mRNA_E-siliculosus-1a_F_contig143.2527.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig143.2527.1 vs. uniprot
Match: D8LQ98_ECTSI (Cilia- and flagella-associated protein 53 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ98_ECTSI) HSP 1 Score: 146 bits (368), Expect = 6.200e-40 Identity = 76/81 (93.83%), Postives = 79/81 (97.53%), Query Frame = 1
Query: 1 QILNSAETMEERKTRILEKATKLKNVREAARRNYVQECYDRQWRDACDDARTLDSKANTEWVTAQRWEQVAEKAAREEASA 243
+ILNSAETMEERKTRIL+KATKLKN REAARRNYVQECYDRQWRDACDDARTLDSKANTEWVTAQRWEQVAEKAAREE +A
Sbjct: 96 EILNSAETMEERKTRILDKATKLKNAREAARRNYVQECYDRQWRDACDDARTLDSKANTEWVTAQRWEQVAEKAAREEENA 176
BLAST of mRNA_E-siliculosus-1a_F_contig143.2527.1 vs. uniprot
Match: A0A835YTH0_9STRA (Cilia- and flagella-associated protein 53 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTH0_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 3.200e-20 Identity = 47/76 (61.84%), Postives = 62/76 (81.58%), Query Frame = 1
Query: 1 QILNSAETMEERKTRILEKATKLKNVREAARRNYVQECYDRQWRDACDDARTLDSKANTEWVTAQRWEQVAEKAAR 228
++LN ET+E+RK RI EKATKL++ REAAR+ +VQ+ YD+QWRD+CD +RTLDSKA +WV AQR +Q+ EKA R
Sbjct: 97 EVLNRTETLEQRKERIREKATKLRDAREAARKQFVQDMYDKQWRDSCDASRTLDSKAFLDWVNAQREQQLEEKALR 172
BLAST of mRNA_E-siliculosus-1a_F_contig143.2527.1 vs. uniprot
Match: A0A812P941_SYMMI (Cilia- and flagella-associated protein 53 n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812P941_SYMMI) HSP 1 Score: 70.5 bits (171), Expect = 2.600e-12 Identity = 38/73 (52.05%), Postives = 54/73 (73.97%), Query Frame = 1
Query: 1 QILNSAETMEERKTRILEKATKLKNVREAARRNYVQECYDRQWRDACDDARTLDSKANTEWVTAQRWEQVAEK 219
++L + ET E+RK RI+E+A L++ RE AR+++V+ DRQWRDACDDARTLDS+A V+ +R Q+ EK
Sbjct: 91 EVLANVETQEDRKARIMERAYALRDERERARQDHVKSSLDRQWRDACDDARTLDSEALLSLVSRERKAQIDEK 163
BLAST of mRNA_E-siliculosus-1a_F_contig143.2527.1 vs. uniprot
Match: A0A7S3YAB2_HETAK (Cilia- and flagella-associated protein 53 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YAB2_HETAK) HSP 1 Score: 68.6 bits (166), Expect = 1.240e-11 Identity = 36/76 (47.37%), Postives = 54/76 (71.05%), Query Frame = 1
Query: 1 QILNSAETMEERKTRILEKATKLKNVREAARRNYVQECYDRQWRDACDDARTLDSKANTEWVTAQRWEQVAEKAAR 228
++L + E+ E+RK R+ E+A L+ RE R+ +VQ+ YDR+WRDACDDAR LDS+A ++V +R Q++EK R
Sbjct: 93 EVLENVESPEDRKRRMRERALALQAAREEKRQAFVQDAYDRRWRDACDDARALDSQALLDFVAQERLSQLSEKGRR 168
BLAST of mRNA_E-siliculosus-1a_F_contig143.2527.1 vs. uniprot
Match: A0A7S1XRQ7_9STRA (Cilia- and flagella-associated protein 53 n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XRQ7_9STRA) HSP 1 Score: 61.2 bits (147), Expect = 4.670e-9 Identity = 34/63 (53.97%), Postives = 45/63 (71.43%), Query Frame = 1
Query: 10 NSAETMEERKTRILEKATKLKNVREAARRNYVQECYDRQWRDACDDARTLDSKANTEWVTAQR 198
+ ET E+RK R+ KA LKN REAA+ ++V+ +QWRD+CD+ARTLDSKA +VTA R
Sbjct: 95 SETETAEQRKERLRSKAMALKNRREAAQASFVEAKRQQQWRDSCDEARTLDSKALLHYVTAAR 157
BLAST of mRNA_E-siliculosus-1a_F_contig143.2527.1 vs. uniprot
Match: A0A1V9YL46_9STRA (Cilia- and flagella-associated protein 53 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YL46_9STRA) HSP 1 Score: 57.4 bits (137), Expect = 1.060e-7 Identity = 37/80 (46.25%), Postives = 53/80 (66.25%), Query Frame = 1
Query: 7 LNSAETMEERKTRILEKATKLKNVREAARRNYVQECYDRQWRDACDDARTLDSKANTEWVTAQRWEQVAEKAAREEASAA 246
L + ET E+RK +++ +AT+LK REAAR+ YV+E + +R CDD RT+DS A V A+R Q+A AAR++ AA
Sbjct: 97 LANVETPEQRKAKMIARATELKAKREAARQAYVEEKRSQLYRQGCDDIRTIDSAAVMAQVVAERETQLAAAAARQKDEAA 176
BLAST of mRNA_E-siliculosus-1a_F_contig143.2527.1 vs. uniprot
Match: A0A482S941_9ARCH (Cilia- and flagella-associated protein 53 n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S941_9ARCH) HSP 1 Score: 55.5 bits (132), Expect = 1.350e-7 Identity = 30/57 (52.63%), Postives = 40/57 (70.18%), Query Frame = 1
Query: 49 LEKATKLKNVREAARRNYVQECYDRQWRDACDDARTLDSKANTEWVTAQRWEQVAEK 219
+E+A L++ RE AR+ YVQ+ QWRDACDDARTLDSKA ++ +R Q+ EK
Sbjct: 1 MERAYALRDAREKARQVYVQKRLQDQWRDACDDARTLDSKAALLYMNQERLRQIQEK 57
BLAST of mRNA_E-siliculosus-1a_F_contig143.2527.1 vs. uniprot
Match: A0A7S0GFB1_9STRA (Cilia- and flagella-associated protein 53 n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GFB1_9STRA) HSP 1 Score: 57.0 bits (136), Expect = 1.440e-7 Identity = 28/48 (58.33%), Postives = 35/48 (72.92%), Query Frame = 1
Query: 22 TMEERKTRILEKATKLKNVREAARRNYVQECYDRQWRDACDDARTLDS 165
T EER +I EKA +LK RE R+N+V ECYD+QWRD CD+ R +DS
Sbjct: 68 TPEERMIQIREKAVRLKEAREENRQNFVNECYDKQWRDDCDEIRAMDS 115
BLAST of mRNA_E-siliculosus-1a_F_contig143.2527.1 vs. uniprot
Match: A0A067CRW0_SAPPC (Cilia- and flagella-associated protein 53 n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CRW0_SAPPC) HSP 1 Score: 55.1 bits (131), Expect = 6.920e-7 Identity = 37/80 (46.25%), Postives = 52/80 (65.00%), Query Frame = 1
Query: 7 LNSAETMEERKTRILEKATKLKNVREAARRNYVQECYDRQWRDACDDARTLDSKANTEWVTAQRWEQVAEKAAREEASAA 246
L + ET EERK +++ +AT+LK REAAR YV+E +Q+R+ CDD RT+DS V A+R Q+A A R++ AA
Sbjct: 95 LANVETPEERKAKMIARATELKAKREAARVAYVEEKRLQQYREGCDDIRTVDSATVMAEVVAERERQLAALAERQKEEAA 174
BLAST of mRNA_E-siliculosus-1a_F_contig143.2527.1 vs. uniprot
Match: A0A7S3JZD5_9STRA (Cilia- and flagella-associated protein 53 n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JZD5_9STRA) HSP 1 Score: 54.7 bits (130), Expect = 9.440e-7 Identity = 36/71 (50.70%), Postives = 48/71 (67.61%), Query Frame = 1
Query: 10 NSAETMEERKTRILEKATKLKNVREAARRNYVQECYDRQWRDACDDARTLDSKANTEWVTAQRWEQVAEKA 222
NSAE+ RK ++ KA L+ REA R+N V++CY RQ+R ACD+ART DSKA E + A+R Q+ KA
Sbjct: 88 NSAES---RKEYLMNKARALQEEREAYRKNNVEDCYRRQFRLACDEARTRDSKALQELINAEREIQMQIKA 155 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig143.2527.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig143.2527.1 >prot_E-siliculosus-1a_F_contig143.2527.1 ID=prot_E-siliculosus-1a_F_contig143.2527.1|Name=mRNA_E-siliculosus-1a_F_contig143.2527.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=76bp MEERKTRILEKATKLKNVREAARRNYVQECYDRQWRDACDDARTLDSKANback to top mRNA from alignment at E-siliculosus-1a_F_contig143:670..1301+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig143.2527.1 ID=mRNA_E-siliculosus-1a_F_contig143.2527.1|Name=mRNA_E-siliculosus-1a_F_contig143.2527.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=632bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig143:670..1301+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig143:670..1301+ >mRNA_E-siliculosus-1a_F_contig143.2527.1 ID=mRNA_E-siliculosus-1a_F_contig143.2527.1|Name=mRNA_E-siliculosus-1a_F_contig143.2527.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=456bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig143:670..1301+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |