mRNA_E-siliculosus-1a_F_contig1432.2543.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1432.2543.1 vs. uniprot
Match: D7FI14_ECTSI (SF3b1 domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI14_ECTSI) HSP 1 Score: 712 bits (1839), Expect = 7.080e-251 Identity = 422/422 (100.00%), Postives = 422/422 (100.00%), Query Frame = 1
Query: 205 MANVDEEIKALQKERESGIVATADGEDDGGDGXXXXXXXGQVALTGAGAYDRDIYGGGGDKFAGVSRTVVXXXXXXXXXXXXXXXXXXXXXSHPASRASVNAPRHLLDGGEEREGGDDDNSTIAGMRAGGSGMVNTVIAERESAYQAKGRRNQMISPIRGGDAFAGQTPTRSFRDIMAEQALAKEKDVKRRWDDGGTPVAGGVADGDETPAVGKIVSDWDADVATPVRSSRGFGGGETPGRTPGGXXXXXXXSRWDQTPSRDAQETPVTRRSSRWDQSGGGGVTPMAGGVTPGGVGDTPKAGSKWDDETPRAGGGFGAGETPSGRKKSRWDQTPQAGVTPGQTPVAGAMMTPXXXXXXXXXXXXXXSGMVTPSPNLAQAGLGGAGEPMTPELAQQMRWERELDERNRPLTDEDLDAMFPPAG 1470
MANVDEEIKALQKERESGIVATADGEDDGGDGXXXXXXXGQVALTGAGAYDRDIYGGGGDKFAGVSRTVVXXXXXXXXXXXXXXXXXXXXXSHPASRASVNAPRHLLDGGEEREGGDDDNSTIAGMRAGGSGMVNTVIAERESAYQAKGRRNQMISPIRGGDAFAGQTPTRSFRDIMAEQALAKEKDVKRRWDDGGTPVAGGVADGDETPAVGKIVSDWDADVATPVRSSRGFGGGETPGRTPGGXXXXXXXSRWDQTPSRDAQETPVTRRSSRWDQSGGGGVTPMAGGVTPGGVGDTPKAGSKWDDETPRAGGGFGAGETPSGRKKSRWDQTPQAGVTPGQTPVAGAMMTPXXXXXXXXXXXXXXSGMVTPSPNLAQAGLGGAGEPMTPELAQQMRWERELDERNRPLTDEDLDAMFPPAG
Sbjct: 1 MANVDEEIKALQKERESGIVATADGEDDGGDGXXXXXXXGQVALTGAGAYDRDIYGGGGDKFAGVSRTVVXXXXXXXXXXXXXXXXXXXXXSHPASRASVNAPRHLLDGGEEREGGDDDNSTIAGMRAGGSGMVNTVIAERESAYQAKGRRNQMISPIRGGDAFAGQTPTRSFRDIMAEQALAKEKDVKRRWDDGGTPVAGGVADGDETPAVGKIVSDWDADVATPVRSSRGFGGGETPGRTPGGXXXXXXXSRWDQTPSRDAQETPVTRRSSRWDQSGGGGVTPMAGGVTPGGVGDTPKAGSKWDDETPRAGGGFGAGETPSGRKKSRWDQTPQAGVTPGQTPVAGAMMTPXXXXXXXXXXXXXXSGMVTPSPNLAQAGLGGAGEPMTPELAQQMRWERELDERNRPLTDEDLDAMFPPAG 422
BLAST of mRNA_E-siliculosus-1a_F_contig1432.2543.1 vs. uniprot
Match: A0A6H5JJ74_9PHAE (TOG domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ74_9PHAE) HSP 1 Score: 674 bits (1739), Expect = 9.160e-228 Identity = 416/484 (85.95%), Postives = 417/484 (86.16%), Query Frame = 1
Query: 205 MANVDEEIKALQKERESGIVATADGEDDGGDGXXXXXXXGQVALTGAGAYDRDIYGGGGDKFAGVSRTVVXXXXXXXXXXXXXXXXXXXXXSHPASRASVNAPRHLLDGGEEREGGDDDNSTIAGMRAGGSGMVNTVIAERESAYQAKGRRNQMISPIRGGDAFAGQTPTRSFRDIMAEQALAKEKDVKRR--------------------------------------------------------------WDDGGTPVAGGVADGDETPAVGKIVSDWDADVATPVRSSRGFGGGETPGRTPGGXXXXXXXSRWDQTPSRDAQETPVTRRSSRWDQSGGGGVTPMAGGVTPGGVGDTPKAGSKWDDETPRAGGGFGAGETPSGRKKSRWDQTPQAGVTPGQTPVAGAMMTPXXXXXXXXXXXXXXSGMVTPSPNLAQAGLGGAGEPMTPELAQQMRWERELDERNRPLTDEDLDAMFPPAG 1470
