mRNA_E-siliculosus-1a_F_contig1444.2596.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
|
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1444.2596.1 vs. uniprot
Match: D7FM58_ECTSI (Adenine DNA glycosylase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FM58_ECTSI) HSP 1 Score: 921 bits (2380), Expect = 0.000e+0 Identity = 497/586 (84.81%), Postives = 504/586 (86.01%), Query Frame = 1
Query: 1 RTSTLAASAAPGAATGRKGKTSIAAKEENPAQPRLTAFFGSKPKQQQQGQHPIEVAASSNSSGGGARKMRSTGITSESKFGLKQQRQQEGNDVLSLAVEEEQPSLLKRIPMSAYGTWVSEVMLQQTRVETVIDYYVKWMTLFPTPNDLAAANLEQVNKAWAGLGYYRRAKMLHEGAKKVVSDHSGCLPGTAKELKDLPGIGPYTAGAVASIAFGECEPLVDGNVIRVLARLRAVASDPKNAGLNKLCWDLAGSIVDPGRPGDFNQALMELGATVCTVKNPSCSACPVRTSCFAEKLTSAGSKGPKHAASSTRGTVFAAGNSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGEDGMAVVPTAVTDFPRKAAKTLVKDQALSVSVVERDGPAGPQVLLVKRPETGLLAGQWECPCVMLRDGSEPRSSDAGNRARGTVVPSSDVPEKERLRLVDAFLFCDLRLSETLVRSRASVGTATHVFSHLRHTMQVERIEIASDPGMDNNIGTTSSRENRWVDVSDMGGVGITTGMKKVLALASKARTSSS----GAKKATKRDGKRKLDEEPNKRTTKQTKGATK 1746
RTST AASAAPGAATGRKGKTS +AKEENPAQPRLTAFFGSKPKQQQQGQHP EVA RK RSTGI SES+ GLKQQRQQEGNDVLSLAVEEEQPSLLKRIPMSAYGTWVSEVMLQQTRVETVIDYYVKWMTLFPTPNDLAAA+LEQVNKAWAGLGYYRRAKMLHEGAKKVVSDHSGCLPGTAKELKDLPGIGPYTAGAVASIAFGECEPLVDGNVIRVLARLRA+ASDPKNAGLNKLCWDLAGSIVDPGRPGDFNQALMELGATVCTVKNPSCSACPVRTSCFA+KLTSAGSKGPKHA VGEDGMAVVPTAVTDFPRKAAKTLVKDQALSVSVVERDGPAGPQVLLVKRPETGLLAGQWECPCVMLRDGSEPRSSDAGNRARGTVVPSSDVPEKERLRLVDAFLFCDL LSETLVRSRASVGTATHVFSHLRHTMQVERIEIASDPGMD+ GTTSSRENRWVDVSDMGGVGITTGMKKVLALASKAR SSS GAKK RKLDEEPN+RTTKQTKGATK
Sbjct: 75 RTSTPAASAAPGAATGRKGKTSKSAKEENPAQPRLTAFFGSKPKQQQQGQHPTEVA----------RKRRSTGIASESELGLKQQRQQEGNDVLSLAVEEEQPSLLKRIPMSAYGTWVSEVMLQQTRVETVIDYYVKWMTLFPTPNDLAAASLEQVNKAWAGLGYYRRAKMLHEGAKKVVSDHSGCLPGTAKELKDLPGIGPYTAGAVASIAFGECEPLVDGNVIRVLARLRAIASDPKNAGLNKLCWDLAGSIVDPGRPGDFNQALMELGATVCTVKNPSCSACPVRTSCFAKKLTSAGSKGPKHA---------------------------------------------------VGEDGMAVVPTAVTDFPRKAAKTLVKDQALSVSVVERDGPAGPQVLLVKRPETGLLAGQWECPCVMLRDGSEPRSSDAGNRARGTVVPSSDVPEKERLRLVDAFLFCDLGLSETLVRSRASVGTATHVFSHLRHTMQVERIEIASDPGMDDKFGTTSSRENRWVDVSDMGGVGITTGMKKVLALASKARASSSRSTSGAKKXXXXXXXRKLDEEPNQRTTKQTKGATK 599
BLAST of mRNA_E-siliculosus-1a_F_contig1444.2596.1 vs. uniprot
Match: A0A067BVX9_SAPPC (Adenine DNA glycosylase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BVX9_SAPPC) HSP 1 Score: 310 bits (793), Expect = 3.350e-94 Identity = 174/447 (38.93%), Postives = 237/447 (53.02%), Query Frame = 1
Query: 292 VEEEQPSLLKRIPMSAYGTWVSEVMLQQTRVETVIDYYVKWMTLFPTPNDLAAANLEQVNKAWAGLGYYRRAKMLHEGAKKVVSDHSGCLPGTAKELKDLPGIGPYTAGAVASIAFGECEPLVDGNVIRVLARLRAVASDPKNAGLNKLCWDLAGSIVDPGRPGDFNQALMELGATVCTVKNPSCSACPVRTSCFAEKLTSAGSKGPKHAASSTRGTVFAAGNSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGEDGMAVVPTAVTDFPRKAAKTLVKDQALSVSVVERDGPAGP-QVLLVKRPETGLLAGQWECPCVMLRDGSEPRSSDAGNRARGTVVPSSDVPEK-ERLRLVDAFLFCDLRLSETLVRSRASVGTATHVFSHLRHTMQVERIEIASDPGMDNNIGTTSSRENRWVDVSDMGGVGITTGMKKVLAL 1626
VE+ P +P+S YGTWVSE+M QQTRVETV+DYYV+WM FPT + LAAA +QVN AWAGLGYYRRA+MLH+GAK VV ++G +P + LK +PGIGPYTAGA+AS+AF PLVDGNVIRV++RLRA+ +DPK+ L CW+ +++D RPGDFNQALMELGA +C+++NPSC +CPV+ C+ A + VT +P K K +++AL++ V+ + G L+ KRPE GLLAGQWE P + A V+P+ +K +L D F ++ + SRA G H+FSH++H M VE +++ + + T S W+ S + G+TTGMKKV+ L
Sbjct: 43 VEDRAPGYAASVPVSPYGTWVSEIMCQQTRVETVVDYYVRWMEKFPTVHALAAAEPDQVNAAWAGLGYYRRARMLHDGAKFVVETYNGDMPNDIERLKAIPGIGPYTAGAIASVAFNVPAPLVDGNVIRVVSRLRAIGADPKHKPLLDHCWESGQTLIDADRPGDFNQALMELGARLCSIQNPSCESCPVQAQCY------------------------------------------------------------------------AYTESQVTQYPLKTRKKAPRNEALNILVLTTELTDGEIAYLMTKRPEGGLLAGQWEFPAFKM--------------ANDDVIPAYKARQKVSNDQLCDLFGLSTMKAIVPYIESRADKGDLVHIFSHVKHHMGVEHVQLTPNEA----LATLFSPAYAWMTPSKLAEAGVTTGMKKVMQL 399
BLAST of mRNA_E-siliculosus-1a_F_contig1444.2596.1 vs. uniprot
Match: W4GCU1_9STRA (Adenine DNA glycosylase n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GCU1_9STRA) HSP 1 Score: 309 bits (792), Expect = 1.690e-93 Identity = 183/441 (41.50%), Postives = 242/441 (54.88%), Query Frame = 1
Query: 331 MSAYGTWVSEVMLQQTRVETVIDYYVKWMTLFPTPNDLAAANLEQVNKAWAGLGYYRRAKMLHEGAKKVVSDHSGCLPGTAKELKDLPGIGPYTAGAVASIAFGECEPLVDGNVIRVLARLRAVASDPKNAGLNKLCWDLAGSIVDPGRPGDFNQALMELGATVCTVKNPSCSACPVRTSCFAEKLTSAGSKGPKHAASSTRGTVFAAGNSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGEDGMAVVPTAVTDFPRKAAKTLVKDQALSVSVVERDGPAGPQV-----LLVKRPETGLLAGQWECPCVMLRDGSE-PRSSDAGNRARGTVVPSSDVPEKERLRLVDAFLFCDLRLSETLVRSRASVGTATHVFSHLRHTMQVERIEIASDPGMDNNIGTTSSRENRWVDVSDMGGVGITTGMKKVLALASK 1635
++ Y TWVSE+M QQTRV+TV+ YY KWM FPT LA A+ +QVN WAGLGYYRRA+MLH+GA+ V+ +G +P LK +PGIGPYTAGA+AS+AFG+ EPLVDGNVIRV++RLRA++ DP + L K CW+ ++D RPGDFNQALMELGATVC+++ PSC++CPVR C A T K+ SS + TV D VV AVT FP K K +D+ ++V+VV P G V L+ KR + GLLAGQWE + + P S A+ + + +VP + E L+ R +G HVFSH++H M VE +++A G + +++ R W+ DM VGITTGMKKVLAL +K
Sbjct: 56 VTPYATWVSEIMCQQTRVDTVVTYYTKWMDTFPTIQSLANADPDQVNAVWAGLGYYRRARMLHQGAQFVMEKFNGDMPRDVDSLKTIPGIGPYTAGAIASVAFGQVEPLVDGNVIRVVSRLRAISGDPNHKPLTKHCWESGTKLIDAARPGDFNQALMELGATVCSIQTPSCASCPVRDFCHALAQT-------KNEDSSKQSTV-----------------------------------ADCSICDLTRLDEWGVVGGAVTRFPLKTRKKAPRDEVVNVAVVYHQ-PVGETVDSRRFLMFKRAQAGLLAGQWEFLTFQVEESDTIPDYSSRMVWAKADISNALNVPPDQL---------------EALIVHRQDLGELVHVFSHVKHHMGVEEVQVALPDGASVPVESSTMR---WMTCDDMAEVGITTGMKKVLALVTK 435
BLAST of mRNA_E-siliculosus-1a_F_contig1444.2596.1 vs. uniprot
Match: A0A1V9ZNM1_9STRA (Adenine DNA glycosylase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZNM1_9STRA) HSP 1 Score: 305 bits (781), Expect = 4.900e-92 Identity = 181/436 (41.51%), Postives = 244/436 (55.96%), Query Frame = 1
Query: 331 MSAYGTWVSEVMLQQTRVETVIDYYVKWMTLFPTPNDLAAANLEQVNKAWAGLGYYRRAKMLHEGAKKVVSDHSGCLPGTAKELKDLPGIGPYTAGAVASIAFGECEPLVDGNVIRVLARLRAVASDPKNAGLNKLCWDLAGSIVDPGRPGDFNQALMELGATVCTVKNPSCSACPVRTSC--FAEKLTSAGSKGPKHAASSTRGTVFAAGNSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGEDGMAVVPTAVTDFPRKAAKTLVKDQALSVSVVERDGPAGPQV-LLVKRPETGLLAGQWECPCVMLRDGSEPRSSDAGNRARGTVVPS-SDVPEKERLRLVDAFLFCDLRLSETLVRSRASVGTATHVFSHLRHTMQVERIEIASDPGMDNNIGTTSSRENRWVDVSDMGGVGITTGMKKVLAL 1626
+S Y TWVSE+M QQTRVETV++YYVKWM FPT LAAA+ EQVN AWAGLGYYRRA+MLHEGAK VV +G +P + LK +PGIGPYTAGA+AS+AF PLVDGNVIRV+ARLRA+ +DPK+ L CW+ +++D +PGDFNQA+MELGAT+C+++NPSC CPV+ C +AE +KG + T + + E G+A VT +P K K +++ L+V V+ + G L+ KRPE GLLAGQWE P + D E +P+ S E ++L+ F ++ E+ ++SR G H+FSH++H M +E I++ +D+ TT S W+ D+ G+TTGMKKVL L
Sbjct: 54 VSPYATWVSEIMCQQTRVETVVEYYVKWMEKFPTVEALAAADPEQVNAAWAGLGYYRRARMLHEGAKFVVEKLNGKMPQDVETLKTIPGIGPYTAGAIASVAFNVPAPLVDGNVIRVVARLRAIGADPKHKPLLDHCWESGETLIDKNQPGDFNQAIMELGATLCSIQNPSCMTCPVQDYCHAYAESQLPL-NKGERPKVDCTMCDL-----------------------------------------TRLEEWGLA--GGEVTQYPLKTRKKAPRNETLNVLVLTKINSDGQMAHLMTKRPEGGLLAGQWEFPVAKISDDGE--------------IPNYSKRKEYSDVQLLSLFDLTSMKAIESYLKSRQDKGELIHIFSHVKHHMGIEHIQLDESSKLDSIFPTTYS----WLTQEDLTKSGLTTGMKKVLGL 427
BLAST of mRNA_E-siliculosus-1a_F_contig1444.2596.1 vs. uniprot
Match: A0A1V9ZA94_9STRA (Adenine DNA glycosylase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZA94_9STRA) HSP 1 Score: 300 bits (767), Expect = 8.800e-90 Identity = 182/464 (39.22%), Postives = 240/464 (51.72%), Query Frame = 1
Query: 295 EEEQPSLLKRIPMSAYGTWVSEVMLQQTRVETVIDYYVKWMTLFPTPNDLAAANLEQVNKAWAGLGYYRRAKMLHEGAKKVVSDHSGCLPGTAKELKDLPGIGPYTAGAVASIAFGECEPLVDGNVIRVLARLRAVASDPKNAGLNKLCWDLAGSIVDPGRPGDFNQALMELGATVCTVK--------------NPSCSACPVRTSCFAEKLTSAGSKGPKHAASSTRGTVFAAGNSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGEDGMAVVPTAVTDFPRKAAKTLVKDQALSVSVVERDGPAGPQV-LLVKRPETGLLAGQWECPCVMLRDGSEPRSSDAGNRARGTVVPSSDVPEKERLRLVDAFLFCDLRLSETLVRSRASVGTATHVFSHLRHTMQVERIEIASDPGMDNNIGTTSSRENRWVDVSDMGGVGITTGMKKVLALASKAR 1641
EE+ P + +S YGTWVSE+M QQTRVETV+DYYV+WM FPT + LAAA EQVN AWAGLGYYRRA+MLH+GAK VV + G +P LK +PGIGPYTAGA+AS+AFG PLVDGNVIRV++RLRAV +DPK+ L CW+ +++DP RPGDFNQALMELGA +C+++ NPSC CPV+ C A ++ K S + + S + + VT +P K K +++AL++ V+ D G L+ KRPE GLLAGQWE P + D E S A T +L+ F ++ E ++SR G H+FSH++H M VE + + P D W+ + + GITTGMKKV+ L K +
Sbjct: 44 EEKGPDYVASATVSPYGTWVSEIMCQQTRVETVVDYYVRWMEKFPTVHALAAAEPEQVNAAWAGLGYYRRARMLHDGAKYVVETYDGEMPNDIDRLKAIPGIGPYTAGAIASVAFGVPAPLVDGNVIRVVSRLRAVGADPKHKPLIDHCWESGAALIDPKRPGDFNQALMELGARLCSIQACMLCLQIFNFCAQNPSCETCPVQAHCHAY------AESQKPPTKSKKAKIDCLMCDMSRL------------------------------------EEWGIAGGEVTQYPLKTRKKAPRNEALNILVITTDDEDGNLAYLMTKRPEGGLLAGQWEFPAFKISDDDEIPSYKARQDFSNT-------------QLMALFDLTSMKAIEPFMQSREDKGELVHIFSHVKHHMGVEHVALV--PSKD--FKALFPPVYTWMTAAKLAEAGITTGMKKVMQLLEKTK 448
BLAST of mRNA_E-siliculosus-1a_F_contig1444.2596.1 vs. uniprot
Match: A0A024TSB6_9STRA (Adenine DNA glycosylase n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TSB6_9STRA) HSP 1 Score: 293 bits (750), Expect = 4.360e-87 Identity = 187/465 (40.22%), Postives = 238/465 (51.18%), Query Frame = 1
Query: 331 MSAYGTWVSEVMLQQTRVETVIDYYVKWMTLFPTPNDLAAANLEQVNKAWAGLGYYRRAKMLHEGAKKVVSDHSGCLPGTAKELKDLPGIGPYTAGAVASIAFGECEPLVDGNVIRVLARLRAVASDPKNAGLNKLCW----------------------DLAGSIVDPGRPGDFNQALMELGATVCTVKNPSCSACPVRTSCFA-EKLTSAGSKGPKHAASSTRGTVFAAGNSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGEDGMAVVPTAVTDFPRKAAKTLVKDQALSVSVVER---DGPAGPQVLLVKRPETGLLAGQWECPCVMLRDGSEPRSSDAGNRA---RGTVVPSSDVPEKERLRLVDAFLFCDLRLSETLVRSRASVGTATHVFSHLRHTMQVERIEIASDPGMDNNIGTTSSRENRWVDVSDMGGVGITTGMKKVLALASKA 1638
++ YGTWVSE+M QQTRV+TV+ YY KWM FPT LAAA+ +QVN WAGLGYYRRA+MLH+GA+ V+ +G +P + LK +PGIGPYTAGA+AS+AF + EPLVDGNVIRV++RLRA+ DP + L K CW + ++DP RPGDFNQALMELGATVC+++ P+C+ CPV++ C A + GS P +A V + E G+ P AVT FP K K + + +SV+VV R D Q L+ KR + GLLAGQWE S+ S A R G S PE E L+ R G HVFSH++H M VE +E+ PG+ + S RW+ DM VGITTGMKKVL L KA
Sbjct: 56 VTPYGTWVSEIMCQQTRVDTVVAYYTKWMDTFPTVQSLAAADPDQVNAVWAGLGYYRRARMLHQGAQFVMDKFNGNMPHDIETLKTIPGIGPYTAGAIASVAFNQAEPLVDGNVIRVISRLRAIGGDPNHKPLIKFCWWGRLFSLLNRLSAHPVALGRFRESGKRLIDPSRPGDFNQALMELGATVCSIQTPACATCPVQSFCHAYAQFKEDGSTSPNNAPLQVECAV--------------------------------------CDLTRLEEWGVDA-PAAVTKFPLKTRKKAPRSEVISVAVVYRQPGDTMESRQYLMAKRSDRGLLAGQWEFLTSKATHDSDNVSDYAMRRTWANDGIATALSIRPET----------------LEGLIVRRCDRGELVHVFSHVKHHMGVEEVEV-DWPGVTKQL---ESPMVRWMSCQDMAEVGITTGMKKVLNLVVKA 461
BLAST of mRNA_E-siliculosus-1a_F_contig1444.2596.1 vs. uniprot
Match: A0A833SGU5_PHYIN (Adenine DNA glycosylase n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833SGU5_PHYIN) HSP 1 Score: 294 bits (752), Expect = 1.590e-86 Identity = 182/434 (41.94%), Postives = 233/434 (53.69%), Query Frame = 1
Query: 331 MSAYGTWVSEVMLQQTRVETVIDYYVKWMTLFPTPNDLAAANLEQVNKAWAGLGYYRRAKMLHEGAKKVVSDHSGCLPGTAKELKDLPGIGPYTAGAVASIAFGECEPLVDGNVIRVLARLRAVASDPKNAGLNKLCWDLAGSIVDP-GRPGDFNQALMELGATVCTVKNPSCSACPVRTSCFA-EKLTSAGSKGPKHAASSTRGTVFAAGNSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGEDGMAVVPTAVTDFPRKAAKTLVKDQALSVSVVERDGPAGPQVLLVKRPETGLLAGQWECPCVMLRDGSEPRSSDAGNRARGTVVPSSDVPEKERLRLVDAFLFCDLRLSETLVRSRASVGTATHVFSHLRHTMQVERIEIASDPGMDNNIGTTSSRENRWVDVSDMGGVGITTGMKKVLAL 1626
++ Y TWVSE+MLQQTRV+TV++Y+++W+ FPT LA AN E VN WAGLGYYRRA+MLH GAK VV ++ G LP T +L +PGIGPYTAGA+ASIAFG EPLVDGNVIRV+AR+RAV +DPKN L K W A +V+ RPG NQALMELGAT+CTV+NP CS CPV++ C A E++ +A A SST + NS S V+ AV P + + S SV D P+ + L+ KRP+ GLLAGQWE + D + + P S RL D F L S R +G THVFSH++H M +E + S P + + S RW+ V++M GITTG+KK+L L
Sbjct: 136 VAPYETWVSEIMLQQTRVDTVVEYFLRWIDKFPTVAALAEANEEDVNALWAGLGYYRRARMLHAGAKYVVENYDGELPSTVDQLLTIPGIGPYTAGAIASIAFGNREPLVDGNVIRVMARMRAVGADPKNKQLIKYSWKAAKELVEECDRPGALNQALMELGATMCTVQNPQCSDCPVKSVCLAYEEVNTAPKVESTSAESSTESS-----NSCSICDYTRATEWDETHTEVTKYPLKAKK----------NNSKNEVIAVAVVSAPTDSISVRRGKRKASTSVESSDSPSDWRFLMSKRPDGGLLAGQWEFLHSKMSDDDK-------------IPPFSKRKTFMDSRLTDIFGKTALSGSSRSFSERRDLGELTHVFSHVKHHMGIEHVHFKSQPEL-----SVESDALRWMTVAEMKQRGITTGVKKILQL 536
BLAST of mRNA_E-siliculosus-1a_F_contig1444.2596.1 vs. uniprot
Match: A0A6G0X8F5_9STRA (Adenine DNA glycosylase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X8F5_9STRA) HSP 1 Score: 290 bits (743), Expect = 2.200e-86 Identity = 172/451 (38.14%), Postives = 234/451 (51.88%), Query Frame = 1
Query: 292 VEEEQPSLLKRIPMSAYGTWVSEVMLQQTRVETVIDYYVKWMTLFPTPNDLAAANLEQVNKAWAGLGYYRRAKMLHEGAKKVVSDHSGCLPGTAKELKDLPGIGPYTAGAVASIAFGECEPLVDGNVIRVLARLRAVASDPKNAGLNKLCWDLAGSIVDPGRPGDFNQALMELGATVCTVKNPSCSACPVRTSCFAEKLTSAGSKGPKHAASSTRGTVFAAGNSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGEDGMAVVPTAVTDFPRKAAKTLVKDQALSVSVVER---DGPAGPQVLLVKRPETGLLAGQWECPCVMLRDGSEPRSSDAGNRARGTVVPSSDVPEKERLRLVDAFLFCDLRLSETLVRSRASVGTATHVFSHLRHTMQVERIEIASDPGMDNNIGTTSSRENRWVDVSDMGGVGITTGMKKVLALASK 1635
+ +P + +S Y TWVSE+M QQTRV+TV+ Y+ KWM +FPT LA A+ +QVN WAGLGYYRRA+MLH+GAK V+ +G +P + LK +PGIGPYTAGA+AS+AF + EPLVDGNVIRV +RLRA+ DP + L K CWD ++D RPGDFNQALMELGATVC+++ PSC +CPV+ C A +A +S D + VT +P K K +++ L+V V+ + D + L++KR E GLLAGQWE P + + D E +P+ + + + L + L+ R G HVFSH++H M +E +++ G +G S RW+ DM VGITTGMKKVL L +K
Sbjct: 43 IHSREPGYVASNAVSPYATWVSEIMCQQTRVDTVVQYFTKWMEVFPTIETLANADPDQVNSVWAGLGYYRRARMLHQGAKYVMEKFNGEMPSDVESLKSIPGIGPYTAGAIASVAFQQVEPLVDGNVIRVFSRLRAIGGDPNHKPLLKHCWDSGKQLIDENRPGDFNQALMELGATVCSIQTPSCESCPVKDFCLA----------------------YAQVDSKKISVPSADEIECSLCDLSRL-------------------DEWGIPGGPVTQYPLKTRKKAPRNEVLNVVVLYQQNSDDIEDRKYLMIKRAEGGLLAGQWEFPSLKVCDDEE-------------AIPAYTERKPITNDQLASVLCTKADKLDALIVHRRDQGELVHVFSHVKHHMGIEEVQVNWPDGK--LLGDDSVA--RWMTSDDMKQVGITTGMKKVLQLVTK 435
BLAST of mRNA_E-siliculosus-1a_F_contig1444.2596.1 vs. uniprot
Match: H3GVG8_PHYRM (Adenine DNA glycosylase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GVG8_PHYRM) HSP 1 Score: 293 bits (750), Expect = 4.460e-86 Identity = 182/438 (41.55%), Postives = 236/438 (53.88%), Query Frame = 1
Query: 331 MSAYGTWVSEVMLQQTRVETVIDYYVKWMTLFPTPNDLAAANLEQVNKAWAGLGYYRRAKMLHEGAKKVVSDHSGCLPGTAKELKDLPGIGPYTAGAVASIAFGECEPLVDGNVIRVLARLRAVASDPKNAGLNKLCWDLAGSIV-DPGRPGDFNQALMELGATVCTVKNPSCSACPVRTSCFAEKLTSAGSKGPKHAASSTRGTVFAAGNSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGEDGMAVVPTAVTDFP--RKAAKTLVKDQALSVSVVERDGPAGP---QVLLVKRPETGLLAGQWECPCVMLRDGSEPRSSDAGNRARGTVVPSSDVPEKERLRLVDAFLFCDLRLSETLVRSRASVGTATHVFSHLRHTMQVERIEIASDPGMDNNIGTTSSRENRWVDVSDMGGVGITTGMKKVLAL 1626
+ +Y TWVSE+MLQQTRV+TV++Y+++W+ FPT LA AN E VN WAGLGYYRRA+MLH GAK VV ++ G LP + +L +PGIGPYTAGA+ASIAFG EPLVDGNVIRV+AR+RAV +DPKN L W A +V + RPG FNQALMELGATVCTV+NP CS CPV++ C A + K K S A +SS E V+ AV P KA + + + S+S A P + L+ KRPE GLLAGQWE + DG + + P S RL+D L S+ L R+ +G H+FSH++H M +E + S P + + S E RW+ V++M +GITTG+KK+L L
Sbjct: 146 VESYETWVSEIMLQQTRVDTVVEYFLRWINKFPTVAALAEANEEDVNALWAGLGYYRRARMLHAGAKYVVENYGGELPSSVDKLLKIPGIGPYTAGAIASIAFGHREPLVDGNVIRVMARVRAVGADPKNKQLINFSWKSAKELVGECDRPGAFNQALMELGATVCTVQNPQCSDCPVKSVCLAYEEA----KKLKSKPESPVSPQLPAESSSPCSICDYTRVAEWDDSQPEVTKYPLKAKK--------NESRNEVICVAVVSSPSTEKAVASTRRKRKASMSAESDKLDASPSDWKFLMSKRPEGGLLAGQWEFLHTKMDDGDK-------------IPPFSKRKTFMDTRLMDLLGKSALTRSDALTPERSDLGELAHIFSHVKHHMGIEHVHFKSQPEL---LSAAESDELRWMTVAEMQQLGITTGVKKILQL 555
BLAST of mRNA_E-siliculosus-1a_F_contig1444.2596.1 vs. uniprot
Match: K3X2X9_GLOUD (Adenine DNA glycosylase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X2X9_GLOUD) HSP 1 Score: 292 bits (747), Expect = 2.390e-85 Identity = 177/441 (40.14%), Postives = 244/441 (55.33%), Query Frame = 1
Query: 331 MSAYGTWVSEVMLQQTRVETVIDYYVKWMTLFPTPNDLAAANLEQVNKAWAGLGYYRRAKMLHEGAKKVVSDHSGCLPGTAKELKDLPGIGPYTAGAVASIAFGECEPLVDGNVIRVLARLRAVASDPKNAGLNKLCWDLAGSIVDP-GRPGDFNQALMELGATVCTVKNPSCSACPVRTSCFAEKLTSAGSKGPKHAASSTRGTVFAAGNSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGEDGMAVVPTAVTDFPRKAAKTLVKDQALSVSVVERDG--PAGPQVLLVKRPETGLLAGQWECPCVMLRDGSEPRSSDAGNRARGTVVPSSDVPEKERLRLVDAFLFCDLRLSETLVRSRASVGTATHVFSHLRHTMQVERIEIASDP--GMDNNIGTTSSRENRWVDVSDMGGVGITTGMKKVLALASKA 1638
+S Y TWVSE+MLQQTRV+TV++Y+++W FPT LA + E VN WAGLGYYRRA+MLH GAK VV + G LP T ++L +PGIGPYTAGA++SIAF EPLVDGNVIRVLARLRAV +DPKN L K W +AG +V+ RPG NQA+MELGAT+CTV+NP CS CPV++SC A + + + KG K T FA+ + S G+ V+ AV + + A K ++ + + DG P L+ +RPE GLLAGQWE + DAG++ +P+ +K + L + R +G TH+FSH++H M VE + S P + + + + ++ RW++ +DM +GITTG+KK+L + +KA
Sbjct: 144 VSPYETWVSEIMLQQTRVDTVVEYFLRWTEKFPTVEALANGSEEDVNALWAGLGYYRRARMLHAGAKYVVENFEGELPSTIEQLLTIPGIGPYTAGAISSIAFENREPLVDGNVIRVLARLRAVGADPKNKQLIKFSWKVAGELVEECDRPGALNQAMMELGATMCTVQNPECSRCPVQSSCLAYEESQSSHKGEKT-------TRFASESLVSENDACTICDASRYGEWNESIREVTKYPLKAKK----GDSKNEVICVAVISYEDEGAAEAKKKKSTAKKPTKGDGAVPDNWHFLMARRPEEGLLAGQWEFIHQKV---------DAGDK-----IPAFAQRKKLMHPRLSELLGEQTTKFKQFQEQRRDLGELTHIFSHVKHHMGVEHLHFRSKPTVAVIDTMDASQQQQIRWMNAADMKQLGITTGVKKILNMVTKA 559 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1444.2596.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1444.2596.1 >prot_E-siliculosus-1a_F_contig1444.2596.1 ID=prot_E-siliculosus-1a_F_contig1444.2596.1|Name=mRNA_E-siliculosus-1a_F_contig1444.2596.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=515bp MRSTGITSESKFGLKQQRQQEGNDVLSLAVEEEQPSLLKRIPMSAYGTWVback to top mRNA from alignment at E-siliculosus-1a_F_contig1444:396..7044+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1444.2596.1 ID=mRNA_E-siliculosus-1a_F_contig1444.2596.1|Name=mRNA_E-siliculosus-1a_F_contig1444.2596.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=6649bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1444:396..7044+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1444:396..7044+ >mRNA_E-siliculosus-1a_F_contig1444.2596.1 ID=mRNA_E-siliculosus-1a_F_contig1444.2596.1|Name=mRNA_E-siliculosus-1a_F_contig1444.2596.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3090bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1444:396..7044+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |