mRNA_E-siliculosus-1a_F_contig1466.2733.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1466.2733.1
Unique NamemRNA_E-siliculosus-1a_F_contig1466.2733.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1466.2733.1 vs. uniprot
Match: D8LEZ5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEZ5_ECTSI)

HSP 1 Score: 573 bits (1478), Expect = 5.470e-205
Identity = 292/298 (97.99%), Postives = 294/298 (98.66%), Query Frame = 1
Query:  247 MTTAAEVDKVPVAAAKDVISSIFGSAACVYTGQPLDTIKVRMQARPDAFSGTFQCLRRTLAEESITSLWKGSTPALGGAVLENMVAFGVNEQLKRVFPDKDGSSAPWWQPILFGGVTGVFTTVVVCPSDVIKSKVQVGRSMRKGVAVSAGTAAEGLPVLNATRMTAHILRTQGVRGLFVGLGAQFARDVPFYAAFFGTYETVVDRGKALPYEITPEVLYFLAGGMAGVVGWAAVMPLDSVKSIIQTTDKPESLLRTLQMVVRTKGWRALFIGLNAALARAFPANAALFLGYEIVRRAL 1140
            MTTAAEVDKVPVAAAKDVISSIFGSAACVYTGQPLDTIKVRMQARPDAFSGTFQCLRRTLAEESITSLWKGSTPALGGAVLENMVAFGVNEQLKRVFPDKDGSSAPWWQPILFGGVTGVFTTVVVCPSDVIKSKVQVGRSMRKGVAVSA   A+GLPVLNATRMTAHILRTQGVRGLFVGLGAQFARDVPFYAAFFGTYETVVDRGKALPYEITPEVLYFLAGGMAGVVGWAAVMPLDSVKSIIQTTDKPESLLRTLQ VVRTKGW+ALFIGLNAALARAFPANAALFLGYEIVRRAL
Sbjct:    1 MTTAAEVDKVPVAAAKDVISSIFGSAACVYTGQPLDTIKVRMQARPDAFSGTFQCLRRTLAEESITSLWKGSTPALGGAVLENMVAFGVNEQLKRVFPDKDGSSAPWWQPILFGGVTGVFTTVVVCPSDVIKSKVQVGRSMRKGVAVSANAEAKGLPVLNATRMTAHILRTQGVRGLFVGLGAQFARDVPFYAAFFGTYETVVDRGKALPYEITPEVLYFLAGGMAGVVGWAAVMPLDSVKSIIQTTDKPESLLRTLQTVVRTKGWQALFIGLNAALARAFPANAALFLGYEIVRRAL 298          
BLAST of mRNA_E-siliculosus-1a_F_contig1466.2733.1 vs. uniprot
Match: A0A836CAY2_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAY2_9STRA)

HSP 1 Score: 265 bits (678), Expect = 7.740e-84
Identity = 143/283 (50.53%), Postives = 184/283 (65.02%), Query Frame = 1
Query:  295 DVISSIFGSAACVYTGQPLDTIKVRMQARPDAFSGTFQCLRRTLAEESITSLWKGSTPALGGAVLENMVAFGVNEQLKRVFPDKDGSSAPWWQPILFGGVTGVFTTVVVCPSDVIKSKVQVGRSMRKGVAVSAGTAAEGLPVLNATRMTAHILRTQGVRGLFVGLGAQFARDVPFYAAFFGTYETVVDRGKALPYEITPEVLYFLAGGMAGVVGWAAVMPLDSVKSIIQTTDK-PESLLRTLQMVVRTKGWRALFIGLNAALARAFPANAALFLGYEIVRRAL 1140
            +  +SIFGS AC+YTGQPLDTIKVR+QA P+AFSG  QCLR T+++E + SLWKG+TPAL GAV+EN+VAF +N++LK ++P  D  +A   QP+ +G VTG  T V +CP DVIK +VQV R          GTAA   P  NA  M   ++RT+G+RG + GL AQ ARD  F++ FFG Y+ +V++          EV Y  AGG+AGV GW   MP D +KS +Q T   P SL    + +V   G RALF G+     RAFPANAALFLGYE+ +R L
Sbjct:   10 EAAASIFGSFACIYTGQPLDTIKVRIQATPEAFSGAMQCLRTTISQEGVASLWKGATPALSGAVVENIVAFAINKELKLLWPPSDRHAAV--QPVAYGAVTGAVTAVALCPFDVIKCRVQVAR----------GTAARRAP--NAVEMAQLMVRTEGMRGFYRGLRAQVARDALFFSMFFGVYDVLVEQAMRRT-SFPREVAYIGAGGLAGVAGWLLSMPFDVLKSRMQVTPHGPRSLSAVARPLVAAGGPRALFAGVTVTCVRAFPANAALFLGYEVAKRNL 277          
BLAST of mRNA_E-siliculosus-1a_F_contig1466.2733.1 vs. uniprot
Match: A0A4D9CU68_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CU68_9STRA)

HSP 1 Score: 243 bits (619), Expect = 9.800e-75
Identity = 148/304 (48.68%), Postives = 178/304 (58.55%), Query Frame = 1
Query:  280 VAAAKDVISSIFGSAACVYTGQPLDTIKVRMQARPDAFSGTFQCLRRTLAEESITSLWKGSTPALGGAVLENMVAFGVNEQLKRVFPDKDG-----------SSAPWWQ-----PILFGGVTGVFTTVVVCPSDVIKSKVQVGRSMRKGVAVSAGTAAEGLPVLNATRMTAHILRTQGVRGLFVGLGAQFARDVPFYAAFFGTYETVVDRGKALPYEITP-EVLYFLAGGMAGVVGWAAVMPLDSVKSIIQTTDKPESLLRTLQMVVRTKGWRALFIGLNAALARAFPANAALFLGYEIVRRAL 1140
            V AAKDV+SSI GSA                                   EE + +LWKGS PAL GAV EN VAF VN+QLKR+  D +G           S A   +     P L GG TG+FT+  +CPSDVIK KVQV R+M K           G   ++A  M  H+L+TQGV+GLFVGLGAQFARD+PFYA FFGTYE  +   KA  Y   P E  Y +AGG+AGV GWAAVMP+D  KSIIQT+  P+SL+ T+  V +T+G  AL+ GL  A+ RAFPANAALFLGYE+ R  L
Sbjct:   36 VHAAKDVLSSIVGSAI----------------------------------EEGLRALWKGSVPALVGAVSENAVAFSVNQQLKRILADLEGYGLGNESNQESSKAEAKEESLVVPFLTGGFTGIFTSAALCPSDVIKCKVQVSRAMLK----------TGETAMDAQEMLVHVLKTQGVKGLFVGLGAQFARDIPFYAFFFGTYELSLVALKA--YTTMPQEGAYLVAGGLAGVAGWAAVMPIDMAKSIIQTSPNPKSLIPTMMDVAQTRGPMALYSGLGVAVFRAFPANAALFLGYELAREIL 293          
BLAST of mRNA_E-siliculosus-1a_F_contig1466.2733.1 vs. uniprot
Match: A0A7S2S5V7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S5V7_9STRA)

HSP 1 Score: 234 bits (597), Expect = 2.300e-71
Identity = 127/290 (43.79%), Postives = 175/290 (60.34%), Query Frame = 1
Query:  292 KDVISSIFGSAACVYTGQPLDTIKVRMQARPDAFSGTFQCLRRTLAEESITSLWKGSTPALGGAVLENMVAFGVNEQLKRVFP----DKDGSSAPWWQPILFGGVTGVFTTVVVCPSDVIKSKVQVGRSMRKGVAVSAGTAAEGLPVLNATRMTAHILRTQGVRGLFVGLGAQFARDVPFYAAFFGTYETVVDRGKALPYEITPEVLYFLAGGMAGVVGWAAVMPLDSVKSIIQTTDKPESLLR---TLQMVVRTKGWRALFIGLNAALARAFPANAALFLGYEIVRRAL 1140
            KDV +S+ G+ AC YTGQP DT+KVR+QARPD ++G  Q   +T   E + +LWKGS   + G ++EN  AFGVNEQLKRVFP    D DG +   +QP + G +TG   +  +CPS+++K++ Q+  +  K   + A T+ + L           + R QG+ GL+ G+ AQ ARD  FYA FFG+YE +V R       +  E  +F++GG+AG++GW  VMP+D  KSIIQ   +   +         V RT+G   LF G   AL R+FPANAALFLGYE+ RR L
Sbjct:   17 KDVAASVVGAVACCYTGQPFDTVKVRLQARPDEYTGMMQTFYKTAEAEGVAALWKGSVAVVTGMIMENAAAFGVNEQLKRVFPQSAQDLDGGAQGLFQPFMLGALTGSLVSFALCPSEIVKTRTQLEVANAKTSGLKAPTSMDILK---------KVWRLQGMAGLYTGIDAQIARDGLFYAVFFGSYEILV-RAFRKHTSLPDEANFFISGGLAGMLGWGFVMPVDVPKSIIQGDWRARPVGDFGGAFSEVFRTRGLSGLFSGSFPALVRSFPANAALFLGYELTRRGL 296          
BLAST of mRNA_E-siliculosus-1a_F_contig1466.2733.1 vs. uniprot
Match: A0A7S2URT5_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2URT5_9STRA)

HSP 1 Score: 216 bits (550), Expect = 2.110e-64
Identity = 123/290 (42.41%), Postives = 161/290 (55.52%), Query Frame = 1
Query:  292 KDVISSIFGSAACVYTGQPLDTIKVRMQARPDAFSGTFQCLRRTLAEESITSLWKGSTPALGGAVLENMVAFGVNEQLKRVFPD----KDGSSAP-WWQPILFGGVTGVFTTVVVCPSDVIKSKVQVGRSMRKGVAVSAGTAAEGLPVLNATRMTAHILRTQGVRGLFVGLGAQFARDVPFYAAFFGTYETVVDRGKALPYEITPEVLYFLAGGMAGVVGWAAVMPLDSVKSIIQT---TDKPESLLRTLQMVVRTKGWRALFIGLNAALARAFPANAALFLGYEIVRRA 1137
            +DV S+  GS  C YTGQPLDTIKVRMQ  P  ++G  Q   +T+ EE + +LWKG+ P   G  LEN VAFGVNE LKR FPD    K+    P   +P L G +TG  + +V+ PS+VIK+K QV            G++     +L        +++ QGVR LF G  AQ  RD PFYA FFG YE      +     +  E+ +FL+GG+AG+ GW   MP D  K+ +Q    T    S    +  + R +G   L+ GL   L RAFPANAALFLG E+ +RA
Sbjct:   12 RDVFSATLGSVCCCYTGQPLDTIKVRMQTNPHLYTGVIQTFSKTVGEEGVAALWKGAVPTAVGMALENAVAFGVNEALKRAFPDDPAAKNADERPDLLKPFLMGSITGCCSAIVLLPSEVIKAKTQV----------EIGSSLSSKDILQ------KMIKKQGVRSLFCGFDAQLMRDAPFYAVFFGGYELSCYLFRTHVPSMPEELNFFLSGGLAGMFGWTVAMPFDVPKTNVQARYDTKVFGSYFPEMIKIARERGVVGLYSGLGPTLVRAFPANAALFLGVEMGKRA 285          
BLAST of mRNA_E-siliculosus-1a_F_contig1466.2733.1 vs. uniprot
Match: A0A7S2L363_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2L363_9STRA)

HSP 1 Score: 213 bits (543), Expect = 2.570e-63
Identity = 121/288 (42.01%), Postives = 165/288 (57.29%), Query Frame = 1
Query:  292 KDVISSIFGSAACVYTGQPLDTIKVRMQARPDAFSGTFQCLRRTLAEESITSLWKGSTPALGGAVLENMVAFGVNEQLKRVFPDK---DGSSAP-WWQPILFGGVTGVFTTVVVCPSDVIKSKVQVGRSMRKGVAVSAGTAAEGLPVLNATRMTAHILRTQGVRGLFVGLGAQFARDVPFYAAFFGTYETVVDRGKALPYEITPEVLYFLAGGMAGVVGWAAVMPLDSVKSIIQTTDKPE---SLLRTLQMVVRTKGWRALFIGLNAALARAFPANAALFLGYEIVRR 1134
            +D+ S+  GS AC YTGQP DT+KVRMQ  P AF       +  ++ E I +LWKG+ P   G V EN +AFGVNE LKR FPD+   D +  P   +P L G +TG  +  V+ PS+V+K+K QV         V   T A    +         +++ QG+R LF+G  AQ  RD+PFYA FFGTYE      +     +  E+ +FL+GG AG++GWAA MP D  K+ +Q +   +   S    L  +VR +G  AL+ GL   +ARAFPANAALFLG E+ ++
Sbjct:   16 RDIFSASIGSVACCYTGQPFDTVKVRMQTSPAAFPSVLFTSKSIVSNEGIPALWKGAVPTALGMVAENAMAFGVNEALKRTFPDEAKSDPTKRPDLMRPFLMGAITGCCSATVLLPSEVVKAKTQV---------VVGNTGASSADIYK------KMMKRQGIRSLFIGFDAQIMRDMPFYAFFFGTYELNCYLFRTFVPSMPEELNFFLSGGFAGMLGWAAAMPFDVPKTNVQASWDSKVVGSYFPELIRIVRERGVLALYTGLIPTIARAFPANAALFLGVEMGKK 288          
BLAST of mRNA_E-siliculosus-1a_F_contig1466.2733.1 vs. uniprot
Match: B8C9S7_THAPS (Mitochondrial carrier (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C9S7_THAPS)

HSP 1 Score: 209 bits (532), Expect = 6.200e-62
Identity = 119/280 (42.50%), Postives = 157/280 (56.07%), Query Frame = 1
Query:  292 KDVISSIFGSAACVYTGQPLDTIKVRMQARPDAFSGTFQCLRRTLAEESITSLWKGSTPALGGAVLENMVAFGVNEQLKRVFPDKDGSSAPWWQPILFGGVTGVFTTVVVCPSDVIKSKVQVGRSMRKGVAVSAGTAAEGLPVLNATRMTAHILRTQGVRGLFVGLGAQFARDVPFYAAFFGTYETVVDRGKALPYEITPEVLYFLAGGMAGVVGWAAVMPLDSVKSIIQTTDKPE---SLLRTLQMVVRTKGWRALFIGLNAALARAFPANAALFLGYE 1122
            +D+ S+  GS AC YTGQP DT+KVRMQ  P  F       +  L  E + +LWKG+ P   G VLEN +AFGVNE LKR FPD      P  +P L G +TG  +  V+ PS+++K+K QV                 G    ++T +   ++R  G+R LFVG  AQ  RD PFYA FFGTYE      +     +  E+ YFL+GG AG++GW A MP D  K+ +Q + + +   S    L  +VR +G  AL+ GL   +ARAFPANAALFLG E
Sbjct:    4 RDIFSASIGSVACCYTGQPFDTVKVRMQTNPSLFPSVAFTTKSILKNEGMGALWKGAVPTAMGMVLENAMAFGVNEALKRTFPD-GSKEDPTQRPDL-GAITGCCSATVLLPSEIVKAKTQV---------------VVGNVSASSTEIYKKMIRQSGIRSLFVGFDAQIMRDAPFYAFFFGTYELNCYLFRTYVPSMPEELNYFLSGGFAGMLGWTAAMPFDVPKTNVQASWESKVVGSYFPELLRIVRERGVLALYTGLVPTIARAFPANAALFLGVE 266          
BLAST of mRNA_E-siliculosus-1a_F_contig1466.2733.1 vs. uniprot
Match: A0A7S1ZAT6_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZAT6_TRICV)

HSP 1 Score: 209 bits (531), Expect = 7.100e-61
Identity = 116/290 (40.00%), Postives = 166/290 (57.24%), Query Frame = 1
Query:  292 KDVISSIFGSAACVYTGQPLDTIKVRMQARPDAFSGTFQCLRRTLAEESITSLWKGSTPALGGAVLENMVAFGVNEQLKRVFPDKD-GSSAP-----WWQPILFGGVTGVFTTVVVCPSDVIKSKVQVGRSMRKGVAVSAGTAAEGLPVLNATRMTAHILRTQGVRGLFVGLGAQFARDVPFYAAFFGTYETVVDRGKALPYEITPEVLYFLAGGMAGVVGWAAVMPLDSVKSIIQT---TDKPESLLRTLQMVVRTKGWRALFIGLNAALARAFPANAALFLGYEIVRR 1134
            +D+ S+  GS  C YTGQP DT+KVRMQ  PD + G +Q +++T A E + + WKG+ P   G  LEN +AFGVNE LKR FPD + G+  P       +P L G +TG  +  V+ PS+V+K+K QV     KG              +++  +   +++ QG++ +F G  AQ  RD PFYA FFG+Y+ +    K     +  E+ +F++GG AG++GW A MP D  K+ +Q+   T    S    L  + R +G   L+ GL   LARAFPANAALFLG E+ +R
Sbjct:   65 RDIFSATLGSVFCCYTGQPFDTVKVRMQTNPDIYGGIYQTIKKT-ASEGVPAFWKGAVPTAMGMALENAMAFGVNEALKRAFPDPNLGAMDPEKPPDLLRPFLMGTITGCCSACVLLPSEVVKAKTQVLVGTGKG--------------MSSNDVFKQMMKKQGIKSIFCGFEAQLMRDGPFYAFFFGSYDMLCYLFKIYVPSMPDELRFFMSGGFAGMLGWTAAMPFDVPKTNVQSRWDTKVVGSYFPELIKIGRERGILGLYNGLGPTLARAFPANAALFLGVEMGKR 339          
BLAST of mRNA_E-siliculosus-1a_F_contig1466.2733.1 vs. uniprot
Match: A0A7S4T4E9_9STRA (Hypothetical protein n=4 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A7S4T4E9_9STRA)

HSP 1 Score: 202 bits (513), Expect = 7.950e-59
Identity = 115/293 (39.25%), Postives = 160/293 (54.61%), Query Frame = 1
Query:  292 KDVISSIFGSAACVYTGQPLDTIKVRMQARPDAFSGTFQCLRRTLAEESITSLWKGSTPALGGAVLENMVAFGVNEQLKRVFPDK-----DGSSAP----WWQPILFGGVTGVFTTVVVCPSDVIKSKVQVGRSMRKGVAVSAGTAAEGLPVLNATRMTAHILRTQGVRGLFVGLGAQFARDVPFYAAFFGTYETVVDRGKALPYEITPEVLYFLAGGMAGVVGWAAVMPLDSVKSIIQT---TDKPESLLRTLQMVVRTKGWRALFIGLNAALARAFPANAALFLGYEIVRR 1134
            +D+ S+  GS  C YTGQP DT+KVRMQ  P+ +S  ++    T+ EE I + WKG+ P   G   EN +AFGVNE LKR FPD      D + A       +P L G +TG  + +V+ PS+V+K+K QV          + GT      +         ++R QG + LF GL AQ  RD PFYA FFG+YE      +     +  E+ YF++GG+AG++GW A MP D  K+ +Q+   T    S    +  + + +G   L+ GL   L RAFPANAALFLG E+ +R
Sbjct:   12 RDIFSATVGSIFCCYTGQPFDTVKVRMQTNPELYSSIYKTATTTMGEEGIKAFWKGAVPTAMGMAAENAMAFGVNEALKRAFPDPNKDQFDHNGAQRRPDLLRPFLMGAITGCCSALVLLPSEVVKAKTQV----------AVGTDVSSNDIFK------KMVRKQGYKSLFCGLDAQLMRDGPFYAFFFGSYEMSCFLFRTYVPSMPEELNYFISGGLAGMLGWTAAMPFDVPKTNVQSRYDTQIVGSYFPQMIQITKERGILGLYNGLGPTLVRAFPANAALFLGVEMGKR 288          
BLAST of mRNA_E-siliculosus-1a_F_contig1466.2733.1 vs. uniprot
Match: A0A7S2NZN3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NZN3_9STRA)

HSP 1 Score: 201 bits (511), Expect = 1.370e-58
Identity = 113/289 (39.10%), Postives = 162/289 (56.06%), Query Frame = 1
Query:  292 KDVISSIFGSAACVYTGQPLDTIKVRMQARPDAFSGTFQCLRRTLAEESITSLWKGSTPALGGAVLENMVAFGVNEQLKRVFPD----KDGSSAP-WWQPILFGGVTGVFTTVVVCPSDVIKSKVQVGRSMRKGVAVSAGTAAEGLPVLNATRMTAHILRTQGVRGLFVGLGAQFARDVPFYAAFFGTYETVVDRGKALPYEITPEVLYFLAGGMAGVVGWAAVMPLDSVKSIIQT---TDKPESLLRTLQMVVRTKGWRALFIGLNAALARAFPANAALFLGYEIVRR 1134
            +D+ S+  G+  C Y GQPLDT+KVRMQ  P  +SG        +  E  T+LWKG+ P   G   EN +AFGVNE LKR FP+    KD +  P   +P   G +TG  + +V+ PS+V+K+K+QV          + GT       ++A  +   +L+ QG++ +F GL +Q ARD  FYA FFG YE      +     +  E+ +F++GG+AG+ GWA  MP D  K+ +Q+   T    S L  +  +VR +G   L+ GL   L RAFPANAALFLG E+ ++
Sbjct:   12 RDIFSATIGAITCAYVGQPLDTVKVRMQTMPKVYSGIGTSFAHIVRNEGATALWKGAVPTTLGMTAENAMAFGVNEALKRAFPEDKSSKDVNGPPNMIRPFQMGAITGCCSALVLLPSEVVKAKIQV----------AVGT-------VSARDIMKQMLKEQGIKSMFCGLDSQLARDASFYAVFFGGYELSCYLFRTYVPSMPEELNFFISGGLAGMFGWACAMPFDVPKTNVQSRYDTKVVGSYLPEMGRIVRKRGILGLYDGLGPVLIRAFPANAALFLGVEMGKK 283          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1466.2733.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEZ5_ECTSI5.470e-20597.99Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CAY2_9STRA7.740e-8450.53Mitochondrial carrier domain-containing protein n=... [more]
A0A4D9CU68_9STRA9.800e-7548.68Uncharacterized protein n=3 Tax=Monodopsidaceae Ta... [more]
A0A7S2S5V7_9STRA2.300e-7143.79Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2URT5_9STRA2.110e-6442.41Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S2L363_9STRA2.570e-6342.01Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
B8C9S7_THAPS6.200e-6242.50Mitochondrial carrier (Fragment) n=1 Tax=Thalassio... [more]
A0A7S1ZAT6_TRICV7.100e-6140.00Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S4T4E9_9STRA7.950e-5939.25Hypothetical protein n=4 Tax=Lithodesmiaceae TaxID... [more]
A0A7S2NZN3_9STRA1.370e-5839.10Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1466contigE-siliculosus-1a_F_contig1466:23980..25809 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size897
Model size1143
Exons2
Ec32 orthologEc-21_006130.3
Ec32 ortholog descriptionconserved unknown protein
Hectar predicted targeting categoryother localisation
BRITEko00000,ko00001,ko00002,ko01000,ko02000
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.U
EC2.3.1.199
EggNOG OGsKOG0758@1,KOG0758@2759
EggNOG free text desc.mitochondrial transport
GOsGO:0003333,GO:0003674,GO:0005215,GO:0005290,GO:0005342,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006839,GO:0006855,GO:0006865,GO:0008150,GO:0008324,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015174,GO:0015179,GO:0015181,GO:0015189,GO:0015238,GO:0015318,GO:0015711,GO:0015802,GO:0015807,GO:0015809,GO:0015849,GO:0015893,GO:0016020,GO:0016021,GO:0019866,GO:0022857,GO:0031090,GO:0031224,GO:0031966,GO:0031967,GO:0031975,GO:0034220,GO:0042221,GO:0042493,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045117,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0089709,GO:0098655,GO:0098656,GO:1901474,GO:1902022,GO:1902475,GO:1903401,GO:1903825,GO:1903826,GO:1905039,GO:1990822
KEGG ModuleM00415
KEGG Pathwayko00062,ko01110,ko04714,map00062,map01110,map04714
KEGG ReactionR09419,R10825
KEGG TC2.A.29.8
KEGG koko:K15109,ko:K15397
KEGG rclassRC00004,RC02888,RC02997
Seed eggNOG ortholog2880.D8LEZ5
Seed ortholog evalue2.3e-159
Seed ortholog score568.2
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1466.2733.1prot_E-siliculosus-1a_F_contig1466.2733.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1466 23980..25563 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927975.298207-CDS-E-siliculosus-1a_F_contig1466:23979..247771622927975.298207-CDS-E-siliculosus-1a_F_contig1466:23979..24777Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1466 23980..24777 -
1696318760.4697702-CDS-E-siliculosus-1a_F_contig1466:23979..247771696318760.4697702-CDS-E-siliculosus-1a_F_contig1466:23979..24777Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1466 23980..24777 -
1622927975.3195364-CDS-E-siliculosus-1a_F_contig1466:25464..255631622927975.3195364-CDS-E-siliculosus-1a_F_contig1466:25464..25563Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1466 25465..25563 -
1696318760.4825795-CDS-E-siliculosus-1a_F_contig1466:25464..255631696318760.4825795-CDS-E-siliculosus-1a_F_contig1466:25464..25563Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1466 25465..25563 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927975.3378322-UTR-E-siliculosus-1a_F_contig1466:25563..258091622927975.3378322-UTR-E-siliculosus-1a_F_contig1466:25563..25809Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1466 25564..25809 -
1696318760.490215-UTR-E-siliculosus-1a_F_contig1466:25563..258091696318760.490215-UTR-E-siliculosus-1a_F_contig1466:25563..25809Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1466 25564..25809 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1466.2733.1

>prot_E-siliculosus-1a_F_contig1466.2733.1 ID=prot_E-siliculosus-1a_F_contig1466.2733.1|Name=mRNA_E-siliculosus-1a_F_contig1466.2733.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=299bp
MTTAAEVDKVPVAAAKDVISSIFGSAACVYTGQPLDTIKVRMQARPDAFS
GTFQCLRRTLAEESITSLWKGSTPALGGAVLENMVAFGVNEQLKRVFPDK
DGSSAPWWQPILFGGVTGVFTTVVVCPSDVIKSKVQVGRSMRKGVAVSAG
TAAEGLPVLNATRMTAHILRTQGVRGLFVGLGAQFARDVPFYAAFFGTYE
TVVDRGKALPYEITPEVLYFLAGGMAGVVGWAAVMPLDSVKSIIQTTDKP
ESLLRTLQMVVRTKGWRALFIGLNAALARAFPANAALFLGYEIVRRAL*
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mRNA from alignment at E-siliculosus-1a_F_contig1466:23980..25809-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1466.2733.1 ID=mRNA_E-siliculosus-1a_F_contig1466.2733.1|Name=mRNA_E-siliculosus-1a_F_contig1466.2733.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1830bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1466:23980..25809- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ACATACCACGTGCAACACAGCTTGCTTGGCAGAGGCGCACACACCATCCC GTGACGTGAACTCACACGAACTTGAGATTCTGCTGGTACCCCTGCGCACG TCCCTTCGGAGCTCTGTACTCTGTACTCTTCTGCGGTGGTACATACCACA TCAATTCACCCATCGCACCCATTGCTCGACACCGACACATGTGGCGAGAA ACAACAACTACATACCGGCAGTGCCGCTAGCGGCTAGAGAGTGAGGATGA CTACAGCAGCCGAAGTGGACAAGGTTCCGGTAGCCGCGGCCAAGGACGTC ATCTCCAGCATCTTCGGGTCGGCAGCATGTGTTTACACCGGACAGGTTTG TTTGTTGGTTTGCCGAGATTTGTTCCGGGTTCGGACCTGCCGGTGATAGA GCCGAGTACCGAGGCCTGCCGTCTACGATAGAAAATCGACACACCGAAGG TTGCATGACATAAGGTATCACACCCCTTGGACCGATTTCCAAAGCTCGAT TACTCCACAGCAGGAGGAGTGGCGGTGCCGGAAATGACGGCTTTGGAACT GCCTCGTGGAGAGCTTTCCGAAAATGTATTATTTAAGGAGAAATATATAC ACGCACAGAAAGACTACCCATTATTTGATTTCGGAGTCGGCTTCGTGGAA CAAAGAGGTTTGAATTTCGGTACAGGAGGTGTGTTGTCTTACATCATGCA ACCTACAACTGTGCAGCTGTGCCGGCTACGATATAGACCAAGAGAACCAT CTTTGTTAAGGCCAAGCTTGCTTGGATGAGCAATCACGGGTCGAGAAAAG CAAAGAAAACTGTCTGACGGGTAGAAAATAAGTGCTGCGCGATGATTGGT TACAAACATCATGGAACAGACAGACAGTTTTCTGCACTAGCTTTTCCTGT GTTATCTAAGTGGTGTACATATATTTATGTATCGTTTTTACCGCTGGCAG TGATTGAACGCGTAACTACTGCTGTCGGATGCTCAGCGACGCCCCCCCCC CCCCCGGCCTTCCCCGCGCGCGTGCCGACCAGCCTCTAGACACCATCAAA GTGCGAATGCAAGCTCGTCCGGACGCCTTCAGTGGCACGTTCCAATGCCT GAGAAGGACACTAGCGGAGGAAAGCATTACGTCGCTGTGGAAGGGGTCCA CGCCGGCCCTGGGCGGCGCCGTCCTGGAGAACATGGTAGCTTTCGGGGTG AACGAGCAACTCAAGCGCGTCTTCCCGGACAAGGACGGGTCGTCAGCCCC GTGGTGGCAGCCGATACTGTTCGGAGGCGTGACCGGCGTCTTCACTACCG TGGTTGTCTGCCCCAGCGACGTCATCAAGTCCAAGGTTCAGGTCGGACGG TCAATGCGAAAGGGGGTAGCAGTGTCGGCCGGTACAGCGGCCGAGGGGCT GCCGGTGCTCAACGCGACACGGATGACGGCGCACATCTTGCGAACGCAGG GAGTGCGAGGCCTGTTCGTCGGGCTCGGTGCCCAGTTCGCCAGAGACGTA CCGTTCTACGCGGCGTTCTTCGGAACGTACGAGACGGTCGTCGACCGCGG GAAGGCGCTGCCGTACGAGATAACCCCGGAGGTGTTGTACTTCTTGGCGG GTGGCATGGCGGGGGTGGTTGGGTGGGCGGCCGTGATGCCGCTAGACTCG GTCAAGTCTATCATTCAGACGACGGACAAGCCCGAGTCTTTGCTCCGGAC CTTGCAAATGGTCGTCCGTACGAAGGGATGGCGAGCGCTCTTCATCGGCT TGAACGCCGCTCTTGCCCGTGCTTTTCCCGCGAACGCGGCCCTCTTCTTG GGATACGAAATCGTGCGCAGGGCGTTGTAG
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1466:23980..25809-

>mRNA_E-siliculosus-1a_F_contig1466.2733.1 ID=mRNA_E-siliculosus-1a_F_contig1466.2733.1|Name=mRNA_E-siliculosus-1a_F_contig1466.2733.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1794bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1466:23980..25809- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGACTACAGCAGCCGAAGTGGACAAGGTTCCGGTAGCCGCGGCCAAGGA
CGTCATCTCCAGCATCTTCGGGTCGGCAGCATGTGTTTACACCGGACAGA
TGACTACAGCAGCCGAAGTGGACAAGGTTCCGGTAGCCGCGGCCAAGGAC
GTCATCTCCAGCATCTTCGGGTCGGCAGCATGTGTTTACACCGGACAGCC
TCTAGACACCATCAAAGTGCGAATGCAAGCTCGTCCGGACGCCTTCAGTG
GCACGTTCCAATGCCTGAGAAGGACACTAGCGGAGGAAAGCATTACGTCG
CTGTGGAAGGGGTCCACGCCGGCCCTGGGCGGCGCCGTCCTGGAGAACAT
GGTAGCTTTCGGGGTGAACGAGCAACTCAAGCGCGTCTTCCCGGACAAGG
ACGGGTCGTCAGCCCCGTGGTGGCAGCCGATACTGTTCGGAGGCGTGACC
GGCGTCTTCACTACCGTGGTTGTCTGCCCCAGCGACGTCATCAAGTCCAA
GGTTCAGGTCGGACGGTCAATGCGAAAGGGGGTAGCAGTGTCGGCCGGTA
CAGCGGCCGAGGGGCTGCCGGTGCTCAACGCGACACGGATGACGGCGCAC
ATCTTGCGAACGCAGGGAGTGCGAGGCCTGTTCGTCGGGCTCGGTGCCCA
GTTCGCCAGAGACGTACCGTTCTACGCGGCGTTCTTCGGAACGTACGAGA
CGGTCGTCGACCGCGGGAAGGCGCTGCCGTACGAGATAACCCCGGAGGTG
TTGTACTTCTTGGCGGGTGGCATGGCGGGGGTGGTTGGGTGGGCGGCCGT
GATGCCGCTAGACTCGGTCAAGTCTATCATTCAGACGACGGACAAGCCCG
AGTCTTTGCTCCGGACCTTGCAAATGGTCGTCCGTACGAAGGGATGGCGA
GCGCTCTTCATCGGCTTGAACGCCGCTCTTGCCCGTGCTTTTCCCGCGAA
CGCGGCCCTCTTCTTGGGATACGAAATCGTGCGCAGGGCGTTGTAGCCTC
TAGACACCATCAAAGTGCGAATGCAAGCTCGTCCGGACGCCTTCAGTGGC
ACGTTCCAATGCCTGAGAAGGACACTAGCGGAGGAAAGCATTACGTCGCT
GTGGAAGGGGTCCACGCCGGCCCTGGGCGGCGCCGTCCTGGAGAACATGG
TAGCTTTCGGGGTGAACGAGCAACTCAAGCGCGTCTTCCCGGACAAGGAC
GGGTCGTCAGCCCCGTGGTGGCAGCCGATACTGTTCGGAGGCGTGACCGG
CGTCTTCACTACCGTGGTTGTCTGCCCCAGCGACGTCATCAAGTCCAAGG
TTCAGGTCGGACGGTCAATGCGAAAGGGGGTAGCAGTGTCGGCCGGTACA
GCGGCCGAGGGGCTGCCGGTGCTCAACGCGACACGGATGACGGCGCACAT
CTTGCGAACGCAGGGAGTGCGAGGCCTGTTCGTCGGGCTCGGTGCCCAGT
TCGCCAGAGACGTACCGTTCTACGCGGCGTTCTTCGGAACGTACGAGACG
GTCGTCGACCGCGGGAAGGCGCTGCCGTACGAGATAACCCCGGAGGTGTT
GTACTTCTTGGCGGGTGGCATGGCGGGGGTGGTTGGGTGGGCGGCCGTGA
TGCCGCTAGACTCGGTCAAGTCTATCATTCAGACGACGGACAAGCCCGAG
TCTTTGCTCCGGACCTTGCAAATGGTCGTCCGTACGAAGGGATGGCGAGC
GCTCTTCATCGGCTTGAACGCCGCTCTTGCCCGTGCTTTTCCCGCGAACG
CGGCCCTCTTCTTGGGATACGAAATCGTGCGCAGGGCGTTGTAG
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