mRNA_E-siliculosus-1a_F_contig1432.2540.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1432.2540.1
Unique NamemRNA_E-siliculosus-1a_F_contig1432.2540.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1432.2540.1 vs. uniprot
Match: D7G1P7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1P7_ECTSI)

HSP 1 Score: 1077 bits (2785), Expect = 0.000e+0
Identity = 705/781 (90.27%), Postives = 717/781 (91.81%), Query Frame = 1 
Query:  217 MAVSRDTLPALSMADDGEGALFGPEESEGGPAGPGGDSNPLGPPPPYREEHTPGGTRFKELLARANGQGAPPPPASPSAEPRRVLPPEGAPDYDDDNQWEEQTIGSPDVPDPPLRQNMPGLDLGPELDYGGGGEAXXXXXXXSRFSRMMNQARQNDDRQEAGMAPRASPRSPQEVAKRAAAAQAPVSKEEKERAIKAAVERQQKMMAKARGIDLDDPTLEGAELARKKALSRAQAEAQAGGYVPSSSAADDYLNSLKADSQKKQKETQAKLRGDPLPPREGPLLSASPPTETATSAVPDKSAAPLRSGEDYERVKPQKRTAASWSIQNKADQYMASLKGIKVELADDNPYLKKESLVEEPQQPVRRPPPAP-KPPLGPQMSYTEKLKLAKGAKAAGTATAAAPSSNVVAAPVATLPPATEXXXXXXPSSGSPALSYAEKLKQAQAEEAAAGNGVAPKSVPXXXXXXXXXXXV---APASRTLLEQEMPSGGLVDEGDSQAKMVKVMDLLTQHKTAGLEGEDRVSELRHSLVDAREALRAETYGRSAAAAXXXXXXXXXXXXXXSSTPMPXXXXXXXXXXXXXXXXXXXXXXXXXPARXXXXXXXATSPEDAATLRRCSALLQAHVHSGLAGQDLQALVEGLASSLTIVTAQVVTGTAAXXXXXXXXXXXXXXXXX---DAGVPAYAGGIQSVGGALSDMGVAKKPASFLPEEGEGDGSAGWTGGSLGEEEKAAASKALGYLLKHRGGKGYGRGRVTGAQAEAMVAALAEVTEIMEEEMVEE 2538
            MAVSRDTLPALSMADDGEGALFGPEESEGGPAGPGGDSNPLGPPPPYREEHTPGGTRFKELLARANGQGAP       A+PRR LPPEGAPDYDDDNQWEEQ IGSPDVPDPPLR+NMPGLDLGPELDYGGGGEAXXXXXXX            NDDRQEAGMAPRASPRSPQEVAKRAAAAQAPVSKEEKERAIKAAVERQQKMMAKARGIDLDDPTLEGAELARKKALSRAQAEAQAGGYVPSSSAADDYLNSLKADSQKKQKETQAKLRG+PLPPREGPLLSASPPTETATS VPDKSAAPL SGEDYERVKPQKRTAASWSIQNKADQYMASLKGIKVELADDNPYLK ESLVEEP+QPVRRPP    KPPLGPQMSY EK+KLAKGAKAAGTATAAAPSSNVVAAPVATLPPATE XXXXXPSSGSPALSYAEKLKQAQA++AAAGNGV PKSVPXXXXXXXXXXX    APASR LLEQ+MPSGGLVDEGDSQAKMVK+MDLLT+HKTAGLEGEDRVSELRHSLVDAREALRAETYGRSA   XXXXXXXXXXXXXX            XXXXXXXXXXXXXXXXXXX   XXXXXXX    EDAA LRRCSALLQAHVHSGLAGQDLQALVEGLASSLTIVTAQVVTGTA XXXXXXXXXXXXXXXXX   D GVPAYAGGIQSVGGALSDMGVAKKPASFLPEEGEGDGSAGWTGGSLGEEEKAAASKALGYLLKHRGGKGYGRG++TGAQAEAMVAALAEVTEIMEEEMVEE
Sbjct:    1 MAVSRDTLPALSMADDGEGALFGPEESEGGPAGPGGDSNPLGPPPPYREEHTPGGTRFKELLARANGQGAPXXXXXXXAKPRRALPPEGAPDYDDDNQWEEQAIGSPDVPDPPLRENMPGLDLGPELDYGGGGEAXXXXXXXXXXXXXXXXXXXNDDRQEAGMAPRASPRSPQEVAKRAAAAQAPVSKEEKERAIKAAVERQQKMMAKARGIDLDDPTLEGAELARKKALSRAQAEAQAGGYVPSSSAADDYLNSLKADSQKKQKETQAKLRGEPLPPREGPLLSASPPTETATSDVPDKSAAPLSSGEDYERVKPQKRTAASWSIQNKADQYMASLKGIKVELADDNPYLK-ESLVEEPRQPVRRPPXXXXKPPLGPQMSYAEKMKLAKGAKAAGTATAAAPSSNVVAAPVATLPPATEAXXXXXPSSGSPALSYAEKLKQAQAQKAAAGNGVFPKSVPXXXXXXXXXXXXXXXAPASRRLLEQDMPSGGLVDEGDSQAKMVKLMDLLTEHKTAGLEGEDRVSELRHSLVDAREALRAETYGRSAXXXXXXXXXXXXXXXXXXXX---------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDAAILRRCSALLQAHVHSGLAGQDLQALVEGLASSLTIVTAQVVTGTAXXXXXXXXXXXXXXXXXXXXDDTGVPAYAGGIQSVGGALSDMGVAKKPASFLPEEGEGDGSAGWTGGSLGEEEKAAASKALGYLLKHRGGKGYGRGKMTGAQAEAMVAALAEVTEIMEEEMVEE 771
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1432.2540.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G1P7_ECTSI0.000e+090.27Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1432contigE-siliculosus-1a_F_contig1432:11383..16273 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start0
Stop1
Cds size2541
Model size2543
Exons5
Hectar predicted targeting categorysignal peptide
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1432.2540.1prot_E-siliculosus-1a_F_contig1432.2540.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1432 11383..16273 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927946.4888895-CDS-E-siliculosus-1a_F_contig1432:11382..122161622927946.4888895-CDS-E-siliculosus-1a_F_contig1432:11382..12216Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1432 11383..12216 -
1696318748.3598447-CDS-E-siliculosus-1a_F_contig1432:11382..122161696318748.3598447-CDS-E-siliculosus-1a_F_contig1432:11382..12216Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1432 11383..12216 -
1622927946.5014324-CDS-E-siliculosus-1a_F_contig1432:12454..130451622927946.5014324-CDS-E-siliculosus-1a_F_contig1432:12454..13045Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1432 12455..13045 -
1696318748.3718672-CDS-E-siliculosus-1a_F_contig1432:12454..130451696318748.3718672-CDS-E-siliculosus-1a_F_contig1432:12454..13045Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1432 12455..13045 -
1622927946.5150697-CDS-E-siliculosus-1a_F_contig1432:13956..141431622927946.5150697-CDS-E-siliculosus-1a_F_contig1432:13956..14143Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1432 13957..14143 -
1696318748.380435-CDS-E-siliculosus-1a_F_contig1432:13956..141431696318748.380435-CDS-E-siliculosus-1a_F_contig1432:13956..14143Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1432 13957..14143 -
1622927946.5289173-CDS-E-siliculosus-1a_F_contig1432:14708..153431622927946.5289173-CDS-E-siliculosus-1a_F_contig1432:14708..15343Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1432 14709..15343 -
1696318748.3880196-CDS-E-siliculosus-1a_F_contig1432:14708..153431696318748.3880196-CDS-E-siliculosus-1a_F_contig1432:14708..15343Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1432 14709..15343 -
1622927946.5391164-CDS-E-siliculosus-1a_F_contig1432:15979..162731622927946.5391164-CDS-E-siliculosus-1a_F_contig1432:15979..16273Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1432 15980..16273 -
1696318748.395348-CDS-E-siliculosus-1a_F_contig1432:15979..162731696318748.395348-CDS-E-siliculosus-1a_F_contig1432:15979..16273Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1432 15980..16273 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1432.2540.1

>prot_E-siliculosus-1a_F_contig1432.2540.1 ID=prot_E-siliculosus-1a_F_contig1432.2540.1|Name=mRNA_E-siliculosus-1a_F_contig1432.2540.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=847bp
LTTQQSTCTEVMRTHKHRRGTTLLVILQAWIFPCHGFTYAPHSLGTSRSG
SSSPVGHQSSLAALQPRLLNGAMAVSRDTLPALSMADDGEGALFGPEESE
GGPAGPGGDSNPLGPPPPYREEHTPGGTRFKELLARANGQGAPPPPASPS
AEPRRVLPPEGAPDYDDDNQWEEQTIGSPDVPDPPLRQNMPGLDLGPELD
YGGGGEAGASGGGGSRFSRMMNQARQNDDRQEAGMAPRASPRSPQEVAKR
AAAAQAPVSKEEKERAIKAAVERQQKMMAKARGIDLDDPTLEGAELARKK
ALSRAQAEAQAGGYVPSSSAADDYLNSLKADSQKKQKETQAKLRGDPLPP
REGPLLSASPPTETATSAVPDKSAAPLRSGEDYERVKPQKRTAASWSIQN
KADQYMASLKGIKVELADDNPYLKKESLVEEPQQPVRRPPPAPKPPLGPQ
MSYTEKLKLAKGAKAAGTATAAAPSSNVVAAPVATLPPATEAPPPPAPSS
GSPALSYAEKLKQAQAEEAAAGNGVAPKSVPPPPPPPAAAAAVAPASRTL
LEQEMPSGGLVDEGDSQAKMVKVMDLLTQHKTAGLEGEDRVSELRHSLVD
AREALRAETYGRSAAAAAATAPAATAPAATASSTPMPPPPPPPPQPPVAA
APSPPPPRQQQQPARPAPPAPPATSPEDAATLRRCSALLQAHVHSGLAGQ
DLQALVEGLASSLTIVTAQVVTGTAAAAGGGASGAPPAAAGGDDAGVPAY
AGGIQSVGGALSDMGVAKKPASFLPEEGEGDGSAGWTGGSLGEEEKAAAS
KALGYLLKHRGGKGYGRGRVTGAQAEAMVAALAEVTEIMEEEMVEE*
back to top

mRNA from alignment at E-siliculosus-1a_F_contig1432:11383..16273-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1432.2540.1 ID=mRNA_E-siliculosus-1a_F_contig1432.2540.1|Name=mRNA_E-siliculosus-1a_F_contig1432.2540.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=4891bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1432:11383..16273- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CTCACCACACAGCAGTCCACATGCACGGAGGTCATGAGGACTCATAAGCA
TCGCCGTGGAACCACTCTGCTGGTGATACTGCAGGCGTGGATATTCCCGT
GCCATGGGTTCACTTACGCGCCGCACAGCCTTGGCACCTCCCGATCTGGG
TCCTCGTCGCCGGTGGGACATCAATCCTCCCTCGCTGCGCTGCAGCCTCG
CCTGCTCAACGGTGCCATGGCTGTCTCTAGGGACACGCTGCCAGCCCTGA
GCATGGCCGATGATGGAGAAGGGGCACTCTTCGGCCCAGAGGAGGTGCGT
TGTTTTCAGGATCGTGCGTTGTTGCAGTGGTTGCGCCCTTGTTGCAGTTG
TGGGTTGTTCTCTACGAGTAGCTGCTGCTGCTGCTGCTGCTGTGTCGGGA
AAACGCGGCACATGAACGGCGGCGGCAGACCGGAAAGTACGCTAGGAGCC
GCTTGTCCTGCTGCGACAAGCCGAGCGCATCCCACTTATGTGGTGCTGTA
GGCTGCACAGCAGCCTACACCAAGCTTATGCGGTGCACGAAAATCAACCA
CATGATGGCGGGTTTGTTTCCAACAGCAACAGCAGAGATGCATACGTACA
TGTTAGCTGTTGTTTGCCGTTGGCTTGCGTGTGAGCGCGTAGGAACCACA
GGTCTGCTCGAACCGGAGCAGCCTCTTTGGTCTTGTGCTGTAGCATGTCC
CCTTGCACTACAGTAGAGCGAACGTAATTATTTCTTCTTCGGGCAATATG
TCAAACCGACTGTTATTTCTGTTGTTCTTCAAAAAGCCCCAACACCACCG
CTTCCATGCCCGGAAGCTTTACTCAAGTTGAACCAACCGCACGTCCCCTC
CTAAGCCTAGGGTTACGATATCACCAACCCAACCTCTGCTGCCGCCGACG
CCGCTACCGCTGTTTCTGCGCCAAAAACAGTCGGAAGGAGGTCCAGCCGG
GCCGGGCGGAGACAGCAACCCCCTCGGCCCCCCCCCGCCGTACCGAGAAG
AGCACACCCCCGGCGGCACCCGATTCAAGGAGCTCCTCGCCCGGGCCAAC
GGCCAGGGCGCTCCCCCGCCGCCGGCGTCGCCGTCGGCCGAGCCCCGCCG
CGTCCTTCCGCCGGAAGGCGCCCCGGACTACGACGACGATAACCAGTGGG
AGGAGCAGACCATCGGGTCCCCAGACGTGCCGGACCCGCCCCTCCGGCAG
AACATGCCGGGGCTGGACCTCGGGCCCGAGCTCGACTACGGGGGCGGGGG
CGAGGCCGGCGCGAGCGGCGGCGGCGGCAGCCGGTTCTCGCGGATGATGA
ACCAGGCCAGGCAGAACGACGACCGGCAGGAGGCCGGGATGGCGCCGAGG
GCGAGCCCGCGGTCGCCGCAGGAGGTGGCGAAGCGGGCGGCGGCGGCGCA
GGCCCCCGTGAGCAAGGAGGAGAAGGAGAGGGCCATTAAGGCGGCCGTGG
AGCGGCAGCAGAAGATGATGGCCAAGGCGAGGGGGATCGACCTTGACGAC
CCGACCCTCGAGGGCGCCGAGCTGGCCAGGAAAAAGGCTCTGAGCCGAGC
ACAGGCGGAGGCACAGTGAGTGGTAGAGTTGATGCATGTGCTGTCTACGG
TTGTTGCGTAACGCCAATGGCCGTTCGGTGGTGGTGCACACCTGTCCATG
ACAAGCGCCTTTTCTGTGAGCGCGTTGTTGCTGCGTTTGCTTAGCGAGAT
CTTTGGATACTCCTGTGCGCTGTATGTAGGTATCCTGGACAGCGGGCGCT
GGGAGCTGACGCATGTACGTGTCAATCTGGCGCGTCGGTCCTGTAGGGTT
TCACTCGGGCTTCTGGCCTGAGTACGCGCTCGTTGTTGAGGACACCTTCT
GCATTTCTCGATTACGTGTCTTCTGATACTCGAGAGCTGCACGCAGCAAC
GACTTCACGGCAAAGTCTCATGGAGTTTTCCTGTCTTTGGAGGCCTTAAT
CCTGTGGTCTTTCCCCATTGCTGTTTTGAGGACGAGTGCTCGCTGTGCCT
TGCTCTGGGCATGCGCTGGGTCCCCTGTAGGGCAAACGTGCACGCACGTG
CAACACAGCATGTTGAATGACTGGCCGATTGCAACCTGTCCTCGATCCGC
TGTCCTTGTGTGGCGCCACGGTATCAACAGGGCCGGCGGCTACGTGCCGA
GCTCGAGCGCCGCGGACGACTACCTCAACTCCCTCAAGGCCGACTCGCAG
AAGAAGCAGAAGGAAACGCAGGCTAAGCTGCGCGGGGATCCCCTTCCCCC
CAGAGAAGGACCGCTCCTGTCCGCTTCCCCGCCAACCGAAACGGCCACAT
CAGCTGTGCCCGATAAGGTATTCACGAGAGGAAATATGGCACCTTTGGCG
TAAATCCCGTAAGAGGTTTTGACGGCTATGTGCGCGCCCGGAGAACGACG
CACCACAAAATGGTGGATTTTTGTTTCGGGGGGGGGAGATGGGCGGTTGC
CTCAGTTCTTTTGCCGCGTACCCGGACTCGTTTTTTCCCGACTACCTCTG
TCGCGTCGACTCCGCTTGGTCGGTTAGGAGGGCAGAACCACGCAGACAAT
CGTCAGAGGTAACACTTTAGTCAGGAATGGTTCGAATTTTCAGACGGGAA
TACCCTTCAAATTGCTGCCCGGCTGGTTGAAGAACAATCTGCCGTGGGGC
GTCGATGCCTTCGGGGTAGATCAGAGGTTTCATCAATGACTCGGATAACA
TGGCTTGATTGTCACGTACTTCATCCTTGAAGTATCCATACCAGTCGGAG
GGGAATAGGTTGTTGCAAACTGTCCAGCTGCCAATACCCCTCTTGTACAT
TTTCCCTTTTCATCATTAACATCTAAACTGCCCGGCTGCCATAACGCGAA
AAACATGTGTTGACTCGCAAGCAACAGTTCAAGACTGAAATGTTTCCTCT
TTTGAAAAACACGTTGAGGCTTCAGATCAAAACCCGCCCGCCGGTCGTTA
GCGTCTATCTGGCGTTGTGGTGCCAGATCCGGCTTCTTGCCACCTTACGA
CCCAAACGGTTGAACGCTTGGATTCACGAGCGGTACTCCGGAGCTTTGAT
TCTTTGTTTGTTTCCTGTTTGAGTCTTGACCCTTATTGGTGTCGCCGGCA
AGAGGTGACCAACAGCCTGCTCGCTCCGCGTTTGCCCACATCATTTTTTT
TGTTATTGTGGGTTCCTGCCGTTCATGCTGCCCCCCCTCCGATCACATCA
CCCCCTTGCTCCACCCACCCGTTCTCAGTCGGCGGCCCCCCTGCGGTCGG
GGGAGGACTACGAGCGGGTCAAGCCCCAAAAGCGCACGGCCGCTTCGTGG
AGCATCCAGAACAAGGCCGACCAGTACATGGCTTCCCTCAAGGGGATCAA
GGTGGAACTCGCGGACGACAACCCGTACCTGAAGAAGGAGTCTCTGGTTG
AAGAGCCGCAGCAGCCGGTGCGGCGGCCGCCGCCGGCGCCCAAGCCCCCG
CTCGGCCCCCAGATGAGCTACACCGAGAAGCTGAAGCTCGCCAAGGGGGC
GAAAGCTGCGGGTACCGCGACCGCCGCTGCGCCTTCGTCGAACGTGGTCG
CGGCCCCTGTTGCTACCCTGCCCCCTGCAACCGAGGCGCCACCGCCGCCG
GCCCCGTCTTCTGGATCGCCCGCTCTCAGCTATGCGGAGAAGCTGAAGCA
GGCCCAGGCGGAAGAGGCCGCCGCCGGTAACGGGGTCGCCCCGAAGTCGG
TGCCGCCACCGCCGCCGCCACCCGCGGCGGCTGCTGCCGTCGCCCCTGCG
TCGAGGACACTGTTGGAGCAGGAGATGCCGTCGGGTGGTTTGGTTGACGA
AGGCGACTCGCAGGCGAAGGTGAGCAAGCGCGTTGTGTTCCCGGCAAGAA
TAGGTACAATATAATTGCTTGGTGCGACGCTGGCAGGGCGCAGTGGAGTC
AAGCTGGGTTGTTCTGTTGGGTTTTGCGTTCTTTGCTCTGCTCTCTTGCC
AAAATGTATTCCACAAAGTGCAAAATCGGTTGTCCTTCTTACCGGAGGCA
GCACCGGACCATTCGCCCGCCGCGCTACTACTACTGCTGCTGTCTCGCCC
GAAACAGATGGTTAAGGTGATGGACCTGCTTACCCAGCACAAGACGGCTG
GCCTCGAGGGCGAGGACCGCGTGTCCGAGCTGCGCCACTCCCTCGTCGAT
GCGCGCGAAGCCCTCCGGGCCGAGACGTACGGCAGGTCGGCGGCCGCGGC
CGCGGCAACGGCGCCAGCGGCGACGGCGCCAGCGGCGACGGCGTCATCGA
CGCCCATGCCACCACCACCACCACCGCCGCCGCAACCACCAGTAGCAGCA
GCTCCGTCGCCCCCACCTCCGCGGCAACAGCAGCAGCCGGCACGGCCGGC
CCCGCCGGCCCCGCCAGCGACTAGCCCAGAAGATGCGGCGACCCTTCGCC
GCTGCAGCGCCCTGCTACAGGCGCACGTGCACTCGGGACTCGCGGGCCAG
GACCTCCAGGCCCTGGTGGAAGGACTCGCGTCCTCCCTCACCATCGTCAC
GGCCCAGGTCGTGACCGGCACTGCCGCCGCGGCCGGCGGCGGCGCTAGCG
GAGCACCACCAGCAGCGGCGGGGGGTGACGATGCGGGGGTGCCGGCCTAC
GCCGGGGGGATTCAGTCCGTAGGGGGAGCCCTGTCGGACATGGGCGTGGC
GAAGAAACCGGCGTCGTTCTTGCCGGAGGAGGGGGAGGGGGACGGGAGCG
CCGGGTGGACGGGGGGAAGCCTCGGGGAGGAGGAGAAGGCCGCGGCCTCG
AAGGCCCTGGGTTACCTGCTCAAGCACCGCGGCGGGAAAGGGTACGGGCG
CGGGAGGGTGACCGGCGCGCAGGCGGAGGCGATGGTGGCGGCGCTCGCCG
AGGTGACCGAGATCATGGAGGAGGAGATGGTCGAAGAATAA
back to top

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1432:11383..16273-

>mRNA_E-siliculosus-1a_F_contig1432.2540.1 ID=mRNA_E-siliculosus-1a_F_contig1432.2540.1|Name=mRNA_E-siliculosus-1a_F_contig1432.2540.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=5082bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1432:11383..16273- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CTCACCACACAGCAGTCCACATGCACGGAGGTCATGAGGACTCATAAGCA
TCGCCGTGGAACCACTCTGCTGGTGATACTGCAGGCGTGGATATTCCCGT
GCCATGGGTTCACTTACGCGCCGCACAGCCTTGGCACCTCCCGATCTGGG
TCCTCGTCGCCGGTGGGACATCAATCCTCCCTCGCTGCGCTGCAGCCTCG
CCTGCTCAACGGTGCCATGGCTGTCTCTAGGGACACGCTGCCAGCCCTGA
GCATGGCCGATGATGGAGAAGGGGCACTCTTCGGCCCAGAGGAGCTCACC
ACACAGCAGTCCACATGCACGGAGGTCATGAGGACTCATAAGCATCGCCG
TGGAACCACTCTGCTGGTGATACTGCAGGCGTGGATATTCCCGTGCCATG
GGTTCACTTACGCGCCGCACAGCCTTGGCACCTCCCGATCTGGGTCCTCG
TCGCCGGTGGGACATCAATCCTCCCTCGCTGCGCTGCAGCCTCGCCTGCT
CAACGGTGCCATGGCTGTCTCTAGGGACACGCTGCCAGCCCTGAGCATGG
CCGATGATGGAGAAGGGGCACTCTTCGGCCCAGAGGAGTCGGAAGGAGGT
CCAGCCGGGCCGGGCGGAGACAGCAACCCCCTCGGCCCCCCCCCGCCGTA
CCGAGAAGAGCACACCCCCGGCGGCACCCGATTCAAGGAGCTCCTCGCCC
GGGCCAACGGCCAGGGCGCTCCCCCGCCGCCGGCGTCGCCGTCGGCCGAG
CCCCGCCGCGTCCTTCCGCCGGAAGGCGCCCCGGACTACGACGACGATAA
CCAGTGGGAGGAGCAGACCATCGGGTCCCCAGACGTGCCGGACCCGCCCC
TCCGGCAGAACATGCCGGGGCTGGACCTCGGGCCCGAGCTCGACTACGGG
GGCGGGGGCGAGGCCGGCGCGAGCGGCGGCGGCGGCAGCCGGTTCTCGCG
GATGATGAACCAGGCCAGGCAGAACGACGACCGGCAGGAGGCCGGGATGG
CGCCGAGGGCGAGCCCGCGGTCGCCGCAGGAGGTGGCGAAGCGGGCGGCG
GCGGCGCAGGCCCCCGTGAGCAAGGAGGAGAAGGAGAGGGCCATTAAGGC
GGCCGTGGAGCGGCAGCAGAAGATGATGGCCAAGGCGAGGGGGATCGACC
TTGACGACCCGACCCTCGAGGGCGCCGAGCTGGCCAGGAAAAAGGCTCTG
AGCCGAGCACAGGCGGAGGCACATCGGAAGGAGGTCCAGCCGGGCCGGGC
GGAGACAGCAACCCCCTCGGCCCCCCCCCGCCGTACCGAGAAGAGCACAC
CCCCGGCGGCACCCGATTCAAGGAGCTCCTCGCCCGGGCCAACGGCCAGG
GCGCTCCCCCGCCGCCGGCGTCGCCGTCGGCCGAGCCCCGCCGCGTCCTT
CCGCCGGAAGGCGCCCCGGACTACGACGACGATAACCAGTGGGAGGAGCA
GACCATCGGGTCCCCAGACGTGCCGGACCCGCCCCTCCGGCAGAACATGC
CGGGGCTGGACCTCGGGCCCGAGCTCGACTACGGGGGCGGGGGCGAGGCC
GGCGCGAGCGGCGGCGGCGGCAGCCGGTTCTCGCGGATGATGAACCAGGC
CAGGCAGAACGACGACCGGCAGGAGGCCGGGATGGCGCCGAGGGCGAGCC
CGCGGTCGCCGCAGGAGGTGGCGAAGCGGGCGGCGGCGGCGCAGGCCCCC
GTGAGCAAGGAGGAGAAGGAGAGGGCCATTAAGGCGGCCGTGGAGCGGCA
GCAGAAGATGATGGCCAAGGCGAGGGGGATCGACCTTGACGACCCGACCC
TCGAGGGCGCCGAGCTGGCCAGGAAAAAGGCTCTGAGCCGAGCACAGGCG
GAGGCACAGGCCGGCGGCTACGTGCCGAGCTCGAGCGCCGCGGACGACTA
CCTCAACTCCCTCAAGGCCGACTCGCAGAAGAAGCAGAAGGAAACGCAGG
CTAAGCTGCGCGGGGATCCCCTTCCCCCCAGAGAAGGACCGCTCCTGTCC
GCTTCCCCGCCAACCGAAACGGCCACATCAGCTGTGCCCGATAAGGGCCG
GCGGCTACGTGCCGAGCTCGAGCGCCGCGGACGACTACCTCAACTCCCTC
AAGGCCGACTCGCAGAAGAAGCAGAAGGAAACGCAGGCTAAGCTGCGCGG
GGATCCCCTTCCCCCCAGAGAAGGACCGCTCCTGTCCGCTTCCCCGCCAA
CCGAAACGGCCACATCAGCTGTGCCCGATAAGTCGGCGGCCCCCCTGCGG
TCGGGGGAGGACTACGAGCGGGTCAAGCCCCAAAAGCGCACGGCCGCTTC
GTGGAGCATCCAGAACAAGGCCGACCAGTACATGGCTTCCCTCAAGGGGA
TCAAGGTGGAACTCGCGGACGACAACCCGTACCTGAAGAAGGAGTCTCTG
GTTGAAGAGCCGCAGCAGCCGGTGCGGCGGCCGCCGCCGGCGCCCAAGCC
CCCGCTCGGCCCCCAGATGAGCTACACCGAGAAGCTGAAGCTCGCCAAGG
GGGCGAAAGCTGCGGGTACCGCGACCGCCGCTGCGCCTTCGTCGAACGTG
GTCGCGGCCCCTGTTGCTACCCTGCCCCCTGCAACCGAGGCGCCACCGCC
GCCGGCCCCGTCTTCTGGATCGCCCGCTCTCAGCTATGCGGAGAAGCTGA
AGCAGGCCCAGGCGGAAGAGGCCGCCGCCGGTAACGGGGTCGCCCCGAAG
TCGGTGCCGCCACCGCCGCCGCCACCCGCGGCGGCTGCTGCCGTCGCCCC
TGCGTCGAGGACACTGTTGGAGCAGGAGATGCCGTCGGGTGGTTTGGTTG
ACGAAGGCGACTCGCAGGCGAAGTCGGCGGCCCCCCTGCGGTCGGGGGAG
GACTACGAGCGGGTCAAGCCCCAAAAGCGCACGGCCGCTTCGTGGAGCAT
CCAGAACAAGGCCGACCAGTACATGGCTTCCCTCAAGGGGATCAAGGTGG
AACTCGCGGACGACAACCCGTACCTGAAGAAGGAGTCTCTGGTTGAAGAG
CCGCAGCAGCCGGTGCGGCGGCCGCCGCCGGCGCCCAAGCCCCCGCTCGG
CCCCCAGATGAGCTACACCGAGAAGCTGAAGCTCGCCAAGGGGGCGAAAG
CTGCGGGTACCGCGACCGCCGCTGCGCCTTCGTCGAACGTGGTCGCGGCC
CCTGTTGCTACCCTGCCCCCTGCAACCGAGGCGCCACCGCCGCCGGCCCC
GTCTTCTGGATCGCCCGCTCTCAGCTATGCGGAGAAGCTGAAGCAGGCCC
AGGCGGAAGAGGCCGCCGCCGGTAACGGGGTCGCCCCGAAGTCGGTGCCG
CCACCGCCGCCGCCACCCGCGGCGGCTGCTGCCGTCGCCCCTGCGTCGAG
GACACTGTTGGAGCAGGAGATGCCGTCGGGTGGTTTGGTTGACGAAGGCG
ACTCGCAGGCGAAGATGGTTAAGGTGATGGACCTGCTTACCCAGCACAAG
ACGGCTGGCCTCGAGGGCGAGGACCGCGTGTCCGAGCTGCGCCACTCCCT
CGTCGATGCGCGCGAAGCCCTCCGGGCCGAGACGTACGGCAGGTCGGCGG
CCGCGGCCGCGGCAACGGCGCCAGCGGCGACGGCGCCAGCGGCGACGGCG
TCATCGACGCCCATGCCACCACCACCACCACCGCCGCCGCAACCACCAGT
AGCAGCAGCTCCGTCGCCCCCACCTCCGCGGCAACAGCAGCAGCCGGCAC
GGCCGGCCCCGCCGGCCCCGCCAGCGACTAGCCCAGAAGATGCGGCGACC
CTTCGCCGCTGCAGCGCCCTGCTACAGGCGCACGTGCACTCGGGACTCGC
GGGCCAGGACCTCCAGGCCCTGGTGGAAGGACTCGCGTCCTCCCTCACCA
TCGTCACGGCCCAGGTCGTGACCGGCACTGCCGCCGCGGCCGGCGGCGGC
GCTAGCGGAGCACCACCAGCAGCGGCGGGGGGTGACGATGCGGGGGTGCC
GGCCTACGCCGGGGGGATTCAGTCCGTAGGGGGAGCCCTGTCGGACATGG
GCGTGGCGAAGAAACCGGCGTCGTTCTTGCCGGAGGAGGGGGAGGGGGAC
GGGAGCGCCGGGTGGACGGGGGGAAGCCTCGGGGAGGAGGAGAAGGCCGC
GGCCTCGAAGGCCCTGGGTTACCTGCTCAAGCACCGCGGCGGGAAAGGGT
ACGGGCGCGGGAGGGTGACCGGCGCGCAGGCGGAGGCGATGGTGGCGGCG
CTCGCCGAGGTGACCGAGATCATGGAGGAGGAGATGGTCGAAGAATAAAT
GGTTAAGGTGATGGACCTGCTTACCCAGCACAAGACGGCTGGCCTCGAGG
GCGAGGACCGCGTGTCCGAGCTGCGCCACTCCCTCGTCGATGCGCGCGAA
GCCCTCCGGGCCGAGACGTACGGCAGGTCGGCGGCCGCGGCCGCGGCAAC
GGCGCCAGCGGCGACGGCGCCAGCGGCGACGGCGTCATCGACGCCCATGC
CACCACCACCACCACCGCCGCCGCAACCACCAGTAGCAGCAGCTCCGTCG
CCCCCACCTCCGCGGCAACAGCAGCAGCCGGCACGGCCGGCCCCGCCGGC
CCCGCCAGCGACTAGCCCAGAAGATGCGGCGACCCTTCGCCGCTGCAGCG
CCCTGCTACAGGCGCACGTGCACTCGGGACTCGCGGGCCAGGACCTCCAG
GCCCTGGTGGAAGGACTCGCGTCCTCCCTCACCATCGTCACGGCCCAGGT
CGTGACCGGCACTGCCGCCGCGGCCGGCGGCGGCGCTAGCGGAGCACCAC
CAGCAGCGGCGGGGGGTGACGATGCGGGGGTGCCGGCCTACGCCGGGGGG
ATTCAGTCCGTAGGGGGAGCCCTGTCGGACATGGGCGTGGCGAAGAAACC
GGCGTCGTTCTTGCCGGAGGAGGGGGAGGGGGACGGGAGCGCCGGGTGGA
CGGGGGGAAGCCTCGGGGAGGAGGAGAAGGCCGCGGCCTCGAAGGCCCTG
GGTTACCTGCTCAAGCACCGCGGCGGGAAAGGGTACGGGCGCGGGAGGGT
GACCGGCGCGCAGGCGGAGGCGATGGTGGCGGCGCTCGCCGAGGTGACCG
AGATCATGGAGGAGGAGATGGTCGAAGAATAA
back to top