mRNA_E-siliculosus-1a_F_contig1431.2536.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1431.2536.1 vs. uniprot
Match: D7FGT1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGT1_ECTSI) HSP 1 Score: 665 bits (1715), Expect = 9.800e-236 Identity = 340/349 (97.42%), Postives = 344/349 (98.57%), Query Frame = 3
Query: 6 MFSETVSPFSLLFLAGVAHGLIETCEDLQAAFNLTQTQHVVDEIHPFQDIECETFTNMTMTSNTLTLNSSENLDNFFGSSSLTNVRLVVTNGAELIWETHVDFIGDEEVEHMVDGGAVFVGEGSTVHFLNDLEMEDIRIINERDEDSDFASFVRSGGCVWTAGSFIVDGEATFTRCDITGAGESPPGPGGAIYVGATGSVSFNQGVAISETFITDDFGGQGGGIYNLGEVTIAGDSRFEDISANSGVAIYNGEGAEFYFTNDASAFFRDLSNRDSVGSGLTNLGYFEFSGPALFVEADAPVIVATETSQTILSENSAFWTFDEESGEALSVDEAADFTIPASVVFVGFE 1052
MFSE VSPFSLLFL GVAHGLIETCEDLQAAFNLTQTQ V+DEIHPFQDIECETFTNMTMTSNTLTLNSSENLDNFFGSSSLTNVRLVVTNGAELIWETHV+FIGDEEVE MVDGGAVFVGEGSTVHFLNDLEMEDIRIINERDEDSDFASFVRSGGCVWTAGSFIVDGEATFTRCDITGAGESPPGPGGAIYVGATGSVSFNQGVAISETFITDDFGGQGGGIYNLGEVTIAGDSRFEDISA+SGVAIYNGEGAEFYFTNDASAFFRDL+NRDSVGSGLTNLGYFEFSGPALFVEADAPVIVATETSQTILSENSAFWTFDEE GEALSVDEAADFTIPASVVFVGFE
Sbjct: 1 MFSEIVSPFSLLFLVGVAHGLIETCEDLQAAFNLTQTQDVIDEIHPFQDIECETFTNMTMTSNTLTLNSSENLDNFFGSSSLTNVRLVVTNGAELIWETHVNFIGDEEVELMVDGGAVFVGEGSTVHFLNDLEMEDIRIINERDEDSDFASFVRSGGCVWTAGSFIVDGEATFTRCDITGAGESPPGPGGAIYVGATGSVSFNQGVAISETFITDDFGGQGGGIYNLGEVTIAGDSRFEDISASSGVAIYNGEGAEFYFTNDASAFFRDLNNRDSVGSGLTNLGYFEFSGPALFVEADAPVIVATETSQTILSENSAFWTFDEEFGEALSVDEAADFTIPASVVFVGFE 349
BLAST of mRNA_E-siliculosus-1a_F_contig1431.2536.1 vs. uniprot
Match: A0A6H5JCE5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCE5_9PHAE) HSP 1 Score: 504 bits (1297), Expect = 4.260e-171 Identity = 253/349 (72.49%), Postives = 297/349 (85.10%), Query Frame = 3
Query: 6 MFSETVSPFSLLFLAGVAHGLIETCEDLQAAFNLTQTQHVVDEIHPFQDIECETFTNMTMTSNTLTLNSSENLDNFFGSSSLTNVRLVVTNGAELIWETHVDFIGDEEVEHMVDGGAVFVGEGSTVHFLNDLEMEDIRIINERDEDSDFASFVRSGGCVWTAGSFIVDGEATFTRCDITGAGESPPGPGGAIYVGATGSVSFNQGVAISETFITDDFGGQGGGIYNLGEVTIAGDSRFEDISANSGVAIYNGEGAEFYFTNDASAFFRDLSNRDSVGSGLTNLGYFEFSGPALFVEADAPVIVATETSQTILSENSAFWTFDEESGEALSVDEAADFTIPASVVFVGFE 1052
M+++ +S +LL + G HGLIETC+DL AAF TQT+ VV E+HPF DIECETFTNMTMTSN+LT++SSEN+DNF GSSSL NVRL VTNGA+L WET+V F GDEE + MVDGGAV+VGEGSTV FLND++M+DI IINERDEDSDF+SFVRSGGCVWTAG F VDGEATFT CDI+GAGESPPGPGGA+YVG TGSV FN GV I++T ITDDFGG GGGIYNLG+V I GDSRFEDISA+SGVAIYNGEGA F F + A AFF+DL+NRDS GS L N G+F+FSGPALF +A+ PVIVA + S+TI+SE+SAFWT+DE G+ALSV++ ADFT+P SV FVGF+
Sbjct: 82 MYTKGLSSLALLLIPGACHGLIETCDDLLAAFEQTQTEDVVVEMHPFADIECETFTNMTMTSNSLTVSSSENIDNFSGSSSLVNVRLDVTNGAKLFWETNVIFEGDEETDLMVDGGAVYVGEGSTVRFLNDVQMQDIAIINERDEDSDFSSFVRSGGCVWTAGYFRVDGEATFTGCDISGAGESPPGPGGAVYVGETGSVLFNGGVTITDTHITDDFGGSGGGIYNLGKVNIKGDSRFEDISASSGVAIYNGEGATFNFRSGARAFFKDLNNRDSEGSALFNRGFFKFSGPALFFDAELPVIVAVDNSETIISEDSAFWTWDESPGDALSVNDGADFTLPDSVTFVGFD 430
BLAST of mRNA_E-siliculosus-1a_F_contig1431.2536.1 vs. uniprot
Match: D7G0Q4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Q4_ECTSI) HSP 1 Score: 467 bits (1201), Expect = 8.040e-158 Identity = 245/350 (70.00%), Postives = 284/350 (81.14%), Query Frame = 3
Query: 6 MFSETVSPFSLLFLAGVAHGLIETCEDLQAAFNLTQTQHVVDEIHPFQDIECETFTNMTMTSNTLTLNSSENLDNFFGSSSLTNVRLVVTNGAELIWETHVDFIGDEEVEHMVDGGAVFVGEGSTVHFLNDLEMEDIRIINERDEDSDFASFVRSGGCVWTAGSFIVDGEATFTRCDITGAGESPPGPGGAIYVGATGSVSFNQGVAISETFITDDFGGQGGGIYNLGEVTIAGDSRFEDISANSGVAIYNGEGAEFYFTNDASAFFRDLSNRDSVGSGLTNLGYFEFSGPALFVEADAPVIVATETSQTILSENSAFWTF--DEESGEALSVDEAADFTIPASVVFVGF 1049
M+++ S +LL + GVA GLIETCEDLQAAF LTQTQ VVDEI F DIEC FTNMTMTSNTLTLNS+E+L GS+SL NVRL VTNGA+L+WET V F+GDEEVE+ V+GG VFVGEGSTV FLND+++ D+RI NERD DSD A FVR GGCVWTAG F VDGEATFT C I G GESPPG GGA++V ATGSV FNQGVAIS+TFIT+D GG GGGI+NLG+V I GDSRFE++SA SG AI+NGE A F F N ASAFFRDLSNRDS GS L NLG+F+FSGP LFV+A+APVIVATE S TI+S +SAFW F D+ +GEA+SV ++A+ +IP SV FVGF
Sbjct: 1 MYTKLFSSLALLVIPGVARGLIETCEDLQAAFELTQTQDVVDEISTFGDIECPMFTNMTMTSNTLTLNSAEDLSITSGSTSLINVRLEVTNGAKLVWETSVFFLGDEEVENNVNGGGVFVGEGSTVRFLNDVQIRDVRITNERDGDSDNAVFVRDGGCVWTAGFFRVDGEATFTSCAIIGTGESPPGSGGAVFVDATGSVLFNQGVAISDTFITNDGGGDGGGIFNLGKVNIKGDSRFEELSARSGAAIFNGEDASFNFRNGASAFFRDLSNRDSEGSALVNLGFFKFSGPVLFVDAEAPVIVATEGSTTIISRDSAFWMFENDDVTGEAISVADSAEVSIPGSVSFVGF 350
BLAST of mRNA_E-siliculosus-1a_F_contig1431.2536.1 vs. uniprot
Match: D7G1Q9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1Q9_ECTSI) HSP 1 Score: 457 bits (1177), Expect = 1.200e-154 Identity = 235/349 (67.34%), Postives = 272/349 (77.94%), Query Frame = 3
Query: 6 MFSETVSPFSLLFLAGVAHGLIETCEDLQAAFNLTQTQHVVDEIHPFQDIECETFTNMTMTSNTLTLNSSENLDNFFGSSSLTNVRLVVTNGAELIWETHVDFIGDEEVEHMVDGGAVFVGEGSTVHFLNDLEMEDIRIINERDEDSDFASFVRSGGCVWTAGSFIVDGEATFTRCDITGAGESPPGPGGAIYVGATGSVSFNQGVAISETFITDDFGGQGGGIYNLGEVTIAGDSRFEDISANSGVAIYNGEGAEFYFTNDASAFFRDLSNRDSVGSGLTNLGYFEFSGPALFVEADAPVIVATETSQTILSENSAFWTFDEESGEALSVDEAADFTIPASVVFVGFE 1052
M+++ +S +LL + G HGLIETC+DL AAF TQT+ VV E+HPF DIEC+TFTNMTMTSNTLTL WET+V F GDEE E MVDGGAV+VGEGSTV FLND++M D+ IINERDEDSDFASFVRSGGCVWTAG F VDGEATFT CDI GAGESPPGPGGA+YVG TGSV FN+GV I+ET ITDDFGG+GGGIYNLG+V I GDSRFE+ISA++GVAIYNGEGA F F N A AFFRDL+NRDS GS L NLG+F+FSGPA F +A+ PVIVA + S+TILSE+SAFWT+DE G+AL+V+E ADFT+P SV FVGF+
Sbjct: 1 MYTKGLSSLALLLMPGTCHGLIETCDDLLAAFEQTQTEDVVVEMHPFADIECDTFTNMTMTSNTLTL----------------------------FWETNVIFEGDEEAELMVDGGAVYVGEGSTVRFLNDVQMRDVVIINERDEDSDFASFVRSGGCVWTAGYFRVDGEATFTGCDIIGAGESPPGPGGAVYVGETGSVLFNEGVTITETSITDDFGGKGGGIYNLGKVNIKGDSRFEEISASAGVAIYNGEGATFNFRNGAGAFFRDLNNRDSEGSALVNLGFFKFSGPAFFFDAELPVIVAMDNSETILSEDSAFWTWDESPGDALTVNEGADFTLPDSVTFVGFD 321
BLAST of mRNA_E-siliculosus-1a_F_contig1431.2536.1 vs. uniprot
Match: D8LG63_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG63_ECTSI) HSP 1 Score: 252 bits (643), Expect = 1.310e-76 Identity = 126/167 (75.45%), Postives = 141/167 (84.43%), Query Frame = 3
Query: 405 MEDIRIINERDEDSDFASFVRSGGCVWTAGSFIVDGEATFTRCDITGAGESPPGPGGAIYVGATGSVSFNQGVAISETFITDDFGGQGGGIYNLGEVTIAGDSRFEDISANSGVAIYNGEGAEFYFTNDASAFFRDLSNRDSVGSGLTNLGYFEFSGPALFVEADAP 905
M D+ IINE DEDSD+AS+ SGGCV TAG+F V+G+ATFT C+ GAGES PGPGGAI+V TGSVSF++GV I ET ITDDFGGQGGGIYNLGEV +AG SRFEDISA+SGVA+YNGEGA+ FTN A+A FRDLSNRDSVGS L LGYFEFSGPALFVEAD P
Sbjct: 1 MRDVGIINETDEDSDYASYQHSGGCVRTAGTFTVNGDATFTGCESVGAGESAPGPGGAIFVSETGSVSFSEGVTIMETSITDDFGGQGGGIYNLGEVNVAGGSRFEDISASSGVAVYNGEGAQLRFTNGATACFRDLSNRDSVGSALYYLGYFEFSGPALFVEADTP 167
BLAST of mRNA_E-siliculosus-1a_F_contig1431.2536.1 vs. uniprot
Match: D7G2Y5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Y5_ECTSI) HSP 1 Score: 254 bits (648), Expect = 6.340e-75 Identity = 146/314 (46.50%), Postives = 197/314 (62.74%), Query Frame = 3
Query: 21 VSPFSLLFLAG-VAHGLIETCEDLQAAFNLTQTQHVVDEIHPFQDIECETFTNMTMTSNTLTLNSSENLDNFFGSSSLTNVRLVVTNGAELIWETHVDFIGDEEVEHMVDGGAVFVGEGSTVHFLNDLEMEDIRIINERDEDSDFASFVRSGGCVWTAGSFIVDGEATFTRCDITGAGESPPGPGGAIYVGATGSVSFNQGVAISETFITDDFGGQGGGIYNLGEVTIAGDSRFEDISANSGVAIYNGEGAEFYFTNDASAFFRDLSNRDSVGSGLTNLGYFEFSGPALFVEADAPVIVATETSQTILSENSAF 959
+S +LL ++G V G +ETC+DL AF LT +Q VV EI P QDI C++FT M+M++N+LT+ + D GS L VR VT+GA+L+W F G E + V+GGAV+VGEGS+ F + L ++ + + +E SDFAS+ GGCV+ G F V+G A+F C+ +G GES PGPGG +YVG TGSV F V + + I DD G GGGIYNLG+V I G++ F+++ A +G AI+NG GAEF F A+A F D + D +G + N GYF+ SGPA VE AP V + T LSE S F
Sbjct: 7 ISAAALLLVSGSVCQGQLETCQDLLDAFALTASQDVVVEIQPGQDITCDSFTTMSMSANSLTVMTP---DGQSGSVGLNEVRFEVTDGAKLLWYPGASFTGTEYQD--VNGGAVYVGEGSSARFYDTLTTSEVGVRSVPEEGSDFASYQLIGGCVYVDGYFRVEGHASFVGCENSGGGESSPGPGGVMYVGETGSVLFAGEVTMQDVSIIDDEGNNGGGIYNLGKVNIKGNAVFQNLRAEAGGAIFNGSGAEFRFKKGATADFIDCLSFDGIGGAVFNAGYFKLSGPAEVVECRAPTFVVGSSGYTRLSEGSVF 315
BLAST of mRNA_E-siliculosus-1a_F_contig1431.2536.1 vs. uniprot
Match: A0A6H5JYQ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYQ0_9PHAE) HSP 1 Score: 246 bits (628), Expect = 2.270e-69 Identity = 145/318 (45.60%), Postives = 194/318 (61.01%), Query Frame = 3
Query: 21 VSPFSLLFLAG-VAHGLIETCEDLQAAFNLTQTQHVVDEIHPFQDIECETFTNMTMTSNTLTLNSSENLDNFFGSSSLTNVRLVVTNGAELIWETHVDFIGDEEVEHMVDGGAVFVGEGSTVHFLNDLEMEDIRIINERDEDSDFASFVRSGGCV----WTAGSFIVDGEATFTRCDITGAGESPPGPGGAIYVGATGSVSFNQGVAISETFITDDFGGQGGGIYNLGEVTIAGDSRFEDISANSGVAIYNGEGAEFYFTNDASAFFRDLSNRDSVGSGLTNLGYFEFSGPALFVEADAPVIVATETSQTILSENSAF 959
+S +LL ++G V G +ETC+DL AF LT +Q VV EI P QDI C+ FT M+M++N+LT+ ++ D GS L VR VT+GA+L W F + + V+GGAV+VGEGST F + L ++ + + +E SDFAS+ GGCV + G F V+G A+F C+ +G GES PGPGG +YVG TGSV F V + + I DD G GGGIYNLG+V I G++ F+++ A +G AI+NG GAEF F A+A F D + D G + N GYF+ SGPA VE AP V + T LSE S F
Sbjct: 237 ISAAALLLVSGSVCRGQVETCQDLLDAFALTASQDVVVEIQPGQDITCDNFTTMSMSANSLTVTAT---DGQSGSVGLNEVRFEVTDGAKLFWHPGASFTETDYQD--VNGGAVYVGEGSTARFYDTLTTSEVGVRSVPEEGSDFASYELIGGCVRAYTYVDGYFRVEGHASFVGCENSGGGESSPGPGGVMYVGETGSVLFAGEVTMQDVSIIDDEGNNGGGIYNLGKVNIKGNALFQNLRAEAGGAIFNGSGAEFRFKKGATADFIDCLSFDGTGGAVFNAGYFKLSGPAEVVECRAPTFVVGSSGYTRLSEGSVF 549 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1431.2536.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1431.2536.1 >prot_E-siliculosus-1a_F_contig1431.2536.1 ID=prot_E-siliculosus-1a_F_contig1431.2536.1|Name=mRNA_E-siliculosus-1a_F_contig1431.2536.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=350bp MFSETVSPFSLLFLAGVAHGLIETCEDLQAAFNLTQTQHVVDEIHPFQDIback to top mRNA from alignment at E-siliculosus-1a_F_contig1431:8663..10632+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1431.2536.1 ID=mRNA_E-siliculosus-1a_F_contig1431.2536.1|Name=mRNA_E-siliculosus-1a_F_contig1431.2536.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1970bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1431:8663..10632+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1431:8663..10632+ >mRNA_E-siliculosus-1a_F_contig1431.2536.1 ID=mRNA_E-siliculosus-1a_F_contig1431.2536.1|Name=mRNA_E-siliculosus-1a_F_contig1431.2536.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2100bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1431:8663..10632+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |