mRNA_E-siliculosus-1a_F_contig14393.2568.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig14393.2568.1 vs. uniprot
Match: D8LNC7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNC7_ECTSI) HSP 1 Score: 395 bits (1014), Expect = 1.210e-129 Identity = 304/409 (74.33%), Postives = 315/409 (77.02%), Query Frame = 1
Query: 1 QKEADLTATSMPTDPELRRKLDIRHAKSNRERDSAATTAKGISTTNTAPTATVGEVADDKSSSSATTGPKRAAAFSTVVASNDGDDGDKTAAAPEATPALSTPTTXXXXXXXXXXXXXADPSTRADVANNAASGASMAEFMTGKARQARAVNDHGKKAGAGXXXXRSSPTPVSNMWTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------------------------------SFFPPNEFHPENILRSGRFMIGKLLSPGKKAMIYVSPNSGCVVHASSAGKAPRDEKGRAIGPVPQELKTVITPNEQQMSKIERNRSEIWGQRLERSTAAREGRELKRSKMAAITGVLPFGKNGFRRRREREHAEAHLME 1116
QKEADLTATSMPTDPELRRKLD RHAKSNRERDSA AK +STTNTAPTATVG+VAD+KSSSSATT P RAAAFSTV ND DDGDKTAAA EATP STP T X XXXXXXXX SMAEFMT KAR+ARAVNDHGKKAGAG RSSP PVSN WTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXX SF PP+EFH EN+LR+GRF+ GKL+SPGKKAMIYVSPNS VVHASSAGKA RDE+GR IGPVPQ+LKTVITPNEQQMSKIERNRSEIW QRLER AAREG ELKRSKMAAITGVLPFGKNGFRRRREREHAEAHLME
Sbjct: 175 QKEADLTATSMPTDPELRRKLDNRHAKSNRERDSATAVAKDMSTTNTAPTATVGDVADNKSSSSATTAPNRAAAFSTVADPNDNDDGDKTAAASEATPTSSTPATAXAAPXXXXXXXXXXXXXXXXXXXXXXXXXSMAEFMTSKAREARAVNDHGKKAGAGGGGERSSPIPVSNTWTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSNXXXXXXXXXXXXXXXYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFSPPDEFHDENVLRAGRFLFGKLMSPGKKAMIYVSPNSSSVVHASSAGKATRDEEGRKIGPVPQKLKTVITPNEQQMSKIERNRSEIWAQRLERGKAAREGGELKRSKMAAITGVLPFGKNGFRRRREREHAEAHLME 583
BLAST of mRNA_E-siliculosus-1a_F_contig14393.2568.1 vs. uniprot
Match: D8LNB6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNB6_ECTSI) HSP 1 Score: 377 bits (968), Expect = 4.550e-123 Identity = 284/372 (76.34%), Postives = 296/372 (79.57%), Query Frame = 1
Query: 1 QKEADLTATSMPTDPELRRKLDIRHAKSNRERDSAATTAKGISTTNTAPTATVGEVADDKSSSSATTGPKRAAAFSTVVASNDGDDGDKTAAAPEATPALSTPTTXXXXXXXXXXXXXADPSTRADVANNAASGASMAEFMTGKARQARAVNDHGKKAGAGXXXXRSSPTPVSNMWTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFFPPNEFHPENILRSGRFMIGKLLSPGKKAMIYVSPNSGCVVHASSAGKAPRDEKGRAIGPVPQELKTVITPNEQQMSKIERNRSEIWGQRLERSTAAREGRELKRSKMAAITGVLPFGKNGFRRRREREHAEAHLME 1116
Q EA+LTATSMPTDPELRR+LDIRHAKSNRERDSAA AK +STTNTAPTATVGEV P RA AFSTV D + XXXXXXXXXX ADPSTRADV NN ASGASMAEFMTGKAR+ARAVNDHGKKAGAG SSP PVSN WTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SF PP+EFH EN+LR+GRF+ GKL+SPGKKAMIYVSPNS VVHASSAGKA RDE+GR IGPVPQ+LKTVITPNEQQMSKIERNRSEIW QRLER AAREG ELKRSKMAAITGVLPFGKNGFRRRREREHAEAHLME
Sbjct: 188 QNEANLTATSMPTDPELRRRLDIRHAKSNRERDSAAAAAKDMSTTNTAPTATVGEVXXXXXXXXXXXXPNRAEAFSTVA---DPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTAADPSTRADVGNNPASGASMAEFMTGKAREARAVNDHGKKAGAGGGGEVSSPIPVSNSWTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHYSNGNTNGNSFSPPDEFHDENVLRAGRFLFGKLMSPGKKAMIYVSPNSSSVVHASSAGKATRDEEGRKIGPVPQKLKTVITPNEQQMSKIERNRSEIWAQRLERGKAAREGGELKRSKMAAITGVLPFGKNGFRRRREREHAEAHLME 556
BLAST of mRNA_E-siliculosus-1a_F_contig14393.2568.1 vs. uniprot
Match: A0A6H5KKU9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKU9_9PHAE) HSP 1 Score: 349 bits (895), Expect = 5.140e-113 Identity = 296/425 (69.65%), Postives = 309/425 (72.71%), Query Frame = 1
Query: 1 QKEADLTATSMPTDPELRRKLDIRHAKSNRERDSAATTAKGISTTNTAPTATVGEVADDKSSSSATT-GPKRAAAFSTVVASNDGDDGDKTAAAPEATPALSTPTTXXXXXXXXXXXXXADPSTRADVA---------------------NNAASGASMAEFMTGKARQARAVNDHGKKAGAGXXXXRSSPTPVSNMWTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------------------------SFFPPNEFHPENILRSGRFMIGKLLSPGKKAMIYVSPNSGCVVHASSAGKAPRDEKGRAIGPVPQELKTVITPNEQQMSKIERNRSEIWGQRLERSTAAREGRELKRSKMAAITGVLPFGKNGFRRRREREHAEAHLME 1116
QKEADLTA+SMPTDPELRRKLDIRHAKSNRERDSAA TAKG+STTNT PTATVGEVADDKSS A ++GDDGD TAAAP+ATPA ST T XXXXXXXX A+P+TRADVA NN ASGASMAEFMTGKARQARAVNDHGKK AG XXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SF PPNEFH EN+LR+ RF+ GKL+ P KKAMIYVSPNSG VVHASSAG+APRDE GR IGPVPQ+L TV PNEQQMSKIERNRSEIW QRL RS A REGRELKRSKMAAI GVLPFGKNGFRRRR REHAEAHLME
Sbjct: 96 QKEADLTASSMPTDPELRRKLDIRHAKSNRERDSAAATAKGMSTTNTVPTATVGEVADDKSSXXXXXXNXXXXXXXXXXXAPDEGDDGDNTAAAPKATPASSTHATAXXXXXXXXAETAANPTTRADVATTSLPVRRYXXXXXXXXXXVGNNPASGASMAEFMTGKARQARAVNDHGKKVVAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSFSPPNEFHDENVLRAERFLFGKLVGPTKKAMIYVSPNSGSVVHASSAGEAPRDEDGRKIGPVPQKLMTVFAPNEQQMSKIERNRSEIWAQRLGRSEALREGRELKRSKMAAIMGVLPFGKNGFRRRRAREHAEAHLME 520
BLAST of mRNA_E-siliculosus-1a_F_contig14393.2568.1 vs. uniprot
Match: A0A6H5K5J3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5J3_9PHAE) HSP 1 Score: 352 bits (904), Expect = 7.710e-113 Identity = 287/378 (75.93%), Postives = 299/378 (79.10%), Query Frame = 1
Query: 1 QKEADLTATSMPTDPELRRKLDIRHAKSNRERDSAATTAKGISTTNTAPTATVGEVADDK-SSSSATTGPKRAAAFSTVVASNDGDDGDKTAAAPEATPALSTPTTXXXXXXXXXXXXXADPSTRADVANNAASGASMAEFMTGKARQARAVNDHGKKAGAGXXXXRSSPTPVSNMWTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----SFFPPNEFHPENILRSGRFMIGKLLSPGKKAMIYVSPNSGCVVHASSAGKAPRDEKGRAIGPVPQELKTVITPNEQQMSKIERNRSEIWGQRLERSTAAREGRELKRSKMAAITGVLPFGKNGFRRRREREHAEAHLME 1116
QKEADLTA+SMPTDPELRRKLDIRHAKSNRERDSAA TA ATVGEVAD+K SS DDGDKTA+A EATPA S XXXXXXXXXXXX ADPSTRADV N ASGASMAEFMTGKAR AR VNDHGKKA AG X SSP PVSN W XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SF PPNEFH EN+LR+ RF+ GKL+SPGKKAMIYVSPNSG VVHA+S G+APRDE+GR IGPVPQ+L TV+TPNEQQMSKIERNRSEIW QRLERS A REG ELKRSKMAAI VLPFGKNGFRRRR REHAEAHLME
Sbjct: 246 QKEADLTASSMPTDPELRRKLDIRHAKSNRERDSAAATA-----------ATVGEVADEKFSSXXXXXXXXXXXXXXXXXXXXXSDDGDKTASASEATPASSX---XXXXXXXXXXXXAADPSTRADVGTNPASGASMAEFMTGKARHARTVNDHGKKAVAGGGXEGSSPIPVSNSWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSNRXXNRNSFSPPNEFHDENVLRAERFLFGKLVSPGKKAMIYVSPNSGSVVHAASVGRAPRDEEGREIGPVPQKLMTVLTPNEQQMSKIERNRSEIWAQRLERSKALREGHELKRSKMAAIMSVLPFGKNGFRRRRAREHAEAHLME 609
BLAST of mRNA_E-siliculosus-1a_F_contig14393.2568.1 vs. uniprot
Match: A0A6H5KH58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH58_9PHAE) HSP 1 Score: 343 bits (879), Expect = 9.390e-110 Identity = 266/373 (71.31%), Postives = 278/373 (74.53%), Query Frame = 1
Query: 1 QKEADLTATSMPTDPELRRKLDIRHAKSNRERDSAATTAKGISTTNTAPTATVGEVADDKSSSSATTGPKRAAAFSTVVASND-GDDGDKTAAAPEATPALSTPTTXXXXXXXXXXXXXADPSTRADVANNAASGASMAEFMTGKARQARAVNDHGKKAGAGXXXXRSSPTPVSNMWTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFFPPNEFHPENILRSGRFMIGKLLSPGKKAMIYVSPNSGCVVHASSAGKAPRDEKGRAIGPVPQELKTVITPNEQQMSKIERNRSEIWGQRLERSTAAREGRELKRSKMAAITGVLPFGKNGFRRRREREHAEAHLME 1116
QKEADLTA+SMPTDPELRRKLDIRHAKSNRERDSAA TA ATVGEVAD+ DDGDKTA A EAT A ST T XXXX ADPSTRADV N ASGASMAEFMTGKAR AR VNDHGKKA A SSP P SN WTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SF PPNEFH EN+LR+ RF+ GKL+SPGKKAMIYVSPNSG VVHA+S G+ PRDE+GR IGPVPQ+L TV+TPNEQQMSKIERNRSEIW QRLERS A REGRELKRSK+AAI LPFGKNGFRRRR REHAEAHLME
Sbjct: 235 QKEADLTASSMPTDPELRRKLDIRHAKSNRERDSAAATA-----------ATVGEVADEXXXXXXXXXXXXXXXXXXXXXXXXXSDDGDKTAPASEATLASSTATATPAXXXXGTA---ADPSTRADVGTNPASGASMAEFMTGKARHARTVNDHGKKAVADGGGEGSSPIPASNSWTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNRNRNGN---SFSPPNEFHDENVLRAERFLFGKLVSPGKKAMIYVSPNSGSVVHAASVGRVPRDEEGREIGPVPQKLMTVLTPNEQQMSKIERNRSEIWAQRLERSKALREGRELKRSKVAAIMSALPFGKNGFRRRRAREHAEAHLME 590
BLAST of mRNA_E-siliculosus-1a_F_contig14393.2568.1 vs. uniprot
Match: D8LNB2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNB2_ECTSI) HSP 1 Score: 191 bits (486), Expect = 1.520e-56 Identity = 99/108 (91.67%), Postives = 101/108 (93.52%), Query Frame = 1
Query: 793 MIYVSPNSGCVVHASSAGKAPRDEKGRAIGPVPQELKTVITPNEQQMSKIERNRSEIWGQRLERSTAAREGRELKRSKMAAITGVLPFGKNGFRRRREREHAEAHLME 1116
MIYVSPNSG VVHASSAGKA RDE+GR IGPVPQ+LKTVITPNEQQMSKIERNRSEIW QRLER AAREG ELKRSKMAAITGVLPFGKNGFRRRREREHAEAHLME
Sbjct: 1 MIYVSPNSGSVVHASSAGKATRDEEGRKIGPVPQKLKTVITPNEQQMSKIERNRSEIWAQRLERGKAAREGGELKRSKMAAITGVLPFGKNGFRRRREREHAEAHLME 108
BLAST of mRNA_E-siliculosus-1a_F_contig14393.2568.1 vs. uniprot
Match: A0A6H5L4D4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4D4_9PHAE) HSP 1 Score: 140 bits (354), Expect = 2.260e-34 Identity = 168/372 (45.16%), Postives = 211/372 (56.72%), Query Frame = 1
Query: 31 MPTDPELRRKLDIRHAKSNRERDSAATTAKGISTTNTAPTATVGEVADDKSSSSATTGPKRAAAFSTVVASNDGDDGD-KTAAAPEATPALSTPTTXXXXXXXXXXXXXADPSTRADVANNAASGASMAEFMTGKARQAR----AVNDHGKKAGAGXXXXRSSPTPVS-NMWTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFFP----PNEFHPENILRSGRFMIGKLLSPGKKAMIYVSPNSGCVVHASSAGKAPRDEKGRAIGPVPQELKTVITPNEQQMSKIERNRSEIWGQRLERSTAAREGRELKRSKMAAITGVLPFGKNGFRRRREREHAEAHLME 1116
MPTDPELR +LDI +A+ + D T GI+ + P + V SS++A+ K + S+V +D DDGD K+ AA PA XX A S A+V NN A G SMA+ +TGKAR+AR AVN G K G G RS T + N WT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX P P HPE G+ ++ +LL+P + +M Y SP G V+ A++ G APRD G GPV Q +T++T N ++MSK+ RSE LE+ AREGR L+ K+A + G +PFGK+GF RRR REH EA++ E
Sbjct: 1 MPTDPELRWRLDIMYARIRMDNDDDVT---GINLSFINPDPSAATVVPKSSSTAASPDRK---SLSSVADPDDSDDGDDKSPAAANIGPAXXXXXXXXGSSQSSAVDPKA--SAPANVGNNPALGMSMADLITGKAREARDVGSAVNVDGDKGGGGG---RSPSTALQHNTWTGSKNKTRNQQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDRSSYTHPGPTVPPRLHPE-----GQVLLARLLNPARTSMAYASPTDGSVILATAIGNAPRDADGNTTGPVTQNNRTLLTANPRKMSKVRALRSENIVAGLEKKRVAREGRTLREGKLATLMGFMPFGKHGFLRRRAREHVEAYMGE 356
BLAST of mRNA_E-siliculosus-1a_F_contig14393.2568.1 vs. uniprot
Match: D7FTM0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTM0_ECTSI) HSP 1 Score: 108 bits (271), Expect = 8.240e-25 Identity = 58/108 (53.70%), Postives = 74/108 (68.52%), Query Frame = 1
Query: 793 MIYVSPNSGCVVHASSAGKAPRDEKGRAIGPVPQELKTVITPNEQQMSKIERNRSEIWGQRLERSTAAREGRELKRSKMAAITGVLPFGKNGFRRRREREHAEAHLME 1116
M+Y +P G VV A+S G+ PRDE+GRA G +PQ+ T++ NE+ M+K E RSEI +RL + A REGR LK+SKM+ G LPFGK GF RR R+ AEAHL E
Sbjct: 1 MVYAAPADGSVVFATSTGRVPRDEEGRATGSLPQKRLTLLAANERLMAKAEDFRSEIILRRLVKKNALREGRTLKKSKMSTFMGFLPFGKRGFLHRRARDRAEAHLGE 108
BLAST of mRNA_E-siliculosus-1a_F_contig14393.2568.1 vs. uniprot
Match: A0A6H5LDV1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDV1_9PHAE) HSP 1 Score: 105 bits (262), Expect = 2.210e-23 Identity = 59/120 (49.17%), Postives = 76/120 (63.33%), Query Frame = 1
Query: 760 IGKLLSPGKKAMIYVSPNSGCVVHASSAGKAPRDEKGRAIGPVPQELKTVITPNEQQMSKIERNRSEIWGQRLERSTAAREGREL-KRSKMAAITGVLPFGKNGFRRRREREHAEAHLME 1116
+GKLL+P K +M+Y SP G V+HA++ GKAP D+ G VP ++ N ++M RSEI+ LE+ AA EGREL K K+ + G LPFGKNGFR RR REHAEAH+ E
Sbjct: 1 MGKLLNPAKTSMLYASPIDGSVIHATANGKAPHDKDDDMTGQVPHGKHVLLKANSRKMLNALGLRSEIFEANLEKRKAALEGRELPKEGKVDTLMGFLPFGKNGFRGRRAREHAEAHMGE 120
BLAST of mRNA_E-siliculosus-1a_F_contig14393.2568.1 vs. uniprot
Match: A0A6H5JQZ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQZ9_9PHAE) HSP 1 Score: 105 bits (263), Expect = 2.400e-22 Identity = 58/133 (43.61%), Postives = 81/133 (60.90%), Query Frame = 1
Query: 718 EFHPENILRSGRFMIGKLLSPGKKAMIYVSPNSGCVVHASSAGKAPRDEKGRAIGPVPQELKTVITPNEQQMSKIERNRSEIWGQRLERSTAAREGRELKRSKMAAITGVLPFGKNGFRRRREREHAEAHLME 1116
+FH + +L G F+ G+L + K AM+Y + VV A++ G P D + R + P Q +T++ N Q+MS +E ++EI + E EGR LK+SKM A+ G LPFGK+GFRRRR REHA AHL E
Sbjct: 115 QFHSDFVLHVGDFLHGRLPNLAKTAMVYATSIDCFVVRATATGTPPGDLEDRTVDPASQTRRTLLEANTQRMSIVEGLQAEIMAETAEAEKETVEGRGLKKSKMVAVLGFLPFGKHGFRRRRPREHAAAHLGE 247 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig14393.2568.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig14393.2568.1 >prot_E-siliculosus-1a_F_contig14393.2568.1 ID=prot_E-siliculosus-1a_F_contig14393.2568.1|Name=mRNA_E-siliculosus-1a_F_contig14393.2568.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=362bp MPTDPELRRKLDIRHAKSNRERDSAATTAKGISTTNTAPTATVGEVADDKback to top mRNA from alignment at E-siliculosus-1a_F_contig14393:7..1122+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig14393.2568.1 ID=mRNA_E-siliculosus-1a_F_contig14393.2568.1|Name=mRNA_E-siliculosus-1a_F_contig14393.2568.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1116bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig14393:7..1122+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig14393:7..1122+ >mRNA_E-siliculosus-1a_F_contig14393.2568.1 ID=mRNA_E-siliculosus-1a_F_contig14393.2568.1|Name=mRNA_E-siliculosus-1a_F_contig14393.2568.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2172bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig14393:7..1122+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |