mRNA_E-siliculosus-1a_F_contig143.2528.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig143.2528.1 vs. uniprot
Match: D8LQ98_ECTSI (Cilia- and flagella-associated protein 53 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ98_ECTSI) HSP 1 Score: 533 bits (1374), Expect = 2.680e-187 Identity = 309/315 (98.10%), Postives = 311/315 (98.73%), Query Frame = 1
Query: 1 ENARQEELHMAKIRERIAYLEAQEKAAEEKRERRNQLMRSDLNTQVAYNADRRRQLWEQTARDDLKELNELRAIVRAEQEKAEAKKKEAHARGAEVRDFNEARREMRVVAAEQAREQDLVLLEYAIEKDKAGEAEEKAKKEEEQRVLRQYNEYLKEQMAKEAADEAQYDEIRQEAETRIWDQRDAQLKAQNDAREALMKQVHRGRQEQIRLKALRDDEQVATDLEQARLDRESFLAEEERXXXXXXRKRQELLDNTAKLREQMAGARARAEREQQEEYLRVKQMEAYERRHRERLEKQAGVVITHHPLKHTQWYT 945
ENARQEE HMAKIRERIAYLEAQEKAAEEKRERRNQLMRSDLNTQVAYNADRRRQLWEQTARDDLKELNELRAIVRAEQEKAEAKKKEAHARGAEVRDFNEARREMRVVAAEQAREQDLVLL+YAIEKDKAGEAEEKAKKEEEQRVLRQYNEYLKEQMAKEAADEAQYDEIRQEAETRIWDQRDAQLKAQNDAREALMKQVHRGRQEQIRLKALRDDEQ+ATDLEQARLDRESFLAEEER XXXX RKRQELLDNTAKLR QMAGARARAEREQQEEYLRVKQMEAYERRHRERLEKQAGVVITHHPLKHTQWYT
Sbjct: 174 ENARQEEFHMAKIRERIAYLEAQEKAAEEKRERRNQLMRSDLNTQVAYNADRRRQLWEQTARDDLKELNELRAIVRAEQEKAEAKKKEAHARGAEVRDFNEARREMRVVAAEQAREQDLVLLDYAIEKDKAGEAEEKAKKEEEQRVLRQYNEYLKEQMAKEAADEAQYDEIRQEAETRIWDQRDAQLKAQNDAREALMKQVHRGRQEQIRLKALRDDEQLATDLEQARLDRESFLAEEEREXXXXMRKRQELLDNTAKLRGQMAGARARAEREQQEEYLRVKQMEAYERRHRERLEKQAGVVITHHPLKHTQWYT 488
BLAST of mRNA_E-siliculosus-1a_F_contig143.2528.1 vs. uniprot
Match: A0A835YTH0_9STRA (Cilia- and flagella-associated protein 53 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTH0_9STRA) HSP 1 Score: 199 bits (507), Expect = 1.160e-56 Identity = 137/313 (43.77%), Postives = 192/313 (61.34%), Query Frame = 1
Query: 7 ARQEELHMAKIRERIAYLEAQEKAAEEKRERRNQLMRSDLNTQVAYNADRRRQLWEQTARDDLKELNELRAIVRAEQEKAEAKKKEAHARGAEVRDFNEARREMRVVAAEQAREQDLVLLEYAIEKDKAGEAEEKAKKEEEQRVLRQYNEYLKEQMAKEAADEAQYDEIRQEAETRIWDQRDAQLKAQNDAREALMKQVHRGRQEQIRLKALRDDEQVATDLEQARLDRESFLAEEERXXXXXXRKRQELLDNTAKLREQMAGARARAEREQQEEYLRVKQMEAYERRHRERLEKQAGVVITHHPLKHTQWYT 945
A ++ + A+I ER+A+LEAQE+ EE R R ++++ L QV YNA RR L +++A +D EL+ELRAIV AE++ +R AA +++D+ LL+YA+++++AGEAEE K++ E+ +RQY YLK QM +EA D + D + +AET++W+ R+A+ + DAR ALM QVH RQEQIR + L D + A EQA DRE+F E + +R LLD AKLR Q+ A RE+QEEYL +K+MEA ER H+ RLE Q+G V+ HHPLKHTQWYT
Sbjct: 177 AEEDAQYTAQIYERMAWLEAQEREREETRRRTAEVVKDGLTAQVRYNAARRMALEQRSAEEDRLELDELRAIVAAEEQXXXXXXXXXXXXXXXXXXXXXXXXXLREEAAALEQQRDMALLKYAVDRERAGEAEEHRKRDAEREAMRQYTAYLKAQMEREAEDAGKLDTAQADAETKMWEAREAEQAKRADARRALMAQVHAARQEQIRARRLADAAERAALNEQAAFDREAFARAEAQEADKERERRAALLDQAAKLRGQVDERAAARARERQEEYLSMKRMEACEREHKARLEAQSGKVVLHHPLKHTQWYT 489
BLAST of mRNA_E-siliculosus-1a_F_contig143.2528.1 vs. uniprot
Match: A0A7S3YAB2_HETAK (Cilia- and flagella-associated protein 53 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YAB2_HETAK) HSP 1 Score: 180 bits (456), Expect = 3.180e-49 Identity = 132/310 (42.58%), Postives = 185/310 (59.68%), Query Frame = 1
Query: 16 EELHMAKIRERIAYLEAQEKAAEEKRERRNQLMRSDLNTQVAYNADRRRQLWEQTARDDLKELNELRAIVRAEQEKAEAKKKEAHARGAEVRDFNEARREMRVVAAEQAREQDLVLLEYAIEKDKAGEAEEKAKKEEEQRVLRQYNEYLKEQMAKEAADEAQYDEIRQEAETRIWDQRDAQLKAQNDAREALMKQVHRGRQEQIRLKALRDDEQVATDLEQARLDRESFLAEEERXXXXXXRKRQELLDNTAKLREQMAGARARAEREQQEEYLRVKQMEAYERRHRERLEKQAGVVITHHPLKHTQWYT 945
+E +MA + +A LE +E+ +E + N M +DL+ QVA NA+RR L AR D +E+ A GA VR+FN+A+ R A E R +DL+LLE+A + G+AEE+ K+ EE+RV+R+Y+ YL+EQM KEA DE+ + R E RIWDQR+A L+AQ DAR LM QV GR+EQ+ LK L +E+ D E+A + F E+ +RQ+L DN +L+ Q+ G + E+QE+YL KQME ER+H++RL++QAGVV T+ PLKHTQWYT
Sbjct: 176 DEQYMAGVMGHVAALELKERGVQEALRQANAKMVADLDDQVAKNAERRSALAAARARGDQEEIXXXXXXXXXXXXXXXXXXXXLVAAGAAVREFNQAKAAERGRAKELERGRDLLLLEHAQRMEARGQAEEERKRAEEKRVMREYHAYLQEQMVKEAEDESAIEAHRLREENRIWDQREADLRAQADARARLMGQVKAGREEQVYLKGLAAEEERKRDQEEAMRAKIEFELMEQEAAAKQAGRRQQLADNAQRLKAQIDGNAHQRRLEEQEKYLSAKQMEMMERKHQQRLKEQAGVVETYKPLKHTQWYT 485
BLAST of mRNA_E-siliculosus-1a_F_contig143.2528.1 vs. uniprot
Match: A0A7S1XRQ7_9STRA (Cilia- and flagella-associated protein 53 n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XRQ7_9STRA) HSP 1 Score: 148 bits (374), Expect = 2.210e-37 Identity = 119/304 (39.14%), Postives = 175/304 (57.57%), Query Frame = 1
Query: 46 RIAYLEAQEKAAEEKRERRNQLMRSDLNTQVAYNADRRRQLWEQTARDDLKELNELRAIVRAEQEKAEAKKKEAHARGAEVRDFNEARREMRVVAAEQAREQDLVLLEYAIEKDKAGEAEEKAKKEEEQRVLRQYNEYLKEQMAKEAADEAQYDEIRQEAETRIWDQRDAQLKAQNDAREALMKQVHRGRQEQIRLKALRDDEQVATDLEQARLDRESFLAEEERXXXXXXRKRQELLDNTAKLREQMA-GARARA---EREQQEEYLRVKQMEAYERRHRERLEKQAGVVITHHPLKHTQWYT 945
R+ LE +E A R N+ R DL+ QV +RR QL E +D +EL EL A ++ ++++ + +EAHARG EVR FNEAR MR A R+QDL+LL+Y +E+++ AEE+AK++ E R+Y E+LKE M KEA D+++ D IR+ E R+W++RDA+L+AQ +AR LM+ VH GRQEQI+ K RD + EQ R D + +++++ DN L +Q+A +AR ERE+QE M A + +R +AG V ++P H+ WYT
Sbjct: 185 RMKVLEDREIADAHARHEANEACRRDLDEQVRIKGERRLQLIESMRKDAEEELTELAAAIQRDEDEQRRRTEEAHARGREVRAFNEARLNMRQERAALERQQDLLLLQYGMEQERKRIAEEQAKRQLEINATREYTEHLKELMIKEAQDDSEVDAIREREENRVWEKRDAELRAQTEARRRLMEIVHAGRQEQIKAKRERDAIDRILEEEQERNDAAELQKGLQMDREAAEKRKRDAQDNNTLLLKQIAMREQARLDELERERQEAEKWRADMRAVD----QRAAAEAGEVKLYYPRSHSNWYT 484
BLAST of mRNA_E-siliculosus-1a_F_contig143.2528.1 vs. uniprot
Match: A0A7S2STN1_9STRA (Cilia- and flagella-associated protein 53 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STN1_9STRA) HSP 1 Score: 134 bits (338), Expect = 4.590e-34 Identity = 99/257 (38.52%), Postives = 155/257 (60.31%), Query Frame = 1
Query: 199 ELNELRAIVRAEQEKAEAKKKEAHARGAEVRDFNEARREMRVVAAEQAREQDLVLLEYAIEKDKAGEAEEKAKKEEEQRVLRQYNEYLKEQMAKEAADEAQYDEIRQEAETRIWDQRDAQLKAQNDAREALMKQVHRGRQEQIRLKALRDDEQVATD--------LEQARLDRESFLAEEERXXXXXXRKRQELLDNTAKLREQMAGARARAEREQQEEYLRVKQMEAYERRHRERLEKQAGVVITHHPLKHTQWYT 945
EL ELRA + ++++A+ A RG + R FNE+R +R AA++ R++DLVLL+YA++K++A E KK EEQ ++Y EYL+ QM KEA D A D +R+ E R W +R+A+ K ++DAR LM+ + GRQ QIR + R+ +++ D +QA LDR AE+E +++Q + +N + +R Q+ R + +E+Q++YL K M+ E H+++L +QAG + H P KHT WYT
Sbjct: 15 ELTELRAAIARDEQEAQRHLLSAKQRGKQTRHFNESRLHIRQEAADRERQEDLVLLKYAMDKERAEIDAELRKKREEQETTKRYQEYLRAQMIKEAQDTALADSLRKADEDRNWAKREAEQKRRDDARANLMQVTNDGRQRQIRERLERETKELEEDRGDGQRFAADQAELDR--IEAEKE------AKRKQNVAENLSGIRSQIEIRRQQQMKEEQDKYLEAKIMQKVEAEHKKKLSEQAGTLRLHRPKKHTAWYT 263
BLAST of mRNA_E-siliculosus-1a_F_contig143.2528.1 vs. uniprot
Match: A0A4D9D339_9STRA (Cilia- and flagella-associated protein 53 n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D339_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 3.080e-20 Identity = 82/251 (32.67%), Postives = 131/251 (52.19%), Query Frame = 1
Query: 187 DDLKELNELRAIVRAEQEKAEAKKKEAHARGAEVRDFNEARREMRVVAAEQAREQDLVLLEYAIEKDKAGEAEEKAKKEEEQRVLRQYNEYLKEQMAKEAADEAQYDEIRQEAETRIWDQRDAQLKAQNDAREALMKQVHRGRQEQIRLKALRDDEQVATDLEQARLDRESFLAEEERXXXXXXRKRQELLDNTAKLREQMAGARARAEREQQEEYLRVKQMEAYERRHRERLEKQAGVVITHHPLKHTQW 939
+D +E+ +++ + E+E AE +KK G ++R FNE R + AE+ R+QD+ LL YA+E++ A EK + + + R Y +YL+E M KE DE + + IR E +W+QR+A L+ + ++AL ++ RQ+Q+ KAL E+ + AEEE R +L N L +Q R R E+Q+EYLR K ++ E + R ++QAGV H PL+ +W
Sbjct: 80 EDAREIAQIQIELTREKELAEKRKKADWLEGQKIRAFNEQRLGLMRARAEEERQQDMTLLNYALEEEAKSVAAEKDRGVKAREESRLYRKYLEELMQKEVEDEREIESIRLAKEEEVWEQREAVLQEREAKKKALWLEIDATRQQQLLYKALTAAEESEAESTLVGRWEAEQKAEEEECQRSKEAHRLAILSNREVLEKQTKALRHRVALEEQQEYLRTKHVQKEEADQQRRRQEQAGVARIHFPLRSQKW 330
BLAST of mRNA_E-siliculosus-1a_F_contig143.2528.1 vs. uniprot
Match: A0A7S0GFB1_9STRA (Cilia- and flagella-associated protein 53 n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GFB1_9STRA) HSP 1 Score: 100 bits (248), Expect = 5.610e-20 Identity = 82/222 (36.94%), Postives = 126/222 (56.76%), Query Frame = 1
Query: 304 ARREMRVVAAEQAREQDLVLLEYAIEKDKAGEAEEKAKKEEEQRVLRQYNEYLKEQMAKEAADEAQYDEIRQEAETRIWDQRDAQLKAQNDAREALMKQVHRGRQEQIRLKALRDDEQVATDLEQARLDRESFLAEEERXXXXXXRKRQELLDNTAKLREQMAGARARAEREQQEE--------YLRVKQMEAYERRHRERLEKQAGVVITHHPLKHTQWYT 945
AR + R+ + RE DLVLL+YA++K+ K+KKE E+++ R+Y +LK+QM KE + + D+IR +IW +RD L+AQ DAR L+K+V +GRQEQ+R+K L ++E+ EQAR + EEE +R E N K E+M + A+ +Q+E +LR K EA E + + RL++ + ++PLK+T WYT
Sbjct: 239 ARYQQRIEVKARERENDLVLLKYALKKESDSTDCNKSKKENEKKLSREYEAFLKDQMQKEKDENLKVDDIRATEMEKIWVKRDEALQAQADARGNLLKEVQKGRQEQMRIKILVEEEEKEASAEQARFVAQKLKVEEEN-------ERDENSRNKVKTVERMRANKYLADHNKQQEQAKESEKYHLRKKMQEA-ETKRQMRLDQLKCNPVAYYPLKNTNWYT 452
BLAST of mRNA_E-siliculosus-1a_F_contig143.2528.1 vs. uniprot
Match: A0A6G0XRX0_9STRA (Cilia- and flagella-associated protein 53 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XRX0_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 1.820e-16 Identity = 83/231 (35.93%), Postives = 132/231 (57.14%), Query Frame = 1
Query: 256 KKEAHARGAEVRDFNEARREMRVVAAEQAREQDLVLLEYAIEKDKAGEAEEKAKKEEEQRVLRQYNEYLKEQMAKEAADEAQYDEIRQEAETRIWDQRDAQLKAQNDAREALMKQVHRGRQEQIRLKALRDDEQVATDLE-QARLDRESFLAEEERXXXXXXRKRQELLDNTAKLREQMAGARARAEREQQEEYLRVKQMEAYERRHRERLEKQAGVV-ITHHPLKHTQWY 942
K++A AR +V+ FN+ R EM A + RE D LL+ A++K+ EA E+ +E+ +R +Y L++QMA EA D + D IR++ E +W +RDA+ +A+ DARE L+ QV + RQEQI K + A D AR+ RES A ++ RK +E + A L Q A A+ AE+++Q E+L +K+M E++H+ +L A + ++ K ++WY
Sbjct: 241 KRKAIARATDVKKFNQKRAEMAEREARREREYDTQLLKLALQKEADTEARERQLQEKFKRDQLEYQAMLRQQMATEAEDLSYLDAIRKKMEDEVWAKRDAEHRAEQDAREELLAQVVQSRQEQIVRKGQIKQQDAANDAAYMARMQRESDEALQKELLEQEKRK-EEAKRHQADLMAQKAAAKLAAEKQKQAEFLDMKRMTLTEKQHQAKLAALAKQPPVFNYRRKTSEWY 470
BLAST of mRNA_E-siliculosus-1a_F_contig143.2528.1 vs. uniprot
Match: A0A482SE17_9ARCH (Cilia- and flagella-associated protein 53 n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SE17_9ARCH) HSP 1 Score: 82.8 bits (203), Expect = 4.850e-15 Identity = 78/221 (35.29%), Postives = 109/221 (49.32%), Query Frame = 1
Query: 295 FNEARREMRVVAAEQAREQDLVLLEYAIEKDKAGEAEEKAKKEEEQRVLRQYNEYLKEQMAKEAADEAQYDEIRQEAETRIWDQRDAQLKAQNDAREALMKQVHRGRQEQIRLKALRDDEQVATDLEQARLDRESFLAEEERXXXXXXRKRQELLDNTAKLREQMAGARARAEREQQEEYLRV----KQMEAYERRHRERLEKQAGVVITHHPLKHTQWYT 945
FN R+ R + REQD VLL+YA+ K+ A E+AK+ +++ +Y +YL+EQM KEA D A DEIR+ E ++W RD L+A++DAR LMK V GRQEQIR K DE+ + E ++ FL E + + + KQM+ ER H++RL +QAG V PL+ QWYT
Sbjct: 3 FNAENRKYREEESLVEREQDGVLLDYALRKEAEQIAAEEAKRSGQRQAALRYRKYLEEQMVKEAEDTAFVDEIRKREEEKVWKARDDALRARDDARNYLMKMVDEGRQEQIRYK----DERERAEKEHDKIFARKFLDEADEAVRKERAEAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKQMKHMERMHQQRLAEQAGSVRLAFPLQKNQWYT 219
BLAST of mRNA_E-siliculosus-1a_F_contig143.2528.1 vs. uniprot
Match: W4FWZ1_9STRA (Cilia- and flagella-associated protein 53 n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FWZ1_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 6.680e-13 Identity = 76/231 (32.90%), Postives = 131/231 (56.71%), Query Frame = 1
Query: 256 KKEAHARGAEVRDFNEARREMRVVAAEQAREQDLVLLEYAIEKDKAGEAEEKAKKEEEQRVLRQYNEYLKEQMAKEAADEAQYDEIRQEAETRIWDQRDAQLKAQNDAREALMKQVHRGRQEQIRLKALRDDEQVATDLE-QARLDRESFLAEEERXXXXXXRKRQELLDNTAKLREQMAGARARAEREQQEEYLRVKQMEAYERRHRERLEKQAGVVIT-HHPLKHTQWY 942
K++A AR +V+ FN+ R ++ A + E D LL+ A+ ++ +A E+A +E+ +R +Y L++QMA EA D + D IR++ E +W +RDA+ +A++DAR+ L+ QV + RQ+Q+ K LR A D AR+ RES A ++ RK + N + Q A +A E+++Q E+L +K+M E++H+ +L + A T ++ K ++WY
Sbjct: 294 KRKAVARAMDVKKFNQTRSDLTERQARREHEYDTQLLQLALRQEAETDARERALQEKFKRDQLEYQAMLRKQMATEAEDLSYLDAIRKKMEDEVWAKRDAEHRAEDDARQELLAQVLQSRQDQMERKELRKAADAAADAAYMARMQRESDEALQKELTDQDKRK-WDAKRNQVDVVAQKAQTKALMEKQKQAEFLDMKRMALSEKQHKLKLAQLATQQPTLNYRRKTSEWY 523 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig143.2528.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig143.2528.1 >prot_E-siliculosus-1a_F_contig143.2528.1 ID=prot_E-siliculosus-1a_F_contig143.2528.1|Name=mRNA_E-siliculosus-1a_F_contig143.2528.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=307bp MAKIRERIAYLEAQEKAAEEKRERRNQLMRSDLNTQVAYNADRRRQLWEQback to top mRNA from alignment at E-siliculosus-1a_F_contig143:1889..6997+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig143.2528.1 ID=mRNA_E-siliculosus-1a_F_contig143.2528.1|Name=mRNA_E-siliculosus-1a_F_contig143.2528.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=5109bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig143:1889..6997+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig143:1889..6997+ >mRNA_E-siliculosus-1a_F_contig143.2528.1 ID=mRNA_E-siliculosus-1a_F_contig143.2528.1|Name=mRNA_E-siliculosus-1a_F_contig143.2528.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1842bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig143:1889..6997+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |