mRNA_E-siliculosus-1a_F_contig14393.2568.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig14393.2568.1
Unique NamemRNA_E-siliculosus-1a_F_contig14393.2568.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig14393.2568.1 vs. uniprot
Match: D8LNC7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNC7_ECTSI)

HSP 1 Score: 395 bits (1014), Expect = 1.210e-129
Identity = 304/409 (74.33%), Postives = 315/409 (77.02%), Query Frame = 1
Query:    1 QKEADLTATSMPTDPELRRKLDIRHAKSNRERDSAATTAKGISTTNTAPTATVGEVADDKSSSSATTGPKRAAAFSTVVASNDGDDGDKTAAAPEATPALSTPTTXXXXXXXXXXXXXADPSTRADVANNAASGASMAEFMTGKARQARAVNDHGKKAGAGXXXXRSSPTPVSNMWTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------------------------------SFFPPNEFHPENILRSGRFMIGKLLSPGKKAMIYVSPNSGCVVHASSAGKAPRDEKGRAIGPVPQELKTVITPNEQQMSKIERNRSEIWGQRLERSTAAREGRELKRSKMAAITGVLPFGKNGFRRRREREHAEAHLME 1116
            QKEADLTATSMPTDPELRRKLD RHAKSNRERDSA   AK +STTNTAPTATVG+VAD+KSSSSATT P RAAAFSTV   ND DDGDKTAAA EATP  STP T X   XXXXXXXX                 SMAEFMT KAR+ARAVNDHGKKAGAG    RSSP PVSN WTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   XXXXXXXXXX                                     SF PP+EFH EN+LR+GRF+ GKL+SPGKKAMIYVSPNS  VVHASSAGKA RDE+GR IGPVPQ+LKTVITPNEQQMSKIERNRSEIW QRLER  AAREG ELKRSKMAAITGVLPFGKNGFRRRREREHAEAHLME
Sbjct:  175 QKEADLTATSMPTDPELRRKLDNRHAKSNRERDSATAVAKDMSTTNTAPTATVGDVADNKSSSSATTAPNRAAAFSTVADPNDNDDGDKTAAASEATPTSSTPATAXAAPXXXXXXXXXXXXXXXXXXXXXXXXXSMAEFMTSKAREARAVNDHGKKAGAGGGGERSSPIPVSNTWTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSNXXXXXXXXXXXXXXXYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFSPPDEFHDENVLRAGRFLFGKLMSPGKKAMIYVSPNSSSVVHASSAGKATRDEEGRKIGPVPQKLKTVITPNEQQMSKIERNRSEIWAQRLERGKAAREGGELKRSKMAAITGVLPFGKNGFRRRREREHAEAHLME 583          
BLAST of mRNA_E-siliculosus-1a_F_contig14393.2568.1 vs. uniprot
Match: D8LNB6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNB6_ECTSI)

HSP 1 Score: 377 bits (968), Expect = 4.550e-123
Identity = 284/372 (76.34%), Postives = 296/372 (79.57%), Query Frame = 1
Query:    1 QKEADLTATSMPTDPELRRKLDIRHAKSNRERDSAATTAKGISTTNTAPTATVGEVADDKSSSSATTGPKRAAAFSTVVASNDGDDGDKTAAAPEATPALSTPTTXXXXXXXXXXXXXADPSTRADVANNAASGASMAEFMTGKARQARAVNDHGKKAGAGXXXXRSSPTPVSNMWTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFFPPNEFHPENILRSGRFMIGKLLSPGKKAMIYVSPNSGCVVHASSAGKAPRDEKGRAIGPVPQELKTVITPNEQQMSKIERNRSEIWGQRLERSTAAREGRELKRSKMAAITGVLPFGKNGFRRRREREHAEAHLME 1116
            Q EA+LTATSMPTDPELRR+LDIRHAKSNRERDSAA  AK +STTNTAPTATVGEV            P RA AFSTV    D +                    XXXXXXXXXX   ADPSTRADV NN ASGASMAEFMTGKAR+ARAVNDHGKKAGAG     SSP PVSN WTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          SF PP+EFH EN+LR+GRF+ GKL+SPGKKAMIYVSPNS  VVHASSAGKA RDE+GR IGPVPQ+LKTVITPNEQQMSKIERNRSEIW QRLER  AAREG ELKRSKMAAITGVLPFGKNGFRRRREREHAEAHLME
Sbjct:  188 QNEANLTATSMPTDPELRRRLDIRHAKSNRERDSAAAAAKDMSTTNTAPTATVGEVXXXXXXXXXXXXPNRAEAFSTVA---DPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTAADPSTRADVGNNPASGASMAEFMTGKAREARAVNDHGKKAGAGGGGEVSSPIPVSNSWTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHYSNGNTNGNSFSPPDEFHDENVLRAGRFLFGKLMSPGKKAMIYVSPNSSSVVHASSAGKATRDEEGRKIGPVPQKLKTVITPNEQQMSKIERNRSEIWAQRLERGKAAREGGELKRSKMAAITGVLPFGKNGFRRRREREHAEAHLME 556          
BLAST of mRNA_E-siliculosus-1a_F_contig14393.2568.1 vs. uniprot
Match: A0A6H5KKU9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKU9_9PHAE)

HSP 1 Score: 349 bits (895), Expect = 5.140e-113
Identity = 296/425 (69.65%), Postives = 309/425 (72.71%), Query Frame = 1
Query:    1 QKEADLTATSMPTDPELRRKLDIRHAKSNRERDSAATTAKGISTTNTAPTATVGEVADDKSSSSATT-GPKRAAAFSTVVASNDGDDGDKTAAAPEATPALSTPTTXXXXXXXXXXXXXADPSTRADVA---------------------NNAASGASMAEFMTGKARQARAVNDHGKKAGAGXXXXRSSPTPVSNMWTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------------------------SFFPPNEFHPENILRSGRFMIGKLLSPGKKAMIYVSPNSGCVVHASSAGKAPRDEKGRAIGPVPQELKTVITPNEQQMSKIERNRSEIWGQRLERSTAAREGRELKRSKMAAITGVLPFGKNGFRRRREREHAEAHLME 1116
            QKEADLTA+SMPTDPELRRKLDIRHAKSNRERDSAA TAKG+STTNT PTATVGEVADDKSS                  A ++GDDGD TAAAP+ATPA ST  T XXXXXXXX    A+P+TRADVA                     NN ASGASMAEFMTGKARQARAVNDHGKK  AG XXX            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                               SF PPNEFH EN+LR+ RF+ GKL+ P KKAMIYVSPNSG VVHASSAG+APRDE GR IGPVPQ+L TV  PNEQQMSKIERNRSEIW QRL RS A REGRELKRSKMAAI GVLPFGKNGFRRRR REHAEAHLME
Sbjct:   96 QKEADLTASSMPTDPELRRKLDIRHAKSNRERDSAAATAKGMSTTNTVPTATVGEVADDKSSXXXXXXNXXXXXXXXXXXAPDEGDDGDNTAAAPKATPASSTHATAXXXXXXXXAETAANPTTRADVATTSLPVRRYXXXXXXXXXXVGNNPASGASMAEFMTGKARQARAVNDHGKKVVAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSFSPPNEFHDENVLRAERFLFGKLVGPTKKAMIYVSPNSGSVVHASSAGEAPRDEDGRKIGPVPQKLMTVFAPNEQQMSKIERNRSEIWAQRLGRSEALREGRELKRSKMAAIMGVLPFGKNGFRRRRAREHAEAHLME 520          
BLAST of mRNA_E-siliculosus-1a_F_contig14393.2568.1 vs. uniprot
Match: A0A6H5K5J3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5J3_9PHAE)

HSP 1 Score: 352 bits (904), Expect = 7.710e-113
Identity = 287/378 (75.93%), Postives = 299/378 (79.10%), Query Frame = 1
Query:    1 QKEADLTATSMPTDPELRRKLDIRHAKSNRERDSAATTAKGISTTNTAPTATVGEVADDK-SSSSATTGPKRAAAFSTVVASNDGDDGDKTAAAPEATPALSTPTTXXXXXXXXXXXXXADPSTRADVANNAASGASMAEFMTGKARQARAVNDHGKKAGAGXXXXRSSPTPVSNMWTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----SFFPPNEFHPENILRSGRFMIGKLLSPGKKAMIYVSPNSGCVVHASSAGKAPRDEKGRAIGPVPQELKTVITPNEQQMSKIERNRSEIWGQRLERSTAAREGRELKRSKMAAITGVLPFGKNGFRRRREREHAEAHLME 1116
            QKEADLTA+SMPTDPELRRKLDIRHAKSNRERDSAA TA           ATVGEVAD+K SS                      DDGDKTA+A EATPA S    XXXXXXXXXXXX ADPSTRADV  N ASGASMAEFMTGKAR AR VNDHGKKA AG  X  SSP PVSN W XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         SF PPNEFH EN+LR+ RF+ GKL+SPGKKAMIYVSPNSG VVHA+S G+APRDE+GR IGPVPQ+L TV+TPNEQQMSKIERNRSEIW QRLERS A REG ELKRSKMAAI  VLPFGKNGFRRRR REHAEAHLME
Sbjct:  246 QKEADLTASSMPTDPELRRKLDIRHAKSNRERDSAAATA-----------ATVGEVADEKFSSXXXXXXXXXXXXXXXXXXXXXSDDGDKTASASEATPASSX---XXXXXXXXXXXXAADPSTRADVGTNPASGASMAEFMTGKARHARTVNDHGKKAVAGGGXEGSSPIPVSNSWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSNRXXNRNSFSPPNEFHDENVLRAERFLFGKLVSPGKKAMIYVSPNSGSVVHAASVGRAPRDEEGREIGPVPQKLMTVLTPNEQQMSKIERNRSEIWAQRLERSKALREGHELKRSKMAAIMSVLPFGKNGFRRRRAREHAEAHLME 609          
BLAST of mRNA_E-siliculosus-1a_F_contig14393.2568.1 vs. uniprot
Match: A0A6H5KH58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH58_9PHAE)

HSP 1 Score: 343 bits (879), Expect = 9.390e-110
Identity = 266/373 (71.31%), Postives = 278/373 (74.53%), Query Frame = 1
Query:    1 QKEADLTATSMPTDPELRRKLDIRHAKSNRERDSAATTAKGISTTNTAPTATVGEVADDKSSSSATTGPKRAAAFSTVVASND-GDDGDKTAAAPEATPALSTPTTXXXXXXXXXXXXXADPSTRADVANNAASGASMAEFMTGKARQARAVNDHGKKAGAGXXXXRSSPTPVSNMWTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFFPPNEFHPENILRSGRFMIGKLLSPGKKAMIYVSPNSGCVVHASSAGKAPRDEKGRAIGPVPQELKTVITPNEQQMSKIERNRSEIWGQRLERSTAAREGRELKRSKMAAITGVLPFGKNGFRRRREREHAEAHLME 1116
            QKEADLTA+SMPTDPELRRKLDIRHAKSNRERDSAA TA           ATVGEVAD+                          DDGDKTA A EAT A ST T    XXXX      ADPSTRADV  N ASGASMAEFMTGKAR AR VNDHGKKA A      SSP P SN WTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX           SF PPNEFH EN+LR+ RF+ GKL+SPGKKAMIYVSPNSG VVHA+S G+ PRDE+GR IGPVPQ+L TV+TPNEQQMSKIERNRSEIW QRLERS A REGRELKRSK+AAI   LPFGKNGFRRRR REHAEAHLME
Sbjct:  235 QKEADLTASSMPTDPELRRKLDIRHAKSNRERDSAAATA-----------ATVGEVADEXXXXXXXXXXXXXXXXXXXXXXXXXSDDGDKTAPASEATLASSTATATPAXXXXGTA---ADPSTRADVGTNPASGASMAEFMTGKARHARTVNDHGKKAVADGGGEGSSPIPASNSWTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNRNRNGN---SFSPPNEFHDENVLRAERFLFGKLVSPGKKAMIYVSPNSGSVVHAASVGRVPRDEEGREIGPVPQKLMTVLTPNEQQMSKIERNRSEIWAQRLERSKALREGRELKRSKVAAIMSALPFGKNGFRRRRAREHAEAHLME 590          
BLAST of mRNA_E-siliculosus-1a_F_contig14393.2568.1 vs. uniprot
Match: D8LNB2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNB2_ECTSI)

HSP 1 Score: 191 bits (486), Expect = 1.520e-56
Identity = 99/108 (91.67%), Postives = 101/108 (93.52%), Query Frame = 1
Query:  793 MIYVSPNSGCVVHASSAGKAPRDEKGRAIGPVPQELKTVITPNEQQMSKIERNRSEIWGQRLERSTAAREGRELKRSKMAAITGVLPFGKNGFRRRREREHAEAHLME 1116
            MIYVSPNSG VVHASSAGKA RDE+GR IGPVPQ+LKTVITPNEQQMSKIERNRSEIW QRLER  AAREG ELKRSKMAAITGVLPFGKNGFRRRREREHAEAHLME
Sbjct:    1 MIYVSPNSGSVVHASSAGKATRDEEGRKIGPVPQKLKTVITPNEQQMSKIERNRSEIWAQRLERGKAAREGGELKRSKMAAITGVLPFGKNGFRRRREREHAEAHLME 108          
BLAST of mRNA_E-siliculosus-1a_F_contig14393.2568.1 vs. uniprot
Match: A0A6H5L4D4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4D4_9PHAE)

HSP 1 Score: 140 bits (354), Expect = 2.260e-34
Identity = 168/372 (45.16%), Postives = 211/372 (56.72%), Query Frame = 1
Query:   31 MPTDPELRRKLDIRHAKSNRERDSAATTAKGISTTNTAPTATVGEVADDKSSSSATTGPKRAAAFSTVVASNDGDDGD-KTAAAPEATPALSTPTTXXXXXXXXXXXXXADPSTRADVANNAASGASMAEFMTGKARQAR----AVNDHGKKAGAGXXXXRSSPTPVS-NMWTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFFP----PNEFHPENILRSGRFMIGKLLSPGKKAMIYVSPNSGCVVHASSAGKAPRDEKGRAIGPVPQELKTVITPNEQQMSKIERNRSEIWGQRLERSTAAREGRELKRSKMAAITGVLPFGKNGFRRRREREHAEAHLME 1116
            MPTDPELR +LDI +A+   + D   T   GI+ +   P  +   V    SS++A+   K   + S+V   +D DDGD K+ AA    PA      XX           A  S  A+V NN A G SMA+ +TGKAR+AR    AVN  G K G G    RS  T +  N WT           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        P    P   HPE     G+ ++ +LL+P + +M Y SP  G V+ A++ G APRD  G   GPV Q  +T++T N ++MSK+   RSE     LE+   AREGR L+  K+A + G +PFGK+GF RRR REH EA++ E
Sbjct:    1 MPTDPELRWRLDIMYARIRMDNDDDVT---GINLSFINPDPSAATVVPKSSSTAASPDRK---SLSSVADPDDSDDGDDKSPAAANIGPAXXXXXXXXGSSQSSAVDPKA--SAPANVGNNPALGMSMADLITGKAREARDVGSAVNVDGDKGGGGG---RSPSTALQHNTWTGSKNKTRNQQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDRSSYTHPGPTVPPRLHPE-----GQVLLARLLNPARTSMAYASPTDGSVILATAIGNAPRDADGNTTGPVTQNNRTLLTANPRKMSKVRALRSENIVAGLEKKRVAREGRTLREGKLATLMGFMPFGKHGFLRRRAREHVEAYMGE 356          
BLAST of mRNA_E-siliculosus-1a_F_contig14393.2568.1 vs. uniprot
Match: D7FTM0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTM0_ECTSI)

HSP 1 Score: 108 bits (271), Expect = 8.240e-25
Identity = 58/108 (53.70%), Postives = 74/108 (68.52%), Query Frame = 1
Query:  793 MIYVSPNSGCVVHASSAGKAPRDEKGRAIGPVPQELKTVITPNEQQMSKIERNRSEIWGQRLERSTAAREGRELKRSKMAAITGVLPFGKNGFRRRREREHAEAHLME 1116
            M+Y +P  G VV A+S G+ PRDE+GRA G +PQ+  T++  NE+ M+K E  RSEI  +RL +  A REGR LK+SKM+   G LPFGK GF  RR R+ AEAHL E
Sbjct:    1 MVYAAPADGSVVFATSTGRVPRDEEGRATGSLPQKRLTLLAANERLMAKAEDFRSEIILRRLVKKNALREGRTLKKSKMSTFMGFLPFGKRGFLHRRARDRAEAHLGE 108          
BLAST of mRNA_E-siliculosus-1a_F_contig14393.2568.1 vs. uniprot
Match: A0A6H5LDV1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDV1_9PHAE)

HSP 1 Score: 105 bits (262), Expect = 2.210e-23
Identity = 59/120 (49.17%), Postives = 76/120 (63.33%), Query Frame = 1
Query:  760 IGKLLSPGKKAMIYVSPNSGCVVHASSAGKAPRDEKGRAIGPVPQELKTVITPNEQQMSKIERNRSEIWGQRLERSTAAREGREL-KRSKMAAITGVLPFGKNGFRRRREREHAEAHLME 1116
            +GKLL+P K +M+Y SP  G V+HA++ GKAP D+     G VP     ++  N ++M      RSEI+   LE+  AA EGREL K  K+  + G LPFGKNGFR RR REHAEAH+ E
Sbjct:    1 MGKLLNPAKTSMLYASPIDGSVIHATANGKAPHDKDDDMTGQVPHGKHVLLKANSRKMLNALGLRSEIFEANLEKRKAALEGRELPKEGKVDTLMGFLPFGKNGFRGRRAREHAEAHMGE 120          
BLAST of mRNA_E-siliculosus-1a_F_contig14393.2568.1 vs. uniprot
Match: A0A6H5JQZ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQZ9_9PHAE)

HSP 1 Score: 105 bits (263), Expect = 2.400e-22
Identity = 58/133 (43.61%), Postives = 81/133 (60.90%), Query Frame = 1
Query:  718 EFHPENILRSGRFMIGKLLSPGKKAMIYVSPNSGCVVHASSAGKAPRDEKGRAIGPVPQELKTVITPNEQQMSKIERNRSEIWGQRLERSTAAREGRELKRSKMAAITGVLPFGKNGFRRRREREHAEAHLME 1116
            +FH + +L  G F+ G+L +  K AM+Y +     VV A++ G  P D + R + P  Q  +T++  N Q+MS +E  ++EI  +  E      EGR LK+SKM A+ G LPFGK+GFRRRR REHA AHL E
Sbjct:  115 QFHSDFVLHVGDFLHGRLPNLAKTAMVYATSIDCFVVRATATGTPPGDLEDRTVDPASQTRRTLLEANTQRMSIVEGLQAEIMAETAEAEKETVEGRGLKKSKMVAVLGFLPFGKHGFRRRRPREHAAAHLGE 247          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig14393.2568.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
D8LNC7_ECTSI1.210e-12974.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LNB6_ECTSI4.550e-12376.34Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KKU9_9PHAE5.140e-11369.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K5J3_9PHAE7.710e-11375.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KH58_9PHAE9.390e-11071.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNB2_ECTSI1.520e-5691.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L4D4_9PHAE2.260e-3445.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTM0_ECTSI8.240e-2553.70Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
A0A6H5LDV1_9PHAE2.210e-2349.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JQZ9_9PHAE2.400e-2243.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig14393contigE-siliculosus-1a_F_contig14393:7..1122 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop0
Cds size1086
Model size1116
Exons1
Hectar predicted targeting categoryother localisation
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927950.079537-UTR-E-siliculosus-1a_F_contig14393:6..361622927950.079537-UTR-E-siliculosus-1a_F_contig14393:6..36Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig14393 7..36 +
1696318750.162175-UTR-E-siliculosus-1a_F_contig14393:6..361696318750.162175-UTR-E-siliculosus-1a_F_contig14393:6..36Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig14393 7..36 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927950.1270583-CDS-E-siliculosus-1a_F_contig14393:36..11221622927950.1270583-CDS-E-siliculosus-1a_F_contig14393:36..1122Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig14393 37..1122 +
1696318750.1717362-CDS-E-siliculosus-1a_F_contig14393:36..11221696318750.1717362-CDS-E-siliculosus-1a_F_contig14393:36..1122Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig14393 37..1122 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig14393.2568.1prot_E-siliculosus-1a_F_contig14393.2568.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig14393 37..1122 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig14393.2568.1

>prot_E-siliculosus-1a_F_contig14393.2568.1 ID=prot_E-siliculosus-1a_F_contig14393.2568.1|Name=mRNA_E-siliculosus-1a_F_contig14393.2568.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=362bp
MPTDPELRRKLDIRHAKSNRERDSAATTAKGISTTNTAPTATVGEVADDK
SSSSATTGPKRAAAFSTVVASNDGDDGDKTAAAPEATPALSTPTTATATP
ATPTTGTAADPSTRADVANNAASGASMAEFMTGKARQARAVNDHGKKAGA
GGGGERSSPTPVSNMWTTPKKARQHRQQQQQQQQQQQQDRRHSKRKDTAG
NNNSNGSSGDNSNGNNNGNNNGNSFFPPNEFHPENILRSGRFMIGKLLSP
GKKAMIYVSPNSGCVVHASSAGKAPRDEKGRAIGPVPQELKTVITPNEQQ
MSKIERNRSEIWGQRLERSTAAREGRELKRSKMAAITGVLPFGKNGFRRR
REREHAEAHLME
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mRNA from alignment at E-siliculosus-1a_F_contig14393:7..1122+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig14393.2568.1 ID=mRNA_E-siliculosus-1a_F_contig14393.2568.1|Name=mRNA_E-siliculosus-1a_F_contig14393.2568.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1116bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig14393:7..1122+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CAGAAGGAGGCCGACCTTACGGCGACGAGCATGCCGACCGACCCTGAGCT TCGCAGGAAGCTGGACATCCGGCATGCCAAGAGCAACAGGGAACGCGACT CCGCCGCCACCACTGCCAAGGGCATATCGACGACCAACACCGCCCCTACC GCTACCGTCGGAGAAGTCGCCGACGACAAGTCCTCCTCCTCCGCAACCAC CGGCCCTAAACGCGCCGCGGCGTTCTCCACTGTTGTTGCTTCCAACGACG GCGATGATGGCGACAAGACCGCCGCTGCACCAGAGGCCACACCGGCCTTA TCTACTCCTACTACTGCCACCGCTACACCTGCGACGCCCACCACAGGAAC TGCTGCCGACCCGAGCACTCGGGCGGACGTTGCCAACAACGCCGCTTCCG GTGCGTCGATGGCCGAGTTCATGACGGGCAAGGCCCGTCAAGCTCGCGCC GTCAACGACCACGGCAAGAAGGCCGGCGCCGGCGGCGGGGGCGAGCGTTC TTCGCCGACTCCCGTGTCGAACATGTGGACCACGCCCAAGAAGGCACGCC AGCACAGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGACCGG CGCCACAGCAAGCGCAAAGATACTGCCGGCAACAACAACAGCAACGGCAG CAGCGGCGACAACAGCAACGGCAACAACAACGGCAACAACAACGGAAACT CGTTCTTCCCGCCGAACGAGTTCCACCCCGAGAACATCTTGCGGTCAGGA AGATTTATGATCGGGAAACTTCTGAGCCCAGGCAAGAAGGCGATGATCTA CGTCTCGCCGAACTCCGGCTGCGTCGTTCACGCCTCGTCCGCCGGAAAAG CACCCCGGGACGAAAAAGGGCGGGCGATCGGTCCCGTACCGCAGGAACTG AAGACTGTTATCACCCCCAACGAGCAGCAGATGTCCAAGATCGAGAGGAA CCGTTCCGAAATCTGGGGGCAGAGGTTGGAGAGAAGTACGGCTGCCCGCG AGGGCCGCGAACTCAAGAGGTCAAAGATGGCCGCCATCACGGGCGTTCTG CCGTTCGGCAAGAACGGCTTCCGCCGGAGGCGAGAGCGCGAGCACGCCGA GGCCCACTTGATGGAG
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig14393:7..1122+

>mRNA_E-siliculosus-1a_F_contig14393.2568.1 ID=mRNA_E-siliculosus-1a_F_contig14393.2568.1|Name=mRNA_E-siliculosus-1a_F_contig14393.2568.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2172bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig14393:7..1122+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGCCGACCGACCCTGAGCTTCGCAGGAAGCTGGACATCCGGCATGCCAA
GAGCAACAGGGAACGCGACTCCGCCGCCACCACTGCCAAGGGCATATCGA
CGACCAACACCGCCCCTACCGCTACCGTCGGAGAAGTCGCCGACGACAAG
TCCTCCTCCTCCGCAACCACCGGCCCTAAACGCGCCGCGGCGTTCTCCAC
TGTTGTTGCTTCCAACGACGGCGATGATGGCGACAAGACCGCCGCTGCAC
CAGAGGCCACACCGGCCTTATCTACTCCTACTACTGCCACCGCTACACCT
GCGACGCCCACCACAGGAACTGCTGCCGACCCGAGCACTCGGGCGGACGT
TGCCAACAACGCCGCTTCCGGTGCGTCGATGGCCGAGTTCATGACGGGCA
AGGCCCGTCAAGCTCGCGCCGTCAACGACCACGGCAAGAAGGCCGGCGCC
GGCGGCGGGGGCGAGCGTTCTTCGCCGACTCCCGTGTCGAACATGTGGAC
CACGCCCAAGAAGGCACGCCAGCACAGGCAGCAGCAGCAGCAGCAGCAGC
AGCAGCAGCAGCAGGACCGGCGCCACAGCAAGCGCAAAGATACTGCCGGC
AACAACAACAGCAACGGCAGCAGCGGCGACAACAGCAACGGCAACAACAA
CGGCAACAACAACGGAAACTCGTTCTTCCCGCCGAACGAGTTCCACCCCG
AGAACATCTTGCGGTCAGGAAGATTTATGATCGGGAAACTTCTGAGCCCA
GGCAAGAAGGCGATGATCTACGTCTCGCCGAACTCCGGCTGCGTCGTTCA
CGCCTCGTCCGCCGGAAAAGCACCCCGGGACGAAAAAGGGCGGGCGATCG
GTCCCGTACCGCAGGAACTGAAGACTGTTATCACCCCCAACGAGCAGCAG
ATGTCCAAGATCGAGAGGAACCGTTCCGAAATCTGGGGGCAGAGGTTGGA
GAGAAGTACGGCTGCCCGCGAGGGCCGCGAACTCAAGAGGTCAAAGATGG
CCGCCATCACGGGCGTTCTGCCGTTCGGCAAGAACGGCTTCCGCCGGAGG
CGAGAGCGCGAGCACGCCGAGGCCCACTTGATGGAGATGCCGACCGACCC
TGAGCTTCGCAGGAAGCTGGACATCCGGCATGCCAAGAGCAACAGGGAAC
GCGACTCCGCCGCCACCACTGCCAAGGGCATATCGACGACCAACACCGCC
CCTACCGCTACCGTCGGAGAAGTCGCCGACGACAAGTCCTCCTCCTCCGC
AACCACCGGCCCTAAACGCGCCGCGGCGTTCTCCACTGTTGTTGCTTCCA
ACGACGGCGATGATGGCGACAAGACCGCCGCTGCACCAGAGGCCACACCG
GCCTTATCTACTCCTACTACTGCCACCGCTACACCTGCGACGCCCACCAC
AGGAACTGCTGCCGACCCGAGCACTCGGGCGGACGTTGCCAACAACGCCG
CTTCCGGTGCGTCGATGGCCGAGTTCATGACGGGCAAGGCCCGTCAAGCT
CGCGCCGTCAACGACCACGGCAAGAAGGCCGGCGCCGGCGGCGGGGGCGA
GCGTTCTTCGCCGACTCCCGTGTCGAACATGTGGACCACGCCCAAGAAGG
CACGCCAGCACAGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG
GACCGGCGCCACAGCAAGCGCAAAGATACTGCCGGCAACAACAACAGCAA
CGGCAGCAGCGGCGACAACAGCAACGGCAACAACAACGGCAACAACAACG
GAAACTCGTTCTTCCCGCCGAACGAGTTCCACCCCGAGAACATCTTGCGG
TCAGGAAGATTTATGATCGGGAAACTTCTGAGCCCAGGCAAGAAGGCGAT
GATCTACGTCTCGCCGAACTCCGGCTGCGTCGTTCACGCCTCGTCCGCCG
GAAAAGCACCCCGGGACGAAAAAGGGCGGGCGATCGGTCCCGTACCGCAG
GAACTGAAGACTGTTATCACCCCCAACGAGCAGCAGATGTCCAAGATCGA
GAGGAACCGTTCCGAAATCTGGGGGCAGAGGTTGGAGAGAAGTACGGCTG
CCCGCGAGGGCCGCGAACTCAAGAGGTCAAAGATGGCCGCCATCACGGGC
GTTCTGCCGTTCGGCAAGAACGGCTTCCGCCGGAGGCGAGAGCGCGAGCA
CGCCGAGGCCCACTTGATGGAG
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