MANVDEEIKALQKERESGIVA ADGEDDGGD XXXXXXXGQVALTGAGAYDRDIYGGGGDKFAGVSRTVV XXXXXXXXXXXXXXXXXXXXSHPASRASVNAPRHLLDGGEEREGGDDDNSTIAGMRAGGSGMVNTVIAERESAYQAKGRRNQMISPIRGGDAFAGQTPTRSFRDIMAEQALAKEKDV R WDDGGTPVAGGVADGDETPAVGKIVSDWDADVATPVRSSRGFGGGETPGRTPGGXXXXXXXSRWDQTPSRDAQETPVTRRSSRWDQSGGGGVTPMAGG+TPGGVGDTPKAGSKWDDETPRAGGGFGAGETPSGRKKSRWDQTPQAGVTPGQTPVAGAMMTPXXXXXXXXXXXXXXSGMVTPSPNLAQAGLGGAGEPMTPELAQQMRWERELDERNRPLTDEDLDAMFPPAG
Sbjct: 1 MANVDEEIKALQKERESGIVAAADGEDDGGDXXXXXXXXGQVALTGAGAYDRDIYGGGGDKFAGVSRTVVEXXXXXXXXXXXXXXXXXXXXSHPASRASVNAPRHLLDGGEEREGGDDDNSTIAGMRAGGSGMVNTVIAERESAYQAKGRRNQMISPIRGGDAFAGQTPTRSFRDIMAEQALAKEKDVIMRKAAKQAEEAASLKRSVPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWDDGGTPVAGGVADGDETPAVGKIVSDWDADVATPVRSSRGFGGGETPGRTPGGXXXXXXXSRWDQTPSRDAQETPVTRRSSRWDQSGGGGVTPMAGGITPGGVGDTPKAGSKWDDETPRAGGGFGAGETPSGRKKSRWDQTPQAGVTPGQTPVAGAMMTPXXXXXXXXXXXXXXSGMVTPSPNLAQAGLGGAGEPMTPELAQQMRWERELDERNRPLTDEDLDAMFPPAG 484
BLAST of mRNA_E-siliculosus-1a_F_contig1432.2543.1 vs. uniprot
Match: A0A835Z3L3_9STRA (Splicing factor 3B subunit 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3L3_9STRA) HSP 1 Score: 152 bits (384), Expect = 9.700e-36 Identity = 154/447 (34.45%), Postives = 199/447 (44.52%), Query Frame = 1
Query: 325 QVALTGAGAYDRDIYGGGGDKFAGVSRTVVXXXXXXXXXXXXXXXXXXXXXSHPASRASVNAPRHLLDGGEEREGGDDDNSTIAGMR-AGGSGMVNTVIAERESAYQAKGRRNQMISPIRGGDAFAGQTPTRSFRDIMAEQALAKEKDV------------------------------------------------KRRWDDGGTPVAGGVADGDETPAVGKIVSDWDADVATPVRSSRGFGGGETPGRTPGGXXXXXXXSRWDQTPSRDAQETPVTRRSSRWDQSGGGGVTPMAGGVTPGGVGDTPKAGSKWDDETPRAGGGFGAGETPSGRKKSRWDQTPQAGVTP---------------GQTPVAGAMMTPXXXXXXXXXXXXXXSGMVTPSPN-LAQAGLGGAGEPMTPELAQQMRWERELDERNRPLTDEDLDAMFPPAG 1470
+V L G +D DIYGGG DKFAG S +V SHP++R ++ P L E GG+D + A R +GGSG+VNT I++RE+ Y A+ RRN+++SP RG DAF+G+TP RS++DIM Q L ++K+ +RRWD+ + TP + S WDA+ TP GG SRWDQTP R + G + G TP+A S+WDD TP+AGG G + TP G TP G + MTP XXXXXXXX GM TP+P +A A A EPMTPELAQ+MRWERE++ERNRP+TDE+LDA+FP AG
Sbjct: 32 KVGLLSVGGFDTDIYGGG-DKFAGFSSAIVDEQEEADGDTEVISHIGAA--SHPSTRMAI--PAKAL----EAAGGEDASDPFAQYRESGGSGLVNTRISDRETDYHAR-RRNRLLSPDRG-DAFSGKTPARSYKDIMINQDLDRQKEELLAAARKKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKRRRWDES-----------EATPVMKPSASGWDAE--TPXXXXXXXXXXXXXXXXAGGK------SRWDQTPVRGDGAAAALGGAXXXXXXXXXXXXXXXGADS----GATPRA-SRWDDATPKAGGAGGV------------EATPGVGATPXXXXXXXXXXXXMVGGVRATSLIGMTPGGAMTXXXXXXXX--GMATPTPGAIAAAQAAAAQEPMTPELAQRMRWEREVEERNRPMTDEELDALFPDAG 429
BLAST of mRNA_E-siliculosus-1a_F_contig1432.2543.1 vs. uniprot
Match: UPI0019D68D7C (splicing factor 3B subunit 1-like n=1 Tax=Panicum virgatum TaxID=38727 RepID=UPI0019D68D7C) HSP 1 Score: 122 bits (306), Expect = 9.290e-26 Identity = 135/433 (31.18%), Postives = 173/433 (39.95%), Query Frame = 1
Query: 352 YDRDIYGGGG---DKFAGVSRTVVXXXXXXXXXXXXXXXXXXXXXSHPASRASVNAPRHLLDGGEEREGGDDDNSTIAGMRAGGSGMVNTVIAERESAYQAKGRRNQMISPIRGGDAFAGQ-TP---TRSFRDIMAEQALAKEKDV--------------------------------KRRWDDGGTPVAGGVADGDETPAVGKIVSDWDADVATPVRSSRGFGGGETPGRTPGGXXXXXXXSRWDQTPSRDAQETPVTRRSSRWDQSGGGG------VTPMAGGVTPGGVGDTPKAGSKWDDETPRAGGGFGAGETPSGRKKSRWDQTPQ---------------AGVTPGQTPVAGAMMTPXXXXXXXXXXXXXXSGMVTPSPNLAQAGLGGAGEPMTPELAQQMRWERELDERNRPLTDEDLDAMFPPAG 1470
+D D+YGGGG ++FAG ++ ++PA R H + + DDD GG + I +RE Y+ + R NQ+ISP R AG+ TP R++ D+M + AL K+K+ + RWD AG A K SDWDA ATP G G RWD TP R TP RR+ RWD++ G TP AGGVTPG TP WD TP+ GG TP +++SRWD+TP AG TPG TP + TP+P+ G PMTPE Q MRWER+++ERNRPLTDE+LDAMFP G
Sbjct: 35 FDTDLYGGGGADPNRFAGYDTSI--------PASEDDAAEEDTEAANPAPRRLAAYTGHAIAAADLPRSADDD---------GGLPKRSQRIIDREDDYRRR-RLNQIISPERHDPFAAGEATPDPSVRTYADVMRDAALQKKKEDLLREIAXXXXXXXXXXXXXXXXXXXXXXXXXRRNRWDQSQDSDAGAGA------KKAKTSSDWDAPDATP-----GIG-------------------RWDATPGRVGDATPSVRRN-RWDETPTPGRMADADATPAAGGVTPGA---TPSG--AWD-ATPKLPGGVTP--TPGKKQRSRWDETPASMGSAXXGGLGAATPAGYTPGPTPFGA-------------------ENLATPTPSQIARG------PMTPEQYQLMRWERDIEERNRPLTDEELDAMFPQEG 385
BLAST of mRNA_E-siliculosus-1a_F_contig1432.2543.1 vs. uniprot
Match: K3YPC2_SETIT (TOG domain-containing protein n=6 Tax=Setaria TaxID=4554 RepID=K3YPC2_SETIT) HSP 1 Score: 120 bits (300), Expect = 5.350e-25 Identity = 147/481 (30.56%), Postives = 188/481 (39.09%), Query Frame = 1
Query: 211 NVDEEIKALQKERESGIVATADGEDDGGDGXXXXXXXGQVALTGAGAYDRDIYGGGG---DKFAGVSRTVVXXXXXXXXXXXXXXXXXXXXXSHPASRASVNAPRHLLDGGEEREGGDDDNSTIAGMRAGGSGMVNTVIAERESAYQAKGRRNQMISPIRGGDAFAGQ-TP---TRSFRDIMAEQALAKEK-DVKR--------------------------------RWDDGGTPVAGGVADGDETPAVGKIVSDWDADVATPVRSSRGFGGGETPGRTPGGXXXXXXXSRWDQTPSRDAQETPVTRRSSRWDQSGGGG------VTPMAGGVTPGGVGDTPKAGSKWDDETPRAGGGFGAGETPSGRKKSRWDQTPQ---------------AGVTPGQTPVAGAMMTPXXXXXXXXXXXXXXSGMVTPSPNLAQAGLGGAGEPMTPELAQQMRWERELDERNRPLTDEDLDAMFPPAG 1470
+VD EI Q+ER A A G +A++ +D D+YGGGG ++FAG ++ ++PA R H + + DDD R I +RE Y+ + R NQ+ISP R AG+ TP R++ D+M + ALAK+K D+ R RWD A A K SDWDA ATP G G RWD TP R TP RR+ RWD++ G TP AGGVTPG TP WD TP+ GG TP +++SRWD+TP AG TPG TP + TP+P+ G PMTPE Q MRWER+++ERNRPLTDE+LDAMFP G
Sbjct: 2 DVDAEISRTQEERRKLEEALAAGA--------------PMAVSSV-TFDTDLYGGGGADPNRFAGYDTSI--------PASEDDAAEDDTEAANPAPRRLAAYTGHAIAAADLPRSADDDALPKRSQR----------IIDREDDYRRR-RLNQIISPERHDPFAAGEATPDPSVRTYADVMRDAALAKKKEDLMREIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRWDQSQDSDAAAGA------KKAKTSSDWDAPDATP-----GIG-------------------RWDATPGRVGDATPSVRRN-RWDETPTPGRMADADATPAAGGVTPGA---TPSG--AWD-ATPKLPGGVTP--TPGKKQRSRWDETPASMGSAXXGGLGAATPAGYTPGPTPFGA-------------------ENLATPTPSQIARG------PMTPEQYQLMRWERDIEERNRPLTDEELDAMFPQEG 384
BLAST of mRNA_E-siliculosus-1a_F_contig1432.2543.1 vs. uniprot
Match: A0A3L6EY90_MAIZE (Splicing factor 3B subunit 1 n=3 Tax=Magnoliopsida TaxID=3398 RepID=A0A3L6EY90_MAIZE) HSP 1 Score: 119 bits (299), Expect = 8.240e-25 Identity = 128/400 (32.00%), Postives = 164/400 (41.00%), Query Frame = 1
Query: 352 YDRDIYGGGG---DKFAGVSRTVVXXXXXXXXXXXXXXXXXXXXXSHPASRASVNAPRHLLDGGEEREGGDDDNSTIAGMRAGGSGMVNTVIAERESAYQAKGRRNQMISPIRGGDAFAGQ-TPTRSFRDIMAEQALAKEKDVKRRWDDGGTPVAGGVADGDETPAV--GKIVSDWDADVATPVRSSRGFGGGETPGRTPGGXXXXXXXSRWDQTPSRDAQETPVTRRSSRWDQSGGGG------VTPMAGGVTPGGVGDTPKAGSKWDDETPRAGGGFGAGETPSGRKKSRWDQTPQA---------------GVTPGQTPVAGAMMTPXXXXXXXXXXXXXXSGMVTPSPNLAQAGLGGAGEPMTPELAQQMRWERELDERNRPLTDEDLDAMFPPAG 1470
+D D+YGGGG ++FAG ++ ++PA R H + + DDD+ G + I +RE Y+ + R NQ+ISP R AG+ TP S R A K ++ RWD DGD K SDWDA ATP G G RWD TP R TP RR+ RWD++ G TP AGG TPG TP WD TP+ GG TP +++SRWD+TP + G TPG TP + TP+P+ G P+TPE Q MRWER+++ERNRPLTDE+LDAMFP G
Sbjct: 8 FDTDLYGGGGADPNRFAGYDTSI--------PASEDDAAEDDTELANPAPRRLAAYTGHAIAAADLPRSADDDD---------GLPKRSQRIIDREDDYRRR-RLNQIISPERHDPFAAGEATPDPSVRTYADPAAATKRRN---RWDQS--------QDGDAASGAKKAKTSSDWDAPDATP-----GIG-------------------RWDATPGRVGDATPSVRRN-RWDETPTPGRMADADATPAAGGATPGA---TPSG--AWD-ATPKLPGGVTP--TPGKKQRSRWDETPASMGSAXXGGLGAATPVGYTPGPTPFGA-------------------ENLATPTPSQIARG------PITPEQYQLMRWERDIEERNRPLTDEELDAMFPQEG 320
BLAST of mRNA_E-siliculosus-1a_F_contig1432.2543.1 vs. uniprot
Match: A0A2P4X7D7_9STRA (Splicing factor 3B subunit 1 (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X7D7_9STRA) HSP 1 Score: 117 bits (293), Expect = 1.720e-24 Identity = 141/397 (35.52%), Postives = 177/397 (44.58%), Query Frame = 1
Query: 328 VALTGAGAYDRDIYGGGG-DKFAGVSRTVVXXXXXXXXXXXXXXXXXXXXXSHPASRASVNAPRHLLDGGEEREGGDDDNSTIAGMR-AGGSGMVNTVIAERESAYQAKGRRNQMISPIRGGDAFAGQTPTRSFRDIMAEQALAKE------KDVKRRWDDGGTPVAGGVADGDETPAVGKIVSDWDADVATPVRSSRGFGGGETPGRTPGGXXXXXXXSRWDQTPSRDAQETPVT--RRSSRWDQSGGGGVTPMAGGVTPGGVGDTPKAGSKWDDETPRAGGGFGAGETPSGRKKSRWDQTPQ--AGVTPGQTPVAGAMMTPXXXXXXXXXXXXXXSGMVTPSPNLAQAGLGGAGEPM----TPELAQQMRWERELDERNRPLTDEDLDAMFPPAG 1470
V+L+ G +D+DIYG G D+FAG S TV H S+ + AP DG DD+ A R A GSG+VNT I +RE+AY+ K R +M+SP RG DAF +TP RS+++IM Q L +E K ++R D D TP + WD + T T G T S WD T R SSRWD TP+AG VG TP + + G S+WD TP G TP T XXXXXXXXXXXXS M TP NL G + M TPELAQ++RWERE+++RNRP+TDE+LDA+FP G
Sbjct: 10 VSLSSTGQFDQDIYGSSGTDRFAGYSATVTEEGDEDEQQTEDH---------HSRSKNTSKAPHQGGDGLI-----DDNYDPFAEAREANGSGLVNTRIVDRENAYR-KRRFERMLSPERG-DAFGDKTPARSYKEIMQTQQLEQERAEVVRKIQQKREXXXXXXXXXXXXDVDATPKRRRKRMRWDQEGPT------------TDGET---------QSEWDTASESSVSSVAATPTRGSSRWD------ATPVAGST----VGATPGRKNXXXXXXXASSG------------TSKWDATPVNLGGATPVGT-----------XXXXXXXXXXXXSDMATPGKNLQMTPGGSMTDIMSGALTPELAQRLRWEREIEDRNRPMTDEELDALFPATG 336
BLAST of mRNA_E-siliculosus-1a_F_contig1432.2543.1 vs. uniprot
Match: F0W6T1_9STRA (Uncharacterized protein AlNc14C26G2567 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W6T1_9STRA) HSP 1 Score: 117 bits (294), Expect = 3.020e-24 Identity = 134/421 (31.83%), Postives = 174/421 (41.33%), Query Frame = 1
Query: 325 QVALTGAGAYDRDIYGGGGDKFAGVSRTVVXXXXXXXXXXXXXXXXXXXXXSHPASRASVNAPRHLLDGGEEREGGDDDNSTIAGMRA-GGSGMVNTVIAERESAYQAKGRRNQMISPIRGGDAFAGQTPTRSFRDIMAEQALAKE------------------------------KDVKRRWDDGGTPVAGGVADGDETPAVGKIVSDWDADVATPVRSSRGFGGGETPGRTPGGXXXXXXXSRWDQTPSRDAQETPVTRRSSRWDQSGGGGVTPMAGGVTPGGVGDTPKAGSK------WDDETPRAGGGFGAGETPSGRKKSRWDQTPQAGVTPGQTPVAGAMMTPXXXXXXXXXXXXXXS--GMVTPSPNLAQAGLGGAGEPMTPELAQQMRWERELDERNRPLTDEDLDAMFPPAG 1470
+V LT G YD+DIYG D G T+ H A A + + L +G D+D+ A +A GSG+VNT I +RE++Y+ K R ++++SP R D F G+TP RS++DIM Q L E K K RWDD G+ G+ D T V SS G WD S A+++ + R SSRWD VTP+AGG SK WD ETP +S+WDQT + TP+ G XXXXXXX G +TPS + L GA MTPE+AQ++RWERE++ERNRPL DE+LD MFP G
Sbjct: 8 RVGLTSKGQYDQDIYGTN-DDLEGFDHTL----------------GPEEDKEHNAKNAKSSDKQKLTEGLV-----DEDHDPFADAQAENGSGVVNTRIIDRENSYR-KRRFDRILSPERS-DVFDGKTPQRSYKDIMQSQQLEAERAEVIRKIQKQQEEQSANEKLEXXTGNEKVKKRKMRWDDPGSATGSGI------------------DAKTDVESSSG----------------------WDTDESSMAEDSNLGR-SSRWD------VTPLAGGQEGSXXXXXXATKSKGEKIGRWD-------------ETPKASSESKWDQTTVTPIANMMTPLGGTSKRSXXXXXXXSSNDIATPQRGQMTPSGAITNDLLTGA---MTPEMAQRLRWEREIEERNRPLADEELDTMFPSTG 341
BLAST of mRNA_E-siliculosus-1a_F_contig1432.2543.1 vs. uniprot
Match: A0A662WMW2_9STRA (SF3b1 domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WMW2_9STRA) HSP 1 Score: 117 bits (294), Expect = 3.070e-24 Identity = 135/388 (34.79%), Postives = 173/388 (44.59%), Query Frame = 1
Query: 328 VALTGAGAYDRDIYGGGGDKFAGVSRTVVXXXXXXXXXXXXXXXXXXXXXSHPASRASVNAPRHLLDGGEEREGGDDDNSTIAGMR-AGGSGMVNTVIAERESAYQAKGRRNQMISPIRGGDAFAGQTPTRSFRDIMAEQALAKEK-DVKRRWD---DGGTPVAGGVADGDETPAVGKIVSDWDADVATPVRSSRGFGGGETPGRTPGGXXXXXXXSRWDQTPSRDAQETPVTRRSSRWDQSGGGGVTPMAGGVTPGGVGDTPKAGSKWDDETPRAGGGFGAGETPSGRKKSRWDQTP--QAGVTPGQTPVAGAMMTPXXXXXXXXXXXXXXSGMVTPSPNLAQAGLGGAGEPMTPELAQQMRWERELDERNRPLTDEDLDAMFPPAG 1470
VALT AGA+D++IYG GGD+FAG S T+ ASR++ + GG+ DD A R A GSG+VNT I +RE++Y+ K R ++M+SP RG DAF G+TP RS++DIM Q L E+ +V R+ + + VA + G DA + XXXXXXX TP TR SSRWD TP AGS R SG S+WD TP GVTP XXXX +TP ++A + GA +TPELAQ+MRWERE++ERNRPL DE+LDA+FP G
Sbjct: 38 VALTAAGAFDQEIYGAGGDRFAGYSATIADEGDDAEEKEGDETA---------ASRSTTTTNKVATQGGDGLI--DDSYDPFAEAREANGSGLVNTRIVDRENSYR-KRRFDRMLSPERG-DAFGGKTPARSYKDIMQGQQLDMERAEVVRKIQQKREEEAELQEQVAKTQQAQISGAAGETGDATPKRRRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTP-TRTSSRWDA--------------------TPVAGSAAAATPMRKXXXXXXXXXRSGSSSSKWDATPVNMGGVTPAAGSGKXXXXXXXXXXGGNDMATPRKGVQMTPGGSMAADIMSGA---LTPELAQRMRWEREIEERNRPLADEELDALFPATG 388
BLAST of mRNA_E-siliculosus-1a_F_contig1432.2543.1 vs. uniprot
Match: H3G976_PHYRM (SF3b1 domain-containing protein n=20 Tax=Peronosporaceae TaxID=4777 RepID=H3G976_PHYRM) HSP 1 Score: 116 bits (290), Expect = 9.640e-24 Identity = 122/392 (31.12%), Postives = 164/392 (41.84%), Query Frame = 1
Query: 328 VALTGAGAYDRDIYGG-GGDKFAGVSRTVVXXXXXXXXXXXXXXXXXXXXXSHPASRASVNAPRHLLDGGEEREGGDDDNSTIAGMRAGGSGMVNTVIAERESAYQAKGRRNQMISPIRGGDAFAGQTPTRSFRDIMAEQALAKEK-DVKRRWDD---GGTPVAGGVADGDETPAVGKIVSDWDADVATPVRSSRGFGGGETPGRTPGGXXXXXXXSRWDQTPSRDAQETPVTRRSSRWDQSGGGGVTPMAGGVTPG------GVGDTPKAGSKWDDETPRAGGGFGAGETPSGRKKSRWDQTPQAGVTPGQTPVAGAMMTPXXXXXXXXXXXXXXSGMVTPSPNLAQAGLGGAGEPMTPELAQQMRWERELDERNRPLTDEDLDAMFPPAG 1470
V L+ G +D+DIYG GG++FAG S TV S P A L+D ++ + + GSG+VNT I +RE++Y+ K R +M+SP RG DAF +TPTRS+++IM Q L +E+ +V R+ + D TP + WD + A P + G S WD + +R SSRWD TP+A TPG SKWD GG AG P TPG+ S +TP ++A + GA +TPELAQ+MRWERE++ERNRPLTDE+LDAMFP G
Sbjct: 10 VGLSSTGQFDQDIYGAAGGERFAGYSATVTEEEDVDASAEDHR--------SRPKPVAMQGGGDGLID--------ENYDPFAEARESNGSGLVNTRIVDRENSYR-KRRFERMLSPERG-DAFGDETPTRSYKEIMQTQQLQQERAEVVRKIQQQRXXXXXXXXXXQEVDVTPKRRRKRMRWDQE-APPAEKTDG-----------------ESQSEWDTASESSSAAATPSRTSSRWD------ATPVA--ATPGKKNXXXXXXXXSTESSKWDATPVNLGGVTPAGTXXXXXXXXXXXSGPSDMATPGK------------------------SVQMTPGGSVAAGMMSGA---LTPELAQRMRWEREIEERNRPLTDEELDAMFPATG 330 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1432.2543.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1432.2543.1 >prot_E-siliculosus-1a_F_contig1432.2543.1 ID=prot_E-siliculosus-1a_F_contig1432.2543.1|Name=mRNA_E-siliculosus-1a_F_contig1432.2543.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=422bp MANVDEEIKALQKERESGIVATADGEDDGGDGGEGDGADGQVALTGAGAYback to top mRNA from alignment at E-siliculosus-1a_F_contig1432:28521..32751+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1432.2543.1 ID=mRNA_E-siliculosus-1a_F_contig1432.2543.1|Name=mRNA_E-siliculosus-1a_F_contig1432.2543.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=4231bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1432:28521..32751+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1432:28521..32751+ >mRNA_E-siliculosus-1a_F_contig1432.2543.1 ID=mRNA_E-siliculosus-1a_F_contig1432.2543.1|Name=mRNA_E-siliculosus-1a_F_contig1432.2543.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2532bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1432:28521..32751+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |