mRNA_E-siliculosus-1a_F_contig1443.2591.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1443.2591.1
Unique NamemRNA_E-siliculosus-1a_F_contig1443.2591.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1443.2591.1 vs. uniprot
Match: D7FJ08_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJ08_ECTSI)

HSP 1 Score: 291 bits (745), Expect = 3.140e-99
Identity = 140/141 (99.29%), Postives = 141/141 (100.00%), Query Frame = 1 
Query:  109 MVLRWHHARKEYVFEWRDWPLWENEAIGRKLSSEGANAVVEELVRTGHAEWNDAGKSMVTLMWHSAEEIAAKLFDFVRKHDMVGSVFTVYELHQGDEVLGTDFFGMDEGLFRKALSVLESQERVVMFKGATSEEDGVKFLG 531
            MVLRWHHARKEY+FEWRDWPLWENEAIGRKLSSEGANAVVEELVRTGHAEWNDAGKSMVTLMWHSAEEIAAKLFDFVRKHDMVGSVFTVYELHQGDEVLGTDFFGMDEGLFRKALSVLESQERVVMFKGATSEEDGVKFLG
Sbjct:    1 MVLRWHHARKEYMFEWRDWPLWENEAIGRKLSSEGANAVVEELVRTGHAEWNDAGKSMVTLMWHSAEEIAAKLFDFVRKHDMVGSVFTVYELHQGDEVLGTDFFGMDEGLFRKALSVLESQERVVMFKGATSEEDGVKFLG 141
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BLAST of mRNA_E-siliculosus-1a_F_contig1443.2591.1 vs. uniprot
Match: A0A835YLA2_9STRA (ESCRT-II complex subunit-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLA2_9STRA)

HSP 1 Score: 242 bits (617), Expect = 3.260e-79
Identity = 110/176 (62.50%), Postives = 137/176 (77.84%), Query Frame = 1 
Query:    1 MTDSGFEKPEFYNFPPFFTLQPVLATREKQLRLWCDMVLRWHHARKEYVFEWRDWPLWENEAIGRKLSSEGANAVVEELVRTGHAEWNDAGKSMVTLMWHSAEEIAAKLFDFVRKHDMVGSVFTVYELHQGDEVLGTDFFGMDEGLFRKALSVLESQERVVMFKGATSEEDGVKFL 528
            M ++ F+ PEFY+FPPFFTLQPVLATREKQL+LWCDMVL +H ARK Y F WRDWPLWEN AI R+L   GA AVV ELVRTGHAEW D+GK+ ++L W +  + AA+L+++ R   +VGSV TVYELHQG++   T F GM+EG+ RKA++VLE+  R V+F+GATS EDG KF 
Sbjct:    1 MGEADFQVPEFYSFPPFFTLQPVLATREKQLKLWCDMVLAYHKARKAYAFAWRDWPLWENRAINRRLDEAGAQAVVAELVRTGHAEWQDSGKTSLSLFWDTPADTAARLYEWARSTGLVGSVVTVYELHQGEDTRETQFHGMEEGVLRKAIAVLEADGRAVLFQGATSTEDGFKFF 176
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BLAST of mRNA_E-siliculosus-1a_F_contig1443.2591.1 vs. uniprot
Match: A0A7S2EJ37_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EJ37_TRICV)

HSP 1 Score: 187 bits (474), Expect = 1.860e-57
Identity = 87/177 (49.15%), Postives = 120/177 (67.80%), Query Frame = 1 
Query:    1 MTDSGFEKPEFYNFPPFFTLQPVLATREKQLRLWCDMVLRWHHARKEYVFEWRDWPLWENEAIGRKLSSEGANAVVEELVRTGHAEWNDAG-KSMVTLMWHSAEEIAAKLFDFVRKHDMVGSVFTVYELHQGDEVLGTDFFGMDEGLFRKALSVLESQERVVMFKGATSEEDGVKFL 528
            M+ SGFE PEF++FPPFFT+QPVL TREKQ+ LW +++LR+H  RK       D PLW N  IGRKL  EG  AV+++ V++GH EW D   K+   ++W   E++A+ ++D+   +  + SV TVYELH G++V G  F G DE L R+AL++LE Q +  +FKG TS EDG+KF 
Sbjct:    1 MSLSGFELPEFFSFPPFFTIQPVLVTREKQMGLWRELILRYHTDRKIKTLVVHDCPLWSNPEIGRKLGQEGVKAVMDDFVKSGHGEWEDPDVKTRCRILWRKPEQLASDIYDWADANGYINSVCTVYELHSGEDVNGMSFQGADEELLRRALTILEDQGKCTVFKGETSSEDGIKFF 177
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BLAST of mRNA_E-siliculosus-1a_F_contig1443.2591.1 vs. uniprot
Match: W7U3C0_9STRA (Vacuolar protein sorting-associated protein 25 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U3C0_9STRA)

HSP 1 Score: 184 bits (468), Expect = 1.890e-56
Identity = 81/169 (47.93%), Postives = 119/169 (70.41%), Query Frame = 1 
Query:   25 PEFYNFPPFFTLQPVLATREKQLRLWCDMVLRWHHARKEYVFEWRDWPLWENEAIGRKLSSEGANAVVEELVRTGHAEWNDAGKSMVTLMWHSAEEIAAKLFDFVRKHDMVGSVFTVYELHQGDEV-LGTDFFGMDEGLFRKALSVLESQERVVMFKGATSEEDGVKFL 528
            PE++ FPPFFTLQPVL TR+ QL+LW ++VL+WH A+   + +  +WPL+ N AI R L  +G   VV+ LV +GHAEW D  ++   ++W SA+E+AA +  F+R + M G+V+TVYEL  GDE+ +G DF G +  +FR+AL +LE Q +  +FKG++ E DG+KF+
Sbjct:   13 PEYHGFPPFFTLQPVLETRKMQLKLWRELVLKWHQAKGVQILKLNEWPLFANPAINRTLPLDGRREVVQSLVSSGHAEWKDDSRTTALVLWRSAQEVAASILTFIRDNGMAGNVYTVYELRAGDEITVGADFHGTEPTIFRRALEILERQGKAALFKGSSEEGDGIKFV 181
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BLAST of mRNA_E-siliculosus-1a_F_contig1443.2591.1 vs. uniprot
Match: A0A7S2XTF5_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XTF5_9STRA)

HSP 1 Score: 181 bits (458), Expect = 4.990e-55
Identity = 85/177 (48.02%), Postives = 118/177 (66.67%), Query Frame = 1 
Query:    1 MTDSGFEKPEFYNFPPFFTLQPVLATREKQLRLWCDMVLRWHHARKEYVFEWRDWPLWENEAIGRKLSSEGANAVVEELVRTGHAEWNDAG-KSMVTLMWHSAEEIAAKLFDFVRKHDMVGSVFTVYELHQGDEVLGTDFFGMDEGLFRKALSVLESQERVVMFKGATSEEDGVKFL 528
            M  + FE PEFY+FPPFFT+QPVLATREKQ+ LW +++L++H  RK       D PLW N  IGR+L+ E   AV+ + V++GH EW DA  ++   ++W   E++A+ ++D+   +  + SV TVYELH G++V G  F G DE L R+AL +LE Q +  MFKG TS EDG+KF 
Sbjct:    1 MGTAKFEYPEFYSFPPFFTIQPVLATREKQMGLWRELILKYHTDRKIKTLVLHDCPLWMNPDIGRELNQEAIQAVMNDFVKSGHGEWEDADVQTRCRILWRKPEQLASDIYDWAMANGYINSVCTVYELHSGEDVNGMSFEGADEELLRRALGILEDQGKCTMFKGDTSSEDGIKFF 177
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BLAST of mRNA_E-siliculosus-1a_F_contig1443.2591.1 vs. uniprot
Match: B7G749_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G749_PHATC)

HSP 1 Score: 179 bits (453), Expect = 2.610e-54
Identity = 82/170 (48.24%), Postives = 115/170 (67.65%), Query Frame = 1 
Query:   16 FEKPEFYNFPPFFTLQPVLATREKQLRLWCDMVLRWHHARKEYVFEWRDWPLWENEAIGRKLSSEGANAVVEELVRTGHAEWNDAGKSMVTLMWHSAEEIAAKLFDFVRKHDMVGSVFTVYELHQGDEVLGTDFFGMDEGLFRKALSVLESQERVVMFKGATSEEDGVKF 525
            F+ PEFY+FPPFFT+QPVLATREKQ+ LW +++LR+H  +K       D PLW+N+ I R+L       V+++  R GH EW DA K+   ++W + E++A  +  +  K+  VGSV TVYELH G++V G  F G DE L R+ALS+LE + +  +F+G TSEEDG+KF
Sbjct:    4 FQYPEFYSFPPFFTIQPVLATREKQMALWRELILRYHTEKKIKTLVVHDCPLWKNDNIKRRLQPGEIQEVLDDFCRHGHGEWQDANKTTCRILWRTPEQLATDIHQWAEKNGYVGSVCTVYELHSGEDVNGMSFQGADEELLRRALSILEDRGKCTIFRGETSEEDGIKF 173
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BLAST of mRNA_E-siliculosus-1a_F_contig1443.2591.1 vs. uniprot
Match: A0A6U3ZAU0_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3ZAU0_9STRA)

HSP 1 Score: 177 bits (449), Expect = 1.160e-53
Identity = 81/177 (45.76%), Postives = 117/177 (66.10%), Query Frame = 1 
Query:    1 MTDSGFEKPEFYNFPPFFTLQPVLATREKQLRLWCDMVLRWHHARKEYVFEWRDWPLWENEAIGRKLSSEGANAVVEELVRTGHAEWNDAG-KSMVTLMWHSAEEIAAKLFDFVRKHDMVGSVFTVYELHQGDEVLGTDFFGMDEGLFRKALSVLESQERVVMFKGATSEEDGVKFL 528
            M  + FE PEFY+F PFFT+QPVLATREKQ+ LW D++L++H   +       D PLW+N  IGR+L +E   AV+E+ ++ GH EW D   ++   ++W   E++A+ ++D+   +  + SV TVYELH G+++ G  F G DE L R+ALS+LE Q +  +FKG TS EDG+KF 
Sbjct:    1 MASANFEYPEFYSFKPFFTIQPVLATREKQMGLWRDLILKYHTELRIKTLVVHDCPLWKNPGIGRELDNESIMAVMEDFIKGGHGEWEDPDVRTRCRILWRKPEQLASDIYDWAEANGYINSVCTVYELHSGEDINGMSFEGADEELLRRALSILEDQGKCTIFKGDTSSEDGIKFF 177
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BLAST of mRNA_E-siliculosus-1a_F_contig1443.2591.1 vs. uniprot
Match: W2JSH0_PHYPR (Uncharacterized protein n=17 Tax=Peronosporaceae TaxID=4777 RepID=W2JSH0_PHYPR)

HSP 1 Score: 176 bits (446), Expect = 3.310e-53
Identity = 85/171 (49.71%), Postives = 114/171 (66.67%), Query Frame = 1 
Query:   16 FEKPEFYNFPPFFTLQPVLATREKQLRLWCDMVLRWHHARKEYVFEWRDWPLWENEAIGRKLSSEGANAVVEELVRTGHAEWNDAGKSMVTLMWHSAEEIAAKLFDFVRKHDMVGSVFTVYELHQGDEVLGTDFFGMDEGLFRKALSVLESQERVVMFKGATSEEDGVKFL 528
            F  PE+Y+FPPFFTLQPV ATREKQL LW  ++L +H A    +F+     L+EN  I R ++ +G  AVVE L+R GH  W D  K+   +MW    E AA+++DF ++H M+G+VFTVYEL+ G+E LGT+  GM+  L R+AL VLE + +  +  G T EEDGVKFL
Sbjct:    4 FSYPEYYDFPPFFTLQPVRATREKQLVLWQQLILEYHRAHDLPLFQPLASTLFENVKISRNMAQDGRMAVVEHLIRCGHGRWEDDTKTRCRIMWKKPAEWAAEIYDFAKEHGMLGNVFTVYELYAGEETLGTNIHGMEPWLLREALRVLEGEGKAAVIAGETCEEDGVKFL 174
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BLAST of mRNA_E-siliculosus-1a_F_contig1443.2591.1 vs. uniprot
Match: A0A8K1C878_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C878_PYTOL)

HSP 1 Score: 175 bits (444), Expect = 6.650e-53
Identity = 85/172 (49.42%), Postives = 117/172 (68.02%), Query Frame = 1 
Query:   13 GFEKPEFYNFPPFFTLQPVLATREKQLRLWCDMVLRWHHARKEYVFEWRDWPLWENEAIGRKLSSEGANAVVEELVRTGHAEWNDAGKSMVTLMWHSAEEIAAKLFDFVRKHDMVGSVFTVYELHQGDEVLGTDFFGMDEGLFRKALSVLESQERVVMFKGATSEEDGVKFL 528
             F  PE+Y+FPPFFTLQPV ATREKQL LW  ++L +H  + + +F+    PL+EN  I RK++S+G  AVVE L+R G+  W D  K+   +MW    E AA+++DF  +  M+G+V+TVYEL+ G+E LGT   GM+  L R++L VLES+ +  +  GAT EEDGVKFL
Sbjct:    3 AFSYPEYYDFPPFFTLQPVRATREKQLVLWKQLILEFHRTQGQPLFQPFTSPLFENAKISRKMASDGRLAVVEYLIRCGNVTWEDDTKTRCRIMWKKPAEWAAEIYDFATERAMIGNVYTVYELYAGEETLGTPVHGMEPWLLRESLKVLESEGKAAIIDGATLEEDGVKFL 174
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BLAST of mRNA_E-siliculosus-1a_F_contig1443.2591.1 vs. uniprot
Match: A0A024FV78_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FV78_9STRA)

HSP 1 Score: 174 bits (441), Expect = 2.080e-52
Identity = 83/171 (48.54%), Postives = 115/171 (67.25%), Query Frame = 1 
Query:   16 FEKPEFYNFPPFFTLQPVLATREKQLRLWCDMVLRWHHARKEYVFEWRDWPLWENEAIGRKLSSEGANAVVEELVRTGHAEWNDAGKSMVTLMWHSAEEIAAKLFDFVRKHDMVGSVFTVYELHQGDEVLGTDFFGMDEGLFRKALSVLESQERVVMFKGATSEEDGVKFL 528
            F  PE+Y+FPPFFTLQPV ATREKQL LW  ++L +H AR   +F  +  PL+ N  I RK+ +EG  A++E L++ G+A W DA ++   L+W    E AA+L+DFV+   M+G ++TVYEL+ G+E LG+ F GM+    R AL +LE   +VV+  G T EEDGVKF+
Sbjct:    7 FTFPEYYDFPPFFTLQPVRATREKQLGLWKQLILDYHQARHLSIFSPQTSPLFANCKISRKMKAEGQTAIIEYLIQCGNAIWEDASETRCRLIWKKPAEWAAELYDFVKGRGMLGKIYTVYELYAGEETLGSQFHGMEPWSLRDALKILEEHGKVVLISGTTCEEDGVKFI 177
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1443.2591.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJ08_ECTSI3.140e-9999.29Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YLA2_9STRA3.260e-7962.50ESCRT-II complex subunit-domain-containing protein... [more]
A0A7S2EJ37_TRICV1.860e-5749.15Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
W7U3C0_9STRA1.890e-5647.93Vacuolar protein sorting-associated protein 25 n=2... [more]
A0A7S2XTF5_9STRA4.990e-5548.02Hypothetical protein n=1 Tax=Attheya septentrional... [more]
B7G749_PHATC2.610e-5448.24Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A6U3ZAU0_9STRA1.160e-5345.76Hypothetical protein n=3 Tax=Ditylum brightwellii ... [more]
W2JSH0_PHYPR3.310e-5349.71Uncharacterized protein n=17 Tax=Peronosporaceae T... [more]
A0A8K1C878_PYTOL6.650e-5349.42Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A024FV78_9STRA2.080e-5248.54Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1443contigE-siliculosus-1a_F_contig1443:11112..13498 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size534
Model size534
Exons3
Ec32 orthologEc-07_004870.1
Ec32 ortholog descriptionESCRT-II complex, Vps25 subunit, N-terminal winged helix
Hectar predicted targeting categoryother localisation
BRITEko00000,ko00001,ko00002,ko01000,ko01001,ko01009,ko03016,ko04131,ko04147
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.S
EC2.1.1.219,2.1.1.220,2.7.11.1,6.2.1.12,6.3.5.3
EggNOG OGsKOG4068@1,KOG4068@2759
EggNOG free text desc.protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway
GOsGO:0000003,GO:0000429,GO:0000430,GO:0000433,GO:0000578,GO:0000814,GO:0001894,GO:0001932,GO:0001933,GO:0002009,GO:0002165,GO:0003002,GO:0003006,GO:0003674,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005768,GO:0005829,GO:0006355,GO:0006357,GO:0006403,GO:0006469,GO:0006508,GO:0006511,GO:0006605,GO:0006623,GO:0006807,GO:0006810,GO:0006811,GO:0006820,GO:0006862,GO:0006886,GO:0006897,GO:0006914,GO:0006996,GO:0007032,GO:0007034,GO:0007154,GO:0007163,GO:0007175,GO:0007176,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007308,GO:0007309,GO:0007314,GO:0007350,GO:0007351,GO:0007389,GO:0007444,GO:0007483,GO:0007484,GO:0007485,GO:0007548,GO:0007552,GO:0007560,GO:0007584,GO:0008104,GO:0008150,GO:0008152,GO:0008283,GO:0008285,GO:0008298,GO:0008358,GO:0008593,GO:0008595,GO:0009056,GO:0009057,GO:0009605,GO:0009653,GO:0009790,GO:0009791,GO:0009798,GO:0009880,GO:0009886,GO:0009887,GO:0009888,GO:0009889,GO:0009890,GO:0009892,GO:0009948,GO:0009952,GO:0009966,GO:0009968,GO:0009987,GO:0009991,GO:0009994,GO:0010008,GO:0010256,GO:0010468,GO:0010469,GO:0010556,GO:0010558,GO:0010563,GO:0010605,GO:0010629,GO:0010646,GO:0010648,GO:0010669,GO:0010941,GO:0012505,GO:0015031,GO:0015711,GO:0015748,GO:0015833,GO:0015865,GO:0015867,GO:0015868,GO:0015893,GO:0015931,GO:0016020,GO:0016043,GO:0016050,GO:0016192,GO:0016197,GO:0016236,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0019941,GO:0019953,GO:0021700,GO:0022411,GO:0022412,GO:0022414,GO:0022607,GO:0023051,GO:0023057,GO:0030011,GO:0030154,GO:0030163,GO:0030539,GO:0031090,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031399,GO:0031400,GO:0031410,GO:0031667,GO:0031668,GO:0031669,GO:0031670,GO:0031974,GO:0031981,GO:0031982,GO:0032268,GO:0032269,GO:0032501,GO:0032502,GO:0032504,GO:0032509,GO:0032511,GO:0032984,GO:0032991,GO:0033036,GO:0033365,GO:0033673,GO:0034613,GO:0035088,GO:0035090,GO:0035112,GO:0035126,GO:0035215,GO:0035239,GO:0035282,GO:0035295,GO:0036257,GO:0036258,GO:0036452,GO:0042058,GO:0042059,GO:0042127,GO:0042221,GO:0042325,GO:0042326,GO:0042493,GO:0042592,GO:0042802,GO:0042803,GO:0042886,GO:0042981,GO:0043067,GO:0043086,GO:0043162,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043328,GO:0043549,GO:0043632,GO:0043933,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044433,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045013,GO:0045014,GO:0045184,GO:0045197,GO:0045199,GO:0045324,GO:0045450,GO:0045859,GO:0045892,GO:0045934,GO:0045936,GO:0045990,GO:0046015,GO:0046618,GO:0046661,GO:0046907,GO:0046983,GO:0047485,GO:0048468,GO:0048469,GO:0048477,GO:0048513,GO:0048519,GO:0048523,GO:0048563,GO:0048569,GO:0048583,GO:0048585,GO:0048599,GO:0048608,GO:0048609,GO:0048707,GO:0048729,GO:0048731,GO:0048803,GO:0048805,GO:0048806,GO:0048808,GO:0048856,GO:0048869,GO:0048871,GO:0050678,GO:0050680,GO:0050730,GO:0050732,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051174,GO:0051179,GO:0051234,GO:0051246,GO:0051248,GO:0051252,GO:0051253,GO:0051338,GO:0051348,GO:0051503,GO:0051603,GO:0051641,GO:0051649,GO:0051704,GO:0051716,GO:0060249,GO:0060255,GO:0060429,GO:0060562,GO:0060810,GO:0060811,GO:0061097,GO:0061099,GO:0061245,GO:0061458,GO:0061919,GO:0061984,GO:0061985,GO:0061986,GO:0061987,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070086,GO:0070727,GO:0070887,GO:0070925,GO:0071496,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071985,GO:0072594,GO:0072665,GO:0072666,GO:0080090,GO:0090598,GO:0097352,GO:0097708,GO:0098588,GO:0098657,GO:0098796,GO:0098805,GO:1901184,GO:1901185,GO:1901264,GO:1901564,GO:1901565,GO:1901575,GO:1902679,GO:1903506,GO:1903507,GO:1904669,GO:2000112,GO:2000113,GO:2000272,GO:2001141
KEGG ModuleM00039,M00048,M00137,M00350,M00410
KEGG Pathwayko00130,ko00230,ko00360,ko00940,ko01100,ko01110,ko01130,ko04144,map00130,map00230,map00360,map00940,map01100,map01110,map01130,map04144
KEGG ReactionR01616,R01943,R02194,R02221,R02255,R04463,R06583
KEGG koko:K01904,ko:K01952,ko:K07442,ko:K08867,ko:K12189
KEGG rclassRC00004,RC00010,RC00131,RC01160
Preferred nameVPS25
Seed eggNOG ortholog2880.D7FJ08
Seed ortholog evalue1.5e-76
Seed ortholog score292.4
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1443.2591.1prot_E-siliculosus-1a_F_contig1443.2591.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1443 11112..13498 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927953.6440763-CDS-E-siliculosus-1a_F_contig1443:11111..112341622927953.6440763-CDS-E-siliculosus-1a_F_contig1443:11111..11234Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1443 11112..11234 -
1696318751.762689-CDS-E-siliculosus-1a_F_contig1443:11111..112341696318751.762689-CDS-E-siliculosus-1a_F_contig1443:11111..11234Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1443 11112..11234 -
1622927953.6606221-CDS-E-siliculosus-1a_F_contig1443:11582..119131622927953.6606221-CDS-E-siliculosus-1a_F_contig1443:11582..11913Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1443 11583..11913 -
1696318751.7781184-CDS-E-siliculosus-1a_F_contig1443:11582..119131696318751.7781184-CDS-E-siliculosus-1a_F_contig1443:11582..11913Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1443 11583..11913 -
1622927953.6739192-CDS-E-siliculosus-1a_F_contig1443:13418..134981622927953.6739192-CDS-E-siliculosus-1a_F_contig1443:13418..13498Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1443 13419..13498 -
1696318751.7895-CDS-E-siliculosus-1a_F_contig1443:13418..134981696318751.7895-CDS-E-siliculosus-1a_F_contig1443:13418..13498Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1443 13419..13498 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1443.2591.1

>prot_E-siliculosus-1a_F_contig1443.2591.1 ID=prot_E-siliculosus-1a_F_contig1443.2591.1|Name=mRNA_E-siliculosus-1a_F_contig1443.2591.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=178bp
MTDSGFEKPEFYNFPPFFTLQPVLATREKQLRLWCDMVLRWHHARKEYVF
EWRDWPLWENEAIGRKLSSEGANAVVEELVRTGHAEWNDAGKSMVTLMWH
SAEEIAAKLFDFVRKHDMVGSVFTVYELHQGDEVLGTDFFGMDEGLFRKA
LSVLESQERVVMFKGATSEEDGVKFLG*
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mRNA from alignment at E-siliculosus-1a_F_contig1443:11112..13498-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1443.2591.1 ID=mRNA_E-siliculosus-1a_F_contig1443.2591.1|Name=mRNA_E-siliculosus-1a_F_contig1443.2591.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=2387bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1443:11112..13498- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGACTGATTCAGGTTTCGAGAAACCCGAGTTTTACAACTTCCCCCCCTT
CTTCACTCTACAGCCTGTGCTGGCAACCCGGTGAGTGCTGCTCTCTTTGT
ACTCATATTCCACACGAGGAAGGCACAGAAACTCAAGCTGAGAATGTACA
TATCTGACAGTGTGCACACATGACGCGCTGTTGTGTGGAGATGGATAGAA
GACGCAAGTTGTGTGACCCGAGGCTGGCTGTTGTCTTCACATTGAAACCG
TGCAGGCGTTCGGGTCTGCTCAAGTACCTTCTGACATCCGTACCGTGACA
CCGTACCGGTCAAACTGAATATTTCCACACAAGCAGTGTACATGTAATAT
GTTCCCCATTGTGACGCCAAAAATAATCATGGTGGCCTTTTAGATGGGCT
TTATTGATACGTAGGTTCAACAGCAGTATTTTGCAACAGCTCTTGCGTGT
GGTGATCCAAAACTCTAACGAAGGGATACATTCAGTGTAAATACTGAATT
CTCCCTTACACGGCTGCCTCTGTGTTTTCGCGTGCGAAGTGTTGGTTTGC
TACTCGTTTAGAGTTCTTCAGTCGATAGGGACCCAGTGACCGTTGCGATC
CAATACTCCAGCCTGCGATATGGATCTCTGCATATGTTGATGTTCTGTTG
TGTGGCGAAGTTTCGGATGGCGTTTGCCACTTCATTTATGCCTTCGCCGA
CGACTCGCGTGACGTTGGCCTCCGAGAAACATAAAAAAGGCGAACTCTTG
AAAGCAGCAAGCGAATACGATGGCGCAGAAAACTTACACTTTACCATTCA
ACCTATTCGTGCGGGCGTACTTCATCGCTAACGGCGCTGAAATCCTTTCC
TGCGATCGTGGCAAGCAATGGTCTACATGCATATCAACGGTGCCAACGAT
GTGATTTGGAATGGCTGGGCGGCAAAAATTTTAGAAGGGATCCAATTGCG
TAGGTTATCGTATAGGCAGTAACTCCGGTGATATGCCGGAGGTGTACACT
GGCGCACCGAAAAGATGGAACGAAAGACACGTAACACTGCTTGACTCCCC
ACCAGTAAGGCAGCTTGATGTCCGTGTTGTAAACTGGTTGCTGTGCGCTT
TAAGTTTCGAAACCGTTTCCTTTGGCGATGAGTCCCTGCAGGTCGGGTCA
TGAGAAACATGCCTTTCAAATGAGCATCATTCGAAGACATCCTCTGGCTA
CAGAACAAGACCCCGGGGATTTCAGGTTTTTTTCTCAAGAATCTTTCTGA
GCTTATGCCCTGCCGTAGTCGTTCTCCCGTGATAGGTTTCCACATACGTT
GCTTCAACGATATAGAATAGTGCGCATGGGGGCGTTCTTCGCAGCGGCTT
AACCACGGCCTTGTCACTAGGAGCGCCATATTTCTTCTGTCACTTCTTGT
CTTGTTTCTTTACTCTCTTCAAAGAGCAGGGCCTCGACTTTTCACGTACA
AAGATAGTGCCCCGGCCAGCGCTACAGCTGTGCCTATCTCTTCCGTTGTC
GTCGCGGCTCGAAGAGATTCGTGAGTTCGCTCAGGTACGAGTATTCACTA
CCGTGTCACCTATCGATTTTGCCCACCTCGAACAGAGAAAAACAACTGAG
GTTATGGTGCGACATGGTACTGAGATGGCACCACGCTAGAAAGGAGTACG
TGTTCGAGTGGAGAGACTGGCCGCTGTGGGAAAACGAAGCAATCGGACGA
AAGCTAAGCAGTGAGGGGGCGAACGCTGTCGTCGAAGAATTGGTTCGCAC
AGGCCACGCAGAGTGGAACGATGCTGGAAAGTCCATGGTGACTCTAATGT
GGCACAGCGCGGAAGAGATTGCAGCCAAGCTGTTCGACTTCGTGAGGAAG
CACGACATGGTCGGCAGTGTTTTCACGGTGTACGAATTACACCAAGGCGA
TGAGGTCTTGGGGACGGTAAGAGCTACTGCGTGTGTGGCTTGGGCCCATG
AATCTAAGAGCTGGCTTCAGGTCTAGTGTGGCCACACACGTTTCAATGGT
CCTTGCCCTCTCGATGGTGTGTTGGTAAACCAACGTTTACAGCAGTACCA
GGCTTTGCCGAGAGCTCTCGACTCGTCTGCCGAGAGGAGCGATTGTCTTT
GATCGAATATGTAGGTGGTACTGTAGTTCAGCCCCCCTCGACAACACACG
CTCTACTCAGGTTCGGGTTCCACGCGCAATGGCTGCATTGTTTTCGTGCT
AAACCAACTGAATTTGGAACACACTTTCGCAACTCTTTCTCGTTCTTCAT
TTTGATGTGCGCAGGATTTTTTCGGGATGGATGAAGGGTTATTCAGGAAA
GCGCTATCTGTCTTGGAGAGCCAAGAGCGAGTGGTTATGTTCAAGGGGGC
GACTTCGGAAGAGGATGGAGTAAAGTTCTTAGGATAA
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1443:11112..13498-

>mRNA_E-siliculosus-1a_F_contig1443.2591.1 ID=mRNA_E-siliculosus-1a_F_contig1443.2591.1|Name=mRNA_E-siliculosus-1a_F_contig1443.2591.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1068bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1443:11112..13498- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGACTGATTCAGGTTTCGAGAAACCCGAGTTTTACAACTTCCCCCCCTT
CTTCACTCTACAGCCTGTGCTGGCAACCCGATGACTGATTCAGGTTTCGA
GAAACCCGAGTTTTACAACTTCCCCCCCTTCTTCACTCTACAGCCTGTGC
TGGCAACCCGAGAAAAACAACTGAGGTTATGGTGCGACATGGTACTGAGA
TGGCACCACGCTAGAAAGGAGTACGTGTTCGAGTGGAGAGACTGGCCGCT
GTGGGAAAACGAAGCAATCGGACGAAAGCTAAGCAGTGAGGGGGCGAACG
CTGTCGTCGAAGAATTGGTTCGCACAGGCCACGCAGAGTGGAACGATGCT
GGAAAGTCCATGGTGACTCTAATGTGGCACAGCGCGGAAGAGATTGCAGC
CAAGCTGTTCGACTTCGTGAGGAAGCACGACATGGTCGGCAGTGTTTTCA
CGGTGTACGAATTACACCAAGGCGATGAGGTCTTGGGGACGAGAAAAACA
ACTGAGGTTATGGTGCGACATGGTACTGAGATGGCACCACGCTAGAAAGG
AGTACGTGTTCGAGTGGAGAGACTGGCCGCTGTGGGAAAACGAAGCAATC
GGACGAAAGCTAAGCAGTGAGGGGGCGAACGCTGTCGTCGAAGAATTGGT
TCGCACAGGCCACGCAGAGTGGAACGATGCTGGAAAGTCCATGGTGACTC
TAATGTGGCACAGCGCGGAAGAGATTGCAGCCAAGCTGTTCGACTTCGTG
AGGAAGCACGACATGGTCGGCAGTGTTTTCACGGTGTACGAATTACACCA
AGGCGATGAGGTCTTGGGGACGGATTTTTTCGGGATGGATGAAGGGTTAT
TCAGGAAAGCGCTATCTGTCTTGGAGAGCCAAGAGCGAGTGGTTATGTTC
AAGGGGGCGACTTCGGAAGAGGATGGAGTAAAGTTCTTAGGATAAGATTT
TTTCGGGATGGATGAAGGGTTATTCAGGAAAGCGCTATCTGTCTTGGAGA
GCCAAGAGCGAGTGGTTATGTTCAAGGGGGCGACTTCGGAAGAGGATGGA
GTAAAGTTCTTAGGATAA
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