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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Start | 0 |
| Stop | 1 |
| Cds size | 843 |
| Model size | 843 |
| Exons | 3 |
| Ec32 ortholog | Ec-01_010390.3 |
| Ec32 ortholog description | Tetratricopeptide-like helical domain |
| Hectar predicted targeting category | other localisation |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1450.2629.1 >prot_E-siliculosus-1a_F_contig1450.2629.1 ID=prot_E-siliculosus-1a_F_contig1450.2629.1|Name=mRNA_E-siliculosus-1a_F_contig1450.2629.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=281bp
ALVLLIEASIYQSAGRDDDALSMLLRAEKEVTYIDDGDSFLRETLLASVL
SEMGVTLYYSSQKTLSLRCFRLALVVRHSILSRSSSEHHMEKGEPASEVE
AGWKNGAHSYGTPASSVAAAEAGEAAAAIALNNVAVGLAGTGETFPAVQA
LEISSMITTSALGVEHPRSTIVSRNLALVKAVKCRGRHSSRDSGRRALQR
WEKDMWRSLGNRQWTSHHADAVDDLVLYNGVAHRTSRVIPGGFVFAGKLP
PAIDPSKASGSKGRRKKKGAKKRGKSARRR* back to topmRNA from alignment at E-siliculosus-1a_F_contig1450:23956..25308+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-siliculosus-1a_F_contig1450.2629.1 ID=mRNA_E-siliculosus-1a_F_contig1450.2629.1|Name=mRNA_E-siliculosus-1a_F_contig1450.2629.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1353bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1450:23956..25308+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GCTCTGGTGCTTTTAATCGAGGCAAGCATTTACCAGTCGGCGGGAAGAGA
CGACGATGCACTCTCGATGCTGCTGAGGGCCGAGAAAGAGGTTACCTACA
TCGACGATGGCGACTCATTTCTGCGCGAGACGCTCCTTGCATCTGTTCTG
AGTGAGATGGGGTGAGCTATCGACCGTGAGAAACGTAGTACATAGACCAG
TATTCCGGATCAACGCATGCATCCTAACGTTCGTGAGCCGTGGGCAAGTA
CCCAGAAGGTATTGCTGAGCTGCATATTTTGTGTAGTTTTGTCAAGTCGT
ACCACCCTACCACCCGCCCTGCTGCGACGCCGTGTTACAGCACTCCCTTT
TGCACGGCTGCACCAAACTACCCTGTCCCCGCCCCCAACTTCCCCCCCAA
CCTGCAGTGTCACCCTCTACTACTCCAGCCAAAAAACTCTCAGCCTCCGC
TGCTTCAGACTGGCGCTGGTTGTTCGACACAGCATTCTCTCGCGCAGTAG
TAGCGAACATCACATGGAGAAAGGAGAACCCGCCAGCGAAGTGGAAGCTG
GGTGGAAGAACGGAGCACACAGCTACGGGACGCCGGCCTCCAGCGTCGCC
GCCGCCGAGGCCGGGGAGGCCGCGGCGGCTATCGCGCTGAACAACGTGGC
CGTGGGCTTGGCCGGAACGGGAGAGACCTTCCCTGCAGTGCAGGCACTAG
AGATTTCGTCGATGATCACAACGTGAGTGGGTGCCATGACTCAGTGGGTG
GGGGCTAAGGCAAGCGGATGCTCCAGGGATGATGATAGCCTCATGTCGAA
CACGAAACAACAAGAAGATTGAGGCTCTAAAAGAGGGCTATCGCCAGCCT
CCCCAACACCTGCGTTCATCTTCTGTGCTACTACTCTGTATTCTTTACAG
ATAATAGAGGTATCATTTTTCCTTTAATATCGAAAGGATTTCAAATGATT
GTTACAACGCTGCCACGTCGCGCATCCCTAAACCAGCTCTGCGTTGGGAG
TTGAGCACCCGAGATCGACTATAGTATCGAGGAACCTGGCCCTCGTGAAG
GCCGTCAAATGCCGCGGCAGGCATAGCTCTCGAGACAGCGGGCGACGAGC
TCTCCAGCGATGGGAGAAGGACATGTGGCGCTCACTGGGAAACAGACAAT
GGACCTCGCACCACGCAGACGCCGTTGACGATCTTGTCCTGTACAACGGG
GTAGCACATCGAACCTCGCGCGTGATCCCCGGGGGGTTCGTCTTCGCTGG
AAAACTTCCGCCCGCCATCGATCCGAGTAAGGCCAGCGGTAGCAAGGGAA
GGCGCAAAAAGAAGGGGGCTAAGAAAAGGGGCAAATCGGCGCGTCGGCGG
TGA back to topCoding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1450:23956..25308+ >mRNA_E-siliculosus-1a_F_contig1450.2629.1 ID=mRNA_E-siliculosus-1a_F_contig1450.2629.1|Name=mRNA_E-siliculosus-1a_F_contig1450.2629.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1686bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1450:23956..25308+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GCTCTGGTGCTTTTAATCGAGGCAAGCATTTACCAGTCGGCGGGAAGAGA
CGACGATGCACTCTCGATGCTGCTGAGGGCCGAGAAAGAGGTTACCTACA
TCGACGATGGCGACTCATTTCTGCGCGAGACGCTCCTTGCATCTGTTCTG
AGTGAGATGGGGCTCTGGTGCTTTTAATCGAGGCAAGCATTTACCAGTCG
GCGGGAAGAGACGACGATGCACTCTCGATGCTGCTGAGGGCCGAGAAAGA
GGTTACCTACATCGACGATGGCGACTCATTTCTGCGCGAGACGCTCCTTG
CATCTGTTCTGAGTGAGATGGGTGTCACCCTCTACTACTCCAGCCAAAAA
ACTCTCAGCCTCCGCTGCTTCAGACTGGCGCTGGTTGTTCGACACAGCAT
TCTCTCGCGCAGTAGTAGCGAACATCACATGGAGAAAGGAGAACCCGCCA
GCGAAGTGGAAGCTGGGTGGAAGAACGGAGCACACAGCTACGGGACGCCG
GCCTCCAGCGTCGCCGCCGCCGAGGCCGGGGAGGCCGCGGCGGCTATCGC
GCTGAACAACGTGGCCGTGGGCTTGGCCGGAACGGGAGAGACCTTCCCTG
CAGTGCAGGCACTAGAGATTTCGTCGATGATCACAACTGTCACCCTCTAC
TACTCCAGCCAAAAAACTCTCAGCCTCCGCTGCTTCAGACTGGCGCTGGT
TGTTCGACACAGCATTCTCTCGCGCAGTAGTAGCGAACATCACATGGAGA
AAGGAGAACCCGCCAGCGAAGTGGAAGCTGGGTGGAAGAACGGAGCACAC
AGCTACGGGACGCCGGCCTCCAGCGTCGCCGCCGCCGAGGCCGGGGAGGC
CGCGGCGGCTATCGCGCTGAACAACGTGGCCGTGGGCTTGGCCGGAACGG
GAGAGACCTTCCCTGCAGTGCAGGCACTAGAGATTTCGTCGATGATCACA
ACCTCTGCGTTGGGAGTTGAGCACCCGAGATCGACTATAGTATCGAGGAA
CCTGGCCCTCGTGAAGGCCGTCAAATGCCGCGGCAGGCATAGCTCTCGAG
ACAGCGGGCGACGAGCTCTCCAGCGATGGGAGAAGGACATGTGGCGCTCA
CTGGGAAACAGACAATGGACCTCGCACCACGCAGACGCCGTTGACGATCT
TGTCCTGTACAACGGGGTAGCACATCGAACCTCGCGCGTGATCCCCGGGG
GGTTCGTCTTCGCTGGAAAACTTCCGCCCGCCATCGATCCGAGTAAGGCC
AGCGGTAGCAAGGGAAGGCGCAAAAAGAAGGGGGCTAAGAAAAGGGGCAA
ATCGGCGCGTCGGCGGTGACTCTGCGTTGGGAGTTGAGCACCCGAGATCG
ACTATAGTATCGAGGAACCTGGCCCTCGTGAAGGCCGTCAAATGCCGCGG
CAGGCATAGCTCTCGAGACAGCGGGCGACGAGCTCTCCAGCGATGGGAGA
AGGACATGTGGCGCTCACTGGGAAACAGACAATGGACCTCGCACCACGCA
GACGCCGTTGACGATCTTGTCCTGTACAACGGGGTAGCACATCGAACCTC
GCGCGTGATCCCCGGGGGGTTCGTCTTCGCTGGAAAACTTCCGCCCGCCA
TCGATCCGAGTAAGGCCAGCGGTAGCAAGGGAAGGCGCAAAAAGAAGGGG
GCTAAGAAAAGGGGCAAATCGGCGCGTCGGCGGTGA back to top
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