mRNA_E-siliculosus-1a_F_contig14287.2523.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig14287.2523.1 vs. uniprot
Match: D8LFI6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFI6_ECTSI) HSP 1 Score: 219 bits (559), Expect = 5.950e-64 Identity = 111/114 (97.37%), Postives = 112/114 (98.25%), Query Frame = 1
Query: 1 DARTRCISLFFKSLTSRADQVVDAAQAALVQVIFTNRQFKDKSGMPKDLLQSRLRPVLKNLTHIQKLSLPLLQGLSRLLYLLSNWFNVTLGDKLFGYLRQWTEPQKLQALPEPK 342
DARTRCISLFFKSLTSRADQVVDAAQAALVQVIFTNRQFKDKSGMPKDLLQS LRPVLKNLTHIQKLSLPLLQGLSRLLYLLSNWFNVTLGDKLFGYLRQWTEPQKLQ LP+PK
Sbjct: 1702 DARTRCISLFFKSLTSRADQVVDAAQAALVQVIFTNRQFKDKSGMPKDLLQSCLRPVLKNLTHIQKLSLPLLQGLSRLLYLLSNWFNVTLGDKLFGYLRQWTEPQKLQTLPDPK 1815
BLAST of mRNA_E-siliculosus-1a_F_contig14287.2523.1 vs. uniprot
Match: A0A6H5KAF7_9PHAE (FAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAF7_9PHAE) HSP 1 Score: 218 bits (556), Expect = 1.510e-63 Identity = 110/114 (96.49%), Postives = 112/114 (98.25%), Query Frame = 1
Query: 1 DARTRCISLFFKSLTSRADQVVDAAQAALVQVIFTNRQFKDKSGMPKDLLQSRLRPVLKNLTHIQKLSLPLLQGLSRLLYLLSNWFNVTLGDKLFGYLRQWTEPQKLQALPEPK 342
DARTRCISLFFKSLTSRADQVVDAAQAALVQVIFTNRQFKDKSGMPKDLLQS LRPVLKNLTHIQKLSLPLLQGLSRLLYLLSNWFNVTLGDKLFGYLRQWTEP+KLQ LP+PK
Sbjct: 782 DARTRCISLFFKSLTSRADQVVDAAQAALVQVIFTNRQFKDKSGMPKDLLQSCLRPVLKNLTHIQKLSLPLLQGLSRLLYLLSNWFNVTLGDKLFGYLRQWTEPEKLQGLPDPK 895
BLAST of mRNA_E-siliculosus-1a_F_contig14287.2523.1 vs. uniprot
Match: A0A2G9GUL9_9LAMI (Histone acetyltransferase SAGA, TRRAP/TRA1 component, PI-3 kinase superfamily n=1 Tax=Handroanthus impetiginosus TaxID=429701 RepID=A0A2G9GUL9_9LAMI) HSP 1 Score: 120 bits (301), Expect = 3.460e-29 Identity = 67/122 (54.92%), Postives = 84/122 (68.85%), Query Frame = 1
Query: 1 DARTRCISLFFKSLTSRADQVVDAAQAALVQVIFTNRQFKDKSGMPKDLLQSRLRPVLKNLTHIQKLSLPLLQGLSRLLYLLSNWFNVTLGDKLFGYLRQWTEPQKL-------QALPEPKV 345
D R + IS+FFKSLTSR+ ++V A+ L QVI + R MPK+LLQS LRP+L NL H + LS+PLLQGL+RLL LLSNWFNVTLG KL +L++W EP KL +A EPK+
Sbjct: 1380 DLRAKIISMFFKSLTSRSPEIVAVAKEGLRQVIISQR-------MPKELLQSSLRPILVNLAHTKNLSMPLLQGLARLLELLSNWFNVTLGGKLLEHLKKWLEPDKLAQCQKSWKAGEEPKI 1494
BLAST of mRNA_E-siliculosus-1a_F_contig14287.2523.1 vs. uniprot
Match: A0A4D8ZWG2_SALSN (Uncharacterized protein n=1 Tax=Salvia splendens TaxID=180675 RepID=A0A4D8ZWG2_SALSN) HSP 1 Score: 120 bits (301), Expect = 3.460e-29 Identity = 67/122 (54.92%), Postives = 84/122 (68.85%), Query Frame = 1
Query: 1 DARTRCISLFFKSLTSRADQVVDAAQAALVQVIFTNRQFKDKSGMPKDLLQSRLRPVLKNLTHIQKLSLPLLQGLSRLLYLLSNWFNVTLGDKLFGYLRQWTEPQKL-------QALPEPKV 345
D R + IS+FFKSLTSR+ ++V A+ L QVI R MPK+LLQS LRP+L NL H + LS+PLLQGL+RLL LLSNWFNVTLG KL +L++W EP+KL +A EPK+
Sbjct: 1382 DLRAKVISMFFKSLTSRSPEIVAVAKEGLRQVILQQR-------MPKELLQSSLRPILVNLAHTKNLSMPLLQGLARLLELLSNWFNVTLGGKLLEHLKKWLEPEKLALTQKAWKAGEEPKI 1496
BLAST of mRNA_E-siliculosus-1a_F_contig14287.2523.1 vs. uniprot
Match: A0A6I9UXG1_SESIN (transcription-associated protein 1 isoform X4 n=1 Tax=Sesamum indicum TaxID=4182 RepID=A0A6I9UXG1_SESIN) HSP 1 Score: 120 bits (301), Expect = 3.460e-29 Identity = 67/122 (54.92%), Postives = 84/122 (68.85%), Query Frame = 1
Query: 1 DARTRCISLFFKSLTSRADQVVDAAQAALVQVIFTNRQFKDKSGMPKDLLQSRLRPVLKNLTHIQKLSLPLLQGLSRLLYLLSNWFNVTLGDKLFGYLRQWTEPQKL-------QALPEPKV 345
D R + IS+FFKSLTSR+ ++V A+ L QVI R MPK+LLQS LRP+L NL H + LS+PLLQGL+RLL LLSNWFNVTLG KL +L++W EP+KL +A EPK+
Sbjct: 1382 DLRAKIISMFFKSLTSRSPEIVAVAKEGLRQVILQQR-------MPKELLQSSLRPILVNLAHTKNLSMPLLQGLARLLELLSNWFNVTLGGKLLEHLKKWLEPEKLAQCQKSWKAGEEPKI 1496
BLAST of mRNA_E-siliculosus-1a_F_contig14287.2523.1 vs. uniprot
Match: A0A6I9UL48_SESIN (transcription-associated protein 1 isoform X3 n=1 Tax=Sesamum indicum TaxID=4182 RepID=A0A6I9UL48_SESIN) HSP 1 Score: 120 bits (301), Expect = 3.460e-29 Identity = 67/122 (54.92%), Postives = 84/122 (68.85%), Query Frame = 1
Query: 1 DARTRCISLFFKSLTSRADQVVDAAQAALVQVIFTNRQFKDKSGMPKDLLQSRLRPVLKNLTHIQKLSLPLLQGLSRLLYLLSNWFNVTLGDKLFGYLRQWTEPQKL-------QALPEPKV 345
D R + IS+FFKSLTSR+ ++V A+ L QVI R MPK+LLQS LRP+L NL H + LS+PLLQGL+RLL LLSNWFNVTLG KL +L++W EP+KL +A EPK+
Sbjct: 1383 DLRAKIISMFFKSLTSRSPEIVAVAKEGLRQVILQQR-------MPKELLQSSLRPILVNLAHTKNLSMPLLQGLARLLELLSNWFNVTLGGKLLEHLKKWLEPEKLAQCQKSWKAGEEPKI 1497
BLAST of mRNA_E-siliculosus-1a_F_contig14287.2523.1 vs. uniprot
Match: A0A6I9UND7_SESIN (transcription-associated protein 1 isoform X1 n=2 Tax=Sesamum indicum TaxID=4182 RepID=A0A6I9UND7_SESIN) HSP 1 Score: 120 bits (301), Expect = 3.460e-29 Identity = 67/122 (54.92%), Postives = 84/122 (68.85%), Query Frame = 1
Query: 1 DARTRCISLFFKSLTSRADQVVDAAQAALVQVIFTNRQFKDKSGMPKDLLQSRLRPVLKNLTHIQKLSLPLLQGLSRLLYLLSNWFNVTLGDKLFGYLRQWTEPQKL-------QALPEPKV 345
D R + IS+FFKSLTSR+ ++V A+ L QVI R MPK+LLQS LRP+L NL H + LS+PLLQGL+RLL LLSNWFNVTLG KL +L++W EP+KL +A EPK+
Sbjct: 1387 DLRAKIISMFFKSLTSRSPEIVAVAKEGLRQVILQQR-------MPKELLQSSLRPILVNLAHTKNLSMPLLQGLARLLELLSNWFNVTLGGKLLEHLKKWLEPEKLAQCQKSWKAGEEPKI 1501
BLAST of mRNA_E-siliculosus-1a_F_contig14287.2523.1 vs. uniprot
Match: A0A1J3DM77_NOCCA (Putative transcription-associated protein 1 (Fragment) n=3 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3DM77_NOCCA) HSP 1 Score: 116 bits (290), Expect = 4.460e-29 Identity = 65/122 (53.28%), Postives = 83/122 (68.03%), Query Frame = 1
Query: 1 DARTRCISLFFKSLTSRADQVVDAAQAALVQVIFTNRQFKDKSGMPKDLLQSRLRPVLKNLTHIQKLSLPLLQGLSRLLYLLSNWFNVTLGDKLFGYLRQWTEPQKL-------QALPEPKV 345
+ R + IS+FFKSLT RA ++V A+ L QVI R MPK+LLQS LRP+L NL H + L++PLLQGL+RLL LLSNWFNVTLG KL +L++W EP+KL +A EPK+
Sbjct: 177 ELRAKIISMFFKSLTCRAPEIVTVAKEGLRQVINQQR-------MPKELLQSSLRPILVNLAHTKNLNMPLLQGLARLLELLSNWFNVTLGGKLLEHLKKWLEPEKLAQSQKSWKAGEEPKI 291
BLAST of mRNA_E-siliculosus-1a_F_contig14287.2523.1 vs. uniprot
Match: W9T0T4_9ROSA (Uncharacterized protein n=1 Tax=Morus notabilis TaxID=981085 RepID=W9T0T4_9ROSA) HSP 1 Score: 120 bits (300), Expect = 4.550e-29 Identity = 67/122 (54.92%), Postives = 84/122 (68.85%), Query Frame = 1
Query: 1 DARTRCISLFFKSLTSRADQVVDAAQAALVQVIFTNRQFKDKSGMPKDLLQSRLRPVLKNLTHIQKLSLPLLQGLSRLLYLLSNWFNVTLGDKLFGYLRQWTEPQKL-------QALPEPKV 345
+ R++ IS+FFKSLT R ++V A+ L QVI R MPK+LLQS LRP+L NL H + LS+PLLQGL+RLL LLSNWFNVTLGDKL +LR+W EP+KL +A EPK+
Sbjct: 483 ELRSKIISMFFKSLTCRTSEIVAVAKEGLRQVINQQR-------MPKELLQSSLRPILVNLAHTKNLSMPLLQGLARLLELLSNWFNVTLGDKLLEHLRKWLEPEKLAQSQKSWKAGEEPKI 597
BLAST of mRNA_E-siliculosus-1a_F_contig14287.2523.1 vs. uniprot
Match: J3MNJ0_ORYBR (Uncharacterized protein n=2 Tax=Oryza brachyantha TaxID=4533 RepID=J3MNJ0_ORYBR) HSP 1 Score: 120 bits (300), Expect = 4.720e-29 Identity = 66/122 (54.10%), Postives = 84/122 (68.85%), Query Frame = 1
Query: 1 DARTRCISLFFKSLTSRADQVVDAAQAALVQVIFTNRQFKDKSGMPKDLLQSRLRPVLKNLTHIQKLSLPLLQGLSRLLYLLSNWFNVTLGDKLFGYLRQWTEPQKL-------QALPEPKV 345
D R++ IS+FFKSLT R ++V+ A+ L QV+ R MPKDLLQS LRP+L NL H + L++PLLQGL+RLL LLSNWFNVTLG KL +L+QW EP+KL +A EPK+
Sbjct: 1357 DLRSKIISMFFKSLTCRTTEIVNVAKEGLRQVVQQQR-------MPKDLLQSSLRPILVNLAHTRSLTMPLLQGLARLLELLSNWFNVTLGAKLLDHLKQWLEPEKLAQSQKSWKAGDEPKI 1471 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig14287.2523.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig14287.2523.1 >prot_E-siliculosus-1a_F_contig14287.2523.1 ID=prot_E-siliculosus-1a_F_contig14287.2523.1|Name=mRNA_E-siliculosus-1a_F_contig14287.2523.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=122bp DARTRCISLFFKSLTSRADQVVDAAQAALVQVIFTNRQFKDKSGMPKDLLback to top mRNA from alignment at E-siliculosus-1a_F_contig14287:258..1131- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig14287.2523.1 ID=mRNA_E-siliculosus-1a_F_contig14287.2523.1|Name=mRNA_E-siliculosus-1a_F_contig14287.2523.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=874bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig14287:258..1131- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig14287:258..1131- >mRNA_E-siliculosus-1a_F_contig14287.2523.1 ID=mRNA_E-siliculosus-1a_F_contig14287.2523.1|Name=mRNA_E-siliculosus-1a_F_contig14287.2523.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=732bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig14287:258..1131- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |