mRNA_E-siliculosus-1a_F_contig14572.2675.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig14572.2675.1
Unique NamemRNA_E-siliculosus-1a_F_contig14572.2675.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig14572.2675.1 vs. uniprot
Match: A0A6H5JYD3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYD3_9PHAE)

HSP 1 Score: 473 bits (1217), Expect = 2.070e-159
Identity = 236/275 (85.82%), Postives = 251/275 (91.27%), Query Frame = 1
Query:    1 LIDTGASENMLDDRLIPGLKEIMREYKKLAKPKVVSVGGDHELNGNATGLIHCTVKDSGGKQQNVLLRGLVVPGLGRNVFSPTAQLKNGVKLVIEEGNPHLAIGGHVLPLKQDPRDMGMCSLDIEFKAAYEQRTGLTNPTSHALPDDQAFGKPDTVMADDDLGVAYSATVSANTWHRRLGHLNFRSMELLRKKEANGVEFSDSMTPCDICAISKSRQLAHPKKTTRQTTAPMQLVYTDNMGKITPLAKGGFGYVSKFTDAYSRMKEIYLLKVKSE 825
            LIDTGASENMLDDRLIPGLKEIMRE K+LAKPKVVSVGG HEL+GNATGLIHCTVKDS G+++ VLLRGLVVPGLGRNVFS  AQ+KNGVKLVIEEGNPHLA+GGH LPLKQDP DMGMCS+DIEF+AA EQ T  T PTSHALPDD+A GKPDTVM DDDLGVA +ATV+ANTWHR L HLNFRSMELLRKKE NGV+FSDSMTPCDICAISKSRQLAHP+KT R+TTAPMQLVYTDNMGK TPLAKGGFGYVSKFTDAYS MKEIYLLK  SE
Sbjct:  137 LIDTGASENMLDDRLIPGLKEIMRESKELAKPKVVSVGGGHELDGNATGLIHCTVKDSNGEKKAVLLRGLVVPGLGRNVFSRAAQIKNGVKLVIEEGNPHLAVGGHTLPLKQDPLDMGMCSVDIEFQAASEQTTASTKPTSHALPDDRAIGKPDTVMLDDDLGVACAATVNANTWHRWLRHLNFRSMELLRKKEDNGVDFSDSMTPCDICAISKSRQLAHPEKTNRETTAPMQLVYTDNMGKTTPLAKGGFGYVSKFTDAYSWMKEIYLLKAISE 411          
BLAST of mRNA_E-siliculosus-1a_F_contig14572.2675.1 vs. uniprot
Match: A0A6H5JSB5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSB5_9PHAE)

HSP 1 Score: 279 bits (714), Expect = 3.910e-85
Identity = 146/218 (66.97%), Postives = 163/218 (74.77%), Query Frame = 1
Query:    1 LIDTGASENMLDDRLIPGLKEIMREYKKLAKPKVVSVGGDHELNGNATGLIHCTVKDSGGKQQNVLLRGLVVPGLGRNVFSPTAQLKNGVKLVIEEGNPHLAIGGHVLPLKQDPRDMGMCSLDIEFKAAYEQRTGLTNPTSHALPDDQAFGKPDTVMADDDLGVAYSATVSANTWHRRLGHLNFRSMELLRKKEANGVEFSDSMTPCDICAISKSRQL 654
            L+DTGASENMLDDRLIPGLKE MRE+  LAKPKVVSVGGDH+L+GNATGLIHCT K +GG++Q VLLRGLVVPGLGRNVFSPTAQ+KNGVKLVIE+GNPHLA+GGH+LPL+QD RD+                                      V ADDDLG AY ATV+A T HRRLG+LNFRSMELLRKKE +GV+ SD MT CDICAISK RQL
Sbjct:  333 LVDTGASENMLDDRLIPGLKETMREFNHLAKPKVVSVGGDHKLDGNATGLIHCTGKYNGGRKQAVLLRGLVVPGLGRNVFSPTAQIKNGVKLVIEDGNPHLAVGGHILPLEQDSRDV--------------------------------------VTADDDLGFAYEATVNATTLHRRLGYLNFRSMELLRKKEGHGVDSSDYMTTCDICAISKGRQL 512          
BLAST of mRNA_E-siliculosus-1a_F_contig14572.2675.1 vs. uniprot
Match: A0A6H5KVF6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVF6_9PHAE)

HSP 1 Score: 258 bits (658), Expect = 3.980e-78
Identity = 136/278 (48.92%), Postives = 185/278 (66.55%), Query Frame = 1
Query:    1 LIDTGASENMLDDRLIPGLKEIMREYKKLAKPKVVSVGGDHELNGNATGLIHCTVKDSGGKQQNVLLRGLVVPGLGRNVFSPTAQLKNGVKLVIEEGNPHLAIGGHVLPLKQDPRDMGMCSLDIEFKAAYEQRTGLTNPTSHALPDDQAFGKPDTVMADDDLGVAYSATVSANTWHRRLGHLNFRSMELLRKKEANGVEFSDSMTPCDICAISKSRQLAHPKKTTRQTTAPMQLVYTDNMGKITPLAK---GGFGYVSKFTDAYSRMKEIYLLKVKSE 825
            L+DTGASE M D+RLIP     + +Y +   PK+V V G+ +L G ATG++HCTVKD+ G+Q  V ++GL+VPGLGRN+FSPT+ LK G++ V E+  PHL I G V+PL QDPRD GMC+LDI F+    Q +G  +   H     Q   +  T  A     V ++  VSA+TWHRRLGHLN RS+++LRK     V++ DS++PC +C I+K +Q  HPK++TR+ + P QLV  DNMG + P AK   G F Y  K TD Y++MKE+YLL+ KS+
Sbjct:  209 LVDTGASEPMFDNRLIPDGN--LHDYTQRNSPKIVDVAGERQLKGTATGILHCTVKDNRGQQLRVRIQGLIVPGLGRNIFSPTSLLKRGLRCVGEKSTPHLTIQGKVIPLTQDPRDQGMCTLDITFEQNV-QPSGTKSLVPH-----QKQSQTHTANA-----VCFTL-VSADTWHRRLGHLNARSLDILRKDTGTEVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKVTDDYTKMKEVYLLRKKSD 472          
BLAST of mRNA_E-siliculosus-1a_F_contig14572.2675.1 vs. uniprot
Match: A0A6H5LL42_9PHAE (Peptidase A2 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LL42_9PHAE)

HSP 1 Score: 247 bits (631), Expect = 6.150e-78
Identity = 134/278 (48.20%), Postives = 183/278 (65.83%), Query Frame = 1
Query:    1 LIDTGASENMLDDRLIPGLKEIMREYKKLAKPKVVSVGGDHELNGNATGLIHCTVKDSGGKQQNVLLRGLVVPGLGRNVFSPTAQLKNGVKLVIEEGNPHLAIGGHVLPLKQDPRDMGMCSLDIEFKAAYEQRTGLTNPTSHALPDDQAFGKPDTVMADDDLGVAYSATVSANTWHRRLGHLNFRSMELLRKKEANGVEFSDSMTPCDICAISKSRQLAHPKKTTRQTTAPMQLVYTDNMGKITPLAK---GGFGYVSKFTDAYSRMKEIYLLKVKSE 825
            L+DTGASE M DDRLIP     +++Y +   PK+V V G+ +L G ATG+++CTVKD+ G+Q  V ++GL+VPGLGRN FSPT+ LK G++ V+EE  PHLAI G V+PL QDPRD GMC+LDI F+    Q +G T+   H     Q   +  T  A     V ++  VSA+TWHRRLGHLN RS+++LRK    G++  DS++PC +C I+K +Q  H K++TR+ + P Q+V  DNM    P AK     F Y  K TD  ++MKE+YLL+ KS+
Sbjct:   39 LVDTGASETMFDDRLIPDGN--LQDYTQRNSPKIVDVAGESQLKGTATGVLNCTVKDNQGQQLRVRIQGLIVPGLGRNSFSPTSLLKKGLRCVVEESTPHLAIQGKVIPLTQDPRDQGMCTLDITFEQNV-QPSGTTSVLPH-----QKQSQTHTANA-----VCFTL-VSADTWHRRLGHLNARSLDILRKDTGTGMDNRDSLSPCGVCQITKHKQSPHQKQSTRELSRPGQVVVIDNMEPGNPPAKYEGASFPYACKITDDDTKMKEVYLLRKKSD 302          
BLAST of mRNA_E-siliculosus-1a_F_contig14572.2675.1 vs. uniprot
Match: A0A6H5KMG5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMG5_9PHAE)

HSP 1 Score: 257 bits (657), Expect = 5.440e-77
Identity = 134/277 (48.38%), Postives = 184/277 (66.43%), Query Frame = 1
Query:    4 IDTGASENMLDDRLIPGLKEIMREYKKLAKPKVVSVGGDHELNGNATGLIHCTVKDSGGKQQNVLLRGLVVPGLGRNVFSPTAQLKNGVKLVIEEGNPHLAIGGHVLPLKQDPRDMGMCSLDIEFKAAYEQRTGLTNPTSHALPDDQAFGKPDTVMADDDLGVAYSATVSANTWHRRLGHLNFRSMELLRKKEANGVEFSDSMTPCDICAISKSRQLAHPKKTTRQTTAPMQLVYTDNMGKITPLAK---GGFGYVSKFTDAYSRMKEIYLLKVKSE 825
            ++TGASE MLD+RLIP     + +Y +   PK+V V G  +L G ATG++HCTVKD+ G+Q  V ++G +VPGLGRN+FSPT+ LK G++ V+EE  PHL   G V+PL QDPRD GMC+LDI F+    Q +G  +   H     Q   +  T  A     V ++  VSA+TWHRRLGHLN RS+++LRK    GV++ DS++PC +C I+K +Q  HPK++TR+ + P QLV   NMG + P AK   G F YV K TD Y++MK++YLL+ KS+
Sbjct:  175 VNTGASETMLDNRLIPDGN--LHDYTQRNSPKIVGVAGGRQLKGTATGILHCTVKDNRGQQLRVRIQGFIVPGLGRNIFSPTSLLKKGLRCVVEESTPHLTFQGKVIPLTQDPRDQGMCTLDITFEQNV-QPSGTKSLVPH-----QKQSQTHTANA-----VCFTL-VSADTWHRRLGHLNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIGNMGPVNPPAKYKGGSFPYVRKITDDYTKMKKVYLLRKKSD 437          
BLAST of mRNA_E-siliculosus-1a_F_contig14572.2675.1 vs. uniprot
Match: A0A6H5JY69_9PHAE (Peptidase A2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY69_9PHAE)

HSP 1 Score: 241 bits (614), Expect = 2.270e-75
Identity = 130/280 (46.43%), Postives = 178/280 (63.57%), Query Frame = 1
Query:    1 LIDTGASENMLDDRLIPGLKEIMREYKKLAKPKVVSVGGDHELNGNATGLIHCTVKDSGGKQQNVLLRGLVVPGLGRNVFSPTAQLKNGVKLVIEEGNPHLAIGGHVLPLKQDPRDMGMCSLDIEFKAAYEQRTGLTNPTSHALPDDQAFGKPDTVMADDDLGVAYSA--TVSANTWHRRLGHLNFRSMELLRKKEANGVEFSDSMTPCDICAISKSRQLAHPKKTTRQTTAPMQLVYTDNMGKITPLAKGG---FGYVSKFTDAYSRMKEIYLLKVKSE 825
            L+D+GASE M D+RLIP      R  ++   PK++ V G+  L G  TG++HCT KD   +Q  V L+GL+VPGLGRN+F+PTA LK G++ V+E+  PHL IGG V+PLKQ+ +D GMC+L I FK      T  T P +        FGKP+ V  D       S   +VSA+ WHRRLGH+N R+ME+LR+  A GV++   ++PCD C I+K ++   PKKT+R  T P QLV  DNMG I P AK     + YV+K  D ++RM+E+YLL+ ++E
Sbjct:   24 LVDSGASETMFDNRLIPN----GRLEEERPTPKIIDVAGESRLRGTTTGILHCTFKDDKKQQLPVKLQGLIVPGLGRNIFAPTALLKKGLRSVLEDKTPHLTIGGVVVPLKQETQDQGMCTLAITFKGD-PASTSKTPPNNQEPGRKPKFGKPEAVQIDRTPRATCSVAMSVSADLWHRRLGHINPRAMEILRRNPATGVKYDGPVSPCDNCHITKHKKAPVPKKTSRVLTKPGQLVQFDNMGPIDPPAKYNGRTYSYVAKAIDIFTRMREVYLLRHRTE 298          
BLAST of mRNA_E-siliculosus-1a_F_contig14572.2675.1 vs. uniprot
Match: A0A6H5K6T1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6T1_9PHAE)

HSP 1 Score: 241 bits (614), Expect = 3.930e-73
Identity = 130/281 (46.26%), Postives = 180/281 (64.06%), Query Frame = 1
Query:    1 LIDTGASENMLDDRLIPGLKEIMREYKKLAKPKVVSVGGDHELNGNATGLIHCTVKDSGGKQQNVLLRGLVVPGLGRNVFSPTAQLKNGVKLVIEEGNPHLAIGGHVL-PLKQDPRDMGMCSLDIEFKAAYEQRTGLTNPTSHALPDDQAFGKPDTVMADDDLGVAYSA--TVSANTWHRRLGHLNFRSMELLRKKEANGVEFSDSMTPCDICAISKSRQLAHPKKTTRQTTAPMQLVYTDNMGKITPLAKGG---FGYVSKFTDAYSRMKEIYLLKVKSE 825
            L+D+GASE M D+RL+P      R  ++   PK++ V G+ +L G  TG++HCT+KD   +Q  V L+GL+VPGLGRN+F+PTA LK G++ V+E+  PHL IGG V+ PLKQ+ +D GMC+L I FK      T  T P +        FGKP+ V  D       S   +VSA+ WHRRLGH+N R+ME+LR+  A GV++   ++PCD C I+K ++   PKKT+R  T P QLV  DNMG I P AK     + YV+K TD  +RM+E+YLL+ ++E
Sbjct:   72 LVDSGASETMFDNRLVPN----GRLEEERPTPKIIDVAGESQLRGTTTGILHCTIKDDKEQQLPVKLQGLIVPGLGRNIFAPTALLKKGLRCVLEDKTPHLTIGGEVVVPLKQETQDQGMCTLAITFKGD-PASTSKTPPNNQEPGRKPKFGKPEAVQIDHTPHATCSVAMSVSADLWHRRLGHINPRAMEILRRNPATGVKYDGPVSPCDNCQITKHKKAPVPKKTSRVLTKPGQLVQFDNMGPIDPPAKYNGRTYSYVAKATDVITRMREMYLLRDRTE 347          
BLAST of mRNA_E-siliculosus-1a_F_contig14572.2675.1 vs. uniprot
Match: A0A6H5K9M6_9PHAE (gag_pre-integrs domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9M6_9PHAE)

HSP 1 Score: 234 bits (597), Expect = 8.080e-72
Identity = 125/269 (46.47%), Postives = 174/269 (64.68%), Query Frame = 1
Query:   28 MLDDRLIPGLKEIMREYKKLAKPKVVSVGGDHELNGNATGLIHCTVKDSGGKQQNVLLRGLVVPGLGRNVFSPTAQLKNGVKLVIEEGNPHLAIGGHVLPLKQDPRDMGMCSLDIEFKAAYEQRTGLTNPTSHALPDDQAFGKPDTVMADDDLGVAYSATVSANTWHRRLGHLNFRSMELLRKKEANGVEFSDSMTPCDICAISKSRQLAHPKKTTRQTTAPMQLVYTDNMGKITPLAK---GGFGYVSKFTDAYSRMKEIYLLKVKSE 825
            M D+ L+P     + +Y +    K+V V G  +L G ATG++HCTVKD+ G+Q  V ++GL+VPGLGRN+FSPT+ LK G++ V+EE  PHL I G V+PL QDPRD GMC+LDI F+    Q +G  +   H     Q   +  T  A     V ++  VSA+TWHRRLGHLN RS+++L K     V++ DS++PC +C I+K +Q  +PK++TR+ + P QLV  DNMG +TP AK   G F Y  K TD  ++MKE+YLL+ KS+
Sbjct:    1 MFDNCLVPDGN--LHDYTQRNSLKIVDVAGGSQLKGTATGILHCTVKDNRGQQLRVRIQGLIVPGLGRNIFSPTSLLKKGLRCVVEESTPHLPIQGKVIPLTQDPRDQGMCTLDITFEQNV-QPSGTKSLVPH-----QKQSQTHTANA-----VCFTL-VSADTWHRRLGHLNARSLDILTKDTGTRVDYRDSLSPCGVCQIAKHKQSPYPKQSTRELSRPGQLVVIDNMGPVTPPAKYKGGSFAYACKITDDCTKMKEVYLLRKKSD 255          
BLAST of mRNA_E-siliculosus-1a_F_contig14572.2675.1 vs. uniprot
Match: A0A6H5L1Z9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1Z9_9PHAE)

HSP 1 Score: 243 bits (621), Expect = 3.510e-70
Identity = 131/281 (46.62%), Postives = 181/281 (64.41%), Query Frame = 1
Query:    1 LIDTGASENMLDDRLIPGLKEIMREYKKLAKPKVVSVGGDHELNGNATGLIHCTVKDSGGKQQNVLLRGLVVPGLGRNVFSPTAQLKNGVKLVIEEGNPHLAIGGHVL-PLKQDPRDMGMCSLDIEFKAAYEQRTGLTNPTSHALPDDQAFGKPDTVMADDDLGVAYSA--TVSANTWHRRLGHLNFRSMELLRKKEANGVEFSDSMTPCDICAISKSRQLAHPKKTTRQTTAPMQLVYTDNMGKITPLAKGG---FGYVSKFTDAYSRMKEIYLLKVKSE 825
            L+D+GASE M D+RLIP      R  ++   PK++ V G+ +L G  TG++HCT+KD   +Q  V L+GL+VPGLGRN+F+PTA LK G++ V+E+  PHL IGG V+ PLKQ+ +D GMC+L I FK      T  T P +        FGKP+ V  D       S   +VSA+ WHRRLGH+N R+ME+LR+  A GV++   ++PCD C I+K ++   PKKT+R  T P QLV  DNMG I P AK     + YV+K TD ++RM+E+YLL+ ++E
Sbjct:  380 LVDSGASETMFDNRLIPN----GRLEEERPTPKIIDVAGESQLRGTTTGILHCTIKDDKEQQLPVKLQGLIVPGLGRNIFAPTALLKKGLRCVLEDKTPHLTIGGEVVVPLKQETQDQGMCTLAITFKGD-PASTSKTPPNNQEPGRKPKFGKPEAVQIDHTPHATCSVAMSVSADLWHRRLGHINPRAMEILRRNPATGVKYDGPVSPCDNCQITKHKKAPVPKKTSRVLTKPGQLVQFDNMGPIDPPAKYNGRTYSYVAKATDVFTRMREVYLLRDRTE 655          
BLAST of mRNA_E-siliculosus-1a_F_contig14572.2675.1 vs. uniprot
Match: A0A6H5JUN9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUN9_9PHAE)

HSP 1 Score: 242 bits (617), Expect = 9.470e-70
Identity = 130/281 (46.26%), Postives = 181/281 (64.41%), Query Frame = 1
Query:    1 LIDTGASENMLDDRLIPGLKEIMREYKKLAKPKVVSVGGDHELNGNATGLIHCTVKDSGGKQQNVLLRGLVVPGLGRNVFSPTAQLKNGVKLVIEEGNPHLAIGGHVL-PLKQDPRDMGMCSLDIEFKAAYEQRTGLTNPTSHALPDDQAFGKPDTVMADDDLGVAYSA--TVSANTWHRRLGHLNFRSMELLRKKEANGVEFSDSMTPCDICAISKSRQLAHPKKTTRQTTAPMQLVYTDNMGKITPLAKGG---FGYVSKFTDAYSRMKEIYLLKVKSE 825
            L+D+GASE M D+RLIP      R  ++   PK++ V G+ +L G  TG++HCT++D   +Q  V L+GL+VPGLGRN+F+PTA LK G++ V+E+  PHL IGG V+ PLKQ+ +D GMC+L I FK      T  T P +        FGKP+ V  D       S   +VSA+ WHRRLGH+N R+ME+LR+  A GV++   ++PCD C I+K ++   PKKT+R  T P QLV  DNMG I P AK     + YV+K TD ++RM+E+YLL+ ++E
Sbjct:  399 LVDSGASETMFDNRLIPN----GRLEEERPTPKIIDVAGESQLRGTTTGILHCTIEDDKEQQLPVKLQGLIVPGLGRNIFAPTALLKKGLRCVLEDKTPHLTIGGEVVVPLKQETQDQGMCTLAITFKGD-PASTSKTPPNNQEPGRKPKFGKPEAVQIDHTPHATCSVAMSVSADLWHRRLGHINPRAMEILRRNPATGVKYDGPVSPCDNCQITKHKKAPVPKKTSRVLTKPGQLVQFDNMGPIDPPAKYNGRTYSYVAKATDVFTRMREVYLLRDRTE 674          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig14572.2675.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JYD3_9PHAE2.070e-15985.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JSB5_9PHAE3.910e-8566.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KVF6_9PHAE3.980e-7848.92Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5LL42_9PHAE6.150e-7848.20Peptidase A2 domain-containing protein (Fragment) ... [more]
A0A6H5KMG5_9PHAE5.440e-7748.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JY69_9PHAE2.270e-7546.43Peptidase A2 domain-containing protein n=1 Tax=Ect... [more]
A0A6H5K6T1_9PHAE3.930e-7346.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K9M6_9PHAE8.080e-7246.47gag_pre-integrs domain-containing protein n=1 Tax=... [more]
A0A6H5L1Z9_9PHAE3.510e-7046.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUN9_9PHAE9.470e-7046.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig14572contigE-siliculosus-1a_F_contig14572:181..1005 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop0
Cds size798
Model size825
Exons1
Hectar predicted targeting categoryother localisation
Best eggNOG OGNA|NA|NA
Best tax levelMetazoa
COG Functional cat.L
EggNOG OGs3ACW4@33154,3BVPH@33208,COG2801@1,KOG0017@2759
EggNOG free text desc.Reverse transcriptase (RNA-dependent DNA polymerase)
Seed eggNOG ortholog400682.PAC_15703055
Seed ortholog evalue2.1e-10
Seed ortholog score73.2
Taxonomic scopeMetazoa
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927966.1377861-UTR-E-siliculosus-1a_F_contig14572:180..2071622927966.1377861-UTR-E-siliculosus-1a_F_contig14572:180..207Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig14572 181..207 +
1696318756.667615-UTR-E-siliculosus-1a_F_contig14572:180..2071696318756.667615-UTR-E-siliculosus-1a_F_contig14572:180..207Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig14572 181..207 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927966.154603-CDS-E-siliculosus-1a_F_contig14572:207..10051622927966.154603-CDS-E-siliculosus-1a_F_contig14572:207..1005Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig14572 208..1005 +
1696318756.6835024-CDS-E-siliculosus-1a_F_contig14572:207..10051696318756.6835024-CDS-E-siliculosus-1a_F_contig14572:207..1005Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig14572 208..1005 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig14572.2675.1prot_E-siliculosus-1a_F_contig14572.2675.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig14572 208..1005 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig14572.2675.1

>prot_E-siliculosus-1a_F_contig14572.2675.1 ID=prot_E-siliculosus-1a_F_contig14572.2675.1|Name=mRNA_E-siliculosus-1a_F_contig14572.2675.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=266bp
MLDDRLIPGLKEIMREYKKLAKPKVVSVGGDHELNGNATGLIHCTVKDSG
GKQQNVLLRGLVVPGLGRNVFSPTAQLKNGVKLVIEEGNPHLAIGGHVLP
LKQDPRDMGMCSLDIEFKAAYEQRTGLTNPTSHALPDDQAFGKPDTVMAD
DDLGVAYSATVSANTWHRRLGHLNFRSMELLRKKEANGVEFSDSMTPCDI
CAISKSRQLAHPKKTTRQTTAPMQLVYTDNMGKITPLAKGGFGYVSKFTD
AYSRMKEIYLLKVKSE
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mRNA from alignment at E-siliculosus-1a_F_contig14572:181..1005+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig14572.2675.1 ID=mRNA_E-siliculosus-1a_F_contig14572.2675.1|Name=mRNA_E-siliculosus-1a_F_contig14572.2675.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=825bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig14572:181..1005+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CTCATCGACACTGGAGCATCCGAGAACATGCTTGACGACCGCCTCATCCC AGGTCTGAAGGAGATAATGAGGGAGTACAAGAAACTCGCCAAACCAAAGG TGGTCTCGGTCGGCGGCGACCACGAGCTAAACGGGAACGCTACAGGGCTC ATCCATTGCACCGTCAAGGACAGCGGCGGCAAGCAACAGAACGTGCTCCT GCGAGGACTAGTCGTCCCCGGCCTCGGACGCAACGTCTTCTCACCTACCG CGCAGCTCAAGAATGGCGTCAAGCTGGTCATCGAGGAAGGCAACCCGCAC CTCGCGATAGGAGGCCACGTTTTGCCGCTGAAACAGGACCCGCGCGACAT GGGCATGTGCTCTCTTGACATAGAGTTCAAAGCCGCATACGAGCAAAGGA CAGGGCTCACGAACCCAACTTCCCACGCCCTTCCGGACGATCAGGCGTTT GGCAAGCCGGACACAGTTATGGCGGATGATGACCTAGGGGTCGCATACTC GGCTACAGTGAGCGCGAACACTTGGCACCGGCGGCTTGGACATCTCAACT TCCGGAGCATGGAACTGCTGCGCAAAAAGGAGGCCAACGGAGTCGAATTT TCGGACTCAATGACGCCGTGCGATATCTGCGCCATCAGCAAGAGCAGGCA GCTAGCACACCCGAAGAAGACCACTCGCCAGACGACGGCACCCATGCAAC TGGTATACACCGACAACATGGGAAAAATCACCCCGCTCGCGAAGGGAGGT TTTGGGTACGTTTCCAAATTCACGGACGCATACTCGCGGATGAAGGAAAT CTACCTGCTCAAGGTCAAGTCCGAA
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig14572:181..1005+

>mRNA_E-siliculosus-1a_F_contig14572.2675.1 ID=mRNA_E-siliculosus-1a_F_contig14572.2675.1|Name=mRNA_E-siliculosus-1a_F_contig14572.2675.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1596bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig14572:181..1005+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGCTTGACGACCGCCTCATCCCAGGTCTGAAGGAGATAATGAGGGAGTA
CAAGAAACTCGCCAAACCAAAGGTGGTCTCGGTCGGCGGCGACCACGAGC
TAAACGGGAACGCTACAGGGCTCATCCATTGCACCGTCAAGGACAGCGGC
GGCAAGCAACAGAACGTGCTCCTGCGAGGACTAGTCGTCCCCGGCCTCGG
ACGCAACGTCTTCTCACCTACCGCGCAGCTCAAGAATGGCGTCAAGCTGG
TCATCGAGGAAGGCAACCCGCACCTCGCGATAGGAGGCCACGTTTTGCCG
CTGAAACAGGACCCGCGCGACATGGGCATGTGCTCTCTTGACATAGAGTT
CAAAGCCGCATACGAGCAAAGGACAGGGCTCACGAACCCAACTTCCCACG
CCCTTCCGGACGATCAGGCGTTTGGCAAGCCGGACACAGTTATGGCGGAT
GATGACCTAGGGGTCGCATACTCGGCTACAGTGAGCGCGAACACTTGGCA
CCGGCGGCTTGGACATCTCAACTTCCGGAGCATGGAACTGCTGCGCAAAA
AGGAGGCCAACGGAGTCGAATTTTCGGACTCAATGACGCCGTGCGATATC
TGCGCCATCAGCAAGAGCAGGCAGCTAGCACACCCGAAGAAGACCACTCG
CCAGACGACGGCACCCATGCAACTGGTATACACCGACAACATGGGAAAAA
TCACCCCGCTCGCGAAGGGAGGTTTTGGGTACGTTTCCAAATTCACGGAC
GCATACTCGCGGATGAAGGAAATCTACCTGCTCAAGGTCAAGTCCGAAAT
GCTTGACGACCGCCTCATCCCAGGTCTGAAGGAGATAATGAGGGAGTACA
AGAAACTCGCCAAACCAAAGGTGGTCTCGGTCGGCGGCGACCACGAGCTA
AACGGGAACGCTACAGGGCTCATCCATTGCACCGTCAAGGACAGCGGCGG
CAAGCAACAGAACGTGCTCCTGCGAGGACTAGTCGTCCCCGGCCTCGGAC
GCAACGTCTTCTCACCTACCGCGCAGCTCAAGAATGGCGTCAAGCTGGTC
ATCGAGGAAGGCAACCCGCACCTCGCGATAGGAGGCCACGTTTTGCCGCT
GAAACAGGACCCGCGCGACATGGGCATGTGCTCTCTTGACATAGAGTTCA
AAGCCGCATACGAGCAAAGGACAGGGCTCACGAACCCAACTTCCCACGCC
CTTCCGGACGATCAGGCGTTTGGCAAGCCGGACACAGTTATGGCGGATGA
TGACCTAGGGGTCGCATACTCGGCTACAGTGAGCGCGAACACTTGGCACC
GGCGGCTTGGACATCTCAACTTCCGGAGCATGGAACTGCTGCGCAAAAAG
GAGGCCAACGGAGTCGAATTTTCGGACTCAATGACGCCGTGCGATATCTG
CGCCATCAGCAAGAGCAGGCAGCTAGCACACCCGAAGAAGACCACTCGCC
AGACGACGGCACCCATGCAACTGGTATACACCGACAACATGGGAAAAATC
ACCCCGCTCGCGAAGGGAGGTTTTGGGTACGTTTCCAAATTCACGGACGC
ATACTCGCGGATGAAGGAAATCTACCTGCTCAAGGTCAAGTCCGAA
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