus-1a_F_contig147.2750.1|Name=mRNA_E-siliculosus-1a_F_contig147.2750.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2208bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig147:37902..44137- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGTGGCCCCGACGTGAAAGCAGCAGCAGATGTGGCCCCGACGTGAAAGC
AGCAGCAGGAGCGGAAGAGAGACCGACTTTCGCCCAGCGCTGGCACTTGG
AACAGCCGACAGCGGCAGCAACAACAACAATAACAGCAGCAACAAGAAGT
CAACCATAACGGCGGTGGAAGGAGAGGGGCCCTGCGGAGGGGGAGAGACC
CTGCACACTACGGTGGTCTCGGGCAACGACGAGCTTGGAGGAGAGGCCAA
GAGCTCCCCTTCCATCATGGAGCTCTTCGACACCAACGACGTCGTCGCCG
CCGCGAGAGAGCAGGCCGCGGCGCGCGACAGCACCAAGACCGCTACCGCC
GCCGCCGCGGCGGCCGACGGTGCTGCCGAGGCGTCGCCGGCGGCGGCGAT
GGCGAGGCGCCACAGCTTAGGCCGCGGCAGGAGCAAAAGGTATCCCACGG
ATTCACTGAGGCCGTCGTCGGGGGCGTGGGACCACCGGAACGGATTGCCC
GCCCACAAGAAGGCGGCGTCGTTCTCTGGGGGGGTCCCCCGCGCGGGGAG
GGGTTCCGGGGGCTCCGTGGGGGGCGCGGAACGGCATGGGTACCTCAGCT
TTTCGGAGGTGCAGGAGCGGAAGAGAGACCGACTTTCGCCCAGCGCTGGC
ACTTGGAACAGCCGACAGCGGCAGCAACAACAACAATAACAGCAGCAACA
AGAAGTCAACCATAACGGCGGTGGAAGGAGAGGGGCCCTGCGGAGGGGGA
GAGACCCTGCACACTACGGTGGTCTCGGGCAACGACGAGCTTGGAGGAGA
GGCCAAGAGCTCCCCTTCCATCATGGAGCTCTTCGACACCAACGACGTCG
TCGCCGCCGCGAGAGAGCAGGCCGCGGCGCGCGACAGCACCAAGACCGCT
ACCGCCGCCGCCGCGGCGGCCGACGGTGCTGCCGAGGCGTCGCCGGCGGC
GGCGATGGCGAGGCGCCACAGCTTAGGCCGCGGCAGGAGCAAAAGGTATC
CCACGGATTCACTGAGGCCGTCGTCGGGGGCGTGGGACCACCGGAACGGA
TTGCCCGCCCACAAGAAGGCGGCGTCGTTCTCTGGGGGGGTCCCCCGCGC
GGGGAGGGGTTCCGGGGGCTCCGTGGGGGGCGCGGAACGGCATGGGTACC
TCAGCTTTTCGGAGGTGCAGGTCGACGAGGAAGACGACACCGATGATTGC
CTCGGCCACAACAGTAGCAGCACCGCGAGCAGCAGCAGCAGCAAGTTTGG
GCGGGAGATGCCGCACCGAAGGCGCAAGAAGCGGGAACGCGCGTGGAAGC
TTTTCTTGGCGGTCATGCAGGAGCACGGGCTGAGGGTCCGGAAGTACCAT
CGCCACGGGAAAGGGTGGGCGCACCGTATAGTCAAGTACGACCCGACCCT
GCCGGGCCTGCGATGGAAGAGCAGCAAGTGGTGGGACTCTGGCGGGGGGC
AGGTCGACGAGGAAGACGACACCGATGATTGCCTCGGCCACAACAGTAGC
AGCACCGCGAGCAGCAGCAGCAGCAAGTTTGGGCGGGAGATGCCGCACCG
AAGGCGCAAGAAGCGGGAACGCGCGTGGAAGCTTTTCTTGGCGGTCATGC
AGGAGCACGGGCTGAGGGTCCGGAAGTACCATCGCCACGGGAAAGGGTGG
GCGCACCGTATAGTCAAGTACGACCCGACCCTGCCGGGCCTGCGATGGAA
GAGCAGCAAGTGGTGGGACTCTGGCGGGGGGCAGATACCGCTGCGGGATG
TTTTGGACGTGGAGCGGAGGGGCAAGGTAGTGTGGGTCAAGTGCTTGCAC
CTCGGCACCATCGGCTTCGAGGCATCCCTTGAGACGGACGCGGTAGTCTT
TTACCTGGCCATGGACTCGTTGCTCGACACCCGCTGCGGGGTCTCAAACG
ACAGCAGCGTCGGCGGTACCGGAGGCCACGAGGCGTCAGGCCCTCGCCTT
CCGGGAATTCCGGCGGCGTAAATACCGCTGCGGGATGTTTTGGACGTGGA
GCGGAGGGGCAAGGTAGTGTGGGTCAAGTGCTTGCACCTCGGCACCATCG
GCTTCGAGGCATCCCTTGAGACGGACGCGGTAGTCTTTTACCTGGCCATG
GACTCGTTGCTCGACACCCGCTGCGGGGTCTCAAACGACAGCAGCGTCGG
CGGTACCGGAGGCCACGAGGCGTCAGGCCCTCGCCTTCCGGGAATTCCGG
CGGCGTAA
back to top