mRNA_E-siliculosus-1a_F_contig14504.2630.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig14504.2630.1 vs. uniprot
Match: A0A5S3PHY2_9FLAO (Uncharacterized protein n=1 Tax=Maribacter algarum TaxID=2578118 RepID=A0A5S3PHY2_9FLAO) HSP 1 Score: 223 bits (569), Expect = 1.080e-72 Identity = 115/151 (76.16%), Postives = 133/151 (88.08%), Query Frame = 1
Query: 1 MEMTKTTCCKTKYAAPKKTEAANGSMSFLSTLILILIPKCPLCLSAYMSAMVLFFDIQYTTLVPILLHTKPVMGLLIITMILLNRKDKRTLIALAIAGIALTFLILKTYYSIAVFMWAWFIYIAFVFAIWYNGNFQYFYRFIRSRKKEEIV 453
ME+ KT CCK+K KK EAANGSMSFLST++LILIPKCPLC++AYMSAMVLFFDI+YTTLVP+LLHTKP+MGLLI+TMILLNRKDKRTLI+L IA +ALTFL+LKTY+ IA+ M W IYIAF+FAIWYNGNFQYFYRFIR + E+V
Sbjct: 1 MEIAKTGCCKSKMQTTKKVEAANGSMSFLSTILLILIPKCPLCMTAYMSAMVLFFDIEYTTLVPVLLHTKPIMGLLIVTMILLNRKDKRTLISLLIASVALTFLVLKTYFGIALLMPDWLIYIAFIFAIWYNGNFQYFYRFIRFGRNNEMV 151
BLAST of mRNA_E-siliculosus-1a_F_contig14504.2630.1 vs. uniprot
Match: A0A1T5BLK7_9FLAO (Uncharacterized protein n=2 Tax=Maribacter TaxID=252356 RepID=A0A1T5BLK7_9FLAO) HSP 1 Score: 223 bits (567), Expect = 2.400e-72 Identity = 110/152 (72.37%), Postives = 137/152 (90.13%), Query Frame = 1
Query: 1 MEMTKTTCCKTKYAAPKKTEAANGSMSFLSTLILILIPKCPLCLSAYMSAMVLFFDIQYTTLVPILLHTKPVMGLLIITMILLNRKDKRTLIALAIAGIALTFLILKTYYSIAVFMWAWFIYIAFVFAIWYNGNFQYFYRFIRSRKKEEIVS 456
ME KTTCCKTK+ + KK EAA+GSMSF+ST+++ILIPKCPLCL+AYMSAMVLFFD++Y+TLVP+LLHTKP+M LLIITMILLNRKDKRT I+L IAGIALTFL+LKTY++ A+ + W +YIAF+FAIWYNGNFQYFYRF++S+K ++V+
Sbjct: 1 METIKTTCCKTKFVSVKKVEAASGSMSFISTILMILIPKCPLCLTAYMSAMVLFFDVEYSTLVPVLLHTKPIMALLIITMILLNRKDKRTYISLGIAGIALTFLVLKTYFATALLLPDWILYIAFIFAIWYNGNFQYFYRFLKSKKNSQVVA 152
BLAST of mRNA_E-siliculosus-1a_F_contig14504.2630.1 vs. uniprot
Match: A0A5B7SV61_9FLAO (Uncharacterized protein n=1 Tax=Aggregatimonas sangjinii TaxID=2583587 RepID=A0A5B7SV61_9FLAO) HSP 1 Score: 220 bits (560), Expect = 3.300e-71 Identity = 112/151 (74.17%), Postives = 132/151 (87.42%), Query Frame = 1
Query: 1 MEMTKTTCCKTKYAAPKKTEAANGSMSFLSTLILILIPKCPLCLSAYMSAMVLFFDIQYTTLVPILLHTKPVMGLLIITMILLNRKDKRTLIALAIAGIALTFLILKTYYSIAVFMWAWFIYIAFVFAIWYNGNFQYFYRFIRSRKKEEIV 453
ME+TKT CCKTK PKK EAA GSMSF ST++LIL+PKCPLCL+AYMSA+VLFFDI+YTTLVP+LLHTKP+MGL II IL+NRKD RTLIALAIAG+ALTFL+LKTY+ A+F+ W IYIAF+FAIWYNGNF+YFYRFIR +K E++
Sbjct: 1 MEITKTGCCKTKLHTPKKVEAATGSMSFFSTILLILVPKCPLCLTAYMSALVLFFDIEYTTLVPVLLHTKPIMGLFIIITILMNRKDNRTLIALAIAGLALTFLVLKTYFVSALFLPDWIIYIAFIFAIWYNGNFRYFYRFIRFSRKGEVI 151
BLAST of mRNA_E-siliculosus-1a_F_contig14504.2630.1 vs. uniprot
Match: UPI00126A7A94 (hypothetical protein n=1 Tax=Pelagihabitans pacificus TaxID=2696054 RepID=UPI00126A7A94) HSP 1 Score: 181 bits (460), Expect = 3.950e-56 Identity = 99/148 (66.89%), Postives = 118/148 (79.73%), Query Frame = 1
Query: 1 MEMTKTTCCKTKYAAPKKTEAANGSMSFLSTLILILIPKCPLCLSAYMSAMVLFFDIQYTTLVPILLHTKPVMGLLIITMILLNRKDKRTLIALAIAGIALTFLILKTYYSIAVFMWAWFIYIAFVFAIWYNGNFQYFYRFIRSRKKE 444
ME +T CCKTK ++ K ANGSMSFLST++LIL+PKCPLCL+AYMSA+VLFFDI L P LLH KPVM +LII +ILLNRKD+RTL++L+I+ +AL FLI KTYY+ AVF W +Y AFVFAIWYNGNF+YFYRFIR R E
Sbjct: 1 METVETGCCKTKRSSQNKMSGANGSMSFLSTVLLILLPKCPLCLTAYMSAVVLFFDIDNAQLAPFLLHAKPVMAILIILLILLNRKDRRTLVSLSISVVALGFLIGKTYYNTAVFP-DWLLYTAFVFAIWYNGNFRYFYRFIRFRHNE 147
BLAST of mRNA_E-siliculosus-1a_F_contig14504.2630.1 vs. uniprot
Match: UPI001CCB6B42 (hypothetical protein n=1 Tax=Robertkochia marina TaxID=1227945 RepID=UPI001CCB6B42) HSP 1 Score: 123 bits (309), Expect = 4.350e-33 Identity = 72/149 (48.32%), Postives = 102/149 (68.46%), Query Frame = 1
Query: 1 MEMTKTTCCKT-KYAAPKKTEA-ANGSMSFLSTLILILIPKCPLCLSAYMSAMVLFFDIQYTTLVPILLHTKPVMGLLIITMILLNRKDKRTLIALAIAGIALTFLILKTYYSIAVFMWAWFIYIAFVFAIWYNGNFQYFYRFIRSRKK 441
M+ KT+CC K A KK + +G MSFLST ++I+IPKCP C++AY +++LFFDI+ L P++ H KPV+GL+II +I N K++ +AL IA A L+L TY +I + + W IY+AF FA WYNGNF+YFY F++S K+
Sbjct: 1 MKAEKTSCCNAEKVVAVKKAPSFKSGFMSFLSTALIIIIPKCPFCIAAYAGSLLLFFDIEIMALQPVVDHGKPVLGLIIICLIAFNYNVKKSKVALGIAITAFAILLLATYANIHL-LPEWLIYLAFFFAAWYNGNFKYFYSFLKSGKQ 148
BLAST of mRNA_E-siliculosus-1a_F_contig14504.2630.1 vs. uniprot
Match: A0A4S3M3K0_9FLAO (Uncharacterized protein n=1 Tax=Robertkochia marina TaxID=1227945 RepID=A0A4S3M3K0_9FLAO) HSP 1 Score: 122 bits (305), Expect = 1.390e-32 Identity = 69/149 (46.31%), Postives = 100/149 (67.11%), Query Frame = 1
Query: 1 MEMTKTTCCKTKYAAPKKTEAA--NGSMSFLSTLILILIPKCPLCLSAYMSAMVLFFDIQYTTLVPILLHTKPVMGLLIITMILLNRKDKRTLIALAIAGIALTFLILKTYYSIAVFMWAWFIYIAFVFAIWYNGNFQYFYRFIRSRKK 441
M+ KT+CC + A K +G MSFLST ++I+IPKCP C++AY ++++FFDI+ L PI+ H KPV+GL+II +I N K++ +AL IA A+T L+L TY + + + W IY+AF FA WYNGNF+YFY F+R ++
Sbjct: 1 MKPEKTSCCNAEKAVAVKNAPTFKSGFMSFLSTALIIIIPKCPFCIAAYAGSILMFFDIEIMALQPIVDHGKPVLGLIIIALIAFNYNVKKSKVALGIALAAMTVLLLTTYGKVYI-VPEWMIYLAFFFAAWYNGNFKYFYSFLRRGRQ 148
BLAST of mRNA_E-siliculosus-1a_F_contig14504.2630.1 vs. uniprot
Match: A0A559PNC3_9FLAO (Uncharacterized protein n=1 Tax=Gillisia sp. Hel_I_86 TaxID=1249981 RepID=A0A559PNC3_9FLAO) HSP 1 Score: 121 bits (304), Expect = 2.150e-32 Identity = 67/148 (45.27%), Postives = 100/148 (67.57%), Query Frame = 1
Query: 1 MEMTKTTCCKTKYAAPKKTEAA--NGSMSFLSTLILILIPKCPLCLSAYMSAMVLFFDIQYTTLVPILLHTKPVMGLLIITMILLNRKDKRTLIALAIAGIALTFLILKTYYSIAVFMWAWFIYIAFVFAIWYNGNFQYFYRFIRSRK 438
ME T+CC ++ A K +G MSFLST ++I++PKCP C++AY A+++FFD++ L+P LH KPV+G++II +I N K++ IAL+ AL L+L TY +I + + W IYI F+FA+WYNGNF+YFY F+++ K
Sbjct: 1 MESENTSCCNSQETAVLKKAHTFKSGLMSFLSTALIIVLPKCPFCVAAYSGAILMFFDVENEALIPFFLHGKPVLGVVIIALIFFNFNTKKSKIALSXXIFALILLLLSTYGNIRL-VPDWIIYIGFLFAVWYNGNFRYFYNFLKTSK 147
BLAST of mRNA_E-siliculosus-1a_F_contig14504.2630.1 vs. uniprot
Match: A0A2E4Q9W3_9FLAO (Uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium TaxID=1871037 RepID=A0A2E4Q9W3_9FLAO) HSP 1 Score: 105 bits (261), Expect = 6.620e-26 Identity = 62/144 (43.06%), Postives = 94/144 (65.28%), Query Frame = 1
Query: 1 MEMTKTTCCKTKYAAPKKTEAANGS--MSFLSTLILILIPKCPLCLSAYMSAMVLFFDIQYTTLVPILLHTKPVMGLLIITMILLNRKDKRTLIALAIAGIALTFLILKTYYSIAVFMWAWFIYIAFVFAIWYNGNFQYFYRFI 426
M+ T CCK + KKT N S SF ++++LIL PKCP C+ AY S+++LF DI+ + L+PI+ H KP++G L + +I N K K+T+I+L++ IA+ FL++ Y S+ +F W IY F+F++WYN NF +F FI
Sbjct: 1 MKNTTDLCCK--KISSKKTWKFNTSENASFFTSILLILAPKCPYCILAYSSSILLFLDIETSPLMPIMSHLKPLLGGLTLLIIYFNYKGKKTIISLSLGSIAMIFLLISNYSSLLIFQ-DWLIYSIFIFSVWYNANFIFFKNFI 141 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig14504.2630.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig14504.2630.1 >prot_E-siliculosus-1a_F_contig14504.2630.1 ID=prot_E-siliculosus-1a_F_contig14504.2630.1|Name=mRNA_E-siliculosus-1a_F_contig14504.2630.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=153bp MEMTKTTCCKTKYAAPKKTEAANGSMSFLSTLILILIPKCPLCLSAYMSAback to top mRNA from alignment at E-siliculosus-1a_F_contig14504:294..752- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig14504.2630.1 ID=mRNA_E-siliculosus-1a_F_contig14504.2630.1|Name=mRNA_E-siliculosus-1a_F_contig14504.2630.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=459bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig14504:294..752- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig14504:294..752- >mRNA_E-siliculosus-1a_F_contig14504.2630.1 ID=mRNA_E-siliculosus-1a_F_contig14504.2630.1|Name=mRNA_E-siliculosus-1a_F_contig14504.2630.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=918bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig14504:294..752- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |