mRNA_E-siliculosus-1a_F_contig14553.2668.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig14553.2668.1 vs. uniprot
Match: A0A6H5K2B3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2B3_9PHAE) HSP 1 Score: 170 bits (430), Expect = 5.900e-48 Identity = 88/131 (67.18%), Postives = 105/131 (80.15%), Query Frame = 3
Query: 6 SREGMEDGGSSDQDDHDTACGQNDKLSLLDEDDTMGPASEIHGMEIPDGFRLQEATPAALDNSLLQRGVLVRLSLGWFGGLITRHSQERTRHLYDYHAHFELDQSTRSMKPPLEKYNGDADAVAGSCVLLD 398
S EG+EDG SSD+D +TA GQ D+L L+D+DD+M +EIH MEIPDGFR+Q +TPAALD+SLLQRG+LVRL +GW GG+ITR SQERTRHLYDY H +LDQSTRSMK PLE Y D DAV S +LL+
Sbjct: 78 SGEGVEDGDSSDEDTRETASGQMDELRLVDDDDSMESDNEIHAMEIPDGFRIQASTPAALDSSLLQRGLLVRLGMGWLGGIITRQSQERTRHLYDYRVHLDLDQSTRSMKLPLEMYR-DPDAVVDSWILLE 207
BLAST of mRNA_E-siliculosus-1a_F_contig14553.2668.1 vs. uniprot
Match: A0A6H5L772_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L772_9PHAE) HSP 1 Score: 160 bits (406), Expect = 1.440e-44 Identity = 93/150 (62.00%), Postives = 105/150 (70.00%), Query Frame = 3
Query: 12 EGMEDGGSSDQDDH--------------------DTACGQNDKLSLLDEDDTMGPASEIHGMEIPDGFRLQEATPAALDNSLLQRGVLVRLSLGWFGGLITRHSQERTRHLYDYHAHFELDQSTRSMKPPLEKYNGDADAVAGSCVLLDG 401
E M +GGSSD+DD DTA GQND+LSLLDEDDTMGPA EI GME+PDGF LQEAT AALDNSLLQR VLV LS+ WF GLITR SQ+RTR Y F+LD+STRS K PL++Y+GD DAV GS VLL+G
Sbjct: 90 EDMNNGGSSDEDDEGKLDFLTMMMLLGFRTPLSADTARGQNDELSLLDEDDTMGPADEILGMEVPDGFSLQEATAAALDNSLLQRLVLVSLSIDWFAGLITRQSQQRTRQPDYYRVLFDLDESTRSTKLPLKRYSGDPDAVVGSWVLLEG 239
BLAST of mRNA_E-siliculosus-1a_F_contig14553.2668.1 vs. uniprot
Match: A0A6H5L5J8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5J8_9PHAE) HSP 1 Score: 161 bits (407), Expect = 2.000e-43 Identity = 81/120 (67.50%), Postives = 95/120 (79.17%), Query Frame = 3
Query: 36 SDQDDHDTACGQNDKLSLLDEDDTMGPASEIHGMEIPDGFRLQEATPAALDNSLLQRGVLVRLSLGWFGGLITRHSQERTRHLYDYHAHFELDQSTRSMKPPLEKYNGDADAVAGSCVLL 395
SD+D +TA GQ ++LSL+D+DD+M EIH MEIPDGF +Q TPAA+D+SLLQRGVLVRL +GWFGG+ITR SQERTRHLYDY H +LDQST SMK PLE Y G DAV GS +LL
Sbjct: 234 SDEDTRETASGQMEELSLVDDDDSMESDDEIHAMEIPDGFCIQACTPAAIDSSLLQRGVLVRLGMGWFGGVITRKSQERTRHLYDYRVHLDLDQSTSSMKLPLEMYRGVPDAVVGSWILL 353
BLAST of mRNA_E-siliculosus-1a_F_contig14553.2668.1 vs. uniprot
Match: A0A6H5KHL7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHL7_9PHAE) HSP 1 Score: 153 bits (387), Expect = 3.950e-43 Identity = 75/108 (69.44%), Postives = 86/108 (79.63%), Query Frame = 3
Query: 75 DKLSLLDEDDTMGPASEIHGMEIPDGFRLQEATPAALDNSLLQRGVLVRLSLGWFGGLITRHSQERTRHLYDYHAHFELDQSTRSMKPPLEKYNGDADAVAGSCVLLD 398
D+LS +D+DD+M EI MEIPDGFR+Q +TPAALDN LLQRG+LVRL +GWFGGLITR SQERTRHLYDY H +LDQSTR MK LE Y GD DAV GS +LL+
Sbjct: 2 DELSHVDDDDSMESDDEIRAMEIPDGFRIQASTPAALDNLLLQRGLLVRLGMGWFGGLITRQSQERTRHLYDYRVHLDLDQSTRGMKLQLEMYKGDPDAVVGSWILLE 109
BLAST of mRNA_E-siliculosus-1a_F_contig14553.2668.1 vs. uniprot
Match: A0A6H5JTC1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTC1_9PHAE) HSP 1 Score: 150 bits (379), Expect = 7.630e-40 Identity = 83/133 (62.41%), Postives = 99/133 (74.44%), Query Frame = 3
Query: 18 MEDGGSSDQDDHDTACGQNDKLSLLDEDDTMGPAS---EIHGMEIPDGFR--LQEATPAALDNSLLQRGVLVRLSLGWFGGLITRHSQERTRHLYDYHAHFELDQSTRSMKPPLEKYNGDADAVAGSCVLLDG 401
ME SSD+DD D + Q D+L+LLD+DD+M P EI GMEIP GFR +QEA P ALD LL+RGVLVRL +GWF GLIT+ SQ+ TRHLYDY ELDQSTR+MK PL+KY+GD+DA GS VLL+G
Sbjct: 164 MEGSDSSDEDDGDISQPQTDELALLDDDDSMDPQEPEDEIQGMEIPAGFRFRIQEAKPVALDRLLLRRGVLVRLGMGWFEGLITQQSQKDTRHLYDYSVQLELDQSTRTMKLPLDKYSGDSDAAGGSWVLLEG 296
BLAST of mRNA_E-siliculosus-1a_F_contig14553.2668.1 vs. uniprot
Match: A0A6H5K4S7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4S7_9PHAE) HSP 1 Score: 149 bits (376), Expect = 1.300e-39 Identity = 80/129 (62.02%), Postives = 95/129 (73.64%), Query Frame = 3
Query: 18 MEDGGSSDQDDHDTACGQNDKLSLLDEDDTM---GPASEIHGMEIPDGFRLQEATPAALDNSLLQRGVLVRLSLGWFGGLITRHSQERTRHLYDYHAHFELDQSTRSMKPPLEKYNGDADAVAGSCVLL 395
ME SSD+DD D + Q D+L+LLD+DD+M P EI GMEIP GFR+QEA P ALD LL+RGVLVRL +GWFGGLIT+ SQ+ TRHLYDY ELDQSTR MK PL+KY+GD+DA GS +
Sbjct: 146 MEGVDSSDEDDGDISQPQTDELALLDDDDSMEPQDPEDEIQGMEIPAGFRIQEAKPVALDRLLLRRGVLVRLGMGWFGGLITQQSQKDTRHLYDYCVQLELDQSTRKMKLPLDKYSGDSDAAVGSWFFI 274
BLAST of mRNA_E-siliculosus-1a_F_contig14553.2668.1 vs. uniprot
Match: A0A6H5KLT3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLT3_9PHAE) HSP 1 Score: 144 bits (362), Expect = 2.420e-39 Identity = 79/130 (60.77%), Postives = 95/130 (73.08%), Query Frame = 3
Query: 18 MEDGGSSDQDDHDTACGQNDKLSLLDEDDTMGP---ASEIHGMEIPDGFRLQEATPAALDNSLLQRGVLVRLSLGWFGGLITRHSQERTRHLYDYHAHFELDQSTRSMKPPLEKYNGDADAVAGSCVLLD 398
ME G SD+DD + + Q D+L+LLDEDD+M P E GMEIP GFRLQE+TPAALD LLQRGVLVRL +GWFGGLI + S +R HLYDY E+D STR++K PL+KY+GD DA GS VLL+
Sbjct: 1 MEGAGYSDEDDDNMSQSQTDELALLDEDDSMDPDDPEDETQGMEIPAGFRLQESTPAALDRLLLQRGVLVRLGMGWFGGLIIQQSPQR--HLYDYCVQLEVDHSTRNVKLPLDKYSGDPDAAVGSWVLLE 128
BLAST of mRNA_E-siliculosus-1a_F_contig14553.2668.1 vs. uniprot
Match: A0A6H5KMY4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMY4_9PHAE) HSP 1 Score: 146 bits (369), Expect = 2.630e-39 Identity = 81/130 (62.31%), Postives = 97/130 (74.62%), Query Frame = 3
Query: 18 MEDGGSSDQDDHDTACGQNDKLSLLDEDDTMGPAS---EIHGMEIPDGFRLQEATPAALDNSLLQRGVLVRLSLGWFGGLITRHSQERTRHLYDYHAHFELDQSTRSMKPPLEKYNGDADAVAGSCVLLD 398
ME SSD+DD D + Q D+L+LLD+DD+M P EI GMEIP GFR+Q+ATP ALD LL+RGVLVRL +G FGGLIT+ SQ+ TRHLYD ELDQSTR MK PL+KY+GD+DA GS VLL+
Sbjct: 82 MEGVDSSDEDDGDISQPQTDELALLDDDDSMDPQDPEDEIQGMEIPAGFRIQKATPVALDRLLLRRGVLVRLGMGGFGGLITQQSQKDTRHLYDCCVQLELDQSTRKMKLPLDKYSGDSDAAVGSWVLLE 211
BLAST of mRNA_E-siliculosus-1a_F_contig14553.2668.1 vs. uniprot
Match: A0A6H5JJC2_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJC2_9PHAE) HSP 1 Score: 149 bits (377), Expect = 4.880e-39 Identity = 80/129 (62.02%), Postives = 94/129 (72.87%), Query Frame = 3
Query: 18 MEDGGSSDQDDHDTACGQNDKLSLLDEDDTMGPAS---EIHGMEIPDGFRLQEATPAALDNSLLQRGVLVRLSLGWFGGLITRHSQERTRHLYDYHAHFELDQSTRSMKPPLEKYNGDADAVAGSCVLL 395
ME SSD+DD D + Q D+L+LLD+ D+M P EI GMEIP GFR+QEA P ALD LL+RGVLVRL +GWFGGLIT+ SQ+ TRHLYDY ELDQSTR MK PL+KY+GD+DA GSC
Sbjct: 238 MEGVDSSDEDDGDISQPQTDELALLDDGDSMDPQDPEDEIQGMEIPAGFRIQEANPVALDRLLLRRGVLVRLGMGWFGGLITQQSQKDTRHLYDYCVQLELDQSTRKMKFPLDKYSGDSDAAIGSCFFF 366
BLAST of mRNA_E-siliculosus-1a_F_contig14553.2668.1 vs. uniprot
Match: A0A6H5K5K9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5K9_9PHAE) HSP 1 Score: 142 bits (358), Expect = 6.270e-39 Identity = 77/129 (59.69%), Postives = 92/129 (71.32%), Query Frame = 3
Query: 18 MEDGGSSDQDDHDTACGQNDKLSLLDEDDTMGPAS---EIHGMEIPDGFRLQEATPAALDNSLLQRGVLVRLSLGWFGGLITRHSQERTRHLYDYHAHFELDQSTRSMKPPLEKYNGDADAVAGSCVLL 395
ME SSDQDD D + Q D+L+LLD+D +M P EI M+IP GFR+QEA P AL LL+RGVLVRL +GWFGGLIT+ SQ+ TRHLYDY ELD+STR MK PL+KY+GD+DA GSC
Sbjct: 1 MEGVDSSDQDDGDISQPQTDELALLDDDGSMNPQDPEDEIQRMKIPAGFRIQEAKPVALGRLLLRRGVLVRLGMGWFGGLITQQSQKDTRHLYDYCVQLELDRSTRKMKLPLDKYSGDSDAAVGSCFYF 129 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig14553.2668.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig14553.2668.1 >prot_E-siliculosus-1a_F_contig14553.2668.1 ID=prot_E-siliculosus-1a_F_contig14553.2668.1|Name=mRNA_E-siliculosus-1a_F_contig14553.2668.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=159bp MEDGGSSDQDDHDTACGQNDKLSLLDEDDTMGPASEIHGMEIPDGFRLQEback to top mRNA from alignment at E-siliculosus-1a_F_contig14553:2..1081+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig14553.2668.1 ID=mRNA_E-siliculosus-1a_F_contig14553.2668.1|Name=mRNA_E-siliculosus-1a_F_contig14553.2668.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1080bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig14553:2..1081+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig14553:2..1081+ >mRNA_E-siliculosus-1a_F_contig14553.2668.1 ID=mRNA_E-siliculosus-1a_F_contig14553.2668.1|Name=mRNA_E-siliculosus-1a_F_contig14553.2668.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=954bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig14553:2..1081+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |