mRNA_E-siliculosus-1a_F_contig1430.2535.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1430.2535.1 vs. uniprot
Match: D7G075_ECTSI (DNA-directed RNA polymerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G075_ECTSI) HSP 1 Score: 898 bits (2320), Expect = 0.000e+0 Identity = 444/460 (96.52%), Postives = 444/460 (96.52%), Query Frame = 1
Query: 1 AMGTTALNMHERMDGLLYALVHPQKPMVTTRVLDLVHFDQARALLFTRNSGALTPYVPGGQNASIAVMSYSGYDIEDAIVLNRGSLDRGFGRCMVFRKHQAPIRKYPNGTQDKIVGKVRASEFPRGEDDPRWPRYKALDEDGICRVGARLDPGTIMVNKHSPASTSGSGPVSSDFASTPLSYKAPAESYVDKVVLTANENEDYLIKILLRQTRRPEVGDKFSSRHGQKGVCGIIVPQEDMPFADSGICPDLIMNPHGFPSRMTVGKMVELVAGKAGVLHGHQAYGTAFGEEHGSADRVHLCCQALVERGYSYVGKDMLTSGTGGEPLMNYIFAGPVFYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASALIMERLMISSDAFTANVCQGCGLLGYSGWCQNCRSPEKMADIRLPYACKLLFQELQSMNIVPRLKLQDF 1380
AMGTTALNMHERMDGLLYALVHPQKPMVTTRVLDLVHFDQ VPGGQNASIAVMSYSGYDIEDAIVLNRGSLDRGFGRCMVFRKHQAPIRKYPNGTQDKIVGKVRASEFPRGEDDPRWPRYKALDEDGICRVGARLDPGTIMVNKHSPASTSGSGPVSSDFASTPLSYKAPAESYVDKVVLTANENEDYLIKILLRQTRRPEVGDKFSSRHGQKGVCGIIVPQEDMPFADSGICPDLIMNPHGFPSRMTVGKMVELVAGKAGVLHGHQAYGTAFGEEHGSADRVHLCCQALVERGYSYVGKDMLTSGTGGEPLMNYIFAGPVFYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASALIMERLMISSDAFTANVCQGCGLLGYSGWCQNCRSPEKMADIRLPYACKLLFQELQSMNIVPRLKLQDF
Sbjct: 8 AMGTTALNMHERMDGLLYALVHPQKPMVTTRVLDLVHFDQ----------------VPGGQNASIAVMSYSGYDIEDAIVLNRGSLDRGFGRCMVFRKHQAPIRKYPNGTQDKIVGKVRASEFPRGEDDPRWPRYKALDEDGICRVGARLDPGTIMVNKHSPASTSGSGPVSSDFASTPLSYKAPAESYVDKVVLTANENEDYLIKILLRQTRRPEVGDKFSSRHGQKGVCGIIVPQEDMPFADSGICPDLIMNPHGFPSRMTVGKMVELVAGKAGVLHGHQAYGTAFGEEHGSADRVHLCCQALVERGYSYVGKDMLTSGTGGEPLMNYIFAGPVFYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASALIMERLMISSDAFTANVCQGCGLLGYSGWCQNCRSPEKMADIRLPYACKLLFQELQSMNIVPRLKLQDF 451
BLAST of mRNA_E-siliculosus-1a_F_contig1430.2535.1 vs. uniprot
Match: A0A835Z565_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z565_9STRA) HSP 1 Score: 665 bits (1716), Expect = 4.380e-227 Identity = 325/465 (69.89%), Postives = 377/465 (81.08%), Query Frame = 1
Query: 1 AMGTTALNMHERMDGLLYALVHPQKPMVTTRVLDLVHFDQARALLFTRNSGALTPYVPGGQNASIAVMSYSGYDIEDAIVLNRGSLDRGFGRCMVFRKHQAPIRKYPNGTQDKIVGKV---RASEFPRGEDDPRWPRYKALDEDGICRVGARLDPGTIMVNKHSPAST--SGSGPVSSDFASTPLSYKAPAESYVDKVVLTANENEDYLIKILLRQTRRPEVGDKFSSRHGQKGVCGIIVPQEDMPFADSGICPDLIMNPHGFPSRMTVGKMVELVAGKAGVLHGHQAYGTAFGEEHGSADRVHLCCQALVERGYSYVGKDMLTSGTGGEPLMNYIFAGPVFYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASALIMERLMISSDAFTANVCQGCGLLGYSGWCQNCRSPEKMADIRLPYACKLLFQELQSMNIVPRLKLQDF 1380
A+GT ALN +ER+DGLLY LV+PQKPM TRV+DL+HFD+ VP GQN+ IAVMSYSGYDIEDA VLN+GS+DRGFGRCMVFRKHQ ++ +P+GT D I G A +P+GE+D W +YKALD+DGI VGA+L+ T+++NK +P T S ++ LSYK + SYVDKV++ +NE E+ K+L+RQ RRPEVGDKFSSRHGQKGVCGIIVPQ DMPF++ GICPDLIMNPHGFPSRMTVGKM+EL+AGKAGVLHGHQAYGTAFGEE G+AD+V CQALV+RG+SY GKD+L SG GEP++NYIFAGPVFYQKLKHMVMDKMHARARGPRA LTRQPTEGRSRDGGLRLGEMERDCLIGYGASALIMERLMISSDAFTA VC+GCGLLGY GWCQ CR P+ M+ I +PYACKLLFQELQSMNIVPRL+LQ++
Sbjct: 733 AIGTIALNQYERIDGLLYTLVYPQKPMCKTRVIDLIHFDE----------------VPAGQNSIIAVMSYSGYDIEDASVLNKGSIDRGFGRCMVFRKHQVALKTHPSGTSDSINGPPDPNNADLYPKGENDRGWKKYKALDKDGIAYVGAKLEKDTVIINKMTPVGTDISADRAAATKMREASLSYKTSSPSYVDKVMIASNEVENQFFKVLVRQVRRPEVGDKFSSRHGQKGVCGIIVPQADMPFSEMGICPDLIMNPHGFPSRMTVGKMIELIAGKAGVLHGHQAYGTAFGEEFGNADKVTDICQALVDRGFSYCGKDILMSGINGEPVLNYIFAGPVFYQKLKHMVMDKMHARARGPRATLTRQPTEGRSRDGGLRLGEMERDCLIGYGASALIMERLMISSDAFTAYVCEGCGLLGYQGWCQGCRRPDSMSSISVPYACKLLFQELQSMNIVPRLRLQEY 1181
BLAST of mRNA_E-siliculosus-1a_F_contig1430.2535.1 vs. uniprot
Match: A0A7S3H3I2_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H3I2_9STRA) HSP 1 Score: 653 bits (1684), Expect = 4.600e-224 Identity = 315/466 (67.60%), Postives = 378/466 (81.12%), Query Frame = 1
Query: 1 AMGTTALNMHERMDGLLYALVHPQKPMVTTRVLDLVHFDQARALLFTRNSGALTPYVPGGQNASIAVMSYSGYDIEDAIVLNRGSLDRGFGRCMVFRKHQAPIRKYPNGTQDKIVGKVRASEFPRGEDDPRWPRYKALDEDGICRVGARLDPGTIMVNKHSPASTS------GSGPVSSDFASTPLSYKAPAESYVDKVVLTANENEDYLIKILLRQTRRPEVGDKFSSRHGQKGVCGIIVPQEDMPFADSGICPDLIMNPHGFPSRMTVGKMVELVAGKAGVLHGHQAYGTAFGEEHGSADRVHLCCQALVERGYSYVGKDMLTSGTGGEPLMNYIFAGPVFYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASALIMERLMISSDAFTANVCQGCGLLGYSGWCQNCRSPEKMADIRLPYACKLLFQELQSMNIVPRLKLQDF 1380
A+GTTA+N +ER D LLYA+++PQKPMV +R LDL++FDQ +PGGQNAS+AVMSYSGYDIEDAIVLNRGS+DRGFGRC+V +K +++YPNG+ D+ G V A +FP G +D R+ + + LD DGIC+VG L+P ++VNK SP++ G PV+S++ T L+YK + VDKV++T+NENE+++IK+L+RQ RRPEVGDKFSSRHGQKGVCG+I+ QEDMPF++ GICPDLIMNPHGFPSRMTVGKM+ELV+GKA V G Q YG+AFGEE G+ADRV + C LV+ GYSYVGKD+LTSG GEPL +Y+F GPVFYQKLKHMVMDKMHARA+GPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGAS LIMERLMISSDAFTANVC+ CGLLGY GWCQ CRS +K++ IRLPYACKLLFQELQSMNI RL+LQD+
Sbjct: 589 AIGTTAINQYERFDTLLYAMIYPQKPMVKSRTLDLINFDQ----------------LPGGQNASLAVMSYSGYDIEDAIVLNRGSMDRGFGRCLVAKKFVTTLKRYPNGSSDRSTGPVAADQFPGGAEDARFKKQEFLDPDGICQVGQVLEPNFVLVNKFSPSNQGDLMDGGGFNPVASEYKPTKLTYKGSGPATVDKVLITSNENENFIIKVLMRQVRRPEVGDKFSSRHGQKGVCGLILNQEDMPFSERGICPDLIMNPHGFPSRMTVGKMIELVSGKAAVFEGRQGYGSAFGEEFGNADRVEVSCATLVKHGYSYVGKDILTSGITGEPLESYVFMGPVFYQKLKHMVMDKMHARAKGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASNLIMERLMISSDAFTANVCENCGLLGYEGWCQRCRSGDKVSSIRLPYACKLLFQELQSMNIATRLRLQDY 1038
BLAST of mRNA_E-siliculosus-1a_F_contig1430.2535.1 vs. uniprot
Match: I2CNY0_NANGC (DNA-directed RNA polymerase subunit beta n=3 Tax=Monodopsidaceae TaxID=425072 RepID=I2CNY0_NANGC) HSP 1 Score: 652 bits (1681), Expect = 1.220e-221 Identity = 326/483 (67.49%), Postives = 378/483 (78.26%), Query Frame = 1
Query: 1 AMGTTALNMHERMDGLLYALVHPQKPMVTTRVLDLVHFDQARALLFTRNSGALTPYVPGGQNASIAVMSYSGYDIEDAIVLNRGSLDRGFGRCMVFRKHQAPIRKYPNGTQDKIVGK----VRASEFPRGED---------------DPRWPRYKALDEDGICRVGARLDPGTIMVNKHSPASTS----GSGPVSSDFASTPLSYKAPAESYVDKVVLTANENEDYLIKILLRQTRRPEVGDKFSSRHGQKGVCGIIVPQEDMPFADSGICPDLIMNPHGFPSRMTVGKMVELVAGKAGVLHGHQAYGTAFGEEHGSADRVHLCCQALVERGYSYVGKDMLTSGTGGEPLMNYIFAGPVFYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASALIMERLMISSDAFTANVCQGCGLLGYSGWCQNCRSPEKMADIRLPYACKLLFQELQSMNIVPRLKLQDF 1380
AMGT ALN +ER+D LLYA+V+PQKP+VTTR LDLV+F++ +PGGQNA +AVMSYSGYDIEDA+VLN+ SLDRGFGRC++ RKHQ +RKY NG D + G GE DPR R++ALD+DGIC+VG RL G++M+NK SP S + GSG + F TPLSYK PA S+VD+V++T+NE D L+K+ +RQ RRPEVGDKFSSRHGQKGVCGIIV QEDMPF D GICPDLIMNPHGFPSRMTVGK++E VAGKA V+ G QAYGTAFGE+ GSADRV C ALVE G+SYVGK+++TSGT GEPL+ YIF GPVFYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGAS+L+ ERLMISSDAFTA VC+ CGLLGY+GWCQ+CRS E+MADIRLPYACKLLFQELQSMN++P+LKL +F
Sbjct: 731 AMGTVALNQYERLDSLLYAMVYPQKPLVTTRTLDLVNFNE----------------LPGGQNAIVAVMSYSGYDIEDAVVLNKASLDRGFGRCLILRKHQTSLRKYANGAADNLRGPPEDTAAVCSGMGGEPSAAQSNLAGAYSIRRDPRLRRFEALDKDGICQVGERLGNGSVMINKESPISVADLNMGSGADPTPFKPTPLSYKGPAPSHVDQVLITSNEGGDLLVKVSVRQCRRPEVGDKFSSRHGQKGVCGIIVAQEDMPFNDDGICPDLIMNPHGFPSRMTVGKLIEFVAGKASVMIGRQAYGTAFGEDFGSADRVVACSGALVENGFSYVGKEIITSGTSGEPLLTYIFQGPVFYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASSLLTERLMISSDAFTATVCERCGLLGYAGWCQSCRSSERMADIRLPYACKLLFQELQSMNVIPKLKLMEF 1197
BLAST of mRNA_E-siliculosus-1a_F_contig1430.2535.1 vs. uniprot
Match: A0A7S2YIK7_9STRA (DNA-directed RNA polymerase n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YIK7_9STRA) HSP 1 Score: 617 bits (1592), Expect = 4.930e-217 Identity = 307/474 (64.77%), Postives = 359/474 (75.74%), Query Frame = 1
Query: 1 AMGTTALNMHERMDGLLYALVHPQKPMVTTRVLDLVHFDQARALLFTRNSGALTPYVPGGQNASIAVMSYSGYDIEDAIVLNRGSLDRGFGRCMVFRKHQAPIRKYPNGTQDKIVGKVRASEFPRGEDDPRWPRYKALDEDGICRVGARLDPGTIMVNKHSPA-STSGSGPVSSDFAS--------------TPLSYKAPAESYVDKVVLTANENEDYLIKILLRQTRRPEVGDKFSSRHGQKGVCGIIVPQEDMPFADSGICPDLIMNPHGFPSRMTVGKMVELVAGKAGVLHGHQAYGTAFGEEHGSADRVHLCCQALVERGYSYVGKDMLTSGTGGEPLMNYIFAGPVFYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASALIMERLMISSDAFTANVCQGCGLLGYSGWCQNCRSPEKMADIRLPYACKLLFQELQSMNIVPRLKLQD 1377
AMG A+N +ERMDGL+Y LV+P KPMV +R LDLV+FD+ +PGGQNA +AVMSYSGYDIEDAI+LN+ S+DRGFGRCMV RKHQ +R+Y NGT D+ G S F GE+D R+ RYKA+D+DGICRVG L+ G+IMVNK SP +TS G F + PL YK+ A SYVDKVV+T+NENE +L+K+++RQ RRPE+GDKF+SRHGQKGVCG+IVP++D+PF + G PDLIMNPHGFPSRMTVGK++EL+ GKA V G Q Y TAFGEE GSAD +AL+ G +Y GKD SGT GE L YIF+GPVFYQKLKHMV+DK HARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLI YGAS LIMERLM SSDAF+ANVC CGLL Y WCQ CRS EK+ADIRLPYACKLLFQELQSMN++PRL+L+D
Sbjct: 90 AMGCIAMNEYERMDGLIYTLVYPHKPMVKSRTLDLVNFDK----------------IPGGQNACMAVMSYSGYDIEDAIILNKASIDRGFGRCMVLRKHQTSVRRYANGTMDQTTGPPDPSSFQDGENDKRFQRYKAVDDDGICRVGELLENGSIMVNKQSPTDTTSNLGGAEFGFGTQGQAALARQVQYKHAPLPYKSSAPSYVDKVVITSNENEQFLVKVMVRQVRRPEIGDKFASRHGQKGVCGLIVPEQDLPFNEYGHAPDLIMNPHGFPSRMTVGKLLELLVGKAAVFEGRQGYSTAFGEEFGSADTAEAASEALIRNGLNYTGKDTFYSGTNGEALDGYIFSGPVFYQKLKHMVLDKAHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIAYGASNLIMERLMHSSDAFSANVCMTCGLLQYQNWCQYCRSGEKVADIRLPYACKLLFQELQSMNVLPRLRLKD 547
BLAST of mRNA_E-siliculosus-1a_F_contig1430.2535.1 vs. uniprot
Match: A0A6U4JF41_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4JF41_9STRA) HSP 1 Score: 635 bits (1637), Expect = 1.160e-215 Identity = 313/461 (67.90%), Postives = 374/461 (81.13%), Query Frame = 1
Query: 1 AMGTTALNMHERMDGLLYALVHPQKPMVTTRVLDLVHFDQARALLFTRNSGALTPYVPGGQNASIAVMSYSGYDIEDAIVLNRGSLDRGFGRCMVFRKHQAPIRKYPNGTQDKIVGKVRASEFPRGEDDPRWPRYKALDEDGICRVGARLDPGTIMVNKHSPASTSGSGPVS----SDFASTPLSYKAPAESYVDKVVLTANENEDYLIKILLRQTRRPEVGDKFSSRHGQKGVCGIIVPQEDMPFADSGICPDLIMNPHGFPSRMTVGKMVELVAGKAGVLHGHQAYGTAFGEEHGSADRVHLCCQALVERGYSYVGKDMLTSGTGGEPLMNYIFAGPVFYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASALIMERLMISSDAFTANVCQGCGLLGYSGWCQNCRSPEKMADIRLPYACKLLFQELQSMNIVPRLKL 1371
AMGT A+N +ER+D LLYA+V+PQKPMVTTRVLDL++F+Q VPGGQNA +AVMSYSGYDIEDA+V+N+GS+DRG+GRC+V +K QA IR+Y NG+ D+ VG ++ R ++D R+ ++ ALDEDG+ VG +++PG I++NK SP TS G + +++ TP+++K+ A VDKV++T+NENE +LIK+ LRQ RRPEVGDKFSSRHGQKGVCGIIVPQEDMPF + GICPDLIMNPHGFPSRMTVGKM+EL+ GKAGVL G QAYGTAFGE+ G+ADRV + LV G+SY GKD+LTSGT GE + +YIF GPVFYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGAS LIMERLM+SSD FTA VC+ CGLL GWCQNCRS E +AD+RLPYACKLLFQELQSMNI+PRL+L
Sbjct: 699 AMGTVAMNQYERIDTLLYAMVYPQKPMVTTRVLDLINFNQ----------------VPGGQNACVAVMSYSGYDIEDAVVINKGSIDRGYGRCLVLKKAQASIRRYANGSLDRTVGPPPMTDESR-KNDKRYRKFLALDEDGLPHVGEKVEPGQILINKESPLRTSDPGILEGGSVTEYKPTPVTWKSSASVNVDKVMITSNENEQFLIKVNLRQCRRPEVGDKFSSRHGQKGVCGIIVPQEDMPFNNDGICPDLIMNPHGFPSRMTVGKMIELLTGKAGVLRGRQAYGTAFGEDFGNADRVQFASEELVRHGFSYYGKDILTSGTSGEQICSYIFMGPVFYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASNLIMERLMLSSDQFTATVCEKCGLLQRPGWCQNCRSDEAIADVRLPYACKLLFQELQSMNIIPRLRL 1142
BLAST of mRNA_E-siliculosus-1a_F_contig1430.2535.1 vs. uniprot
Match: A0A7S2WH87_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WH87_9STRA) HSP 1 Score: 624 bits (1608), Expect = 3.230e-211 Identity = 309/473 (65.33%), Postives = 365/473 (77.17%), Query Frame = 1
Query: 1 AMGTTALNMHERMDGLLYALVHPQKPMVTTRVLDLVHFDQARALLFTRNSGALTPYVPGGQNASIAVMSYSGYDIEDAIVLNRGSLDRGFGRCMVFRKHQAPIRKYPNGTQDKIVGKVRASEFPRGEDDPRWPRYKALDEDGICRVGARLDPGTIMVNKHSPASTSGS--------GPVSSDFASTPLSYKAPAES--YVDKVVLTANENEDYLIKILLRQTRRPEVGDKFSSRHGQKGVCGIIVPQEDMPFADSGICPDLIMNPHGFPSRMTVGKMVELVAGKAGVLHGHQAYGTAFGEEHGSADRVHLCCQALVERGYSYVGKDMLTSGTGGEPLMNYIFAGPVFYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASALIMERLMISSDAFTANVCQGCGLLGYSG----WCQNCRSPEKMADIRLPYACKLLFQELQSMNIVPRLKLQD 1377
AMGT A+N +E M+ L+Y+LV+P KPMV TRVLDL++FD+ VPGGQNA++AVMSYS YDIEDAI+LN+ SLDRGFGRC+V RKHQ +R+YPNG D + G EF RG D RW RY LD+DG+C VG +L+PG +MVNK P + + + G V PLSYK + YVDKV++T NE E LIK+L+RQ RRPE+GDKFSSRHGQKGVCG+IV QE+MPF+D GICPDLIMNPHGFPSRMTVGK++ELV GKAG+L+G Q YGTAFGE+ G+ADRV C + LV+RG+SYV KD LTSG GEP+ YIF GPVFYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCL+GYG++ALI ERLM SSDAF+A+VC+ CG+LGY G WCQNCRS M DI+LPYACKLLFQELQSMNI+P+L L++
Sbjct: 696 AMGTVAMNQYELMNSLIYSLVYPHKPMVKTRVLDLINFDK----------------VPGGQNATLAVMSYSAYDIEDAIILNKASLDRGFGRCLVLRKHQTSLRRYPNGATDHLKGPPNPEEFHRGRQDTRWQRYAKLDQDGLCEVGEKLEPGQVMVNKVMPTNVNDNLDHPPTMGGAVMGAEKPAPLSYKGSVDHHVYVDKVLMTRNETEHCLIKVLVRQCRRPELGDKFSSRHGQKGVCGLIVNQENMPFSDFGICPDLIMNPHGFPSRMTVGKIIELVVGKAGILNGLQGYGTAFGEDFGNADRVVECSKELVKRGFSYVAKDYLTSGITGEPMKAYIFMGPVFYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLVGYGSAALISERLMTSSDAFSAHVCRKCGILGYLGERGMWCQNCRSSTAMTDIKLPYACKLLFQELQSMNIIPKLTLKE 1152
BLAST of mRNA_E-siliculosus-1a_F_contig1430.2535.1 vs. uniprot
Match: B7FVD4_PHATC (DNA-directed RNA polymerase subunit beta n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FVD4_PHATC) HSP 1 Score: 622 bits (1604), Expect = 6.140e-210 Identity = 303/471 (64.33%), Postives = 362/471 (76.86%), Query Frame = 1
Query: 1 AMGTTALNMHERMDGLLYALVHPQKPMVTTRVLDLVHFDQARALLFTRNSGALTPYVPGGQNASIAVMSYSGYDIEDAIVLNRGSLDRGFGRCMVFRKHQAPIRKYPNGTQDKIVGKVRASEFPRGEDDPRWPRYKALDEDGICRVGARLDPGTIMVNKHSPAST------------SGSGPVSSDFASTPLSYKAPAESYVDKVVLTANENEDYLIKILLRQTRRPEVGDKFSSRHGQKGVCGIIVPQEDMPFADSGICPDLIMNPHGFPSRMTVGKMVELVAGKAGVLHGHQAYGTAFGEEHGSADRVHLCCQALVERGYSYVGKDMLTSGTGGEPLMNYIFAGPVFYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASALIMERLMISSDAFTANVCQGCGLLGYSGWCQNCRSPEKMADIRLPYACKLLFQELQSMNIVPRLKLQD 1377
AMG+ ++N +ERMDGL+Y L++PQKPMV +R LDLV+FD +PGG NA IAVMSYSGYDIEDAI+LN+ ++DRGFGRCMV RKHQ +R+Y NGT D+ FP GEDD R+ RY A+D+DGICRVG +++ G++MVNK SPA T SG ++ + +SY+ A +YVDKV++T+NENE +LIK++LRQ RRPE+GDKF+SRHGQKGVCG+IVP+ED+PF + G PDLIMNPHGFPSRMTVGK++EL+ GKAG+ G Q Y +AFGEE GSAD +AL+ G +Y GKD+L SGT GEPL YIF+GPVFYQKLKHMV+DK HARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLI YG S LIMERLM SSDAF+ANVC CGLL Y GWCQ CRS EK+ADIRLPYACKLLFQELQSMN++PRL+LQD
Sbjct: 756 AMGSVSMNQYERMDGLIYTLIYPQKPMVKSRTLDLVNFDN----------------IPGGHNACIAVMSYSGYDIEDAIILNKAAVDRGFGRCMVLRKHQTSVRRYANGTMDRTCAPPDPGSFPDGEDDKRFARYMAIDKDGICRVGEKIENGSVMVNKESPADTTSNMAGVDFGFNSGMSMAHLNYKPSGVSYRGSASTYVDKVLITSNENEQFLIKVMLRQVRRPEIGDKFASRHGQKGVCGLIVPEEDLPFNEFGHVPDLIMNPHGFPSRMTVGKLLELLVGKAGLYEGRQGYSSAFGEEFGSADTAQSASEALLRNGLNYTGKDILYSGTNGEPLDAYIFSGPVFYQKLKHMVLDKAHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIAYGVSNLIMERLMHSSDAFSANVCLTCGLLQYEGWCQYCRSGEKVADIRLPYACKLLFQELQSMNVLPRLRLQD 1210
BLAST of mRNA_E-siliculosus-1a_F_contig1430.2535.1 vs. uniprot
Match: A0A024TUJ8_9STRA (DNA-directed RNA polymerase subunit beta n=12 Tax=Saprolegniaceae TaxID=4764 RepID=A0A024TUJ8_9STRA) HSP 1 Score: 621 bits (1601), Expect = 6.410e-210 Identity = 311/467 (66.60%), Postives = 369/467 (79.01%), Query Frame = 1
Query: 1 AMGTTALNMHERMDGLLYALVHPQKPMVTTRVLDLVHFDQARALLFTRNSGALTPYVPGGQNASIAVMSYSGYDIEDAIVLNRGSLDRGFGRCMVFRKHQAPIRKYPNGTQDKIVGK--VRASEFPRGEDDPRWPRYKALDEDGICRVGARLDPGTIMVNKHSPAS-----TSGSGPVSSDFASTPLSYKAPAESYVDKVVLTANENEDYLIKILLRQTRRPEVGDKFSSRHGQKGVCGIIVPQEDMPFADSGICPDLIMNPHGFPSRMTVGKMVELVAGKAGVLHGHQAYGTAFGEEHGSADRVHLCCQALVERGYSYVGKDMLTSGTGGEPLMNYIFAGPVFYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASALIMERLMISSDAFTANVCQGCGLLGYSGWCQNCRSPEKMADIRLPYACKLLFQELQSMNIVPRLKLQDF 1380
A+GT +N ER+D LLY +V+PQ PMV TRVLDLV+FDQ VP GQNA++AVMSYSGYDIEDAIVLN+ SLDRGFGRCMVF+K+Q +++YPN T D+IVG S F R RY +LD DGICRVG ++ G IMVNK SPA+ TS VS ++ +P+SYK Y+DKV+LT++E++ +LIK+L+RQTRRPE+GDKFSSRHGQKGVCG I QEDMPF D G+CPDLIMNPHGFPSRMTVGKM+ELVAGKAGVL G +A+GTAFGE++G+ADRV C + LV G++Y GKD LTSG GEP++ YIF GP++YQKLKHMVMDKMHARARGPRAVLTRQPTEGR+RDGGLRLGEMERDCLIGYGAS L++ERLM+SSDAFTANVCQGC +LGY GWCQ C+S EK+ DIR+PYACKLLFQELQ+MNI PRL LQ++
Sbjct: 733 AIGTIGMNQFERIDTLLYTMVYPQAPMVKTRVLDLVNFDQ----------------VPAGQNATVAVMSYSGYDIEDAIVLNKASLDRGFGRCMVFKKYQTVVKRYPNNTYDRIVGPPDFEGSSF-------RNQRYASLDADGICRVGGQVVSGGIMVNKESPANVDISITSEVQDVS--YSPSPVSYKNATPGYIDKVMLTSSESDQFLIKVLVRQTRRPEIGDKFSSRHGQKGVCGTIRNQEDMPFNDLGMCPDLIMNPHGFPSRMTVGKMIELVAGKAGVLSGRRAFGTAFGEDYGTADRVLDCSKELVSHGFNYAGKDYLTSGVTGEPILCYIFMGPIYYQKLKHMVMDKMHARARGPRAVLTRQPTEGRARDGGLRLGEMERDCLIGYGASMLLLERLMLSSDAFTANVCQGCQMLGYEGWCQYCKSEEKVVDIRIPYACKLLFQELQAMNIAPRLTLQEY 1174
BLAST of mRNA_E-siliculosus-1a_F_contig1430.2535.1 vs. uniprot
Match: A0A2P4YIY6_9STRA (DNA-directed RNA polymerase subunit beta (Fragment) n=3 Tax=Peronosporaceae TaxID=4777 RepID=A0A2P4YIY6_9STRA) HSP 1 Score: 609 bits (1571), Expect = 1.220e-209 Identity = 303/467 (64.88%), Postives = 361/467 (77.30%), Query Frame = 1
Query: 1 AMGTTALNMHERMDGLLYALVHPQKPMVTTRVLDLVHFDQARALLFTRNSGALTPYVPGGQNASIAVMSYSGYDIEDAIVLNRGSLDRGFGRCMVFRKHQAPIRKYPNGTQDKIVGKVRASEFPRGEDDP---RWPRYKALDEDGICRVGARLDPGTIMVNKHSPA----STSGSGPVSSDFASTPLSYKAPAESYVDKVVLTANENEDYLIKILLRQTRRPEVGDKFSSRHGQKGVCGIIVPQEDMPFADSGICPDLIMNPHGFPSRMTVGKMVELVAGKAGVLHGHQAYGTAFGEEHGSADRVHLCCQALVERGYSYVGKDMLTSGTGGEPLMNYIFAGPVFYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASALIMERLMISSDAFTANVCQGCGLLGYSGWCQNCRSPEKMADIRLPYACKLLFQELQSMNIVPRLKLQDF 1380
A+GT A+N ER+D LLY +V+PQ PMV TRVLDLV+FD+ VP GQNA +AVMSYSGYDIEDAIVLN+ SLDRGFGRCMVF+K+Q I+KY NG+ D+IVG R +Y +LD DGI RVG + G IM+NK P S G P+ ++ +P +YK P ++YVDKV+LT++E +L+K+L+RQTRRPE+GDKFSSRHGQKGVCG I QEDMPF D GICPDLIMNPHGFPSRMTVGKM+EL+AGKAGVL G +AYGTAFGE++GSAD V C + LV+ G++Y GKD LTSG GE + YIF GP++YQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGAS L+MERLM+SSDAF+A+VCQGC +LGY GWCQ+C+S EK+ IR+PYACKLLFQELQ+MNIVPRL L+++
Sbjct: 390 AIGTIAMNQFERIDTLLYTMVYPQMPMVKTRVLDLVNFDR----------------VPAGQNAIVAVMSYSGYDIEDAIVLNKASLDRGFGRCMVFKKYQTMIKKYANGSYDRIVGPPDFDSLAASGGAGVGFRNAKYSSLDADGISRVGGIVQNGAIMINKEQPTQFNDSVDGRDPLDVTYSPSPTTYKGPIQAYVDKVLLTSSEANHFLVKVLIRQTRRPEIGDKFSSRHGQKGVCGTIRNQEDMPFNDQGICPDLIMNPHGFPSRMTVGKMIELIAGKAGVLTGRRAYGTAFGEKYGSADHVLDCSRELVKNGFNYAGKDYLTSGITGEAIECYIFMGPIYYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLMERLMLSSDAFSADVCQGCRMLGYEGWCQHCKSEEKVVSIRIPYACKLLFQELQAMNIVPRLTLKEY 840 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1430.2535.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1430.2535.1 >prot_E-siliculosus-1a_F_contig1430.2535.1 ID=prot_E-siliculosus-1a_F_contig1430.2535.1|Name=mRNA_E-siliculosus-1a_F_contig1430.2535.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=460bp MGTTALNMHERMDGLLYALVHPQKPMVTTRVLDLVHFDQARALLFTRNSGback to top mRNA from alignment at E-siliculosus-1a_F_contig1430:20403..30324- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1430.2535.1 ID=mRNA_E-siliculosus-1a_F_contig1430.2535.1|Name=mRNA_E-siliculosus-1a_F_contig1430.2535.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=9922bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1430:20403..30324- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1430:20403..30324- >mRNA_E-siliculosus-1a_F_contig1430.2535.1 ID=mRNA_E-siliculosus-1a_F_contig1430.2535.1|Name=mRNA_E-siliculosus-1a_F_contig1430.2535.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2760bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1430:20403..30324- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |