mRNA_E-siliculosus-1a_F_contig1446.2608.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1446.2608.1
Unique NamemRNA_E-siliculosus-1a_F_contig1446.2608.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1446.2608.1 vs. uniprot
Match: A0A6H5KNJ0_9PHAE (N-acetyltransferase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNJ0_9PHAE)

HSP 1 Score: 514 bits (1325), Expect = 6.730e-173
Identity = 356/409 (87.04%), Postives = 360/409 (88.02%), Query Frame = 3
Query:  120 MIIRENARLFFLSALSSNAKCEDVLRPSDFDFRLARKSDIKSIRHCNLETLPENYSTDFYDTHIKDWPELALVAEHADRRRNEDQQPQVVGYVLGRIEVNNANXXXXXXTALPGWSCRTQKSGRGGAMVIPPPTGHVTSLAVLPGFRRCGAASQLMDMLHERMNYHYKANKVSLHVRKSNRGAIRLYEELLGYKVAGVASSYYSDGEDAFVMEAELPEVDSQPADNIRGASALALPRSLDGTSTTVRSTSGRESAGFVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVYSRNNVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSRNCGLGRRGYGTMSSSRGVQHPCGDSGGGAAATA 1346
            MIIRENARLFFLSALSSNAKCEDVLRPSDFDFRLARKSDIKSIRHCNLETLPENYSTDFYDTHIKDWPELALVAEHADRRRNEDQQPQVVGYVLGRIE+NNANXXXXXXTALPGWSCRTQKSGRGGAM+  PPTGHVTSLAVLPGFRRCGAASQLMDMLHERMNYHY+ANKVSLHVRKSNRGAIRLYEELLGYKVAGVASSYYSDGEDAFVMEAELPEVDSQPADNIRGASAL  PRSLDGTSTTVRSTSGRE AG VT      XXXXXXXXXXXXX                RVYSRNNVG    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX               GSR+CGL RRGYGTMS SRGVQHPCGDSGGGAAATA
Sbjct:    1 MIIRENARLFFLSALSSNAKCEDVLRPSDFDFRLARKSDIKSIRHCNLETLPENYSTDFYDTHIKDWPELALVAEHADRRRNEDQQPQVVGYVLGRIEINNANXXXXXXTALPGWSCRTQKSGRGGAMMKAPPTGHVTSLAVLPGFRRCGAASQLMDMLHERMNYHYRANKVSLHVRKSNRGAIRLYEELLGYKVAGVASSYYSDGEDAFVMEAELPEVDSQPADNIRGASAL--PRSLDGTSTTVRSTSGRERAGLVTTAAANSXXXXXXXXXXXXXLVTASSASGAGADH--RVYSRNNVGFVTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------GSRSCGLDRRGYGTMSGSRGVQHPCGDSGGGAAATA 390          
BLAST of mRNA_E-siliculosus-1a_F_contig1446.2608.1 vs. uniprot
Match: D7FT09_ECTSI (N-acetyltransferase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT09_ECTSI)

HSP 1 Score: 426 bits (1096), Expect = 1.400e-140
Identity = 224/240 (93.33%), Postives = 227/240 (94.58%), Query Frame = 3
Query:  120 MIIRENARLFFLSALSSNAKCEDVLRPSDFDFRLARKSDIKSIRHCNLETLPENYSTDFYDTHIKDWPELALVAEHADRRRNEDQQPQVVGYVLGRIEVNNANXXXXXX--TALPGWSCRTQKSGRGGAMVIPPPTGHVTSLAVLPGFRRCGAASQLMDMLHERMNYHYKANKVSLHVRKSNRGAIRLYEELLGYKVAGVASSYYSDGEDAFVMEAELPEVDSQPADNI--RGASALALP 827
            MIIRENARLFFLSALSSNAKCEDVLRPSDFDFRLARKSDIKSIRHCNLETLPENYSTDFYDTHIKDWPELALVAEHADRRRNEDQQPQVVGYVLGRIEVN+ANXXXXXX  TALPGWSCRTQKSGRGGAM IPPPTGHVTSLAVLPGFRRCGAASQLMDMLHERMNYHYKANKVSLHVRKSNRGAIRLYEELLGYKVAGVASSYYSDGEDAFVMEAELPEVDSQ    +  +G  AL  P
Sbjct:    1 MIIRENARLFFLSALSSNAKCEDVLRPSDFDFRLARKSDIKSIRHCNLETLPENYSTDFYDTHIKDWPELALVAEHADRRRNEDQQPQVVGYVLGRIEVNHANXXXXXXXXTALPGWSCRTQKSGRGGAMAIPPPTGHVTSLAVLPGFRRCGAASQLMDMLHERMNYHYKANKVSLHVRKSNRGAIRLYEELLGYKVAGVASSYYSDGEDAFVMEAELPEVDSQEDRQLLWKGVQALHGP 240          
BLAST of mRNA_E-siliculosus-1a_F_contig1446.2608.1 vs. uniprot
Match: A0A7S2HE16_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HE16_9STRA)

HSP 1 Score: 174 bits (441), Expect = 6.060e-46
Identity = 98/224 (43.75%), Postives = 130/224 (58.04%), Query Frame = 3
Query:  144 LFFLSALSSNAKCEDVLRPSDFDFRLARKSDIKSIRHCNLETLPENYSTDFYDTHIKDWPELALVAEHADRRRNED------QQPQVVGYVLGRIEVNNANXXXXXXTALPGWSCRTQKSGRGGAMVIPPPTGHVTSLAVLPGFRRCGAASQLMDMLHERMNYHYKANKVSLHVRKSNRGAIRLYEELLGYKVAGVASSYYSDGEDAFVMEAELPEVDSQPADN 797
            L FL+ L +N +C   L   +   RLARK DI  I+ CNL+TLPENY+  FY  H+ +WP +ALVAE      +        ++ +VVGYVLGR+E                    T K+G    M      GH+TSLAV+P FRR G A Q+M+ +H +M  HY A+K SLHVR +N GA+RLY+  LGY+   V  +YYSDGEDAF+M A L  V++Q  +N
Sbjct:   14 LLFLTLLRANVRCS--LNAENICIRLARKDDIPGIQRCNLKTLPENYAISFYSQHLSNWPHIALVAEELPAPPSPGTTLLYPRKGEVVGYVLGRMETG------------------TSKAGLVNRMTR---HGHITSLAVMPDFRRLGLAQQMMEKVHSQMRLHYSADKSSLHVRITNEGAVRLYQNSLGYETMQVIGNYYSDGEDAFLMTASLANVETQTEEN 214          
BLAST of mRNA_E-siliculosus-1a_F_contig1446.2608.1 vs. uniprot
Match: B8CB65_THAPS (N-acetyltransferase domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CB65_THAPS)

HSP 1 Score: 141 bits (356), Expect = 1.760e-35
Identity = 82/185 (44.32%), Postives = 98/185 (52.97%), Query Frame = 3
Query:  213 FRLARKSDIKSIRHCNLETLPENYSTDFYDTHIKDWPELALVAEHADRRRNEDQQPQVVGYVLGRIEVNNANXXXXXXTALPGWSCRTQKSGRGGAMVIPPPTGHVTSLAVLPGFRRCGAASQLMDMLHERMNYHYKANKVSLHVRKSNRGAIRLYEELLGYKVAGVASSYYSDGEDAFVMEAEL 767
            FRLARKSDI  I+  NL TLPENY+ +FY  H+++WPEL LVAEH            +VGYVLG++E                                  P GHVTSLAV    RR G AS L+  LH  +N  Y AN V LHVR SN  A++LY E LGY VA +   YY DGEDA+ M  + 
Sbjct:    3 FRLARKSDIPQIQKVNLATLPENYNNNFYINHMREWPELCLVAEH------------IVGYVLGKVETR--------------------------------PLGHVTSLAVHSHARRLGIASSLLHQLHFHLNSCYNANSVGLHVRISNSAAVKLYIEHLGYDVADIIPMYYGDGEDAYFMRKDF 143          
BLAST of mRNA_E-siliculosus-1a_F_contig1446.2608.1 vs. uniprot
Match: A0A0C3AMU4_9AGAM (N-acetyltransferase domain-containing protein n=2 Tax=Serendipita TaxID=358905 RepID=A0A0C3AMU4_9AGAM)

HSP 1 Score: 134 bits (337), Expect = 1.250e-32
Identity = 73/188 (38.83%), Postives = 102/188 (54.26%), Query Frame = 3
Query:  210 DFRLARKSDIKSIRHCNLETLPENYSTDFYDTHIKDWPELALVAEHADRRRNEDQQPQVVGYVLGRIEVNNANXXXXXXTALPGWSCRTQKSGRGGAMVIPPPTGHVTSLAVLPGFRRCGAASQLMDMLHERMNYHYKANKVSLHVRKSNRGAIRLYEELLGYKVAGVASSYYSDGEDAFVMEAELPE 773
            D RLA+  D+  ++ CNL+ LPENY   +Y  HI  WP+L+ VA         D + ++VGY+L +++ +                               PP GHVTS++VL G+RR G A +LM +  + M+  Y+A  VSLHVRKSNR AI LY + LG+ V  +   YY+DGEDAF M  + PE
Sbjct:    2 DIRLAQPDDLLGMQACNLQNLPENYQMRYYLYHILSWPQLSYVAR--------DHKGRIVGYILAKMDEDQEQ----------------------------PPHGHVTSISVLRGYRRLGVAKRLMVLSQQAMSEVYRAEYVSLHVRKSNRAAIGLYRDTLGFSVHQIEKGYYADGEDAFAMRLDFPE 153          
BLAST of mRNA_E-siliculosus-1a_F_contig1446.2608.1 vs. uniprot
Match: A0A7S1G113_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1G113_9STRA)

HSP 1 Score: 137 bits (345), Expect = 4.950e-32
Identity = 83/220 (37.73%), Postives = 112/220 (50.91%), Query Frame = 3
Query:  216 RLARKSDIKSIRHCNLETLPENYSTDFYDTHIKDWPELALVAEHAD-------------RRRNEDQQP-----------------QVVGYVLGRIEVNNANXXXXXXTALPGWSCRTQKSGRGGAMVIPPPTGHVTSLAVLPGFRRCGAASQLMDMLHERMNYHYKANKVSLHVRKSNRGAIRLYEELLGYKVAGVASSYYSDGEDAFVMEAELPEVDSQ 785
            R+AR++D++ I+ CNL  LPENY T FY  H++DWPELALVAE                +  + D  P                 +++GYVLG++    A                    GR G +      GHVTSLA++  FRR G A +LM  LH  M   + A+ V LHVR SN  A +LY E +GY+VAGV   YY DGEDA++M  +L + + Q
Sbjct:   36 RVARRTDVQGIQSCNLANLPENYHTAFYVNHLRDWPELALVAERITSPTAASSSNHMMTKTASRDSPPATIPVHSSDEPSNVGNTEIIGYVLGKVREEEAE-------------------GRPGHVER---IGHVTSLAIMSDFRRQGLAGELMRQLHYNMQRSHSADGVGLHVRVSNVAATQLYSESMGYRVAGVIKGYYQDGEDAYLMRKDLLKTEQQ 233          
BLAST of mRNA_E-siliculosus-1a_F_contig1446.2608.1 vs. uniprot
Match: A0A0C3L0B0_9AGAM (N-acetyltransferase domain-containing protein n=1 Tax=Tulasnella calospora MUT 4182 TaxID=1051891 RepID=A0A0C3L0B0_9AGAM)

HSP 1 Score: 131 bits (330), Expect = 8.360e-32
Identity = 77/188 (40.96%), Postives = 101/188 (53.72%), Query Frame = 3
Query:  210 DFRLARKSDIKSIRHCNLETLPENYSTDFYDTHIKDWPELALVAEHADRRRNEDQQPQVVGYVLGRIEVNNANXXXXXXTALPGWSCRTQKSGRGGAMVIPPPTGHVTSLAVLPGFRRCGAASQLMDMLHERMNYHYKANKVSLHVRKSNRGAIRLYEELLGYKVAGVASSYYSDGEDAFVMEAELPE 773
            + RLA   D+  ++ CNL+ LPENY+  +Y  H   WP L+ VAE        D + +VVGY+L ++E + A                             PP GHVTS++VL  +RR G A +LM +  E M   YKA  VSLHVRKSNR AI LY + LG++V GV + YY+DGEDA  M   L E
Sbjct:    2 NIRLATAGDLLGMQACNLQNLPENYTLRYYLYHAMTWPSLSYVAE--------DSKGRVVGYILAKMEEDAAEKNE-------------------------PPHGHVTSISVLRSYRRLGLAKKLMLLSQEAMATIYKAEYVSLHVRKSNRAAIGLYRDTLGFEVHGVEAKYYADGEDALAMRLSLKE 156          
BLAST of mRNA_E-siliculosus-1a_F_contig1446.2608.1 vs. uniprot
Match: A0A836CFW2_9STRA (Acyl-CoA N-acyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFW2_9STRA)

HSP 1 Score: 129 bits (325), Expect = 1.300e-30
Identity = 76/183 (41.53%), Postives = 106/183 (57.92%), Query Frame = 3
Query:  189 VLRPSDFDFRLARKSDIKSIRHCNLETLPENYSTDFYDTHIKDWPELALVAEHADRRRNEDQQPQVVGYVLGRIEVNNANXXXXXXTALPGWSCRTQKSGRGGAMVIPPPTGHVTSLAVLPGFRRCGAASQLMDMLHERMNYHYKANKVSLHVRKSNRGAIRLYEELLGYKVAGVASSYYSDG 737
            +++ S+   RLAR +D+ SIR+ NL TLPENY+ DFYD  +  +P+L+LVAE +    +ED +  VVGYVLG+ +              P W+      G  G        GH+TSLAV P +RR G A +L+  LHER+   + +   SLHVR+SN  A+RLY ++ GY VA V   YY+ G
Sbjct:    5 IVKSSNITVRLARSNDVASIRNINLRTLPENYTKDFYDNQLFQYPKLSLVAESSP---DEDGRSMVVGYVLGQTK-----------GLQPTWA-----GGSRGPFAAK--EGHITSLAVAPEYRRQGIAMRLIAALHERLEGEHGSRDCSLHVRRSNASAVRLYRDVFGYGVASVERGYYTAG 166          
BLAST of mRNA_E-siliculosus-1a_F_contig1446.2608.1 vs. uniprot
Match: A0A8H6SDY9_9AGAR (N-acetyltransferase domain-containing protein n=1 Tax=Mycena indigotica TaxID=2126181 RepID=A0A8H6SDY9_9AGAR)

HSP 1 Score: 130 bits (326), Expect = 1.410e-30
Identity = 90/237 (37.97%), Postives = 122/237 (51.48%), Query Frame = 3
Query:   78 DAILSFLSA-------ARVPSMIIRENARLFFLSALSSNAKCEDVLRPSDFDFRLARKSDIKSIRHCNLETLPENYSTDFYDTHIKDWPELALVAEHADRRRNEDQQPQVVGYVLGRIEVNNANXXXXXXTALPGWSCRTQKSGRGGAMVIPPPTGHVTSLAVLPGFRRCGAASQLMDMLHERMNYHYKANKVSLHVRKSNRGAIRLYEELLGYKVAGVASSYYSDGEDAFVMEAEL 767
            DA+ SFLS+       AR P+  +   A LF +S                   RLA+  D+ +I+  NL+ LPENYS  F+  H   WP+++ VAE        DQ+ ++VGYVL +IE    +            S    ++  G    I    GHV S++VL  +RR G A +LM +  E M   YKAN VSLHVR+SN+ AI LY+  LG+KVA V + YY DGEDA  M  +L
Sbjct:   11 DAVPSFLSSRHPQKPSARCPAGQLHTPAELFTMS------------------IRLAKPDDLLAIQAANLQNLPENYSMKFWIYHAMTWPQISFVAE--------DQKGRIVGYVLAKIEEAEEDE-----------SGNKPQNDNGKPAEI---HGHVNSISVLRAYRRLGLAKKLMLLSQEAMATVYKANYVSLHVRRSNKAAIALYQGALGFKVAKVEAKYYGDGEDALSMRLDL 207          
BLAST of mRNA_E-siliculosus-1a_F_contig1446.2608.1 vs. uniprot
Match: A0A8H6IE04_9AGAR (Acyl-CoA N-acyltransferase n=1 Tax=Tulosesus angulatus TaxID=980116 RepID=A0A8H6IE04_9AGAR)

HSP 1 Score: 128 bits (322), Expect = 1.600e-30
Identity = 75/186 (40.32%), Postives = 103/186 (55.38%), Query Frame = 3
Query:  210 DFRLARKSDIKSIRHCNLETLPENYSTDFYDTHIKDWPELALVAEHADRRRNEDQQPQVVGYVLGRIEVNNANXXXXXXTALPGWSCRTQKSGRGGAMVIPPPTGHVTSLAVLPGFRRCGAASQLMDMLHERMNYHYKANKVSLHVRKSNRGAIRLYEELLGYKVAGVASSYYSDGEDAFVMEAEL 767
            + RLAR  D+  ++ CNL+ LPENY+  +Y  H   WP L+ VAE        DQ+ ++VGY+L +I+                     +++  G A     P GHVTS++VL  +RR G A +LM    E M   YKA+ VSLHVRKSNR A+ LY + LG+ V  +   YY+DGEDA+ ME  L
Sbjct:    2 NIRLARPDDLAGMQACNLQNLPENYTMRYYLYHAMTWPGLSFVAE--------DQKGRIVGYILAKID---------------------EEAKEGEA-----PHGHVTSISVLRSYRRLGIAKKLMLQSQEAMAAIYKASFVSLHVRKSNRAALSLYRDTLGFTVKDIEKGYYADGEDAYAMELSL 153          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1446.2608.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KNJ0_9PHAE6.730e-17387.04N-acetyltransferase domain-containing protein n=1 ... [more]
D7FT09_ECTSI1.400e-14093.33N-acetyltransferase domain-containing protein n=1 ... [more]
A0A7S2HE16_9STRA6.060e-4643.75Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
B8CB65_THAPS1.760e-3544.32N-acetyltransferase domain-containing protein (Fra... [more]
A0A0C3AMU4_9AGAM1.250e-3238.83N-acetyltransferase domain-containing protein n=2 ... [more]
A0A7S1G113_9STRA4.950e-3237.73Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
A0A0C3L0B0_9AGAM8.360e-3240.96N-acetyltransferase domain-containing protein n=1 ... [more]
A0A836CFW2_9STRA1.300e-3041.53Acyl-CoA N-acyltransferase n=1 Tax=Tribonema minus... [more]
A0A8H6SDY9_9AGAR1.410e-3037.97N-acetyltransferase domain-containing protein n=1 ... [more]
A0A8H6IE04_9AGAR1.600e-3040.32Acyl-CoA N-acyltransferase n=1 Tax=Tulosesus angul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1446contigE-siliculosus-1a_F_contig1446:19993..26084 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size1230
Model size2636
Exons6
Ec32 orthologEc-24_004370.1
Ec32 ortholog descriptionAcetyltransferase (GNAT) domain protein
Hectar predicted targeting categoryother localisation
BRITEko00000,ko01000,ko03036,ko04131
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.J
EC2.3.1.255,2.3.1.256
EggNOG OGsCOG0456@1,KOG3235@2759
EggNOG free text desc.N-terminal peptidyl-glutamic acid acetylation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005783,GO:0005829,GO:0012505,GO:0031974,GO:0031981,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0048471,GO:0070013
KEGG koko:K00670,ko:K20791
Preferred namenaa10
Seed eggNOG ortholog2880.D7FT09
Seed ortholog evalue2.3e-117
Seed ortholog score429.1
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1446.2608.1prot_E-siliculosus-1a_F_contig1446.2608.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1446 20112..24797 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927956.126995-UTR-E-siliculosus-1a_F_contig1446:19992..201111622927956.126995-UTR-E-siliculosus-1a_F_contig1446:19992..20111Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1446 19993..20111 +
1696318752.586278-UTR-E-siliculosus-1a_F_contig1446:19992..201111696318752.586278-UTR-E-siliculosus-1a_F_contig1446:19992..20111Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1446 19993..20111 +
1622927956.2270966-UTR-E-siliculosus-1a_F_contig1446:24797..260841622927956.2270966-UTR-E-siliculosus-1a_F_contig1446:24797..26084Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1446 24798..26084 +
1696318752.6588254-UTR-E-siliculosus-1a_F_contig1446:24797..260841696318752.6588254-UTR-E-siliculosus-1a_F_contig1446:24797..26084Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1446 24798..26084 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927956.142942-CDS-E-siliculosus-1a_F_contig1446:20111..201141622927956.142942-CDS-E-siliculosus-1a_F_contig1446:20111..20114Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1446 20112..20114 +
1696318752.5999076-CDS-E-siliculosus-1a_F_contig1446:20111..201141696318752.5999076-CDS-E-siliculosus-1a_F_contig1446:20111..20114Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1446 20112..20114 +
1622927956.157117-CDS-E-siliculosus-1a_F_contig1446:21334..215051622927956.157117-CDS-E-siliculosus-1a_F_contig1446:21334..21505Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1446 21335..21505 +
1696318752.6079032-CDS-E-siliculosus-1a_F_contig1446:21334..215051696318752.6079032-CDS-E-siliculosus-1a_F_contig1446:21334..21505Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1446 21335..21505 +
1622927956.1732635-CDS-E-siliculosus-1a_F_contig1446:21965..220371622927956.1732635-CDS-E-siliculosus-1a_F_contig1446:21965..22037Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1446 21966..22037 +
1696318752.6182408-CDS-E-siliculosus-1a_F_contig1446:21965..220371696318752.6182408-CDS-E-siliculosus-1a_F_contig1446:21965..22037Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1446 21966..22037 +
1622927956.1921148-CDS-E-siliculosus-1a_F_contig1446:22686..229261622927956.1921148-CDS-E-siliculosus-1a_F_contig1446:22686..22926Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1446 22687..22926 +
1696318752.6299646-CDS-E-siliculosus-1a_F_contig1446:22686..229261696318752.6299646-CDS-E-siliculosus-1a_F_contig1446:22686..22926Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1446 22687..22926 +
1622927956.2043757-CDS-E-siliculosus-1a_F_contig1446:23585..237651622927956.2043757-CDS-E-siliculosus-1a_F_contig1446:23585..23765Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1446 23586..23765 +
1696318752.6412063-CDS-E-siliculosus-1a_F_contig1446:23585..237651696318752.6412063-CDS-E-siliculosus-1a_F_contig1446:23585..23765Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1446 23586..23765 +
1622927956.2167313-CDS-E-siliculosus-1a_F_contig1446:24233..247971622927956.2167313-CDS-E-siliculosus-1a_F_contig1446:24233..24797Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1446 24234..24797 +
1696318752.6500552-CDS-E-siliculosus-1a_F_contig1446:24233..247971696318752.6500552-CDS-E-siliculosus-1a_F_contig1446:24233..24797Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1446 24234..24797 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1446.2608.1

>prot_E-siliculosus-1a_F_contig1446.2608.1 ID=prot_E-siliculosus-1a_F_contig1446.2608.1|Name=mRNA_E-siliculosus-1a_F_contig1446.2608.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=410bp
MIIRENARLFFLSALSSNAKCEDVLRPSDFDFRLARKSDIKSIRHCNLET
LPENYSTDFYDTHIKDWPELALVAEHADRRRNEDQQPQVVGYVLGRIEVN
NANANTNTNTALPGWSCRTQKSGRGGAMVIPPPTGHVTSLAVLPGFRRCG
AASQLMDMLHERMNYHYKANKVSLHVRKSNRGAIRLYEELLGYKVAGVAS
SYYSDGEDAFVMEAELPEVDSQPADNIRGASALALPRSLDGTSTTVRSTS
GRESAGFVTTAAANSSSSSSGSSGSSKGGLVTAASTSGAGADNHRVYSRN
NVGFVTAAAAAAAAAVSSSATAPPPPQPPAAAATAPPTAAAAVPPTAAAA
AAPPLVLQAVVSTPRTPGGGDGGGSRNCGLGRRGYGTMSSSRGVQHPCGD
SGGGAAATA*
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mRNA from alignment at E-siliculosus-1a_F_contig1446:19993..26084+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1446.2608.1 ID=mRNA_E-siliculosus-1a_F_contig1446.2608.1|Name=mRNA_E-siliculosus-1a_F_contig1446.2608.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=6092bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1446:19993..26084+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CACAGCCCCTTCGAAGGAGACTCGGCGACGTGCCAGGATTGAGACACGCT CGCCCGCCCCCGGCGGATAGACTGTTGGACGCCATTCTCTCGTTTTTGAG TGCTGCAAGAGTTCCTAGCATGGTAAGTGGTTGACGGAATATGGGGTGTC GGGAGGGGCGGAGATGAGACGTATACGCGCGTGCAGCACACATGCTTGAC GCCTTGTGTGCTAGCGCTGTTCCTTTGCGTTGGAGGGAGGTACATCAATC GCTTCCATTGGATCCTCGAGCGTGATGGAGGTTTTGTACTCTCGCATGCT CCTGTCGCACATAAGTGGGATTGCTTGTGAGCGCGATCAACAATCAAGCA CACCAATTTTCAAAACACATTTGCTTGCGAACAGCAGTAACGCACTGTCG ATGCCACACCCACTTGACCGATACCAAAGGCTCGATTACGGCTCGATTAC GCTCGCGGCGAGGAGGATTCCACTTTCAAACGAAACGTTTTCATCTGGCG GTCGACAAGACCAGTACACCACTGCCATTTTTGCGACAAATACTGATATT TGGCTCCATTTCGAGGCATAGGCAATGTACCGAGGGGGGTGGTATATTAC GCAATATGACACACACAACGTGCTGCCCTGCTTGGTCTCTTGCATAATTA TAGACATCAGTAGAGTTTCCTCGGCTGTGGTGCCGTTGGCGACTGCTAGT GCTGGCCTATGGGATTTTGCAAAGTGTTGGAGACAAATCAACAGTACTTG TACGTAGGCGACAACAGGAATTCTCCGCAGCCACCCGGCTTGCTACATAC GGTACGAATATCGTAGTTGTGTTCTCGGACGTGCAATTGAGGGCAACACT TCCGAGCGGGGTAAACTCGAAACCATTTCCAGCTGATCCGTTTGCTGTGC CCGCGTATGTGCATCACAGCAGCTTCCCCAGCGTATCGAAACTAGGTATG ATAGCAGACGTCCATTTATAATCGTTCCCACGAACTGGCCGCCGCAAACC TGATGCGGATACCAATGGTATTAGCAGCAGCGACAGGTTACGTAAAACAG CCGGTTCGCGCGAAACAATTGCAGCGTTTCGCCCTCCCTCCCTGTCGGTC CTATCTCCACCAAGACAGCAGCGCTTTCTTTGCTTGGTTGCCCTCCATTC GACATCCGACAATCCTCGGTTGGACGGCCCACAAGCCTCTGTTTGACGTT CCGCAAAACCTGCGTGGGACGTTCCACAAACCGGTGTTGGCCAAATCCAC AACACACCCCGGGCAACGTGCAGTGACTACAATATCGTGATCGTGATGCC GTCCGTCAAACTAAATCGCCTCATCCTCTGCCGCCGCCGCAGATAATTCG AGAAAATGCGAGGCTGTTCTTCTTGTCCGCCCTGAGCTCGAACGCCAAGT GCGAAGACGTTCTTCGACCGTCGGACTTCGACTTCCGGCTGGCGAGAAAG AGCGACATCAAGTCCATCCGGCACTGCAACCTAGAGACGCTCCCCGAGAA CTACTCCACGGATGTGAGGACTGCTGTGTAAGAGGAGCGTGGAGTGAGGA TGTCCATGTCGAGCTTGCTGTTGTTGCTTGGTTGGTGGTGTGTTTGCTGT TTTTGATGGAGGTGACTGTGGAGGCGATTGTTGTATTGCTGGCGCTTTTG GTGTTGGTAATAGTGATGGGAGAGGATAGTACTGCTGTCGGTGGTTATGG TGGTGGTGGTGATGGTGATCAGAATAGTTCTTCTGTTGGTGCTGTTGACA TTTGATGGAGATGATACTGTTGCCATCCTGAAGCAGATTTTCCTCCTCCC AGGTGTCCCGAAGTTCTGAAGTGGTCCTTCCATCGTCCTGTGCAACCTAC AGCCCACCAGCCCTACAAAACAGATCACGTACACCTCCAAGCATCCATCA AGGTTGTACACACGGCGTGAAACCTCTCGGTCCTTCTGCGGCATCCTCCC CTTGTTTGATTACTTTTTGGCAGTTCTACGACACACATATTAAGGATTGG CCGGAGCTGGCGCTGGTGGCGGAGCATGCTGACCGACGACGGAACGTGAG TTGTTTTCTGTTTTCGGTTCAAGCCGTTCGATGTACTGCTGTACGACATG ATGCTTTCGCCGTCAATCAAAAGTTTTGACGTATGTCTTGTTTTGTCGGT GTCTTGTGTTCCCGACTCAAACCGTTTGAAGCGCTGCGTCGTGATGCATG AATCCGGCCACCCTCTCAAGCTTAGTTCTGTGTTGCGGTCTCGATTCAAG CCGTTTGACGCATTCCGTCGTGGTGCATGCATTCGCCCTCCCTTTCAATA TGATTTTCATGTATTTTGTCTTGCGGTCTCGAATTGTAGCGATTTGACGC ACTGCACCATATGCATGCATCCGCCCACCCTCTCAAATTGAAACTTTGAA GCTTGATGTCTCCTATTGTCAACTCAAGCCGTTTGACGCACTACGTCAAG ATGCATGCACCGACCCTCAACATGAGACTCTGAAGTTCGGTTCTTGTGTC CTCGATATATACCGTTTGACGCATTACGCCTTGACGCCTTTGCCCACCCT CTCAAAATGAGTATCGAAGCTTGGCGTAGTGCCCCATGCCCCTTCTCTCT CTATCTACCGCTCGCTCTCTCTGCCCTCTGTTGCTGCTGTCCTTTATCTG TGTCTCAGCAAGCTCCCCTCGTTCGGTCGTTTTTCGTTTCGCAGGAGGAC CAACAGCCACAGGTTGTCGGTTATGTCCTCGGACGGATAGAGGTTAACAA CGCCAACGCCAACACCAACACCAACACGGCCCTGCCCGGATGGTCATGTA GAACTCAGAAGAGTGGCAGGGGGGGTGCGATGGTGATACCCCCGCCGACG GGGCACGTAACCTCTCTGGCAGTCTTGCCCGGCTTCCGGAGGTGCGGCGC AGCGAGCCAGCTCATGGACATGCTTCACGAGCGGGTGAGAGAGAAGGCTG CATTGCGCTTTTGCGGCGGTGGTTGTCGCGGGAAGCGATGTTTTGGTGGT TTGTTTTGGTGGGGGTGTGATCGTGTCATGATTGCGTGATCCCGGTCCTC CTAGAATTTTTTTCCATGCTCTCGTTTTGAGTAAAACCGTAGCCTCCGAT GTTCTCGGTGTCGTGGTTGCACTGCCGCCCATGTTTAGGCTAGGAGGTGA GCGAGGACGTTTTGCTGACCAAAGCTTGCCGCTGCTGCTAGATAGATTCC TGCCAATGCTTTAAGAACATAACCACCAAGCTTAGCACCACTCACCCACC GGAATACTACTGCACGCTTTGGTACTATTTTAGATCAACACAATCGGCTG TCACCATCATCTTCCCGGTACGTTTTTTTGAGTTTTTTCGACTCTTGAAG ATTGTCCACCCACCCTTCGAGTCCCAGCGTTTTCGAGGTTGTTTTAAGCA CTGGTTTTGCTTACAGGTGCAGACCCAGGTTCACACGAACGCTGGAATGA TTTGTCAACAAGCACACCACTTGATGTGTTGTATGCATGCCCGTCATTGT CGCTTGTATTCAGCGTTAAGGCTAAGCTCAACCTTTTCCCTATCACATAC GTTTCCAACACATGCACGTTTGGATTGAAACCAAAAACGACAGATGAACT ACCACTACAAAGCCAACAAGGTCTCGCTGCACGTGAGAAAATCGAACCGG GGGGCTATCCGTCTGTACGAAGAGCTCCTCGGCTACAAGGTCGCCGGCGT TGCCTCGTCCTACTACTCAGATGGGGAGGATGCCTTCGTGATGGAAGCTG AGCTGCCGGAAGTCGATTCCCAGGTGATTGGATGATTGCTTGTGGTGACC GTACAGCAGCACCCTTGCCGTGGGTGTTTGCGTACTGTCCTCGCGTTGCC AATTTGTTTTCAGTGCTTTGAGAACTGTTTTTGTATTTTTCTCGAGCGTT TTATTATTTCAGTCGTGTTTCACTGCTAAGAGACCTACTCAGGCGAAGTG CATCACAACAAACCCTGAATGGCATAGATAGGTGCCATCAGGTGGAGTGA GAGATGGGAACGCATGAAGTTTGCCGTAAATAGCGGCGTCGCACGTGGGT TGTTGCACGGCCATGAGGAACGAGTTGCGCGTTACATGCCAAGAGGCGGC ACTTCCGCCGCCCCTCGTTACGGTTGCCGAATCGCATCACCCCAAGGGCA ACCGACACTTGCATGTTTATCACGTTGAATCATGCTCACCCACTCGTCCA ACCTCTTGCATTTCCCATCTCACGTATCTGCATGTCTCCAGCCTGCCGAC AACATCAGGGGCGCTTCCGCGTTAGCGTTACCACGTAGCCTCGACGGTAC TAGCACCACCGTCCGCAGCACCAGCGGCCGCGAGAGCGCCGGGTTCGTCA CAACAGCAGCCGCCAACAGCAGCAGCAGCAGCAGCGGGAGCAGTGGGAGC AGCAAGGGTGGGCTTGTGACAGCGGCGAGCACCTCCGGCGCCGGCGCCGA CAATCACCGCGTGTACAGCCGCAACAACGTGGGCTTCGTCACAGCGGCAG CAGCAGCGGCAGCGGCAGCGGTCTCTAGTAGCGCAACGGCACCACCGCCA CCACAGCCACCAGCAGCAGCAGCAACAGCACCGCCAACAGCAGCAGCAGC GGTACCGCCAACAGCAGCAGCAGCAGCAGCGCCGCCCCTTGTCTTGCAGG CAGTCGTGTCTACCCCTAGGACGCCCGGCGGCGGGGACGGCGGGGGGAGC CGTAATTGCGGGCTAGGTCGGCGAGGGTACGGTACGATGTCGAGTTCCCG CGGGGTGCAGCACCCTTGCGGGGATAGCGGGGGGGGGGCTGCGGCTACTG CTTAGGCCGGGGAGAGGATGTTTTGATGCGTATTGTGGTTGCGGGAGGGG GTAGTGGACAAGGCGTAACGGGTGCTCTACGGTGCTCGCAGTCTCCGTCT TGCCTTTTTGCCAAGACGTACATCATGCGTGGGCGCAGCTATCGTGGTTT AATTCCCGGTTTGGGCTATTGACTTGTCGGGTGTTTTGGTGTCCAACAAA GCCTACAAATCTATCTCTCTTGCAGTCCAGACTGGACCACCATGGAACTG GTTGAGGATGTTTTTTCTTTCAACACGGTTTGCTTTGTTTTGTAAGTTGT TGGACGTGTGGTCTGATCTGTTTCTTCGTGGTGGAGGATTTCTCTTGACC CTGGGTATCATAGTTGTTAAGGATTGTGGACGGGGGAGTTGGAGGTTGAT TCTTGCTTCCCTTTGGGGCAACGTGGGGGTGGTTGTGTGAACCGAGTGTT TGTGTTGATGGGCAGGAAAGAAGACGTTTCGCGGCAACACACAACACAGA AAGCAATGTTGTTGTTGCTTTTTAGTCCACCGTAAGGCTTAACGATTTGT TGTTTTTCTCACAGGAGGATTGACATTTTCATAAGCAGGGAGTGCAAGCT CTCCATGGACCGAACAAGAAACATGCACACTGCTGTGGTGTTTGATGTTC TTATCCATCCCGCAGTGTCATTTCAGCCCAGGCTAGCGTTTCTTTCAACC GAGCGTTTGTTGCTTCTAATGTTGCGGAGTTTAGGAATCATTCTCATGTC CGTGGGGGCGATATCATGCAAAAAAGTTGGCGAGCAGGACGTATCCTGTA CATTTCGTTGTCTGCTTCGTGGCGGGCGGTTTTTCACTACGGTCAGGGGG GTCCATTGCCGAGAAACGAACGCGCGAGTGTCATGCCTGCCGAAGAACCT GTTTGTTCGTTTCGGCACGTTTGGTTTCCTGGGAAATTCGGGGTGCGAGA GGCAGCACAGCGCACGACCCGAGCAGCGAAAGTTCTCGGAGGGTGTTAGT TTTGTACGCGTTCGTGCTCGGCCTCTCTCTGTTTGAAGGATAGTCTATGT AGACTGCACTACATTTTTCCGTGTCCATACATACGTTTTTTTATAAACAC AGTACTCTGGTAGTTCTTATCGTTTCAGCAGCTTTCGCTTTGTGATACGT AGTTTATTGCGGGGTATTTCCACGTCGAAGGCGCCACGTGTGACATAATA GGTTGATCACTGTAAGGGATAGCTAGCAGGGGAGGGACACAAGGGGCGTG GGAGAATCGCGACGGTACACTTTTCCCCGGAGAACATACGCA
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1446:19993..26084+

>mRNA_E-siliculosus-1a_F_contig1446.2608.1 ID=mRNA_E-siliculosus-1a_F_contig1446.2608.1|Name=mRNA_E-siliculosus-1a_F_contig1446.2608.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2460bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1446:19993..26084+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGATGATAATTCGAGAAAATGCGAGGCTGTTCTTCTTGTCCGCCCTGAG
CTCGAACGCCAAGTGCGAAGACGTTCTTCGACCGTCGGACTTCGACTTCC
GGCTGGCGAGAAAGAGCGACATCAAGTCCATCCGGCACTGCAACCTAGAG
ACGCTCCCCGAGAACTACTCCACGGATATAATTCGAGAAAATGCGAGGCT
GTTCTTCTTGTCCGCCCTGAGCTCGAACGCCAAGTGCGAAGACGTTCTTC
GACCGTCGGACTTCGACTTCCGGCTGGCGAGAAAGAGCGACATCAAGTCC
ATCCGGCACTGCAACCTAGAGACGCTCCCCGAGAACTACTCCACGGATTT
CTACGACACACATATTAAGGATTGGCCGGAGCTGGCGCTGGTGGCGGAGC
ATGCTGACCGACGACGGAACTTCTACGACACACATATTAAGGATTGGCCG
GAGCTGGCGCTGGTGGCGGAGCATGCTGACCGACGACGGAACGAGGACCA
ACAGCCACAGGTTGTCGGTTATGTCCTCGGACGGATAGAGGTTAACAACG
CCAACGCCAACACCAACACCAACACGGCCCTGCCCGGATGGTCATGTAGA
ACTCAGAAGAGTGGCAGGGGGGGTGCGATGGTGATACCCCCGCCGACGGG
GCACGTAACCTCTCTGGCAGTCTTGCCCGGCTTCCGGAGGTGCGGCGCAG
CGAGCCAGCTCATGGACATGCTTCACGAGCGGGAGGACCAACAGCCACAG
GTTGTCGGTTATGTCCTCGGACGGATAGAGGTTAACAACGCCAACGCCAA
CACCAACACCAACACGGCCCTGCCCGGATGGTCATGTAGAACTCAGAAGA
GTGGCAGGGGGGGTGCGATGGTGATACCCCCGCCGACGGGGCACGTAACC
TCTCTGGCAGTCTTGCCCGGCTTCCGGAGGTGCGGCGCAGCGAGCCAGCT
CATGGACATGCTTCACGAGCGGATGAACTACCACTACAAAGCCAACAAGG
TCTCGCTGCACGTGAGAAAATCGAACCGGGGGGCTATCCGTCTGTACGAA
GAGCTCCTCGGCTACAAGGTCGCCGGCGTTGCCTCGTCCTACTACTCAGA
TGGGGAGGATGCCTTCGTGATGGAAGCTGAGCTGCCGGAAGTCGATTCCC
AGATGAACTACCACTACAAAGCCAACAAGGTCTCGCTGCACGTGAGAAAA
TCGAACCGGGGGGCTATCCGTCTGTACGAAGAGCTCCTCGGCTACAAGGT
CGCCGGCGTTGCCTCGTCCTACTACTCAGATGGGGAGGATGCCTTCGTGA
TGGAAGCTGAGCTGCCGGAAGTCGATTCCCAGCCTGCCGACAACATCAGG
GGCGCTTCCGCGTTAGCGTTACCACGTAGCCTCGACGGTACTAGCACCAC
CGTCCGCAGCACCAGCGGCCGCGAGAGCGCCGGGTTCGTCACAACAGCAG
CCGCCAACAGCAGCAGCAGCAGCAGCGGGAGCAGTGGGAGCAGCAAGGGT
GGGCTTGTGACAGCGGCGAGCACCTCCGGCGCCGGCGCCGACAATCACCG
CGTGTACAGCCGCAACAACGTGGGCTTCGTCACAGCGGCAGCAGCAGCGG
CAGCGGCAGCGGTCTCTAGTAGCGCAACGGCACCACCGCCACCACAGCCA
CCAGCAGCAGCAGCAACAGCACCGCCAACAGCAGCAGCAGCGGTACCGCC
AACAGCAGCAGCAGCAGCAGCGCCGCCCCTTGTCTTGCAGGCAGTCGTGT
CTACCCCTAGGACGCCCGGCGGCGGGGACGGCGGGGGGAGCCGTAATTGC
GGGCTAGGTCGGCGAGGGTACGGTACGATGTCGAGTTCCCGCGGGGTGCA
GCACCCTTGCGGGGATAGCGGGGGGGGGGCTGCGGCTACTGCTTAGCCTG
CCGACAACATCAGGGGCGCTTCCGCGTTAGCGTTACCACGTAGCCTCGAC
GGTACTAGCACCACCGTCCGCAGCACCAGCGGCCGCGAGAGCGCCGGGTT
CGTCACAACAGCAGCCGCCAACAGCAGCAGCAGCAGCAGCGGGAGCAGTG
GGAGCAGCAAGGGTGGGCTTGTGACAGCGGCGAGCACCTCCGGCGCCGGC
GCCGACAATCACCGCGTGTACAGCCGCAACAACGTGGGCTTCGTCACAGC
GGCAGCAGCAGCGGCAGCGGCAGCGGTCTCTAGTAGCGCAACGGCACCAC
CGCCACCACAGCCACCAGCAGCAGCAGCAACAGCACCGCCAACAGCAGCA
GCAGCGGTACCGCCAACAGCAGCAGCAGCAGCAGCGCCGCCCCTTGTCTT
GCAGGCAGTCGTGTCTACCCCTAGGACGCCCGGCGGCGGGGACGGCGGGG
GGAGCCGTAATTGCGGGCTAGGTCGGCGAGGGTACGGTACGATGTCGAGT
TCCCGCGGGGTGCAGCACCCTTGCGGGGATAGCGGGGGGGGGGCTGCGGC
TACTGCTTAG
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