mRNA_E-siliculosus-1a_F_contig1432.2543.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1432.2543.1
Unique NamemRNA_E-siliculosus-1a_F_contig1432.2543.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1432.2543.1 vs. uniprot
Match: D7FI14_ECTSI (SF3b1 domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI14_ECTSI)

HSP 1 Score: 712 bits (1839), Expect = 7.080e-251
Identity = 422/422 (100.00%), Postives = 422/422 (100.00%), Query Frame = 1
Query:  205 MANVDEEIKALQKERESGIVATADGEDDGGDGXXXXXXXGQVALTGAGAYDRDIYGGGGDKFAGVSRTVVXXXXXXXXXXXXXXXXXXXXXSHPASRASVNAPRHLLDGGEEREGGDDDNSTIAGMRAGGSGMVNTVIAERESAYQAKGRRNQMISPIRGGDAFAGQTPTRSFRDIMAEQALAKEKDVKRRWDDGGTPVAGGVADGDETPAVGKIVSDWDADVATPVRSSRGFGGGETPGRTPGGXXXXXXXSRWDQTPSRDAQETPVTRRSSRWDQSGGGGVTPMAGGVTPGGVGDTPKAGSKWDDETPRAGGGFGAGETPSGRKKSRWDQTPQAGVTPGQTPVAGAMMTPXXXXXXXXXXXXXXSGMVTPSPNLAQAGLGGAGEPMTPELAQQMRWERELDERNRPLTDEDLDAMFPPAG 1470
            MANVDEEIKALQKERESGIVATADGEDDGGDGXXXXXXXGQVALTGAGAYDRDIYGGGGDKFAGVSRTVVXXXXXXXXXXXXXXXXXXXXXSHPASRASVNAPRHLLDGGEEREGGDDDNSTIAGMRAGGSGMVNTVIAERESAYQAKGRRNQMISPIRGGDAFAGQTPTRSFRDIMAEQALAKEKDVKRRWDDGGTPVAGGVADGDETPAVGKIVSDWDADVATPVRSSRGFGGGETPGRTPGGXXXXXXXSRWDQTPSRDAQETPVTRRSSRWDQSGGGGVTPMAGGVTPGGVGDTPKAGSKWDDETPRAGGGFGAGETPSGRKKSRWDQTPQAGVTPGQTPVAGAMMTPXXXXXXXXXXXXXXSGMVTPSPNLAQAGLGGAGEPMTPELAQQMRWERELDERNRPLTDEDLDAMFPPAG
Sbjct:    1 MANVDEEIKALQKERESGIVATADGEDDGGDGXXXXXXXGQVALTGAGAYDRDIYGGGGDKFAGVSRTVVXXXXXXXXXXXXXXXXXXXXXSHPASRASVNAPRHLLDGGEEREGGDDDNSTIAGMRAGGSGMVNTVIAERESAYQAKGRRNQMISPIRGGDAFAGQTPTRSFRDIMAEQALAKEKDVKRRWDDGGTPVAGGVADGDETPAVGKIVSDWDADVATPVRSSRGFGGGETPGRTPGGXXXXXXXSRWDQTPSRDAQETPVTRRSSRWDQSGGGGVTPMAGGVTPGGVGDTPKAGSKWDDETPRAGGGFGAGETPSGRKKSRWDQTPQAGVTPGQTPVAGAMMTPXXXXXXXXXXXXXXSGMVTPSPNLAQAGLGGAGEPMTPELAQQMRWERELDERNRPLTDEDLDAMFPPAG 422          
BLAST of mRNA_E-siliculosus-1a_F_contig1432.2543.1 vs. uniprot
Match: A0A6H5JJ74_9PHAE (TOG domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ74_9PHAE)

HSP 1 Score: 674 bits (1739), Expect = 9.160e-228
Identity = 416/484 (85.95%), Postives = 417/484 (86.16%), Query Frame = 1
Query:  205 MANVDEEIKALQKERESGIVATADGEDDGGDGXXXXXXXGQVALTGAGAYDRDIYGGGGDKFAGVSRTVVXXXXXXXXXXXXXXXXXXXXXSHPASRASVNAPRHLLDGGEEREGGDDDNSTIAGMRAGGSGMVNTVIAERESAYQAKGRRNQMISPIRGGDAFAGQTPTRSFRDIMAEQALAKEKDVKRR--------------------------------------------------------------WDDGGTPVAGGVADGDETPAVGKIVSDWDADVATPVRSSRGFGGGETPGRTPGGXXXXXXXSRWDQTPSRDAQETPVTRRSSRWDQSGGGGVTPMAGGVTPGGVGDTPKAGSKWDDETPRAGGGFGAGETPSGRKKSRWDQTPQAGVTPGQTPVAGAMMTPXXXXXXXXXXXXXXSGMVTPSPNLAQAGLGGAGEPMTPELAQQMRWERELDERNRPLTDEDLDAMFPPAG 1470
            MANVDEEIKALQKERESGIVA ADGEDDGGD XXXXXXXGQVALTGAGAYDRDIYGGGGDKFAGVSRTVV XXXXXXXXXXXXXXXXXXXXSHPASRASVNAPRHLLDGGEEREGGDDDNSTIAGMRAGGSGMVNTVIAERESAYQAKGRRNQMISPIRGGDAFAGQTPTRSFRDIMAEQALAKEKDV  R                                                              WDDGGTPVAGGVADGDETPAVGKIVSDWDADVATPVRSSRGFGGGETPGRTPGGXXXXXXXSRWDQTPSRDAQETPVTRRSSRWDQSGGGGVTPMAGG+TPGGVGDTPKAGSKWDDETPRAGGGFGAGETPSGRKKSRWDQTPQAGVTPGQTPVAGAMMTPXXXXXXXXXXXXXXSGMVTPSPNLAQAGLGGAGEPMTPELAQQMRWERELDERNRPLTDEDLDAMFPPAG
Sbjct:    1 MANVDEEIKALQKERESGIVAAADGEDDGGDXXXXXXXXGQVALTGAGAYDRDIYGGGGDKFAGVSRTVVEXXXXXXXXXXXXXXXXXXXXSHPASRASVNAPRHLLDGGEEREGGDDDNSTIAGMRAGGSGMVNTVIAERESAYQAKGRRNQMISPIRGGDAFAGQTPTRSFRDIMAEQALAKEKDVIMRKAAKQAEEAASLKRSVPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWDDGGTPVAGGVADGDETPAVGKIVSDWDADVATPVRSSRGFGGGETPGRTPGGXXXXXXXSRWDQTPSRDAQETPVTRRSSRWDQSGGGGVTPMAGGITPGGVGDTPKAGSKWDDETPRAGGGFGAGETPSGRKKSRWDQTPQAGVTPGQTPVAGAMMTPXXXXXXXXXXXXXXSGMVTPSPNLAQAGLGGAGEPMTPELAQQMRWERELDERNRPLTDEDLDAMFPPAG 484          
BLAST of mRNA_E-siliculosus-1a_F_contig1432.2543.1 vs. uniprot
Match: A0A835Z3L3_9STRA (Splicing factor 3B subunit 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3L3_9STRA)

HSP 1 Score: 152 bits (384), Expect = 9.700e-36
Identity = 154/447 (34.45%), Postives = 199/447 (44.52%), Query Frame = 1
Query:  325 QVALTGAGAYDRDIYGGGGDKFAGVSRTVVXXXXXXXXXXXXXXXXXXXXXSHPASRASVNAPRHLLDGGEEREGGDDDNSTIAGMR-AGGSGMVNTVIAERESAYQAKGRRNQMISPIRGGDAFAGQTPTRSFRDIMAEQALAKEKDV------------------------------------------------KRRWDDGGTPVAGGVADGDETPAVGKIVSDWDADVATPVRSSRGFGGGETPGRTPGGXXXXXXXSRWDQTPSRDAQETPVTRRSSRWDQSGGGGVTPMAGGVTPGGVGDTPKAGSKWDDETPRAGGGFGAGETPSGRKKSRWDQTPQAGVTP---------------GQTPVAGAMMTPXXXXXXXXXXXXXXSGMVTPSPN-LAQAGLGGAGEPMTPELAQQMRWERELDERNRPLTDEDLDAMFPPAG 1470
            +V L   G +D DIYGGG DKFAG S  +V                     SHP++R ++  P   L    E  GG+D +   A  R +GGSG+VNT I++RE+ Y A+ RRN+++SP RG DAF+G+TP RS++DIM  Q L ++K+                                                 +RRWD+            + TP +    S WDA+  TP                 GG       SRWDQTP R          +               G  +    G TP+A S+WDD TP+AGG  G             + TP  G TP               G    +   MTP     XXXXXXXX  GM TP+P  +A A    A EPMTPELAQ+MRWERE++ERNRP+TDE+LDA+FP AG
Sbjct:   32 KVGLLSVGGFDTDIYGGG-DKFAGFSSAIVDEQEEADGDTEVISHIGAA--SHPSTRMAI--PAKAL----EAAGGEDASDPFAQYRESGGSGLVNTRISDRETDYHAR-RRNRLLSPDRG-DAFSGKTPARSYKDIMINQDLDRQKEELLAAARKKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKRRRWDES-----------EATPVMKPSASGWDAE--TPXXXXXXXXXXXXXXXXAGGK------SRWDQTPVRGDGAAAALGGAXXXXXXXXXXXXXXXGADS----GATPRA-SRWDDATPKAGGAGGV------------EATPGVGATPXXXXXXXXXXXXMVGGVRATSLIGMTPGGAMTXXXXXXXX--GMATPTPGAIAAAQAAAAQEPMTPELAQRMRWEREVEERNRPMTDEELDALFPDAG 429          
BLAST of mRNA_E-siliculosus-1a_F_contig1432.2543.1 vs. uniprot
Match: UPI0019D68D7C (splicing factor 3B subunit 1-like n=1 Tax=Panicum virgatum TaxID=38727 RepID=UPI0019D68D7C)

HSP 1 Score: 122 bits (306), Expect = 9.290e-26
Identity = 135/433 (31.18%), Postives = 173/433 (39.95%), Query Frame = 1
Query:  352 YDRDIYGGGG---DKFAGVSRTVVXXXXXXXXXXXXXXXXXXXXXSHPASRASVNAPRHLLDGGEEREGGDDDNSTIAGMRAGGSGMVNTVIAERESAYQAKGRRNQMISPIRGGDAFAGQ-TP---TRSFRDIMAEQALAKEKDV--------------------------------KRRWDDGGTPVAGGVADGDETPAVGKIVSDWDADVATPVRSSRGFGGGETPGRTPGGXXXXXXXSRWDQTPSRDAQETPVTRRSSRWDQSGGGG------VTPMAGGVTPGGVGDTPKAGSKWDDETPRAGGGFGAGETPSGRKKSRWDQTPQ---------------AGVTPGQTPVAGAMMTPXXXXXXXXXXXXXXSGMVTPSPNLAQAGLGGAGEPMTPELAQQMRWERELDERNRPLTDEDLDAMFPPAG 1470
            +D D+YGGGG   ++FAG   ++                      ++PA R       H +   +     DDD         GG    +  I +RE  Y+ + R NQ+ISP R     AG+ TP    R++ D+M + AL K+K+                                 + RWD      AG  A         K  SDWDA  ATP     G G                   RWD TP R    TP  RR+ RWD++   G       TP AGGVTPG    TP     WD  TP+  GG     TP  +++SRWD+TP                AG TPG TP                        + TP+P+    G      PMTPE  Q MRWER+++ERNRPLTDE+LDAMFP  G
Sbjct:   35 FDTDLYGGGGADPNRFAGYDTSI--------PASEDDAAEEDTEAANPAPRRLAAYTGHAIAAADLPRSADDD---------GGLPKRSQRIIDREDDYRRR-RLNQIISPERHDPFAAGEATPDPSVRTYADVMRDAALQKKKEDLLREIAXXXXXXXXXXXXXXXXXXXXXXXXXRRNRWDQSQDSDAGAGA------KKAKTSSDWDAPDATP-----GIG-------------------RWDATPGRVGDATPSVRRN-RWDETPTPGRMADADATPAAGGVTPGA---TPSG--AWD-ATPKLPGGVTP--TPGKKQRSRWDETPASMGSAXXGGLGAATPAGYTPGPTPFGA-------------------ENLATPTPSQIARG------PMTPEQYQLMRWERDIEERNRPLTDEELDAMFPQEG 385          
BLAST of mRNA_E-siliculosus-1a_F_contig1432.2543.1 vs. uniprot
Match: K3YPC2_SETIT (TOG domain-containing protein n=6 Tax=Setaria TaxID=4554 RepID=K3YPC2_SETIT)

HSP 1 Score: 120 bits (300), Expect = 5.350e-25
Identity = 147/481 (30.56%), Postives = 188/481 (39.09%), Query Frame = 1
Query:  211 NVDEEIKALQKERESGIVATADGEDDGGDGXXXXXXXGQVALTGAGAYDRDIYGGGG---DKFAGVSRTVVXXXXXXXXXXXXXXXXXXXXXSHPASRASVNAPRHLLDGGEEREGGDDDNSTIAGMRAGGSGMVNTVIAERESAYQAKGRRNQMISPIRGGDAFAGQ-TP---TRSFRDIMAEQALAKEK-DVKR--------------------------------RWDDGGTPVAGGVADGDETPAVGKIVSDWDADVATPVRSSRGFGGGETPGRTPGGXXXXXXXSRWDQTPSRDAQETPVTRRSSRWDQSGGGG------VTPMAGGVTPGGVGDTPKAGSKWDDETPRAGGGFGAGETPSGRKKSRWDQTPQ---------------AGVTPGQTPVAGAMMTPXXXXXXXXXXXXXXSGMVTPSPNLAQAGLGGAGEPMTPELAQQMRWERELDERNRPLTDEDLDAMFPPAG 1470
            +VD EI   Q+ER     A A G                +A++    +D D+YGGGG   ++FAG   ++                      ++PA R       H +   +     DDD       R          I +RE  Y+ + R NQ+ISP R     AG+ TP    R++ D+M + ALAK+K D+ R                                RWD      A   A         K  SDWDA  ATP     G G                   RWD TP R    TP  RR+ RWD++   G       TP AGGVTPG    TP     WD  TP+  GG     TP  +++SRWD+TP                AG TPG TP                        + TP+P+    G      PMTPE  Q MRWER+++ERNRPLTDE+LDAMFP  G
Sbjct:    2 DVDAEISRTQEERRKLEEALAAGA--------------PMAVSSV-TFDTDLYGGGGADPNRFAGYDTSI--------PASEDDAAEDDTEAANPAPRRLAAYTGHAIAAADLPRSADDDALPKRSQR----------IIDREDDYRRR-RLNQIISPERHDPFAAGEATPDPSVRTYADVMRDAALAKKKEDLMREIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRWDQSQDSDAAAGA------KKAKTSSDWDAPDATP-----GIG-------------------RWDATPGRVGDATPSVRRN-RWDETPTPGRMADADATPAAGGVTPGA---TPSG--AWD-ATPKLPGGVTP--TPGKKQRSRWDETPASMGSAXXGGLGAATPAGYTPGPTPFGA-------------------ENLATPTPSQIARG------PMTPEQYQLMRWERDIEERNRPLTDEELDAMFPQEG 384          
BLAST of mRNA_E-siliculosus-1a_F_contig1432.2543.1 vs. uniprot
Match: A0A3L6EY90_MAIZE (Splicing factor 3B subunit 1 n=3 Tax=Magnoliopsida TaxID=3398 RepID=A0A3L6EY90_MAIZE)

HSP 1 Score: 119 bits (299), Expect = 8.240e-25
Identity = 128/400 (32.00%), Postives = 164/400 (41.00%), Query Frame = 1
Query:  352 YDRDIYGGGG---DKFAGVSRTVVXXXXXXXXXXXXXXXXXXXXXSHPASRASVNAPRHLLDGGEEREGGDDDNSTIAGMRAGGSGMVNTVIAERESAYQAKGRRNQMISPIRGGDAFAGQ-TPTRSFRDIMAEQALAKEKDVKRRWDDGGTPVAGGVADGDETPAV--GKIVSDWDADVATPVRSSRGFGGGETPGRTPGGXXXXXXXSRWDQTPSRDAQETPVTRRSSRWDQSGGGG------VTPMAGGVTPGGVGDTPKAGSKWDDETPRAGGGFGAGETPSGRKKSRWDQTPQA---------------GVTPGQTPVAGAMMTPXXXXXXXXXXXXXXSGMVTPSPNLAQAGLGGAGEPMTPELAQQMRWERELDERNRPLTDEDLDAMFPPAG 1470
            +D D+YGGGG   ++FAG   ++                      ++PA R       H +   +     DDD+         G    +  I +RE  Y+ + R NQ+ISP R     AG+ TP  S R      A  K ++   RWD           DGD        K  SDWDA  ATP     G G                   RWD TP R    TP  RR+ RWD++   G       TP AGG TPG    TP     WD  TP+  GG     TP  +++SRWD+TP +               G TPG TP                        + TP+P+    G      P+TPE  Q MRWER+++ERNRPLTDE+LDAMFP  G
Sbjct:    8 FDTDLYGGGGADPNRFAGYDTSI--------PASEDDAAEDDTELANPAPRRLAAYTGHAIAAADLPRSADDDD---------GLPKRSQRIIDREDDYRRR-RLNQIISPERHDPFAAGEATPDPSVRTYADPAAATKRRN---RWDQS--------QDGDAASGAKKAKTSSDWDAPDATP-----GIG-------------------RWDATPGRVGDATPSVRRN-RWDETPTPGRMADADATPAAGGATPGA---TPSG--AWD-ATPKLPGGVTP--TPGKKQRSRWDETPASMGSAXXGGLGAATPVGYTPGPTPFGA-------------------ENLATPTPSQIARG------PITPEQYQLMRWERDIEERNRPLTDEELDAMFPQEG 320          
BLAST of mRNA_E-siliculosus-1a_F_contig1432.2543.1 vs. uniprot
Match: A0A2P4X7D7_9STRA (Splicing factor 3B subunit 1 (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X7D7_9STRA)

HSP 1 Score: 117 bits (293), Expect = 1.720e-24
Identity = 141/397 (35.52%), Postives = 177/397 (44.58%), Query Frame = 1
Query:  328 VALTGAGAYDRDIYGGGG-DKFAGVSRTVVXXXXXXXXXXXXXXXXXXXXXSHPASRASVNAPRHLLDGGEEREGGDDDNSTIAGMR-AGGSGMVNTVIAERESAYQAKGRRNQMISPIRGGDAFAGQTPTRSFRDIMAEQALAKE------KDVKRRWDDGGTPVAGGVADGDETPAVGKIVSDWDADVATPVRSSRGFGGGETPGRTPGGXXXXXXXSRWDQTPSRDAQETPVT--RRSSRWDQSGGGGVTPMAGGVTPGGVGDTPKAGSKWDDETPRAGGGFGAGETPSGRKKSRWDQTPQ--AGVTPGQTPVAGAMMTPXXXXXXXXXXXXXXSGMVTPSPNLAQAGLGGAGEPM----TPELAQQMRWERELDERNRPLTDEDLDAMFPPAG 1470
            V+L+  G +D+DIYG  G D+FAG S TV                       H  S+ +  AP    DG       DD+    A  R A GSG+VNT I +RE+AY+ K R  +M+SP RG DAF  +TP RS+++IM  Q L +E      K  ++R             D D TP   +    WD +  T            T G T          S WD            T  R SSRWD       TP+AG      VG TP   +        + G             S+WD TP    G TP  T           XXXXXXXXXXXXS M TP  NL     G   + M    TPELAQ++RWERE+++RNRP+TDE+LDA+FP  G
Sbjct:   10 VSLSSTGQFDQDIYGSSGTDRFAGYSATVTEEGDEDEQQTEDH---------HSRSKNTSKAPHQGGDGLI-----DDNYDPFAEAREANGSGLVNTRIVDRENAYR-KRRFERMLSPERG-DAFGDKTPARSYKEIMQTQQLEQERAEVVRKIQQKREXXXXXXXXXXXXDVDATPKRRRKRMRWDQEGPT------------TDGET---------QSEWDTASESSVSSVAATPTRGSSRWD------ATPVAGST----VGATPGRKNXXXXXXXASSG------------TSKWDATPVNLGGATPVGT-----------XXXXXXXXXXXXSDMATPGKNLQMTPGGSMTDIMSGALTPELAQRLRWEREIEDRNRPMTDEELDALFPATG 336          
BLAST of mRNA_E-siliculosus-1a_F_contig1432.2543.1 vs. uniprot
Match: F0W6T1_9STRA (Uncharacterized protein AlNc14C26G2567 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W6T1_9STRA)

HSP 1 Score: 117 bits (294), Expect = 3.020e-24
Identity = 134/421 (31.83%), Postives = 174/421 (41.33%), Query Frame = 1
Query:  325 QVALTGAGAYDRDIYGGGGDKFAGVSRTVVXXXXXXXXXXXXXXXXXXXXXSHPASRASVNAPRHLLDGGEEREGGDDDNSTIAGMRA-GGSGMVNTVIAERESAYQAKGRRNQMISPIRGGDAFAGQTPTRSFRDIMAEQALAKE------------------------------KDVKRRWDDGGTPVAGGVADGDETPAVGKIVSDWDADVATPVRSSRGFGGGETPGRTPGGXXXXXXXSRWDQTPSRDAQETPVTRRSSRWDQSGGGGVTPMAGGVTPGGVGDTPKAGSK------WDDETPRAGGGFGAGETPSGRKKSRWDQTPQAGVTPGQTPVAGAMMTPXXXXXXXXXXXXXXS--GMVTPSPNLAQAGLGGAGEPMTPELAQQMRWERELDERNRPLTDEDLDAMFPPAG 1470
            +V LT  G YD+DIYG   D   G   T+                       H A  A  +  + L +G       D+D+   A  +A  GSG+VNT I +RE++Y+ K R ++++SP R  D F G+TP RS++DIM  Q L  E                              K  K RWDD G+    G+                  D  T V SS G                      WD   S  A+++ + R SSRWD      VTP+AGG             SK      WD             ETP    +S+WDQT    +    TP+ G     XXXXXXX          G +TPS  +    L GA   MTPE+AQ++RWERE++ERNRPL DE+LD MFP  G
Sbjct:    8 RVGLTSKGQYDQDIYGTN-DDLEGFDHTL----------------GPEEDKEHNAKNAKSSDKQKLTEGLV-----DEDHDPFADAQAENGSGVVNTRIIDRENSYR-KRRFDRILSPERS-DVFDGKTPQRSYKDIMQSQQLEAERAEVIRKIQKQQEEQSANEKLEXXTGNEKVKKRKMRWDDPGSATGSGI------------------DAKTDVESSSG----------------------WDTDESSMAEDSNLGR-SSRWD------VTPLAGGQEGSXXXXXXATKSKGEKIGRWD-------------ETPKASSESKWDQTTVTPIANMMTPLGGTSKRSXXXXXXXSSNDIATPQRGQMTPSGAITNDLLTGA---MTPEMAQRLRWEREIEERNRPLADEELDTMFPSTG 341          
BLAST of mRNA_E-siliculosus-1a_F_contig1432.2543.1 vs. uniprot
Match: A0A662WMW2_9STRA (SF3b1 domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WMW2_9STRA)

HSP 1 Score: 117 bits (294), Expect = 3.070e-24
Identity = 135/388 (34.79%), Postives = 173/388 (44.59%), Query Frame = 1
Query:  328 VALTGAGAYDRDIYGGGGDKFAGVSRTVVXXXXXXXXXXXXXXXXXXXXXSHPASRASVNAPRHLLDGGEEREGGDDDNSTIAGMR-AGGSGMVNTVIAERESAYQAKGRRNQMISPIRGGDAFAGQTPTRSFRDIMAEQALAKEK-DVKRRWD---DGGTPVAGGVADGDETPAVGKIVSDWDADVATPVRSSRGFGGGETPGRTPGGXXXXXXXSRWDQTPSRDAQETPVTRRSSRWDQSGGGGVTPMAGGVTPGGVGDTPKAGSKWDDETPRAGGGFGAGETPSGRKKSRWDQTP--QAGVTPGQTPVAGAMMTPXXXXXXXXXXXXXXSGMVTPSPNLAQAGLGGAGEPMTPELAQQMRWERELDERNRPLTDEDLDAMFPPAG 1470
            VALT AGA+D++IYG GGD+FAG S T+                         ASR++    +    GG+     DD     A  R A GSG+VNT I +RE++Y+ K R ++M+SP RG DAF G+TP RS++DIM  Q L  E+ +V R+     +    +   VA   +    G      DA      +                 XXXXXXX             TP TR SSRWD                     TP AGS       R           SG   S+WD TP    GVTP            XXXX             +TP  ++A   + GA   +TPELAQ+MRWERE++ERNRPL DE+LDA+FP  G
Sbjct:   38 VALTAAGAFDQEIYGAGGDRFAGYSATIADEGDDAEEKEGDETA---------ASRSTTTTNKVATQGGDGLI--DDSYDPFAEAREANGSGLVNTRIVDRENSYR-KRRFDRMLSPERG-DAFGGKTPARSYKDIMQGQQLDMERAEVVRKIQQKREEEAELQEQVAKTQQAQISGAAGETGDATPKRRRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTP-TRTSSRWDA--------------------TPVAGSAAAATPMRKXXXXXXXXXRSGSSSSKWDATPVNMGGVTPAAGSGKXXXXXXXXXXGGNDMATPRKGVQMTPGGSMAADIMSGA---LTPELAQRMRWEREIEERNRPLADEELDALFPATG 388          
BLAST of mRNA_E-siliculosus-1a_F_contig1432.2543.1 vs. uniprot
Match: H3G976_PHYRM (SF3b1 domain-containing protein n=20 Tax=Peronosporaceae TaxID=4777 RepID=H3G976_PHYRM)

HSP 1 Score: 116 bits (290), Expect = 9.640e-24
Identity = 122/392 (31.12%), Postives = 164/392 (41.84%), Query Frame = 1
Query:  328 VALTGAGAYDRDIYGG-GGDKFAGVSRTVVXXXXXXXXXXXXXXXXXXXXXSHPASRASVNAPRHLLDGGEEREGGDDDNSTIAGMRAGGSGMVNTVIAERESAYQAKGRRNQMISPIRGGDAFAGQTPTRSFRDIMAEQALAKEK-DVKRRWDD---GGTPVAGGVADGDETPAVGKIVSDWDADVATPVRSSRGFGGGETPGRTPGGXXXXXXXSRWDQTPSRDAQETPVTRRSSRWDQSGGGGVTPMAGGVTPG------GVGDTPKAGSKWDDETPRAGGGFGAGETPSGRKKSRWDQTPQAGVTPGQTPVAGAMMTPXXXXXXXXXXXXXXSGMVTPSPNLAQAGLGGAGEPMTPELAQQMRWERELDERNRPLTDEDLDAMFPPAG 1470
            V L+  G +D+DIYG  GG++FAG S TV                      S P   A       L+D        ++ +       + GSG+VNT I +RE++Y+ K R  +M+SP RG DAF  +TPTRS+++IM  Q L +E+ +V R+                + D TP   +    WD + A P   + G                    S WD      +     +R SSRWD       TP+A   TPG               SKWD      GG   AG              P    TPG+                        S  +TP  ++A   + GA   +TPELAQ+MRWERE++ERNRPLTDE+LDAMFP  G
Sbjct:   10 VGLSSTGQFDQDIYGAAGGERFAGYSATVTEEEDVDASAEDHR--------SRPKPVAMQGGGDGLID--------ENYDPFAEARESNGSGLVNTRIVDRENSYR-KRRFERMLSPERG-DAFGDETPTRSYKEIMQTQQLQQERAEVVRKIQQQRXXXXXXXXXXQEVDVTPKRRRKRMRWDQE-APPAEKTDG-----------------ESQSEWDTASESSSAAATPSRTSSRWD------ATPVA--ATPGKKNXXXXXXXXSTESSKWDATPVNLGGVTPAGTXXXXXXXXXXXSGPSDMATPGK------------------------SVQMTPGGSVAAGMMSGA---LTPELAQRMRWEREIEERNRPLTDEELDAMFPATG 330          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1432.2543.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FI14_ECTSI7.080e-251100.00SF3b1 domain-containing protein (Fragment) n=1 Tax... [more]
A0A6H5JJ74_9PHAE9.160e-22885.95TOG domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835Z3L3_9STRA9.700e-3634.45Splicing factor 3B subunit 1 n=1 Tax=Tribonema min... [more]
UPI0019D68D7C9.290e-2631.18splicing factor 3B subunit 1-like n=1 Tax=Panicum ... [more]
K3YPC2_SETIT5.350e-2530.56TOG domain-containing protein n=6 Tax=Setaria TaxI... [more]
A0A3L6EY90_MAIZE8.240e-2532.00Splicing factor 3B subunit 1 n=3 Tax=Magnoliopsida... [more]
A0A2P4X7D7_9STRA1.720e-2435.52Splicing factor 3B subunit 1 (Fragment) n=1 Tax=Ph... [more]
F0W6T1_9STRA3.020e-2431.83Uncharacterized protein AlNc14C26G2567 n=1 Tax=Alb... [more]
A0A662WMW2_9STRA3.070e-2434.79SF3b1 domain-containing protein n=2 Tax=Nothophyto... [more]
H3G976_PHYRM9.640e-2431.12SF3b1 domain-containing protein n=20 Tax=Peronospo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1432contigE-siliculosus-1a_F_contig1432:28521..32751 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop0
Cds size1266
Model size1470
Exons5
Ec32 orthologEc-12_006680.1
Ec32 ortholog descriptionSplicing factor 3B subunit 1
Hectar predicted targeting categoryother localisation
BRITEko00000,ko00001,ko00002,ko03036,ko03041
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.A
Ec32 orthologEc-12_006680.2
EggNOG OGsCOG5181@1,KOG0213@2759
EggNOG free text desc.spliceosomal complex assembly
GOsGO:0000245,GO:0000375,GO:0000377,GO:0000398,GO:0000785,GO:0001701,GO:0001824,GO:0001825,GO:0003002,GO:0003674,GO:0003676,GO:0003682,GO:0003723,GO:0003729,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005684,GO:0005686,GO:0005689,GO:0005694,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0007275,GO:0007389,GO:0008150,GO:0008152,GO:0008380,GO:0009653,GO:0009790,GO:0009792,GO:0009892,GO:0009893,GO:0009952,GO:0009987,GO:0010467,GO:0010468,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0016043,GO:0016070,GO:0016071,GO:0016363,GO:0016604,GO:0016607,GO:0019222,GO:0022607,GO:0022613,GO:0022618,GO:0030532,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032991,GO:0034399,GO:0034622,GO:0034641,GO:0034693,GO:0040029,GO:0043009,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0045815,GO:0046483,GO:0048518,GO:0048519,GO:0048646,GO:0048856,GO:0050789,GO:0060255,GO:0065003,GO:0065007,GO:0070013,GO:0071004,GO:0071005,GO:0071010,GO:0071011,GO:0071013,GO:0071014,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:0097525,GO:0120114,GO:1901360,GO:1901363,GO:1902494,GO:1990904
KEGG ModuleM00352
KEGG Pathwayko03040,map03040
KEGG koko:K12828
Preferred nameSF3B1
Seed eggNOG ortholog2880.D7FI14
Seed ortholog evalue1.2e-206
Seed ortholog score725.7
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1432.2543.1prot_E-siliculosus-1a_F_contig1432.2543.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1432 28725..32751 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927946.8865535-UTR-E-siliculosus-1a_F_contig1432:28520..287241622927946.8865535-UTR-E-siliculosus-1a_F_contig1432:28520..28724Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1432 28521..28724 +
1696318748.6079645-UTR-E-siliculosus-1a_F_contig1432:28520..287241696318748.6079645-UTR-E-siliculosus-1a_F_contig1432:28520..28724Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1432 28521..28724 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927946.9002821-CDS-E-siliculosus-1a_F_contig1432:28724..289151622927946.9002821-CDS-E-siliculosus-1a_F_contig1432:28724..28915Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1432 28725..28915 +
1696318748.6205442-CDS-E-siliculosus-1a_F_contig1432:28724..289151696318748.6205442-CDS-E-siliculosus-1a_F_contig1432:28724..28915Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1432 28725..28915 +
1622927946.9132383-CDS-E-siliculosus-1a_F_contig1432:29974..302451622927946.9132383-CDS-E-siliculosus-1a_F_contig1432:29974..30245Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1432 29975..30245 +
1696318748.6282916-CDS-E-siliculosus-1a_F_contig1432:29974..302451696318748.6282916-CDS-E-siliculosus-1a_F_contig1432:29974..30245Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1432 29975..30245 +
1622927946.9502406-CDS-E-siliculosus-1a_F_contig1432:30934..310361622927946.9502406-CDS-E-siliculosus-1a_F_contig1432:30934..31036Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1432 30935..31036 +
1696318748.636545-CDS-E-siliculosus-1a_F_contig1432:30934..310361696318748.636545-CDS-E-siliculosus-1a_F_contig1432:30934..31036Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1432 30935..31036 +
1622927946.9669313-CDS-E-siliculosus-1a_F_contig1432:31504..319361622927946.9669313-CDS-E-siliculosus-1a_F_contig1432:31504..31936Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1432 31505..31936 +
1696318748.645455-CDS-E-siliculosus-1a_F_contig1432:31504..319361696318748.645455-CDS-E-siliculosus-1a_F_contig1432:31504..31936Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1432 31505..31936 +
1622927946.9887702-CDS-E-siliculosus-1a_F_contig1432:32481..327511622927946.9887702-CDS-E-siliculosus-1a_F_contig1432:32481..32751Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1432 32482..32751 +
1696318748.6547272-CDS-E-siliculosus-1a_F_contig1432:32481..327511696318748.6547272-CDS-E-siliculosus-1a_F_contig1432:32481..32751Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1432 32482..32751 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1432.2543.1

>prot_E-siliculosus-1a_F_contig1432.2543.1 ID=prot_E-siliculosus-1a_F_contig1432.2543.1|Name=mRNA_E-siliculosus-1a_F_contig1432.2543.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=422bp
MANVDEEIKALQKERESGIVATADGEDDGGDGGEGDGADGQVALTGAGAY
DRDIYGGGGDKFAGVSRTVVEEEEPEDEDEVVTSHRGGGGASHPASRASV
NAPRHLLDGGEEREGGDDDNSTIAGMRAGGSGMVNTVIAERESAYQAKGR
RNQMISPIRGGDAFAGQTPTRSFRDIMAEQALAKEKDVKRRWDDGGTPVA
GGVADGDETPAVGKIVSDWDADVATPVRSSRGFGGGETPGRTPGGGGETP
GRSRWDQTPSRDAQETPVTRRSSRWDQSGGGGVTPMAGGVTPGGVGDTPK
AGSKWDDETPRAGGGFGAGETPSGRKKSRWDQTPQAGVTPGQTPVAGAMM
TPGATPSAGWTPGQTPSGMVTPSPNLAQAGLGGAGEPMTPELAQQMRWER
ELDERNRPLTDEDLDAMFPPAG
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mRNA from alignment at E-siliculosus-1a_F_contig1432:28521..32751+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1432.2543.1 ID=mRNA_E-siliculosus-1a_F_contig1432.2543.1|Name=mRNA_E-siliculosus-1a_F_contig1432.2543.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=4231bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1432:28521..32751+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GCCCACGGCGCTGCTTTGAATCACGACATCTCGTAGGGCCGGGGTGCTCT CGGATCTAGGAAGCCGGCCGTTCCCCCTAACAATCGACAAAGGCCTGCAG GAGCAAAAGCTGCCGGCTTCACACGCGGCAAGTGGTTCGAAACTCGCGCG CGAAGCTGCTGCTGCTGTAGGGGAGCACGAACACCAGCACCGGCAGGCAA CATCATGGCTAACGTTGACGAGGAGATAAAGGCACTCCAGAAGGAGCGGG AGAGCGGGATCGTGGCAACGGCGGACGGCGAGGATGACGGCGGGGACGGG GGGGAGGGGGATGGCGCCGACGGCCAGGTGGCGCTCACGGGGGCGGGCGC CTACGATCGAGACATCTACGGCGGCGGCGGCGACAAGTTTGCCGGGTGAG CACAGCAGTGGGAGGGAAGGATCGATCGGAGATGGGTCGCACGTATTTTG CAGGGCGACCCGAAACACCCGTTTTGCAAAAGCTTTGCTACGGATGCAGA GGACGGCGAGTGCCACACGGGATAGATGAATACACGCAATGTTGCAAAGT CTCCAAAGATATTATATTTTTTGTGCTCCCCGGAAGAGATACAACCAACC CTGCTGCTGGCTTGTTTCCTGACGTAACCAATGCTGCCGCCAGCGCGTGA GGCGCACCTTCTCATTGGCGTGGAAACAATTATCTCCGAGTTCCTGCCTG TATGGTTTGCCCCGGACGTCTTTTGTTTCAGCTTTGTGTGGTAGTACATA TTCCTCAAAGCCTACTTCGTGCCTGGTGGATTGTGCAATGCTTGTAAGGC TTCCCAAGCGACGCTGAAATCACGGAGCCCCCCCCCTCGTCGTCAGCACC TCTCCTTCTCTTTCCAGTGCCTGCTGACGGCTTGTGATAGTGATGGTTTA CCGCGAATCTGTTGAACGATACGTCGCTGTCTTATTTTATTGCTTCGAAG TATATTCGGCGAGGAACAGCGTGCCATATACACAAGGAAATGTGCATGAA AGCGTTCTGCTGTAAGCCCCGCCCTCACCTCAGAGTACCCTCGGCTGATT GTGTACAACACCACCTCTCTTTTGATGCTCCTCCGTACATGAACTTACAT CACCCCCGCTGCCAGCAAACCGACATAGGTAACAAAGGCTGGAGAAACAA GCACCAAAAAGAACAACGAGATAACGACAGCAACCGAATCCGAGCTCTTG GGCGGCACCGTACGTGTATCCCCCTCCCGCCCCCCATACCCACACTCCAC CACCTCCTGAAAACAATGAATAAACCCTCTCCCCCGTTTGCTTTCTCCAA CAACAACAACCCACAACAACAGAGTCTCCCAAGCGGTGGTAGACAAAGAA GAGCCCGAACGAAGCACGTGGCCACCCCCCCCCTCCACCACCCATGTACT GAAAAATGAAAACATCTTCTCTCCCCTGTTGCTTTGCTCCAACGACAACA ACAGAGTCTCCCGAACGGTCGTGGAGGAAGAAGAGCCCGAGGACGAGGAC GAGGTCGTCACGAGCCACCGCGGCGGCGGCGGCGCCTCGCACCCGGCCTC CCGTGCAAGCGTCAACGCTCCCCGGCACCTGCTCGACGGCGGCGAGGAGA GGGAGGGCGGCGACGACGACAACAGCACTATCGCGGGCATGCGGGCCGGG GGGTCCGGGATGGTGAACACGGTCATCGCGGAGCGAGAGTCGGCGTACCA GGCGAAGGGTCGCCGGAACCAGATGGTGCGCTTGTTGGGGGGGGGTCGGG GTGAGGTCTTGGGGGAGAAGGCGTGGAGGGGGAGTGTACTCATGTAAACG CATGCCGTGTTAGTCGTTACGGGAGACCATTGACCTACCATCCCTGCAAT GCTGGGACGGAGCGATACGCGGGGTGTTCGCCGGCCCAGGCTACGACGAG GACGTGAAAGGGGTGGGGGGGGGGGGGGGATGGTAATGGGTTGGGGTCAG CGGGGTTGTTGTTGTGCCTGCATACAGGCGTTTTACCGAGTGTGGACGCC TACCGTGACCTTGTGAGTGGTTTCCACTTGCTCTTGTGGGACCGGCTGAT CTCGTTCCTCCACGCTATGTTTGGATGCCTGACTTGTAGAAGTACACATT ACCTCTCGCTCGTGAGAAAGTCGTGTTGCCAGGAACGTCTACAGCGACAC TCTCTGAAAACGAACAACGAAAGTGGTGTGGAAAGTGGCGATCTAAGCCA CTCCCGGTTGAATTCTCTGCGCGTGCCGCATTCTCTGCCACGGTGCGGTA GTGGGTGTCATAAGCTGCGGTAAAACCTTTCTGTCCATGCCGTGGTCTTC CCCGACATCCAGGCTCGTCTTCTTTTTTGTTTTATGCTCGTGTCTCTCGC GCCTACACTGACGTCGTTTCGGCCGTTCGACGTGAATGCCGTCCCGCGAT GGTTGTTAAAATAGATTTCTCCCATCCGAGGCGGAGACGCGTTTGCCGGG CAGACGCCGACGCGAAGCTTTAGGGATATTATGGCGGAGCAGGCCCTCGC CAAGGAGAAGGATGTGGTAAGTGCCCTTGGTTTGCTGGCTTGGGTGCGAC CATGCACGAGTTTGGGTTGTAACTTCTGTCTGAAGTCGCAAGTATGTCTC TTTGGCCGATATTTACTTTATTTGTTTTGCTCGTGTTTGATAGGAGCATG CATATACGCACGTGTTTTGTATACAGGTAATTTTTTGGCGATGGATACCG TGTGGCTTGAGTTGGACACGCCGCTTCACACACACACACCTAACCGCTAA GGCATGCAAAACATGAGTACCCCCCCCCCCCCCCCCCCGTCACGAACGTC GCAGATCATGCGGAAGGCTGCCAAGCAGGCGGAAGAGGCAGCCAGCCTCA AGCGGTCGGTGCCATCCTCTTCCGCCGGAGGCGCCGCCGGAGTGTACGGC CCGGGCGCCGGGGCGGCGGCGGCGGCAGCGGCGGCGGCATCGACAACGCC TCGCGTCGGCGGCGGCGCGGGGTCCGTCCGCAAGAAGCGGCGGTGGGACG ACGGGGGGACCCCGGTCGCCGGTGGCGTCGCGGACGGGGACGAGACCCCC GCGGTCGGCAAGATCGTGTCCGACTGGGACGCGGACGTGGCGACGCCGGT GCGAAGCAGCCGCGGCTTCGGGGGCGGGGAGACCCCCGGGAGGACGCCCG GGGGCGGCGGAGAGACCCCCGGTCGCAGCCGGTGGGATCAGACCCCTAGC CGCGATGCCCAGGAGACCCCCGTCACCAGGCGTTCCAGCAGGTGGGACCA GAGCGGGGGCGGGGGCGTGACGCCCATGGCGGGAGGCGTTACCCCCGGCG GGGTCGGGGACACTCCCAAGGCCGGGTCGAAGTGGGACGACGAGACTCCG AGGGCGGGGGGCGGGTTCGGGGCGGGGGAGACGCCCTCGGGGCGTAAGAA GTCTCGGTGGGATCAGGTGGGCAGCGGGCGTTCGTATGATGCGTTTTATG CACATGCCGCCCTTAGTAAACCCTAACCCTATGCATAGCCTTAAGAAGTA CATAAGTTTACGCAACGTTTTTTTGTTTGTTTTGGTGTCGTCGTGGGCGA AGTGTGCTCTGGGATAAGGTATTGTAGTGTCGTTGTCTCCTTTCGTCATG CGTGACGGCGAGGCTTGTGCTGTTGGGGTTCCCGCGCGATTTGATTGATG TCTCCTTGCCCCTTCTTGAGAACGTGCGCGGTGTCGGGGTGCAGAAGTCT TGGACACGAGAGAGCGCCGCCTCATTTCCACCGTGGAATGCGTTTTTTTT TGCTCCCTACGGAGCCAGTTCCGCCCGCTAGTCTTCCCCACCCTCTCCTC GTGAACGATGAGATATGAGAGTACGGCGCTGGTCACCTAAGTGTTTATCT CTCCCTCCGGCATTGTAAGGATGCGAGGTCAATGGTCTCACGACTACGGT GCTGCTCACCTAACTCTATAACCCCCCCCCCTCTCTCTCCCCCTTCCCGC CCTCCTCGCAGACCCCTCAAGCTGGCGTAACGCCGGGGCAGACCCCGGTG GCGGGCGCCATGATGACCCCCGGCGCGACGCCGTCCGCGGGGTGGACGCC CGGGCAGACCCCCTCGGGGATGGTGACTCCCAGCCCTAATCTCGCGCAGG CGGGGCTGGGCGGGGCCGGGGAGCCGATGACTCCGGAGCTGGCTCAACAG ATGCGGTGGGAAAGGGAGCTAGACGAGAGGAACCGCCCGCTGACCGACGA GGATCTGGACGCGATGTTCCCGCCAGCGGGG
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1432:28521..32751+

>mRNA_E-siliculosus-1a_F_contig1432.2543.1 ID=mRNA_E-siliculosus-1a_F_contig1432.2543.1|Name=mRNA_E-siliculosus-1a_F_contig1432.2543.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2532bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1432:28521..32751+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGCTAACGTTGACGAGGAGATAAAGGCACTCCAGAAGGAGCGGGAGAG
CGGGATCGTGGCAACGGCGGACGGCGAGGATGACGGCGGGGACGGGGGGG
AGGGGGATGGCGCCGACGGCCAGGTGGCGCTCACGGGGGCGGGCGCCTAC
GATCGAGACATCTACGGCGGCGGCGGCGACAAGTTTGCCGGATGGCTAAC
GTTGACGAGGAGATAAAGGCACTCCAGAAGGAGCGGGAGAGCGGGATCGT
GGCAACGGCGGACGGCGAGGATGACGGCGGGGACGGGGGGGAGGGGGATG
GCGCCGACGGCCAGGTGGCGCTCACGGGGGCGGGCGCCTACGATCGAGAC
ATCTACGGCGGCGGCGGCGACAAGTTTGCCGGAGTCTCCCGAACGGTCGT
GGAGGAAGAAGAGCCCGAGGACGAGGACGAGGTCGTCACGAGCCACCGCG
GCGGCGGCGGCGCCTCGCACCCGGCCTCCCGTGCAAGCGTCAACGCTCCC
CGGCACCTGCTCGACGGCGGCGAGGAGAGGGAGGGCGGCGACGACGACAA
CAGCACTATCGCGGGCATGCGGGCCGGGGGGTCCGGGATGGTGAACACGG
TCATCGCGGAGCGAGAGTCGGCGTACCAGGCGAAGGGTCGCCGGAACCAG
ATGAGTCTCCCGAACGGTCGTGGAGGAAGAAGAGCCCGAGGACGAGGACG
AGGTCGTCACGAGCCACCGCGGCGGCGGCGGCGCCTCGCACCCGGCCTCC
CGTGCAAGCGTCAACGCTCCCCGGCACCTGCTCGACGGCGGCGAGGAGAG
GGAGGGCGGCGACGACGACAACAGCACTATCGCGGGCATGCGGGCCGGGG
GGTCCGGGATGGTGAACACGGTCATCGCGGAGCGAGAGTCGGCGTACCAG
GCGAAGGGTCGCCGGAACCAGATGATTTCTCCCATCCGAGGCGGAGACGC
GTTTGCCGGGCAGACGCCGACGCGAAGCTTTAGGGATATTATGGCGGAGC
AGGCCCTCGCCAAGGAGAAGGATGTGATTTCTCCCATCCGAGGCGGAGAC
GCGTTTGCCGGGCAGACGCCGACGCGAAGCTTTAGGGATATTATGGCGGA
GCAGGCCCTCGCCAAGGAGAAGGATGTGAAGCGGCGGTGGGACGACGGGG
GGACCCCGGTCGCCGGTGGCGTCGCGGACGGGGACGAGACCCCCGCGGTC
GGCAAGATCGTGTCCGACTGGGACGCGGACGTGGCGACGCCGGTGCGAAG
CAGCCGCGGCTTCGGGGGCGGGGAGACCCCCGGGAGGACGCCCGGGGGCG
GCGGAGAGACCCCCGGTCGCAGCCGGTGGGATCAGACCCCTAGCCGCGAT
GCCCAGGAGACCCCCGTCACCAGGCGTTCCAGCAGGTGGGACCAGAGCGG
GGGCGGGGGCGTGACGCCCATGGCGGGAGGCGTTACCCCCGGCGGGGTCG
GGGACACTCCCAAGGCCGGGTCGAAGTGGGACGACGAGACTCCGAGGGCG
GGGGGCGGGTTCGGGGCGGGGGAGACGCCCTCGGGGCGTAAGAAGTCTCG
GTGGGATCAGAAGCGGCGGTGGGACGACGGGGGGACCCCGGTCGCCGGTG
GCGTCGCGGACGGGGACGAGACCCCCGCGGTCGGCAAGATCGTGTCCGAC
TGGGACGCGGACGTGGCGACGCCGGTGCGAAGCAGCCGCGGCTTCGGGGG
CGGGGAGACCCCCGGGAGGACGCCCGGGGGCGGCGGAGAGACCCCCGGTC
GCAGCCGGTGGGATCAGACCCCTAGCCGCGATGCCCAGGAGACCCCCGTC
ACCAGGCGTTCCAGCAGGTGGGACCAGAGCGGGGGCGGGGGCGTGACGCC
CATGGCGGGAGGCGTTACCCCCGGCGGGGTCGGGGACACTCCCAAGGCCG
GGTCGAAGTGGGACGACGAGACTCCGAGGGCGGGGGGCGGGTTCGGGGCG
GGGGAGACGCCCTCGGGGCGTAAGAAGTCTCGGTGGGATCAGACCCCTCA
AGCTGGCGTAACGCCGGGGCAGACCCCGGTGGCGGGCGCCATGATGACCC
CCGGCGCGACGCCGTCCGCGGGGTGGACGCCCGGGCAGACCCCCTCGGGG
ATGGTGACTCCCAGCCCTAATCTCGCGCAGGCGGGGCTGGGCGGGGCCGG
GGAGCCGATGACTCCGGAGCTGGCTCAACAGATGCGGTGGGAAAGGGAGC
TAGACGAGAGGAACCGCCCGCTGACCGACGAGGATCTGGACGCGATGTTC
CCGCCAGCGGGGACCCCTCAAGCTGGCGTAACGCCGGGGCAGACCCCGGT
GGCGGGCGCCATGATGACCCCCGGCGCGACGCCGTCCGCGGGGTGGACGC
CCGGGCAGACCCCCTCGGGGATGGTGACTCCCAGCCCTAATCTCGCGCAG
GCGGGGCTGGGCGGGGCCGGGGAGCCGATGACTCCGGAGCTGGCTCAACA
GATGCGGTGGGAAAGGGAGCTAGACGAGAGGAACCGCCCGCTGACCGACG
AGGATCTGGACGCGATGTTCCCGCCAGCGGGG
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