mRNA_E-siliculosus-1a_F_contig143.2528.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig143.2528.1
Unique NamemRNA_E-siliculosus-1a_F_contig143.2528.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig143.2528.1 vs. uniprot
Match: D8LQ98_ECTSI (Cilia- and flagella-associated protein 53 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ98_ECTSI)

HSP 1 Score: 533 bits (1374), Expect = 2.680e-187
Identity = 309/315 (98.10%), Postives = 311/315 (98.73%), Query Frame = 1
Query:    1 ENARQEELHMAKIRERIAYLEAQEKAAEEKRERRNQLMRSDLNTQVAYNADRRRQLWEQTARDDLKELNELRAIVRAEQEKAEAKKKEAHARGAEVRDFNEARREMRVVAAEQAREQDLVLLEYAIEKDKAGEAEEKAKKEEEQRVLRQYNEYLKEQMAKEAADEAQYDEIRQEAETRIWDQRDAQLKAQNDAREALMKQVHRGRQEQIRLKALRDDEQVATDLEQARLDRESFLAEEERXXXXXXRKRQELLDNTAKLREQMAGARARAEREQQEEYLRVKQMEAYERRHRERLEKQAGVVITHHPLKHTQWYT 945
            ENARQEE HMAKIRERIAYLEAQEKAAEEKRERRNQLMRSDLNTQVAYNADRRRQLWEQTARDDLKELNELRAIVRAEQEKAEAKKKEAHARGAEVRDFNEARREMRVVAAEQAREQDLVLL+YAIEKDKAGEAEEKAKKEEEQRVLRQYNEYLKEQMAKEAADEAQYDEIRQEAETRIWDQRDAQLKAQNDAREALMKQVHRGRQEQIRLKALRDDEQ+ATDLEQARLDRESFLAEEER XXXX RKRQELLDNTAKLR QMAGARARAEREQQEEYLRVKQMEAYERRHRERLEKQAGVVITHHPLKHTQWYT
Sbjct:  174 ENARQEEFHMAKIRERIAYLEAQEKAAEEKRERRNQLMRSDLNTQVAYNADRRRQLWEQTARDDLKELNELRAIVRAEQEKAEAKKKEAHARGAEVRDFNEARREMRVVAAEQAREQDLVLLDYAIEKDKAGEAEEKAKKEEEQRVLRQYNEYLKEQMAKEAADEAQYDEIRQEAETRIWDQRDAQLKAQNDAREALMKQVHRGRQEQIRLKALRDDEQLATDLEQARLDRESFLAEEEREXXXXMRKRQELLDNTAKLRGQMAGARARAEREQQEEYLRVKQMEAYERRHRERLEKQAGVVITHHPLKHTQWYT 488          
BLAST of mRNA_E-siliculosus-1a_F_contig143.2528.1 vs. uniprot
Match: A0A835YTH0_9STRA (Cilia- and flagella-associated protein 53 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTH0_9STRA)

HSP 1 Score: 199 bits (507), Expect = 1.160e-56
Identity = 137/313 (43.77%), Postives = 192/313 (61.34%), Query Frame = 1
Query:    7 ARQEELHMAKIRERIAYLEAQEKAAEEKRERRNQLMRSDLNTQVAYNADRRRQLWEQTARDDLKELNELRAIVRAEQEKAEAKKKEAHARGAEVRDFNEARREMRVVAAEQAREQDLVLLEYAIEKDKAGEAEEKAKKEEEQRVLRQYNEYLKEQMAKEAADEAQYDEIRQEAETRIWDQRDAQLKAQNDAREALMKQVHRGRQEQIRLKALRDDEQVATDLEQARLDRESFLAEEERXXXXXXRKRQELLDNTAKLREQMAGARARAEREQQEEYLRVKQMEAYERRHRERLEKQAGVVITHHPLKHTQWYT 945
            A ++  + A+I ER+A+LEAQE+  EE R R  ++++  L  QV YNA RR  L +++A +D  EL+ELRAIV AE++                         +R  AA   +++D+ LL+YA+++++AGEAEE  K++ E+  +RQY  YLK QM +EA D  + D  + +AET++W+ R+A+   + DAR ALM QVH  RQEQIR + L D  + A   EQA  DRE+F   E +       +R  LLD  AKLR Q+    A   RE+QEEYL +K+MEA ER H+ RLE Q+G V+ HHPLKHTQWYT
Sbjct:  177 AEEDAQYTAQIYERMAWLEAQEREREETRRRTAEVVKDGLTAQVRYNAARRMALEQRSAEEDRLELDELRAIVAAEEQXXXXXXXXXXXXXXXXXXXXXXXXXLREEAAALEQQRDMALLKYAVDRERAGEAEEHRKRDAEREAMRQYTAYLKAQMEREAEDAGKLDTAQADAETKMWEAREAEQAKRADARRALMAQVHAARQEQIRARRLADAAERAALNEQAAFDREAFARAEAQEADKERERRAALLDQAAKLRGQVDERAAARARERQEEYLSMKRMEACEREHKARLEAQSGKVVLHHPLKHTQWYT 489          
BLAST of mRNA_E-siliculosus-1a_F_contig143.2528.1 vs. uniprot
Match: A0A7S3YAB2_HETAK (Cilia- and flagella-associated protein 53 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YAB2_HETAK)

HSP 1 Score: 180 bits (456), Expect = 3.180e-49
Identity = 132/310 (42.58%), Postives = 185/310 (59.68%), Query Frame = 1
Query:   16 EELHMAKIRERIAYLEAQEKAAEEKRERRNQLMRSDLNTQVAYNADRRRQLWEQTARDDLKELNELRAIVRAEQEKAEAKKKEAHARGAEVRDFNEARREMRVVAAEQAREQDLVLLEYAIEKDKAGEAEEKAKKEEEQRVLRQYNEYLKEQMAKEAADEAQYDEIRQEAETRIWDQRDAQLKAQNDAREALMKQVHRGRQEQIRLKALRDDEQVATDLEQARLDRESFLAEEERXXXXXXRKRQELLDNTAKLREQMAGARARAEREQQEEYLRVKQMEAYERRHRERLEKQAGVVITHHPLKHTQWYT 945
            +E +MA +   +A LE +E+  +E   + N  M +DL+ QVA NA+RR  L    AR D +E+                      A GA VR+FN+A+   R  A E  R +DL+LLE+A   +  G+AEE+ K+ EE+RV+R+Y+ YL+EQM KEA DE+  +  R   E RIWDQR+A L+AQ DAR  LM QV  GR+EQ+ LK L  +E+   D E+A   +  F   E+        +RQ+L DN  +L+ Q+ G   +   E+QE+YL  KQME  ER+H++RL++QAGVV T+ PLKHTQWYT
Sbjct:  176 DEQYMAGVMGHVAALELKERGVQEALRQANAKMVADLDDQVAKNAERRSALAAARARGDQEEIXXXXXXXXXXXXXXXXXXXXLVAAGAAVREFNQAKAAERGRAKELERGRDLLLLEHAQRMEARGQAEEERKRAEEKRVMREYHAYLQEQMVKEAEDESAIEAHRLREENRIWDQREADLRAQADARARLMGQVKAGREEQVYLKGLAAEEERKRDQEEAMRAKIEFELMEQEAAAKQAGRRQQLADNAQRLKAQIDGNAHQRRLEEQEKYLSAKQMEMMERKHQQRLKEQAGVVETYKPLKHTQWYT 485          
BLAST of mRNA_E-siliculosus-1a_F_contig143.2528.1 vs. uniprot
Match: A0A7S1XRQ7_9STRA (Cilia- and flagella-associated protein 53 n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XRQ7_9STRA)

HSP 1 Score: 148 bits (374), Expect = 2.210e-37
Identity = 119/304 (39.14%), Postives = 175/304 (57.57%), Query Frame = 1
Query:   46 RIAYLEAQEKAAEEKRERRNQLMRSDLNTQVAYNADRRRQLWEQTARDDLKELNELRAIVRAEQEKAEAKKKEAHARGAEVRDFNEARREMRVVAAEQAREQDLVLLEYAIEKDKAGEAEEKAKKEEEQRVLRQYNEYLKEQMAKEAADEAQYDEIRQEAETRIWDQRDAQLKAQNDAREALMKQVHRGRQEQIRLKALRDDEQVATDLEQARLDRESFLAEEERXXXXXXRKRQELLDNTAKLREQMA-GARARA---EREQQEEYLRVKQMEAYERRHRERLEKQAGVVITHHPLKHTQWYT 945
            R+  LE +E A    R   N+  R DL+ QV    +RR QL E   +D  +EL EL A ++ ++++   + +EAHARG EVR FNEAR  MR   A   R+QDL+LL+Y +E+++   AEE+AK++ E    R+Y E+LKE M KEA D+++ D IR+  E R+W++RDA+L+AQ +AR  LM+ VH GRQEQI+ K  RD      + EQ R D        +       +++++  DN   L +Q+A   +AR    ERE+QE       M A +    +R   +AG V  ++P  H+ WYT
Sbjct:  185 RMKVLEDREIADAHARHEANEACRRDLDEQVRIKGERRLQLIESMRKDAEEELTELAAAIQRDEDEQRRRTEEAHARGREVRAFNEARLNMRQERAALERQQDLLLLQYGMEQERKRIAEEQAKRQLEINATREYTEHLKELMIKEAQDDSEVDAIREREENRVWEKRDAELRAQTEARRRLMEIVHAGRQEQIKAKRERDAIDRILEEEQERNDAAELQKGLQMDREAAEKRKRDAQDNNTLLLKQIAMREQARLDELERERQEAEKWRADMRAVD----QRAAAEAGEVKLYYPRSHSNWYT 484          
BLAST of mRNA_E-siliculosus-1a_F_contig143.2528.1 vs. uniprot
Match: A0A7S2STN1_9STRA (Cilia- and flagella-associated protein 53 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STN1_9STRA)

HSP 1 Score: 134 bits (338), Expect = 4.590e-34
Identity = 99/257 (38.52%), Postives = 155/257 (60.31%), Query Frame = 1
Query:  199 ELNELRAIVRAEQEKAEAKKKEAHARGAEVRDFNEARREMRVVAAEQAREQDLVLLEYAIEKDKAGEAEEKAKKEEEQRVLRQYNEYLKEQMAKEAADEAQYDEIRQEAETRIWDQRDAQLKAQNDAREALMKQVHRGRQEQIRLKALRDDEQVATD--------LEQARLDRESFLAEEERXXXXXXRKRQELLDNTAKLREQMAGARARAEREQQEEYLRVKQMEAYERRHRERLEKQAGVVITHHPLKHTQWYT 945
            EL ELRA +  ++++A+     A  RG + R FNE+R  +R  AA++ R++DLVLL+YA++K++A    E  KK EEQ   ++Y EYL+ QM KEA D A  D +R+  E R W +R+A+ K ++DAR  LM+  + GRQ QIR +  R+ +++  D         +QA LDR    AE+E       +++Q + +N + +R Q+   R +  +E+Q++YL  K M+  E  H+++L +QAG +  H P KHT WYT
Sbjct:   15 ELTELRAAIARDEQEAQRHLLSAKQRGKQTRHFNESRLHIRQEAADRERQEDLVLLKYAMDKERAEIDAELRKKREEQETTKRYQEYLRAQMIKEAQDTALADSLRKADEDRNWAKREAEQKRRDDARANLMQVTNDGRQRQIRERLERETKELEEDRGDGQRFAADQAELDR--IEAEKE------AKRKQNVAENLSGIRSQIEIRRQQQMKEEQDKYLEAKIMQKVEAEHKKKLSEQAGTLRLHRPKKHTAWYT 263          
BLAST of mRNA_E-siliculosus-1a_F_contig143.2528.1 vs. uniprot
Match: A0A4D9D339_9STRA (Cilia- and flagella-associated protein 53 n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D339_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 3.080e-20
Identity = 82/251 (32.67%), Postives = 131/251 (52.19%), Query Frame = 1
Query:  187 DDLKELNELRAIVRAEQEKAEAKKKEAHARGAEVRDFNEARREMRVVAAEQAREQDLVLLEYAIEKDKAGEAEEKAKKEEEQRVLRQYNEYLKEQMAKEAADEAQYDEIRQEAETRIWDQRDAQLKAQNDAREALMKQVHRGRQEQIRLKALRDDEQVATDLEQARLDRESFLAEEERXXXXXXRKRQELLDNTAKLREQMAGARARAEREQQEEYLRVKQMEAYERRHRERLEKQAGVVITHHPLKHTQW 939
            +D +E+ +++  +  E+E AE +KK     G ++R FNE R  +    AE+ R+QD+ LL YA+E++    A EK +  + +   R Y +YL+E M KE  DE + + IR   E  +W+QR+A L+ +   ++AL  ++   RQ+Q+  KAL   E+   +            AEEE         R  +L N   L +Q    R R   E+Q+EYLR K ++  E   + R ++QAGV   H PL+  +W
Sbjct:   80 EDAREIAQIQIELTREKELAEKRKKADWLEGQKIRAFNEQRLGLMRARAEEERQQDMTLLNYALEEEAKSVAAEKDRGVKAREESRLYRKYLEELMQKEVEDEREIESIRLAKEEEVWEQREAVLQEREAKKKALWLEIDATRQQQLLYKALTAAEESEAESTLVGRWEAEQKAEEEECQRSKEAHRLAILSNREVLEKQTKALRHRVALEEQQEYLRTKHVQKEEADQQRRRQEQAGVARIHFPLRSQKW 330          
BLAST of mRNA_E-siliculosus-1a_F_contig143.2528.1 vs. uniprot
Match: A0A7S0GFB1_9STRA (Cilia- and flagella-associated protein 53 n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GFB1_9STRA)

HSP 1 Score: 100 bits (248), Expect = 5.610e-20
Identity = 82/222 (36.94%), Postives = 126/222 (56.76%), Query Frame = 1
Query:  304 ARREMRVVAAEQAREQDLVLLEYAIEKDKAGEAEEKAKKEEEQRVLRQYNEYLKEQMAKEAADEAQYDEIRQEAETRIWDQRDAQLKAQNDAREALMKQVHRGRQEQIRLKALRDDEQVATDLEQARLDRESFLAEEERXXXXXXRKRQELLDNTAKLREQMAGARARAEREQQEE--------YLRVKQMEAYERRHRERLEKQAGVVITHHPLKHTQWYT 945
            AR + R+    + RE DLVLL+YA++K+       K+KKE E+++ R+Y  +LK+QM KE  +  + D+IR     +IW +RD  L+AQ DAR  L+K+V +GRQEQ+R+K L ++E+     EQAR   +    EEE        +R E   N  K  E+M   +  A+  +Q+E        +LR K  EA E + + RL++     + ++PLK+T WYT
Sbjct:  239 ARYQQRIEVKARERENDLVLLKYALKKESDSTDCNKSKKENEKKLSREYEAFLKDQMQKEKDENLKVDDIRATEMEKIWVKRDEALQAQADARGNLLKEVQKGRQEQMRIKILVEEEEKEASAEQARFVAQKLKVEEEN-------ERDENSRNKVKTVERMRANKYLADHNKQQEQAKESEKYHLRKKMQEA-ETKRQMRLDQLKCNPVAYYPLKNTNWYT 452          
BLAST of mRNA_E-siliculosus-1a_F_contig143.2528.1 vs. uniprot
Match: A0A6G0XRX0_9STRA (Cilia- and flagella-associated protein 53 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XRX0_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 1.820e-16
Identity = 83/231 (35.93%), Postives = 132/231 (57.14%), Query Frame = 1
Query:  256 KKEAHARGAEVRDFNEARREMRVVAAEQAREQDLVLLEYAIEKDKAGEAEEKAKKEEEQRVLRQYNEYLKEQMAKEAADEAQYDEIRQEAETRIWDQRDAQLKAQNDAREALMKQVHRGRQEQIRLKALRDDEQVATDLE-QARLDRESFLAEEERXXXXXXRKRQELLDNTAKLREQMAGARARAEREQQEEYLRVKQMEAYERRHRERLEKQAGVV-ITHHPLKHTQWY 942
            K++A AR  +V+ FN+ R EM    A + RE D  LL+ A++K+   EA E+  +E+ +R   +Y   L++QMA EA D +  D IR++ E  +W +RDA+ +A+ DARE L+ QV + RQEQI  K     +  A D    AR+ RES  A ++       RK +E   + A L  Q A A+  AE+++Q E+L +K+M   E++H+ +L   A    + ++  K ++WY
Sbjct:  241 KRKAIARATDVKKFNQKRAEMAEREARREREYDTQLLKLALQKEADTEARERQLQEKFKRDQLEYQAMLRQQMATEAEDLSYLDAIRKKMEDEVWAKRDAEHRAEQDAREELLAQVVQSRQEQIVRKGQIKQQDAANDAAYMARMQRESDEALQKELLEQEKRK-EEAKRHQADLMAQKAAAKLAAEKQKQAEFLDMKRMTLTEKQHQAKLAALAKQPPVFNYRRKTSEWY 470          
BLAST of mRNA_E-siliculosus-1a_F_contig143.2528.1 vs. uniprot
Match: A0A482SE17_9ARCH (Cilia- and flagella-associated protein 53 n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SE17_9ARCH)

HSP 1 Score: 82.8 bits (203), Expect = 4.850e-15
Identity = 78/221 (35.29%), Postives = 109/221 (49.32%), Query Frame = 1
Query:  295 FNEARREMRVVAAEQAREQDLVLLEYAIEKDKAGEAEEKAKKEEEQRVLRQYNEYLKEQMAKEAADEAQYDEIRQEAETRIWDQRDAQLKAQNDAREALMKQVHRGRQEQIRLKALRDDEQVATDLEQARLDRESFLAEEERXXXXXXRKRQELLDNTAKLREQMAGARARAEREQQEEYLRV----KQMEAYERRHRERLEKQAGVVITHHPLKHTQWYT 945
            FN   R+ R   +   REQD VLL+YA+ K+    A E+AK+  +++   +Y +YL+EQM KEA D A  DEIR+  E ++W  RD  L+A++DAR  LMK V  GRQEQIR K    DE+   + E  ++    FL E +        + +                                   KQM+  ER H++RL +QAG V    PL+  QWYT
Sbjct:    3 FNAENRKYREEESLVEREQDGVLLDYALRKEAEQIAAEEAKRSGQRQAALRYRKYLEEQMVKEAEDTAFVDEIRKREEEKVWKARDDALRARDDARNYLMKMVDEGRQEQIRYK----DERERAEKEHDKIFARKFLDEADEAVRKERAEAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKQMKHMERMHQQRLAEQAGSVRLAFPLQKNQWYT 219          
BLAST of mRNA_E-siliculosus-1a_F_contig143.2528.1 vs. uniprot
Match: W4FWZ1_9STRA (Cilia- and flagella-associated protein 53 n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FWZ1_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 6.680e-13
Identity = 76/231 (32.90%), Postives = 131/231 (56.71%), Query Frame = 1
Query:  256 KKEAHARGAEVRDFNEARREMRVVAAEQAREQDLVLLEYAIEKDKAGEAEEKAKKEEEQRVLRQYNEYLKEQMAKEAADEAQYDEIRQEAETRIWDQRDAQLKAQNDAREALMKQVHRGRQEQIRLKALRDDEQVATDLE-QARLDRESFLAEEERXXXXXXRKRQELLDNTAKLREQMAGARARAEREQQEEYLRVKQMEAYERRHRERLEKQAGVVIT-HHPLKHTQWY 942
            K++A AR  +V+ FN+ R ++    A +  E D  LL+ A+ ++   +A E+A +E+ +R   +Y   L++QMA EA D +  D IR++ E  +W +RDA+ +A++DAR+ L+ QV + RQ+Q+  K LR     A D    AR+ RES  A ++       RK  +   N   +  Q A  +A  E+++Q E+L +K+M   E++H+ +L + A    T ++  K ++WY
Sbjct:  294 KRKAVARAMDVKKFNQTRSDLTERQARREHEYDTQLLQLALRQEAETDARERALQEKFKRDQLEYQAMLRKQMATEAEDLSYLDAIRKKMEDEVWAKRDAEHRAEDDARQELLAQVLQSRQDQMERKELRKAADAAADAAYMARMQRESDEALQKELTDQDKRK-WDAKRNQVDVVAQKAQTKALMEKQKQAEFLDMKRMALSEKQHKLKLAQLATQQPTLNYRRKTSEWY 523          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig143.2528.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
D8LQ98_ECTSI2.680e-18798.10Cilia- and flagella-associated protein 53 n=2 Tax=... [more]
A0A835YTH0_9STRA1.160e-5643.77Cilia- and flagella-associated protein 53 n=1 Tax=... [more]
A0A7S3YAB2_HETAK3.180e-4942.58Cilia- and flagella-associated protein 53 n=1 Tax=... [more]
A0A7S1XRQ7_9STRA2.210e-3739.14Cilia- and flagella-associated protein 53 n=1 Tax=... [more]
A0A7S2STN1_9STRA4.590e-3438.52Cilia- and flagella-associated protein 53 n=1 Tax=... [more]
A0A4D9D339_9STRA3.080e-2032.67Cilia- and flagella-associated protein 53 n=1 Tax=... [more]
A0A7S0GFB1_9STRA5.610e-2036.94Cilia- and flagella-associated protein 53 n=1 Tax=... [more]
A0A6G0XRX0_9STRA1.820e-1635.93Cilia- and flagella-associated protein 53 n=1 Tax=... [more]
A0A482SE17_9ARCH4.850e-1535.29Cilia- and flagella-associated protein 53 n=1 Tax=... [more]
W4FWZ1_9STRA6.680e-1332.90Cilia- and flagella-associated protein 53 n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig143contigE-siliculosus-1a_F_contig143:1889..6997 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size921
Model size948
Exons7
Hectar predicted targeting categoryother localisation
BRITEko00000,ko04121
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.KLT
Ec32 orthologEc-26_005610.1
Ec32 ortholog descriptionconserved unknown protein
EggNOG OGsKOG4441@1,KOG4441@2759
EggNOG free text desc.protein ubiquitination
KEGG koko:K10465
Seed eggNOG ortholog44056.XP_009040309.1
Seed ortholog evalue1.8e-13
Seed ortholog score83.6
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig143.2528.1prot_E-siliculosus-1a_F_contig143.2528.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig143 1916..6997 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927943.6310782-UTR-E-siliculosus-1a_F_contig143:1888..19151622927943.6310782-UTR-E-siliculosus-1a_F_contig143:1888..1915Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig143 1889..1915 +
1696318747.1862843-UTR-E-siliculosus-1a_F_contig143:1888..19151696318747.1862843-UTR-E-siliculosus-1a_F_contig143:1888..1915Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig143 1889..1915 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927943.6435716-CDS-E-siliculosus-1a_F_contig143:1915..20231622927943.6435716-CDS-E-siliculosus-1a_F_contig143:1915..2023Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig143 1916..2023 +
1696318747.1975567-CDS-E-siliculosus-1a_F_contig143:1915..20231696318747.1975567-CDS-E-siliculosus-1a_F_contig143:1915..2023Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig143 1916..2023 +
1622927943.655547-CDS-E-siliculosus-1a_F_contig143:2532..26821622927943.655547-CDS-E-siliculosus-1a_F_contig143:2532..2682Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig143 2533..2682 +
1696318747.207091-CDS-E-siliculosus-1a_F_contig143:2532..26821696318747.207091-CDS-E-siliculosus-1a_F_contig143:2532..2682Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig143 2533..2682 +
1622927943.6700833-CDS-E-siliculosus-1a_F_contig143:3858..40081622927943.6700833-CDS-E-siliculosus-1a_F_contig143:3858..4008Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig143 3859..4008 +
1696318747.2175663-CDS-E-siliculosus-1a_F_contig143:3858..40081696318747.2175663-CDS-E-siliculosus-1a_F_contig143:3858..4008Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig143 3859..4008 +
1622927943.6814406-CDS-E-siliculosus-1a_F_contig143:4544..47091622927943.6814406-CDS-E-siliculosus-1a_F_contig143:4544..4709Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig143 4545..4709 +
1696318747.2341583-CDS-E-siliculosus-1a_F_contig143:4544..47091696318747.2341583-CDS-E-siliculosus-1a_F_contig143:4544..4709Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig143 4545..4709 +
1622927943.6929748-CDS-E-siliculosus-1a_F_contig143:5362..55121622927943.6929748-CDS-E-siliculosus-1a_F_contig143:5362..5512Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig143 5363..5512 +
1696318747.2455444-CDS-E-siliculosus-1a_F_contig143:5362..55121696318747.2455444-CDS-E-siliculosus-1a_F_contig143:5362..5512Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig143 5363..5512 +
1622927943.7067676-CDS-E-siliculosus-1a_F_contig143:6030..61491622927943.7067676-CDS-E-siliculosus-1a_F_contig143:6030..6149Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig143 6031..6149 +
1696318747.2549138-CDS-E-siliculosus-1a_F_contig143:6030..61491696318747.2549138-CDS-E-siliculosus-1a_F_contig143:6030..6149Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig143 6031..6149 +
1622927943.723392-CDS-E-siliculosus-1a_F_contig143:6918..69971622927943.723392-CDS-E-siliculosus-1a_F_contig143:6918..6997Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig143 6919..6997 +
1696318747.2642736-CDS-E-siliculosus-1a_F_contig143:6918..69971696318747.2642736-CDS-E-siliculosus-1a_F_contig143:6918..6997Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig143 6919..6997 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig143.2528.1

>prot_E-siliculosus-1a_F_contig143.2528.1 ID=prot_E-siliculosus-1a_F_contig143.2528.1|Name=mRNA_E-siliculosus-1a_F_contig143.2528.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=307bp
MAKIRERIAYLEAQEKAAEEKRERRNQLMRSDLNTQVAYNADRRRQLWEQ
TARDDLKELNELRAIVRAEQEKAEAKKKEAHARGAEVRDFNEARREMRVV
AAEQAREQDLVLLEYAIEKDKAGEAEEKAKKEEEQRVLRQYNEYLKEQMA
KEAADEAQYDEIRQEAETRIWDQRDAQLKAQNDAREALMKQVHRGRQEQI
RLKALRDDEQVATDLEQARLDRESFLAEEEREREKEMRKRQELLDNTAKL
REQMAGARARAEREQQEEYLRVKQMEAYERRHRERLEKQAGVVITHHPLK
HTQWYT*
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mRNA from alignment at E-siliculosus-1a_F_contig143:1889..6997+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig143.2528.1 ID=mRNA_E-siliculosus-1a_F_contig143.2528.1|Name=mRNA_E-siliculosus-1a_F_contig143.2528.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=5109bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig143:1889..6997+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GAGAACGCAAGGCAAGAGGAGTTGCACATGGCAAAGATCCGCGAGCGCAT CGCCTACCTGGAGGCACAGGAGAAAGCCGCCGAAGAAAAGAGGGAAAGGA GGAACCAGCTCATGCGCAGCGACCTCAACACGCAGGTTGGTGACCTCAAT TTAGTGCTTCTTTTGTCAATTCCTCTCCGGGGGAGTTCCGGCTATCCTCA GAGGCGTGTTGCTGAGAGTAGTCGTCGACCGGCATGTTGGTGTTTCGTCG TAGGGAGGCGTGCTTGAACACAACTTGTTTTGTGTGGAATTTTGGTTTGT TTCGCTCTCCCGCATCTCACGGCGTGGCGGCCCTCCGACTCATACATGTG CGCTCGGGGGGTCAAAAGCGATTTTGTCAGGAAACTGGATTACTTTGAGG CCTGTCAGACCCAAGCAAGTCAACATCAACTTTGGTCGAGTGAACAACAC CCCCTCTTTGCATCACTCTTGGTGTCTGCATTCTTCCGTGGCCACCTCAT TGTACGTGAGGGTGGTGCGATTGTTGAACATGCCAACACCAACCACCACC ACCAACAACAGAAATGGACCGAGAAAAAACGACTGCGCAACATCACAACA CAAGCACGCTATTGTACATTCCCGCCCTTTCAACACACACGCAGGTGGCG TACAACGCCGACCGTCGTCGACAGCTGTGGGAACAGACCGCTCGGGACGA CCTAAAAGAGCTCAATGAGCTCAGGGCGATCGTCAGGGCCGAGCAAGAGA AGGCGGAGGCGAAAAAGAAGGAGGCCCACGCGCGCGGGGCAGAGGTAAGC TCGGAGGTTTATTTTTGCTGTGGTGGTTGCTGTCCAGGGGTTCCCAGGCG GCACGCGTTCTTTGGTTCGGTGTCGTGCATGTTGTGTGTGGCCCAAGAGC GCTGGTGATGTTCCTCGCTGGCAATGTCCCTGTTCGAGCACGGCAGTGTG CGATGAAAACGCAGGGGTGGATTGATTCTTGTGGCCGATCGATCCGGCAC AACTGCAGACAGGTACAGCCGTGAGTATACGGTACACATCCATTATGGTG GTAAGGCAATGGAGGTGACGGATTTTGTCATCATGGGGCGCCTGTACGCT TATTGGGCAGCATCCCTGCTCGCTGGTGATCGATATGACGATACGACAAC GGTCTTGCAAAACGATAACTAAGCCTCAAACCATCGAGCTTTTGGCTAGA CGAACGAGGGAGACACTCCATAGTACCTACACCAACGATTTTCATTACCA TCACACCTGCAATTTATCGCCTTGAATTACGAGCGGGTGCGGGGAGCACC TCACACACACACACACACATGTTGCTGTGCGTACTGACGTCACGAAACAG GGCTACGATACCTCCGCTGCTCTAGATAGAAGCACCTTCAAACGTTTCCT CATATAGACCTTTTCCTGGACGTCTCTCGTTGTGTGACTCTGCGAACGTT TCATCGGGAAAGCTACGAGCTTGCACGAGGAGGCTACGCAGACGCGATAT TCAACATGATTTTCCGACCTCACTCTCGGTCTTCCTTGCATTCTCCTTCG TCTCTCGGACAAGGCACGCCCCCCCCCCCCCGGTAGACTTCCTCTCACAT ACGCCGCATTGTAGCGCTGCATGTTTAATCGCTCTATGTTTGCCTCATTC AACGACGCGCTCATTAACTGATTCGTCCTGCCTTGTCCGCCGTGTGATGC TCGCACCGACCGGTAGCGTTCTCCTACATGGGTCAGCGTCGGCCACTCGT ACTAACGATGCCAAATAGATGCGACTGCTTTCTCCCAGCAGATGCTTGAG ACGCTCCGCTCCGCCGCGTGCTCAGCTTTCTCGCTCTTTTCTCCTTTCCT TGACCGAGACGCTTCTTGCCGCGACATGTGGGCGTTCGTTTTTACAGTAC TCTCGCGTGTGCTCCTTCGGTCAACCACCGGCTGTTCTGATCGGTTGATT TTTGACGTGGGGCCCCGCAGGTGCGAGACTTCAACGAGGCCAGGCGCGAG ATGCGTGTGGTGGCGGCGGAGCAGGCTCGCGAGCAGGACCTGGTGCTGCT GGAGTACGCCATCGAGAAGGACAAGGCCGGGGAGGCGGAGGAGAAGGCGA AGAAGGAGGAGGAGCAGAGGGTAGGAGACGATCTGGGGGGGGAGGGAGGA CAATGCTGTTTACCATTGCCGTGTTTGTGTGTTCCTTGATCTATCTCTAG GAGGAGCCCCGGTAATTTCATACTCCTGCTGTTAGGCACACCGCCGGAAG TCGGGTGCTCTTTATCGCGGTCCTCTTCTCTTTGAATTTTTGAGCCACCT TTCGCATCTTGGTGTAGCAACGTAGAGATGGGGGGGCAATGCCCGATATT CTCCGTGTTTGTTCTTTCTTGCATTTGACACGATCAGAGCTATACCATTT TTGTTGTTTCATGTTTGCCGGTTTCGATCGAATGCTGTTCGCAGGTGTTC AGCAATGTTCTGTTCCGAGTAGAGACATGAAGGAGGCACACACCAACTTC CCCGCACAGCACGATTTGTTCAGTTGTTTCCTGTCTTGGACCTCATGAAA CTCGTTTCCCCTACAACCCACCTATGTTTGATTAGCCTCGTTTCCCCTCT ACTCCATATGTGTGATGCCCATGGTTTTCGTCGCTGTATCCGTCGTACGG CGGCAGGTGCTGCGCCAGTACAACGAGTATCTCAAGGAGCAGATGGCCAA GGAGGCCGCGGACGAGGCTCAGTACGACGAGATCAGACAGGAGGCGGAGA CTCGCATCTGGGACCAGAGGGACGCGCAGCTCAAGGCGCAGAACGACGCT AGGGAGGCCCTCATGAAGCAGGTGTTGTGGTGGTTGTTGTTATTATTGTT GTTGATGTTATTGTTGTTGTTGTTGTCGCCTCCATGTTCAACACCATTCA ACATGGACCGGGCCTCTTAAGATCCGGAACTACTTTTCCCGAACAAGGCA GGAGCAGTTCTCAACAACAAACCTGTATTCTGCAGTTGTGAGAAACACCT CAAAGCAATTACTGACAGCTTCTACCAACCACCTCGGAACACTTACACGT TGCTAAACGATGTTGTAGACTCGGAACTGTCCAAATCCCGGTCGCTCGAC CTGCCTCTGCCCCCCTCACGTGTGTGGATCCGCGGATCTGTCCATGGGAC CACCCCTCATCCTTTCTCACCCGTCCACCCATGTACCTGTCAAAGCTGCC CTTCCTTGCGTCCGTCCCTCTGTAACGGTCGTGTCTGCAGATTTCTTCCG GTCTATCGGTCCGTCTTTGCGGAGCTGTGATGCTTCTCATCCGTCCACCT ATGTACCTGTCCGCCTGTTTCTCCCATCCATGGATTTATTAATGTGAAGA CAACAACAACAACAACAATATATACATATCCCCATCTGTCCAAACCATCA CCGGTCGACCCTTTCATCTACTGTATCCGTTTGTCGTCACGTCCTATTTT TGCCGTCGTTCGTGTCTGCATCAGGTGCACCGTGGTCGGCAGGAGCAAAT CCGCCTCAAGGCGCTCCGCGATGACGAGCAGGTTGCCACCGACTTGGAGC AGGCGAGGCTCGACAGGGAGAGTTTCCTGGCGGAGGAAGAGCGGGAGAGG GAGAAAGAAATGCGCAAACGCCAGGTAAATTTTATAGGTGGCGTACAGAA TAGACTACAACGTTTGTGCGAAAACGTGATGTCCTGGTACGTACTAGTTG AGACGAAGGTGTGTGAGATGTCTTTTGCTCGAGTTGGTTTGAGAAGGCGA TGCGTGGGGCGTGGCGCCTGGACGGGAAGATAGACAGAGGAGGCGTGCGT GCGACACATACACATGTTTTCTTCTGTATGCGGATCAAGAAACACGTGAA ATAAATTGCCATATTGATATATTAAGTGCAGCGTGTGTGTTACGGTGTCG GGACGGAAGCTCAGCAAGAACTTAAGCTACGCTGAACGAGTTCATTGCAT TGGGGGCGACGAATTATCACCCCCCTCTTCGTCTGCCTTGTGTGCTTGAG TTGCGTCACCCTGGGCACCATAGTAGACGCCCGCCATTGCAATATATTGG TTGACTGCAGTAAACGTTACTCTCACCACTCCCCTTTTCTTATATGAAGC ACCACTTTGTCACACGTCCCCTACTCTCGTTTCGGGGCGCAGGAGCTGCT AGACAACACCGCCAAGCTCAGGGAGCAGATGGCGGGCGCCCGTGCCCGAG CGGAGAGGGAGCAGCAGGAAGAGTACCTTAGGGTGAAGCAGATGGAGGCG TACGAGAGACGGTGAGAGTTCTGGGATTTGTTTTACCTGGTGAATTGTCC CACCTTCCGTAATGGCTTGGGGTGTACCGCCTTTATGGGGTCTCGATCGT ACCGAGGCCCTTTTCCTTCTTAGTCCAACATCTCTTTGTGAGCGTCGACC GTCGTTCAAAACTGTGTAGTACCCAGCCTATTTCATGAGGTTTTTGCTCT TTACTGATCACTCCCGGTCACTGAAGATGGCTCTTCACATGTCTCTTCAC AAGCACCGCTGCAACCTTCCTCCTCTGCCGACTTCTAACACCGCGCGGTC CTCGATCCGAGTGCGACTTAAGAAGTAGTGAGGACCAACCTAGCGGTGTG TAATAGTTTACGGCACAAAAATATATTTTTGGAACACCCACCATGCAGCT TGGTGTGCGCCCGCACGTGTAGGCCACAACCCCCCCCCCCTCCCTACCTG CTCGATCTATACACGAAAGTCTTGAACATCTTACGGCCAAACGAAGGAAG AGGAACGGCAGCTTAGAGCGCTTGCATCAAGGCCTCAGTGCGCGCAGTCT CGTTCTTGCAACGTCGGTGTATGCGGTGTGGGGGTATACACGCACGACCT GCGTTGACACGACGGGACATCCACAGATCCTACCCAGTGAATCCCACGCT GAACGCTCGCCATCGACACTCTTTTTGTAGTGTTGGTCCACATCAGTAAA ACTCCCTTTTCGTGCCCCCCCCCCCCCCCCCCCTCCCCGCCGCCCGGTCC CGTGCCCCTTGCGCATATAAATGTCTGCAGGCACAGGGAGCGCCTGGAGA AGCAGGCGGGTGTGGTCATCACGCACCACCCCCTGAAGCACACGCAGTGG TATACGTGA
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig143:1889..6997+

>mRNA_E-siliculosus-1a_F_contig143.2528.1 ID=mRNA_E-siliculosus-1a_F_contig143.2528.1|Name=mRNA_E-siliculosus-1a_F_contig143.2528.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1842bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig143:1889..6997+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGCAAAGATCCGCGAGCGCATCGCCTACCTGGAGGCACAGGAGAAAGC
CGCCGAAGAAAAGAGGGAAAGGAGGAACCAGCTCATGCGCAGCGACCTCA
ACACGCAGATGGCAAAGATCCGCGAGCGCATCGCCTACCTGGAGGCACAG
GAGAAAGCCGCCGAAGAAAAGAGGGAAAGGAGGAACCAGCTCATGCGCAG
CGACCTCAACACGCAGGTGGCGTACAACGCCGACCGTCGTCGACAGCTGT
GGGAACAGACCGCTCGGGACGACCTAAAAGAGCTCAATGAGCTCAGGGCG
ATCGTCAGGGCCGAGCAAGAGAAGGCGGAGGCGAAAAAGAAGGAGGCCCA
CGCGCGCGGGGCAGAGGTGGCGTACAACGCCGACCGTCGTCGACAGCTGT
GGGAACAGACCGCTCGGGACGACCTAAAAGAGCTCAATGAGCTCAGGGCG
ATCGTCAGGGCCGAGCAAGAGAAGGCGGAGGCGAAAAAGAAGGAGGCCCA
CGCGCGCGGGGCAGAGGTGCGAGACTTCAACGAGGCCAGGCGCGAGATGC
GTGTGGTGGCGGCGGAGCAGGCTCGCGAGCAGGACCTGGTGCTGCTGGAG
TACGCCATCGAGAAGGACAAGGCCGGGGAGGCGGAGGAGAAGGCGAAGAA
GGAGGAGGAGCAGAGGGTGCGAGACTTCAACGAGGCCAGGCGCGAGATGC
GTGTGGTGGCGGCGGAGCAGGCTCGCGAGCAGGACCTGGTGCTGCTGGAG
TACGCCATCGAGAAGGACAAGGCCGGGGAGGCGGAGGAGAAGGCGAAGAA
GGAGGAGGAGCAGAGGGTGCTGCGCCAGTACAACGAGTATCTCAAGGAGC
AGATGGCCAAGGAGGCCGCGGACGAGGCTCAGTACGACGAGATCAGACAG
GAGGCGGAGACTCGCATCTGGGACCAGAGGGACGCGCAGCTCAAGGCGCA
GAACGACGCTAGGGAGGCCCTCATGAAGCAGGTGCTGCGCCAGTACAACG
AGTATCTCAAGGAGCAGATGGCCAAGGAGGCCGCGGACGAGGCTCAGTAC
GACGAGATCAGACAGGAGGCGGAGACTCGCATCTGGGACCAGAGGGACGC
GCAGCTCAAGGCGCAGAACGACGCTAGGGAGGCCCTCATGAAGCAGGTGC
ACCGTGGTCGGCAGGAGCAAATCCGCCTCAAGGCGCTCCGCGATGACGAG
CAGGTTGCCACCGACTTGGAGCAGGCGAGGCTCGACAGGGAGAGTTTCCT
GGCGGAGGAAGAGCGGGAGAGGGAGAAAGAAATGCGCAAACGCCAGGTGC
ACCGTGGTCGGCAGGAGCAAATCCGCCTCAAGGCGCTCCGCGATGACGAG
CAGGTTGCCACCGACTTGGAGCAGGCGAGGCTCGACAGGGAGAGTTTCCT
GGCGGAGGAAGAGCGGGAGAGGGAGAAAGAAATGCGCAAACGCCAGGAGC
TGCTAGACAACACCGCCAAGCTCAGGGAGCAGATGGCGGGCGCCCGTGCC
CGAGCGGAGAGGGAGCAGCAGGAAGAGTACCTTAGGGTGAAGCAGATGGA
GGCGTACGAGAGACGGAGCTGCTAGACAACACCGCCAAGCTCAGGGAGCA
GATGGCGGGCGCCCGTGCCCGAGCGGAGAGGGAGCAGCAGGAAGAGTACC
TTAGGGTGAAGCAGATGGAGGCGTACGAGAGACGGCACAGGGAGCGCCTG
GAGAAGCAGGCGGGTGTGGTCATCACGCACCACCCCCTGAAGCACACGCA
GTGGTATACGTGAGCACAGGGAGCGCCTGGAGAAGCAGGCGGGTGTGGTC
ATCACGCACCACCCCCTGAAGCACACGCAGTGGTATACGTGA
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