mRNA_E-siliculosus-1a_F_contig1426.2512.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1426.2512.1 vs. uniprot
Match: A0A8J5XPH7_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XPH7_DIALT) HSP 1 Score: 79.0 bits (193), Expect = 1.410e-17 Identity = 41/79 (51.90%), Postives = 55/79 (69.62%), Query Frame = 1
Query: 1 MHPLVRDLCKRFVLASRRHPSGEAWFKDKAREALQRNALLSSEEDIRRAVARGRRVVRDAEEFSKFSRYRAMRRRYSDP 237
MHPLVRDL KRF+L + +P G A + KA+EAL+ A L E +I+RAVARGR +VR+ + K +YR M++RYS P
Sbjct: 1 MHPLVRDLYKRFLLVGKDYPGGLALVRRKAKEALRNQAHLQDELEIKRAVARGRWMVRELQGIIKLKKYREMKKRYSSP 79
BLAST of mRNA_E-siliculosus-1a_F_contig1426.2512.1 vs. uniprot
Match: A0A7S1UA59_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UA59_9STRA) HSP 1 Score: 73.9 bits (180), Expect = 2.630e-15 Identity = 38/78 (48.72%), Postives = 55/78 (70.51%), Query Frame = 1
Query: 1 MHPLVRDLCKRFVLASRRHPSGEAWFKDKAREALQRNALLSSEEDIRRAVARGRRVVRDAEEFSKFSRYRAMRRRYSD 234
MHPLVRDL KRF+L R +P+G A + +A+ A+ NA L+ E +I+RAVA+GR +VR+ + +YRAMR+RY +
Sbjct: 28 MHPLVRDLYKRFLLVGREYPTGLADVRARAKAAILANAHLTEEVEIKRAVAKGRYMVREMYAVMQLKKYRAMRKRYEE 105
BLAST of mRNA_E-siliculosus-1a_F_contig1426.2512.1 vs. uniprot
Match: L1J1M7_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J1M7_GUITC) HSP 1 Score: 65.9 bits (159), Expect = 2.170e-12 Identity = 38/78 (48.72%), Postives = 48/78 (61.54%), Query Frame = 1
Query: 1 MHPLVRDLCKRFVLASRRHPSGEAWFKDKAREALQRNALLSSEEDIRRAVARGRRVVRDAE-EFSKFSRYRAMRRRYS 231
MHPLVRDL KRF+L R +P G K K +EA N L + +IRRAVARGR +R+ +F +YR M+ RYS
Sbjct: 1 MHPLVRDLYKRFILVGRDYPGGLQIIKKKVKEAFFTNRHLEDDIEIRRAVARGRWYIRNELCAIIQFKKYRVMKERYS 78
BLAST of mRNA_E-siliculosus-1a_F_contig1426.2512.1 vs. uniprot
Match: A0A7S2V0J7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0J7_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 4.160e-12 Identity = 37/81 (45.68%), Postives = 50/81 (61.73%), Query Frame = 1
Query: 1 MHPLVRDLCKRFVLASRRHPSGEAWFKDKAREALQRNALLSSEEDIRRAVARGRRVVRDAEEFSKFSRYRAMRRRYSDPAS 243
MH LVRDL KRFVLA + ++K +E+ RNA LSSEEDI+RAV GR +V++ + +YR M+ RY + S
Sbjct: 7 MHALVRDLYKRFVLAGSYYHEPWVLTREKVKESFFRNANLSSEEDIKRAVHYGRYMVKEMVALEQLKKYRTMKHRYGEKQS 87
BLAST of mRNA_E-siliculosus-1a_F_contig1426.2512.1 vs. uniprot
Match: A0A5A8CP96_CAFRO (Complex1_LYR_dom domain-containing protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CP96_CAFRO) HSP 1 Score: 64.3 bits (155), Expect = 7.960e-12 Identity = 35/76 (46.05%), Postives = 50/76 (65.79%), Query Frame = 1
Query: 1 MHPLVRDLCKRFVLASRRHPSGEAWFKDKAREALQRNALLSSEEDIRRAVARGRRVVRDAEEFSKFSRYRAMRRRY 228
MHPLVRDL KRF++A R +P G + +A+ A Q NA L+ E I+RAVA+GR VR+ +YR++++RY
Sbjct: 1 MHPLVRDLYKRFLVAGRDYPQGLDVVRRRAKLAFQENAHLTDEVAIKRAVAKGRYWVREIHATHALHKYRSIKKRY 76
BLAST of mRNA_E-siliculosus-1a_F_contig1426.2512.1 vs. uniprot
Match: A0A485K3V6_9STRA (Aste57867_786 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K3V6_9STRA) HSP 1 Score: 64.7 bits (156), Expect = 1.150e-11 Identity = 33/77 (42.86%), Postives = 52/77 (67.53%), Query Frame = 1
Query: 1 MHPLVRDLCKRFVLASRRHPSGEAWFKDKAREALQRNALLSSEEDIRRAVARGRRVVRDAEEFSKFSRYRAMRRRYS 231
MHPLVRD KR +L R +P G + ++KA+EA + A L+++E+I+RAV RGR + ++ + +YRAM +RY+
Sbjct: 2 MHPLVRDAYKRLLLVGRDYPLGLDYVREKAKEAFLKQAHLTNDEEIKRAVHRGRWMAKEMIGVIQLKKYRAMNQRYT 78
BLAST of mRNA_E-siliculosus-1a_F_contig1426.2512.1 vs. uniprot
Match: A0A6G0WG47_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WG47_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 1.670e-11 Identity = 32/77 (41.56%), Postives = 52/77 (67.53%), Query Frame = 1
Query: 1 MHPLVRDLCKRFVLASRRHPSGEAWFKDKAREALQRNALLSSEEDIRRAVARGRRVVRDAEEFSKFSRYRAMRRRYS 231
MHPLVRD+ KR ++ R +P G + ++KA+EA + A L+++E+I+RAV RGR +V++ + +YR M RY+
Sbjct: 1 MHPLVRDVYKRILVVGRDYPMGLDYVREKAKEAFYKEAHLTADEEIKRAVHRGRWMVKEMIGVIQLKKYRTMNARYT 77
BLAST of mRNA_E-siliculosus-1a_F_contig1426.2512.1 vs. uniprot
Match: A0A7S2C6K2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C6K2_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 2.020e-11 Identity = 34/78 (43.59%), Postives = 50/78 (64.10%), Query Frame = 1
Query: 1 MHPLVRDLCKRFVLASRRHPSGEAWFKDKAREALQRNALLSSEEDIRRAVARGRRVVRDAEEFSKFSRYRAMRRRYSD 234
MHPLVRDL KRF+ R +P + +DKAREA+ +N L+ +I AV RGR +V++ + +YRA+++RY D
Sbjct: 50 MHPLVRDLFKRFIYVGRDYPLPPPYVRDKAREAILKNKDLTDAREIIEAVKRGRWMVKEIIGVIQLKKYRALKKRYYD 127
BLAST of mRNA_E-siliculosus-1a_F_contig1426.2512.1 vs. uniprot
Match: A0A067CLU1_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CLU1_SAPPC) HSP 1 Score: 59.3 bits (142), Expect = 1.560e-9 Identity = 30/77 (38.96%), Postives = 50/77 (64.94%), Query Frame = 1
Query: 1 MHPLVRDLCKRFVLASRRHPSGEAWFKDKAREALQRNALLSSEEDIRRAVARGRRVVRDAEEFSKFSRYRAMRRRYS 231
M P VRDL KRF++ + +P G + + K +EA + A L+ E +I++AV+RGR +V++ + +YRAM +RY+
Sbjct: 1 MQPRVRDLYKRFLVVGKDYPLGLEYVRPKVKEAFFKKAALADEAEIKKAVSRGRWMVKEMIGVIQLKKYRAMNQRYT 77
BLAST of mRNA_E-siliculosus-1a_F_contig1426.2512.1 vs. uniprot
Match: A0A024TFL8_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TFL8_9STRA) HSP 1 Score: 59.3 bits (142), Expect = 1.600e-9 Identity = 32/77 (41.56%), Postives = 49/77 (63.64%), Query Frame = 1
Query: 1 MHPLVRDLCKRFVLASRRHPSGEAWFKDKAREALQRNALLSSEEDIRRAVARGRRVVRDAEEFSKFSRYRAMRRRYS 231
MHPLVRD+ KR + R +P G + ++KA+ + A L++EEDI+RAV GR V++ + +YRAM +RY+
Sbjct: 1 MHPLVRDVYKRVLAVGRDYPLGLDYVREKAKATFFKQAHLTAEEDIKRAVHVGRWKVKEMVGVIQLKKYRAMNQRYT 77 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1426.2512.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1426.2512.1 >prot_E-siliculosus-1a_F_contig1426.2512.1 ID=prot_E-siliculosus-1a_F_contig1426.2512.1|Name=mRNA_E-siliculosus-1a_F_contig1426.2512.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=84bp MHPLVRDLCKRFVLASRRHPSGEAWFKDKAREALQRNALLSSEEDIRRAVback to top mRNA from alignment at E-siliculosus-1a_F_contig1426:25177..25428+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1426.2512.1 ID=mRNA_E-siliculosus-1a_F_contig1426.2512.1|Name=mRNA_E-siliculosus-1a_F_contig1426.2512.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=252bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1426:25177..25428+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1426:25177..25428+ >mRNA_E-siliculosus-1a_F_contig1426.2512.1 ID=mRNA_E-siliculosus-1a_F_contig1426.2512.1|Name=mRNA_E-siliculosus-1a_F_contig1426.2512.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=504bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1426:25177..25428+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |