mRNA_E-siliculosus-1a_F_contig1421.2486.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1421.2486.1
Unique NamemRNA_E-siliculosus-1a_F_contig1421.2486.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1421.2486.1 vs. uniprot
Match: D8LIB3_ECTSI (Amino_oxidase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIB3_ECTSI)

HSP 1 Score: 602 bits (1553), Expect = 1.890e-213
Identity = 305/327 (93.27%), Postives = 311/327 (95.11%), Query Frame = 1
Query:    1 VRWCTGSVTEKIFAPMVDKIKARSPNNNSSSCGNGGEIRGGMFVTDVEVGDDNKVTSVLAKNSDGETVSFEADAVVMCVSVQGVKKLLSSCTGLSAARPDLRRAMSLRSVDVMATRLWFDRKVAVKNPSNVIAGFEDSVGGTFFHLNDMQDEYRDSEGSVVASDFYHASELLPLSDEQIVERVHKTYLSTCVPEFRQEPDCKVIDSWVGRFPQAVTCFSPGSYVNRPLQAVRGSNVFVAGDWVKGVDHGANGLSQERAYVTGLTAANHVMDSFPGVEARRTPVLQTEPDEPQVAAGKRANKSVRGALRRLGLPDPILDFTVFPKFFP 981
            VRWCTGSVTEKIFAPMVDKIK           GNGGEIRGGMFVTDVEVGDD KVTSVLAKN++GETVSFEADAVVMCVSVQGVKKLLSSCTGLSAARPDLRRAMSLRSVDVMATRLWFDRKV VKNPSNVIAGFEDSVGGTFFHLNDMQDEYR+SEGSVVASDFYHASELLPLSDEQIVERVHKTYLSTCVPEFR   DCKVIDSWVGRFPQAVTCFSPGSYVNRPLQAVRGSNVFVAGDWVKGVDHGANGLSQERAYVTGLTAAN+VMDSFPGVEARR+PVLQTEPDEPQVAAGKR+NKSVRGALRRLGLPDPILDFTVFPKFFP
Sbjct:  232 VRWCTGSVTEKIFAPMVDKIK-----------GNGGEIRGGMFVTDVEVGDDKKVTSVLAKNAEGETVSFEADAVVMCVSVQGVKKLLSSCTGLSAARPDLRRAMSLRSVDVMATRLWFDRKVTVKNPSNVIAGFEDSVGGTFFHLNDMQDEYRESEGSVVASDFYHASELLPLSDEQIVERVHKTYLSTCVPEFR---DCKVIDSWVGRFPQAVTCFSPGSYVNRPLQAVRGSNVFVAGDWVKGVDHGANGLSQERAYVTGLTAANYVMDSFPGVEARRSPVLQTEPDEPQVAAGKRSNKSVRGALRRLGLPDPILDFTVFPKFFP 544          
BLAST of mRNA_E-siliculosus-1a_F_contig1421.2486.1 vs. uniprot
Match: A0A383VDW2_TETOB (Amino_oxidase domain-containing protein n=2 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VDW2_TETOB)

HSP 1 Score: 299 bits (766), Expect = 7.950e-94
Identity = 161/319 (50.47%), Postives = 220/319 (68.97%), Query Frame = 1
Query:    1 VRWCTGSVTEKIFAPMVDKIKARSPNNNSSSCGNGGEIRGGMFVTDVEVGDDNK-VTSVLAKN-SDGETVSFEADAVVMCVSVQGVKKLLSSCTGLSAARPDLRRAMSLRSVDVMATRLWFDRKVAVKNPSNVIAGFEDSVGGTFFHLNDMQDEYRDSEGSVVASDFYHASELLPLSDEQIVERVHKTYLSTCVPEFRQEPDCKVIDSWVGRFPQAVTCFSPGSYVNRPLQAVRGSNVFVAGDWVKGVDHGANGLSQERAYVTGLTAANHVMDSFPGVEARRTPVLQTEPDEPQVAAGKRANKSVRGALRRLGLPDPIL 951
            V W  GS+ E IF PMV++I++            GG++ GG  VTD++ G D + + +V+ ++ + G + + EADAVV  + + G++KL+  C  L   R + R+ M+LRS+DV+ATRLWFD+ V  + P+NV++GFE + G TFF+LN++QDEYRD+ GSV+ +DFY A+ELLPL+DE++V RV K++L  C   F+      V+DS V RFP+AVT FSPGSY +RP QA    N F+AGDWVKGV HGANGLSQERAYVTGLTAAN V+D     +  +  VL  EPDEP +AA K+AN++VRG L  LGL  P+L
Sbjct:  294 VCWPRGSIAETIFTPMVERIQSA-----------GGQVLGGQLVTDLQPGADGRSIAAVVTRDVATGSSTTHEADAVVFAIGITGMQKLVQQCR-LLGDRQEFRKVMNLRSIDVIATRLWFDKLVPTRYPANVLSGFETTAGATFFNLNNLQDEYRDAPGSVITADFYGANELLPLTDEEVVARV-KSHLEVCERGFK---GATVVDSAVLRFPKAVTHFSPGSYASRPFQATSIPNCFLAGDWVKGVSHGANGLSQERAYVTGLTAANLVVDHCG--QGSKAVVLDVEPDEPHIAAAKQANQAVRGVLDSLGLKSPLL 594          
BLAST of mRNA_E-siliculosus-1a_F_contig1421.2486.1 vs. uniprot
Match: A0A5J4XU83_9CHLO (Amine oxidase n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XU83_9CHLO)

HSP 1 Score: 291 bits (745), Expect = 1.500e-90
Identity = 158/318 (49.69%), Postives = 212/318 (66.67%), Query Frame = 1
Query:    1 VRWCTGSVTEKIFAPMVDKIKARSPNNNSSSCGNGGEIRGGMFVTDVEVGDDN-KVTSVLAKNSDGETVSFEADAVVMCVSVQGVKKLLSSCTGLSAARPDLRRAMSLRSVDVMATRLWFDRKVAVKNPSNVIAGFEDSVGGTFFHLNDMQDEYRDSEGSVVASDFYHASELLPLSDEQIVERVHKTYLSTCVPEFRQEPDCKVIDSWVGRFPQAVTCFSPGSYVNRPLQAVRGSNVFVAGDWVKGVDHGANGLSQERAYVTGLTAANHVMDSFP-GVEARRTPVLQTEPDEPQVAAGKRANKSVRGALRRLGLPDPI 948
            V WC GSV+E+IF P+VD I+            +GG+I GG  VTDV +  D    T V A   +G++  + ADAV+  V + G+KKL+S+C  L   RP+ R  M+L+ +DV+ATRLW D+ +  K P+NV+AGFE  VGGT+F+L+++QDEY+   G+V+A+DFYH++ L+PL D +IV +V K+ L  C P FR     +V+DS V R+  AVT FSPGSY +RPLQ     NVF+AGDWV+G+DHGANGLSQERAY+TGL AAN V+     GV A   P++  E DEP V AGKRAN++V+G L    LP P 
Sbjct:  308 VCWCKGSVSERIFLPLVDLIRK-----------SGGKINGGQLVTDVTIDSDTGAATGVHASTKEGQSTYYPADAVIFAVGITGMKKLISNCPALGT-RPEFRGIMNLKGLDVIATRLWLDQSLPTKFPANVLAGFEPGVGGTYFNLSELQDEYKTEPGTVIAADFYHSNTLMPLPDAEIVAKV-KSNLDHCEPSFRS---AQVVDSAVLRWSSAVTHFSPGSYASRPLQTTSLGNVFMAGDWVRGLDHGANGLSQERAYITGLAAANLVIQGLSHGVPA---PIIPVEADEPHVVAGKRANQAVQGFLE--ALPSPF 604          
BLAST of mRNA_E-siliculosus-1a_F_contig1421.2486.1 vs. uniprot
Match: A0A0G4G8W3_VITBC (Amino_oxidase domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4G8W3_VITBC)

HSP 1 Score: 288 bits (737), Expect = 3.100e-90
Identity = 160/328 (48.78%), Postives = 219/328 (66.77%), Query Frame = 1
Query:    1 VRWCTGSVTEKIFAPMVDKIKARSPNNNSSSCGNGGEIRGGMFVTDVEVGDDN-KVTSVLAKNS-DGETVSFEADAVVMCVSVQGVKKLLSSCTGLSAARPDLRRAMSLRSVDVMATRLWFDRKVAVKNPSNVIAGFEDSVGGTFFHLNDMQDEYRDSEGSVVASDFYHASELLPLSDEQIVERVHKTYLSTCVPEFRQEPDCKVIDSWVGRFPQAVTCFSPGSYVNRPLQAVRGSNVFVAGDWVKGVDHGANGLSQERAYVTGLTAANHVMDSFPGVEARRTPVLQTEPDEPQVAAGKRANKSVRGALRR-LGLPDPILDFTVFPKF 975
            V WC G+++E+IF P+V +I++           +GG ++GG FVT ++V +    V  V+AK++  GE   FE DAVVM V +  +KKL++    L   RP+ R+ M+L+S+DV++TR+W D+K+  + PSNV +GF+++VGGTFFHLND+QDEYRD+EGSVVA DFYHA+ELLPLSDEQIV ++  + LST  PE       KV+DS V RFPQAVT F+PG+Y NRP Q    +N+F+AGDWV+ + HGA GLSQERAYV+GL AAN  + +    + +   +L TE DE QV  GKR  K +R      LG P P     + P+F
Sbjct:  222 VAWCRGTLSERIFMPLVSRIES-----------SGGTVKGGQFVTSIDVDEQTGAVRRVMAKDAASGEERVFETDAVVMAVGINAMKKLVTQSPSLK--RPEFRKVMNLKSLDVISTRVWLDKKIDFEYPSNVFSGFDETVGGTFFHLNDLQDEYRDAEGSVVACDFYHAAELLPLSDEQIVGKIF-SMLSTVKPEVSS---AKVVDSAVLRFPQAVTAFAPGTYANRPTQTTSINNLFLAGDWVR-LKHGAQGLSQERAYVSGLAAANLAVTALG--QGKTATILDTEEDEVQVQLGKRVLKGLRNTYSTVLGRPPPSPLPNLIPRF 529          
BLAST of mRNA_E-siliculosus-1a_F_contig1421.2486.1 vs. uniprot
Match: A0A7J7QK55_9CHLO (Amino_oxidase domain-containing protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QK55_9CHLO)

HSP 1 Score: 285 bits (729), Expect = 3.830e-89
Identity = 158/317 (49.84%), Postives = 206/317 (64.98%), Query Frame = 1
Query:    1 VRWCTGSVTEKIFAPMVDKIKARSPNNNSSSCGNGGEIRGGMFVTDVEVGDDNKVTSVLAKNSDGETVSFEADAVVMCVSVQGVKKLLSSCTGLSAARPDLRRAMSLRSVDVMATRLWFDRKVAVKNPSNVIAGFEDSVGGTFFHLNDMQDEYRDSEGSVVASDFYHASELLPLSDEQIVERVHKTYLSTCVPEFRQEPDCKVIDSWVGRFPQAVTCFSPGSYVNRPLQAVRGSNVFVAGDWVKGVDHGANGLSQERAYVTGLTAANHVMDSFPGVEARRTPVLQTEPDEPQVAAGKRANKSVRGALRRLGLPDPIL 951
            V W  GS+ E IF PMV++I+A          G+   I G +   DV                 G + + EADAVV  + + G++KL+  C  L   R + R+ M+LRS+DV+ATRLWFD+ V  + P+NV++GFE + G TFF+LND+QDEYR + GSV+ +DFY A+ELLPLSD+++V RV K++L  C P F+   D  V+DS V RFP+AVT FSPGSY +RP Q     N F+AGDWVKGV HGANGLSQERAYVTGLTAAN V+D     +  +  VL  EPDEP +AA K+AN++VRG L  LGL  P+L
Sbjct:  231 VCWPRGSIAETIFTPMVERIQAAG----GQGAGSAASI-GAVVTRDVAT---------------GSSTTHEADAVVFAIGITGMQKLVQQCR-LLGDRQEFRKVMNLRSIDVIATRLWFDKLVRTRYPANVLSGFETTAGATFFNLNDLQDEYRYAPGSVITADFYGANELLPLSDDEVVARV-KSHLEVCEPGFK---DANVVDSAVLRFPKAVTHFSPGSYASRPHQVTSIPNCFLAGDWVKGVSHGANGLSQERAYVTGLTAANLVVDHCG--QGSKAVVLDVEPDEPHIAAAKQANQAVRGVLDSLGLKSPLL 520          
BLAST of mRNA_E-siliculosus-1a_F_contig1421.2486.1 vs. uniprot
Match: A0A835Y9J8_9CHLO (Amino_oxidase domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835Y9J8_9CHLO)

HSP 1 Score: 287 bits (735), Expect = 4.390e-89
Identity = 163/322 (50.62%), Postives = 224/322 (69.57%), Query Frame = 1
Query:    1 VRWCTGSVTEKIFAPMVDKIKARSPNNNSSSCGNGGEIRGGMFVTDVEVGDDN-KVTSVLAKN-SDGETVSFEADAVVMCVSVQGVKKLLSSCTGLSAARPDLRRAMSLRSVDVMATRLWFDRKVAVKNPSNVIAGFEDSVGGTFFHLNDMQDEYRDSEGSVVASDFYHASELLPLSDEQIVERVHKTYLSTCVPEFRQEPDCKVIDSWVGRFPQAVTCFSPGSYVNRPLQAVRGSNVFVAGDWVKGVDHGANGLSQERAYVTGLTAANHVMDSFPGVEARRTPVLQTEPDEPQVAAGKRANKSVRGALR---RLGLPDPIL 951
            V W  GS+ E IF P+V++I+A            GG ++G   VT V+V   + +VTSV A + + GE  ++ ADA+V  V + G++KL+++   L A++PD R  M LR++DV+ATR+WFDR+VA + P+NV++GFE + G TFF+LND+QDEY+D+ GSV+++DFYHA+ LLPLSDEQIV+RV  +++STC P F+     +V+DS V R+P+AVT FSPGSY  RP QA    N+F+AGDWVKGV HGANGLSQERAYVTGL+AAN V+    G+ ++   +L  EPDEP +AA + A   VRGA+     LGL  P L
Sbjct:  305 VCWPKGSIAETIFTPLVERIRAA-----------GGRVQGNRLVTGVDVDPSSGEVTSVRAADRTTGELFTYPADALVFAVGITGMQKLITATPAL-ASQPDFRSIMELRALDVIATRIWFDRRVATRYPANVLSGFEPTAGATFFNLNDLQDEYKDAPGSVISADFYHANALLPLSDEQIVQRV-VSHISTCEPGFKS---AQVVDSVVLRYPKAVTHFSPGSYPFRPFQATTIPNLFMAGDWVKGVPHGANGLSQERAYVTGLSAANLVVQRL-GLGSQAE-ILDVEPDEPHIAAARAA---VRGAVEFAGALGLKSPFL 605          
BLAST of mRNA_E-siliculosus-1a_F_contig1421.2486.1 vs. uniprot
Match: A0A8J4F5Z3_9CHLO (Amino_oxidase domain-containing protein n=3 Tax=Volvox TaxID=3066 RepID=A0A8J4F5Z3_9CHLO)

HSP 1 Score: 286 bits (731), Expect = 1.820e-88
Identity = 160/319 (50.16%), Postives = 213/319 (66.77%), Query Frame = 1
Query:    1 VRWCTGSVTEKIFAPMVDKIKARSPNNNSSSCGNGGEIRGGMFVTDVEVGD-DNKVTSVLAKN-SDGETVSFEADAVVMCVSVQGVKKLLSSCTGLSAARPDLRRAMSLRSVDVMATRLWFDRKVAVKNPSNVIAGFEDSVGGTFFHLNDMQDEYRDSEGSVVASDFYHASELLPLSDEQIVERVHKTYLSTCVPEFRQEPDCKVIDSWVGRFPQAVTCFSPGSYVNRPLQAVRGSNVFVAGDWVKGVDHGANGLSQERAYVTGLTAANHVMDSFPGVEARRTPVLQTEPDEPQVAAGKRANKSVRGALRRLGLPDPIL 951
            V W  GS+ E IF PMV+KI+             GG + G   VT + + D   +V+SV A + S GE  S+  DA V  V + G++KL+S+   L A +PD R  M LRS+DV+ATR+WFDR+VA + P+NV++GFE + G TFF+LND+QDEYR+  G+V+++DFYHA+ LLPLSD++IV+RV  ++++TC P F+     KV DS V RFP+AVT FSPGSY +RP QA    NVF+AGDWVKGV HGANGLSQERAYVTGL+AAN V+    G   +   +L  EPDEP +AA + A + +R  +   GL  P L
Sbjct:  306 VCWPRGSIAELIFQPMVEKIRMA-----------GGRVLGNRLVTGLTLDDATGEVSSVEAVDRSTGEIASYPTDAAVFAVGISGMQKLVSANPAL-AKQPDFRSIMELRSLDVIATRIWFDRRVATRYPANVLSGFETTAGATFFNLNDLQDEYRNEPGTVISADFYHANSLLPLSDQEIVDRV-VSHVTTCEPGFK---GAKVTDSIVLRFPKAVTHFSPGSYQHRPFQATTIPNVFMAGDWVKGVPHGANGLSQERAYVTGLSAANLVISRLGG-NGQPAQILDVEPDEPHIAAARAAVRGLREVVAAAGLRSPFL 607          
BLAST of mRNA_E-siliculosus-1a_F_contig1421.2486.1 vs. uniprot
Match: A0A2K3D0U9_CHLRE (Amino_oxidase domain-containing protein n=5 Tax=Chlamydomonas TaxID=3052 RepID=A0A2K3D0U9_CHLRE)

HSP 1 Score: 280 bits (717), Expect = 1.680e-86
Identity = 157/319 (49.22%), Postives = 211/319 (66.14%), Query Frame = 1
Query:    1 VRWCTGSVTEKIFAPMVDKIKARSPNNNSSSCGNGGEIRGGMFVTDVEVGD-DNKVTSV-LAKNSDGETVSFEADAVVMCVSVQGVKKLLSSCTGLSAARPDLRRAMSLRSVDVMATRLWFDRKVAVKNPSNVIAGFEDSVGGTFFHLNDMQDEYRDSEGSVVASDFYHASELLPLSDEQIVERVHKTYLSTCVPEFRQEPDCKVIDSWVGRFPQAVTCFSPGSYVNRPLQAVRGSNVFVAGDWVKGVDHGANGLSQERAYVTGLTAANHVMDSFPGVEARRTPVLQTEPDEPQVAAGKRANKSVRGALRRLGLPDPIL 951
            V W  G++ E IF PMV++I+A            GG ++G   VT +       +V SV  A  S GET S+ ADA+V  V + G++KL+++   L A + D R  M LR++DV+ATR+WFDR+V+ + P+NV++GFE + G TFF+LND+QDEYRD+ GSV+++DFYHA+ LLPLSDE IV+RV + +++ C P F+     KV+DS V R+P+AVT FSPGSY  RP QA    N F+AGDWVKGV HGANGLSQERAYVTGL AAN VM    G   ++  +L  +PDEP +AA + A +S R     LG+  P L
Sbjct:  295 VCWPRGAIAELIFQPMVERIRAA-----------GGRVQGSRLVTGLTTDPVTGEVVSVEAADRSTGETYSYPADALVFAVGITGMQKLVAATPAL-AQKADFRAIMELRALDVIATRVWFDRRVSTRYPANVLSGFEATAGATFFNLNDLQDEYRDAPGSVISADFYHANALLPLSDEAIVQRVVE-HVAKCEPGFK---GAKVVDSIVLRYPKAVTHFSPGSYPYRPFQATSIPNTFMAGDWVKGVPHGANGLSQERAYVTGLVAANLVMQRLGG-GGQQAEILDVDPDEPHIAAARTAARSARQFADALGIRSPFL 596          
BLAST of mRNA_E-siliculosus-1a_F_contig1421.2486.1 vs. uniprot
Match: D8TQS8_VOLCA (Amino_oxidase domain-containing protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TQS8_VOLCA)

HSP 1 Score: 279 bits (714), Expect = 1.430e-85
Identity = 157/318 (49.37%), Postives = 207/318 (65.09%), Query Frame = 1
Query:    1 VRWCTGSVTEKIFAPMVDKIKARSPNNNSSSCGNGGEIRGGMFVTDVEVGD-DNKVTSVLAKNSDGETVSFEADAVVMCVSVQGVKKLLSSCTGLSAARPDLRRAMSLRSVDVMATRLWFDRKVAVKNPSNVIAGFEDSVGGTFFHLNDMQDEYRDSEGSVVASDFYHASELLPLSDEQIVERVHKTYLSTCVPEFRQEPDCKVIDSWVGRFPQAVTCFSPGSYVNRPLQAVRGSNVFVAGDWVKGVDHGANGLSQERAYVTGLTAANHVMDSFPGVEARRTPVLQTEPDEPQVAAGKRANKSVRGALRRLGLPDPIL 951
            V W  GS+ E IF PMV++I+             GG + G   VT + V     +VTS           S+ ADAVV  V + G++KL+S+   L A +PD R  M LRS+DV+ATR+WFDR+V  + P+NV++GFE + G TFF+LND+QDEYRD  G+V+++DFYHA+ LLPLSD++IVERV  ++++TC P F+     KV+DS V RF +AVT FSPGSY +RP QA    NVF+AGDWVKGV HGANGLSQERAYVTGL+AAN VM    G   +   +L  EPDEP +AA +   + +R     +GL +P L
Sbjct:  352 VCWPRGSIAELIFQPMVERIRTA-----------GGRVLGSRLVTGLSVDPLTGEVTSA---------ASYPADAVVFAVGISGMQKLVSATPAL-AKQPDFRNIMELRSLDVIATRIWFDRRVPTRYPANVLSGFESTAGATFFNLNDLQDEYRDEPGTVISADFYHANSLLPLSDQEIVERV-VSHVATCEPGFK---GAKVVDSIVLRFARAVTHFSPGSYQHRPFQATSIPNVFMAGDWVKGVPHGANGLSQERAYVTGLSAANLVMSRLGG-GGQPAQILDVEPDEPHIAAARSTVRGLRELAGAVGLRNPFL 643          
BLAST of mRNA_E-siliculosus-1a_F_contig1421.2486.1 vs. uniprot
Match: A0A250WSE0_9CHLO (Amino_oxidase domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WSE0_9CHLO)

HSP 1 Score: 276 bits (706), Expect = 2.190e-85
Identity = 156/313 (49.84%), Postives = 212/313 (67.73%), Query Frame = 1
Query:    1 VRWCTGSVTEKIFAPMVDKIKARSPNNNSSSCGNGGEIRGGMFVTDVEVGDDNKVTSVLAKNSD-GETVSFEADAVVMCVSVQGVKKLLSSCTGLSAARPDLRRAMSLRSVDVMATRLWFDRKVAVKNPSNVIAGFED--SVGGTFFHLNDMQDEYRDSEGSVVASDFYHASELLPLSDEQIVERVHKTYLSTCVPEFRQEPDCKVIDSWVGRFPQAVTCFSPGSYVNRPLQAVRGSNVFVAGDWVKGVDHGANGLSQERAYVTGLTAANHVMDSFPGVEARRTPVLQTEPDEPQVAAGKRANKSVRGALRRL 930
            V WC G++ E+IF+P++ +I+A+           GG I G   VT +E+G++ +VT+V A + D G    + ADA+V  + V G++KL+SSC  L A+ P+ R  M+L+S+DV+ATR+W D+KV  K P+NV++GFE     G T+FHLND+QDEYRD+ GSV+ +DFY+A+ LLPLSD+ IV+RV K +L TC P   +    +V+DS V RFP+AVT FSPGS+  RP Q     N+FVAGDWVKGV HGANGLSQERAYVTGL AAN V+D   G+ +R   +L TEPDEP +   K A +  R  +  L
Sbjct:  244 VCWCKGTIAERIFSPLIRRIEAK-----------GGSIVGSRVVTGLELGENGEVTAVKAMDKDTGLDTIYPADALVFAIGVGGMQKLVSSCPQL-ASLPEFRATMNLKSLDVVATRIWLDKKVNTKYPANVLSGFEPVAGAGATYFHLNDLQDEYRDAPGSVITADFYNAAALLPLSDQDIVDRV-KGHLETCEPAAFK--GTQVLDSAVLRFPKAVTHFSPGSHQYRPYQNTSIPNLFVAGDWVKGVLHGANGLSQERAYVTGLIAANLVVDRL-GMGSRAR-ILDTEPDEPHIQIAKEAARQARMVIESL 539          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1421.2486.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LIB3_ECTSI1.890e-21393.27Amino_oxidase domain-containing protein n=1 Tax=Ec... [more]
A0A383VDW2_TETOB7.950e-9450.47Amino_oxidase domain-containing protein n=2 Tax=Te... [more]
A0A5J4XU83_9CHLO1.500e-9049.69Amine oxidase n=1 Tax=Trebouxia sp. A1-2 TaxID=260... [more]
A0A0G4G8W3_VITBC3.100e-9048.78Amino_oxidase domain-containing protein n=1 Tax=Vi... [more]
A0A7J7QK55_9CHLO3.830e-8949.84Amino_oxidase domain-containing protein n=1 Tax=Sc... [more]
A0A835Y9J8_9CHLO4.390e-8950.62Amino_oxidase domain-containing protein n=1 Tax=Ed... [more]
A0A8J4F5Z3_9CHLO1.820e-8850.16Amino_oxidase domain-containing protein n=3 Tax=Vo... [more]
A0A2K3D0U9_CHLRE1.680e-8649.22Amino_oxidase domain-containing protein n=5 Tax=Ch... [more]
D8TQS8_VOLCA1.430e-8549.37Amino_oxidase domain-containing protein n=1 Tax=Vo... [more]
A0A250WSE0_9CHLO2.190e-8549.84Amino_oxidase domain-containing protein n=1 Tax=Ch... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1421contigE-siliculosus-1a_F_contig1421:25891..32507 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start0
Stop1
Cds size984
Model size984
Exons9
Ec32 orthologEc-24_001500.1
Ec32 ortholog descriptionAmine oxidase
Hectar predicted targeting categoryother localisation
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.E
EggNOG OGsCOG1231@1,KOG0029@2759
EggNOG free text desc.oxidoreductase activity
Seed eggNOG ortholog2880.D8LIB3
Seed ortholog evalue1.9e-170
Seed ortholog score605.1
Taxonomic scopeEukaryota
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927936.579665-CDS-E-siliculosus-1a_F_contig1421:25890..259981622927936.579665-CDS-E-siliculosus-1a_F_contig1421:25890..25998Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1421 25891..25998 -
1696318744.3997724-CDS-E-siliculosus-1a_F_contig1421:25890..259981696318744.3997724-CDS-E-siliculosus-1a_F_contig1421:25890..25998Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1421 25891..25998 -
1622927936.593237-CDS-E-siliculosus-1a_F_contig1421:26882..269931622927936.593237-CDS-E-siliculosus-1a_F_contig1421:26882..26993Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1421 26883..26993 -
1696318744.4094656-CDS-E-siliculosus-1a_F_contig1421:26882..269931696318744.4094656-CDS-E-siliculosus-1a_F_contig1421:26882..26993Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1421 26883..26993 -
1622927936.6032155-CDS-E-siliculosus-1a_F_contig1421:27321..274901622927936.6032155-CDS-E-siliculosus-1a_F_contig1421:27321..27490Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1421 27322..27490 -
1696318744.4179428-CDS-E-siliculosus-1a_F_contig1421:27321..274901696318744.4179428-CDS-E-siliculosus-1a_F_contig1421:27321..27490Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1421 27322..27490 -
1622927936.6151462-CDS-E-siliculosus-1a_F_contig1421:28637..287831622927936.6151462-CDS-E-siliculosus-1a_F_contig1421:28637..28783Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1421 28638..28783 -
1696318744.4271352-CDS-E-siliculosus-1a_F_contig1421:28637..287831696318744.4271352-CDS-E-siliculosus-1a_F_contig1421:28637..28783Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1421 28638..28783 -
1622927936.6280558-CDS-E-siliculosus-1a_F_contig1421:29854..299381622927936.6280558-CDS-E-siliculosus-1a_F_contig1421:29854..29938Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1421 29855..29938 -
1696318744.4362702-CDS-E-siliculosus-1a_F_contig1421:29854..299381696318744.4362702-CDS-E-siliculosus-1a_F_contig1421:29854..29938Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1421 29855..29938 -
1622927936.643792-CDS-E-siliculosus-1a_F_contig1421:30831..309511622927936.643792-CDS-E-siliculosus-1a_F_contig1421:30831..30951Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1421 30832..30951 -
1696318744.446051-CDS-E-siliculosus-1a_F_contig1421:30831..309511696318744.446051-CDS-E-siliculosus-1a_F_contig1421:30831..30951Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1421 30832..30951 -
1622927936.6919763-CDS-E-siliculosus-1a_F_contig1421:31435..315191622927936.6919763-CDS-E-siliculosus-1a_F_contig1421:31435..31519Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1421 31436..31519 -
1696318744.4615324-CDS-E-siliculosus-1a_F_contig1421:31435..315191696318744.4615324-CDS-E-siliculosus-1a_F_contig1421:31435..31519Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1421 31436..31519 -
1622927936.7087157-CDS-E-siliculosus-1a_F_contig1421:32104..321701622927936.7087157-CDS-E-siliculosus-1a_F_contig1421:32104..32170Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1421 32105..32170 -
1696318744.4736917-CDS-E-siliculosus-1a_F_contig1421:32104..321701696318744.4736917-CDS-E-siliculosus-1a_F_contig1421:32104..32170Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1421 32105..32170 -
1622927936.7224896-CDS-E-siliculosus-1a_F_contig1421:32411..325071622927936.7224896-CDS-E-siliculosus-1a_F_contig1421:32411..32507Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1421 32412..32507 -
1696318744.484073-CDS-E-siliculosus-1a_F_contig1421:32411..325071696318744.484073-CDS-E-siliculosus-1a_F_contig1421:32411..32507Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1421 32412..32507 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1421.2486.1prot_E-siliculosus-1a_F_contig1421.2486.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1421 25891..32507 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1421.2486.1

>prot_E-siliculosus-1a_F_contig1421.2486.1 ID=prot_E-siliculosus-1a_F_contig1421.2486.1|Name=mRNA_E-siliculosus-1a_F_contig1421.2486.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=328bp
VRWCTGSVTEKIFAPMVDKIKARSPNNNSSSCGNGGEIRGGMFVTDVEVG
DDNKVTSVLAKNSDGETVSFEADAVVMCVSVQGVKKLLSSCTGLSAARPD
LRRAMSLRSVDVMATRLWFDRKVAVKNPSNVIAGFEDSVGGTFFHLNDMQ
DEYRDSEGSVVASDFYHASELLPLSDEQIVERVHKTYLSTCVPEFRQEPD
CKVIDSWVGRFPQAVTCFSPGSYVNRPLQAVRGSNVFVAGDWVKGVDHGA
NGLSQERAYVTGLTAANHVMDSFPGVEARRTPVLQTEPDEPQVAAGKRAN
KSVRGALRRLGLPDPILDFTVFPKFFP*
back to top

mRNA from alignment at E-siliculosus-1a_F_contig1421:25891..32507-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1421.2486.1 ID=mRNA_E-siliculosus-1a_F_contig1421.2486.1|Name=mRNA_E-siliculosus-1a_F_contig1421.2486.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=6617bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1421:25891..32507- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GTCAGGTGGTGCACCGGTTCGGTCACCGAGAAGATCTTCGCCCCGATGGT GGACAAGATAAAGGCACGTAGTCCCAATAATAATTCTAGCTCTTGCGTTC CCCGCCTTTCCTATTATTGGTGGACTGGACAATAACATATCTTCGCTCAC CATACCCCTCCAACGACGCCACTAGTTCATGGGCGGTATGCAAGCGCACA TCTCGCCTCTGTGCTCTACTGCTGTCGGACGCACCAAAAACAATCTTGCT CCCCGACAATGACTTGTTCCCCGACAATGACGGCTTGTGGTTTTATTTAC GTTGACGAATCCCCGTGTACGGGTGCTTTGCGTGCAGGGAAACGGCGGCG AAATCCGCGGAGGCATGTTCGTAACCGACGTGGAGGTGGGCGACGACAAC AAGGTGGGTTTTAGCGTGCAGGGAGGGATGTGGGTTGTACTTTACCAGCT CGGAGGCCCTTGCTTATTCAAAGCAAGTGGTTTCGGGGTTGGGGATTCGC GAAATTCCCATCGTGCAGTCCGCCGGAAGAACAAAAAAGCAAGAAGAGGA AGATTAACATGTGGGAGGTGAAATCGCGCTGGCCCTCAGTTCATTAATTT TCCACCGCCGGCTCCGTGGTTGAACCCTCAACAAAAATGGCTGGGGGGAT TTTCCGTGCAAATTGCTTTTCGGTAAAGTGAACTAAAACGAAACCGAGCT GCGCCGAGAAGCGCGGCTTCCCGCACGAGCAGAAATATTGGCACGTCTCA AGCATCAGCAGGTGACGCAAGCGCCGTTTAAAACCAGATTTCGTGCTGAA AGGCAGAAAAAGAACACACAAATACCAAACAAATAACACACACACAGCGC CCTCCCCCCCAAAAATAGCAATTGAATTAGCTTGAACGCTGCTCCGTTGG GGCCTTGGATCCCACCACCTCATCGCACGTAACCGTGAAAAAAAGAGAAA AAAACGCGAACACACCCATCCACCCCCGCCACTATCAGGTGACATCGGTG CTGGCGAAGAACTCCGACGGAGAGACGGTTTCGTTCGAGGCGGATGCCGT TGTCATGTGCGTCAGCGTCCAGGTGAGGGAGGGAGGCAAGGGCTGCGAGG GGGTGGGAGGGGAGGGGAACTCAGAAAGGAAAGGTGCTGTGTGTCGTAGG CGTGTGTTCTTTTTGTTGGTGCCTGTCTACCGTGTGGAGGCGTTGTCAGA GATAGGGGAACGCGGCTTTCCCGCGACTGCACAGAAGCTGCGCTTTGGGA ATGCGTTGCTGGATGTAGGGGACACGTGAAGCTGCGATGGACAAAAGCTG AGGTCAGGAACACATGGCCGGAAATAGGGCACACCGACTCTTGACCGCAA GCAAGTTGCGCGTGGGAACGCGTGTCCCAACCTGGTTCCAGTTGAAGTTC TCCTCTCTCGATCATTTATCACCCGATAACACACTTTCAACAGAACCCTA GCAATTGGTGCTAGCGACAACATATTCATGTGTTACCCAAAACATCCTAC TTATCGAAAAAACTCATATTTTTGTCGCCCTCTCGGCATCCCGTCCGTCT TCGCAGGGCGTGAAGAAGCTGCTCTCGTCGTGCACGGGGCTGTCGGCGGC GAGACCCGATCTCCGGCGAGCGATGTCGCTCAGGAGCGTCGATGTCATGG CGACGCGCCTCTGGTTCGACCGAAAGGTACCACGGTGTTTCGGGGTCCCC GAAATAAGGCGGTCTGAATAAGGTGGTCGCCCTATGCAACGCGGGTGAAA CTGGCTGGCACAGATTGGCTTGTGACCACGGAAGGCGGCCGCGTCAGTTG GACCAGTACGGACACTATACTGTAAGGCTGAACGGAGACCGGAACGGTTC TTAATGTGAAGACAACAATGTGATCGGATATTAGACGGTACTGAGCGGAG ACCGGAACGGTTTTTTAATGTCAAGACAACAACAACAACAACAACATGGA CGGAACAGTCACATTGTTCTTACACGTTTGAATAGGAGGACTGCCGAAAA CTAAGTCGACCATTGCTAGCTGCCCCACCGCCATCTTGTTCGGGGACCCC GAGTGTAGATACAAGTTGGCGCTTGCTGGCAGGCAAGAGAAGAGGGTGCA TGGTCGTGGCACTGGCGCGTACAGGCTTCGCTACGGCCCCTTCATACTAC GCGGCACGTCCGTGGCGTGCCTTTTAGAGTGAATTACGTGCTATGTCGAG AACCAGTTCTTGAACCTACTTCCTCCCTGTCCGAAGAGACGATGTGTTCG GCCTGTTTGTGTTAGTTGATGTTCATGCCACGTGCTATGTCGAACCTGAG CGGACCGAACCACACCCTAGGCAAGCAATACGCTATGCCATCTCCAACGA AACTGTTATCCCTGTCACGCCGTGAAGCGAATGAAGGCAGACCTTCTCTC ATCCCCATCCCCGCCCCTGCCCTTTTTTTCCCCTCTAAACAAATCCAAAT TCTGCCTTCGAACGCGTTGACTGCGTAGAATATGGAAGATTTCTTATAGG AGGTCGTCGCACCGTTTTCCGGTGCCCCACTCTCTTGTCTTCTGTTTTTT CTTTCTTTTTTTTTTTCAGGTGGCTGTGAAGAACCCGTCTAACGTGATCG CCGGCTTCGAGGACTCGGTAGGCGGGACGTTCTTCCACCTCAACGACATG CAGGTCAGGGGCCAGGGGGGGGAAGGCCACACGATGGTGTTGTTCCTCTG CTTCGAAAGCATGCGATTTTGGATCTCTGCCTCCGCCACGACAAGCGCAG TCTCTGCTCACCGTAGTAGTGTCATGGCTGCCGCGTGCATGTTTTCTACA GCATAATCTCGGTTGTGTTGCAGCCGCGGCGGCGACAGCCGCCCCAGCGG GTGCAGGTTTAGCAACAGAATGTCGAGGTCGTCCTAGCCAGTGGCAGTAG ACTTGGCAGGGTTTTTCGTATGTATGATGTCAACATGTTGGAGAAAGCAT TGTATCCGGGAGTTGGGTAAGGGTTAGGGAATAGGGTCTGCGTCTCCCCT CCCTGTTACGTTTCCTCATAAAACTTATTAATCGCGCCAAGGCGGTCCGC CAGTGGAGGTAAGGGGCGACGCGTCGCGACGTCGGGCGCCTCTATCGCCC GTGGAACCATTGCCCGAATGCGCGGCTGTTCCTTTCCCGCCTGCCCTCCA AAACTACCGCCCTCGCCCGTTGCTCCTTCGCTAAAAAAATATCGAGTGTT ATGTGTCGGGTTGGTGCAGCCTCCTGCGATGCGGTTGTCCCTGTCATGCT ATTGACGAGGTTCCCCTCCTTGCGTCTATTCGTCGGGTCACGTTCCCACC ACTCCCTTTTTTTTCCAAGGTTGCCTTATCTAGCGTTGCAGAGTTTGGAA AAATTAGCTCCGCTGGAAACCCAGACAAGGCTTTTGTTTTCGTCTTCGAC CAATCACCGGCCCATTTCGATGTCGAGTGTCGGTTTTTGATTTAAAACCT CGTTGACAACTGGCTGGGCCTGTGGATTTTGATACTGTTTTTTTTTTTAT TTTTTTTTTTATTTCGAACATTGTTGATACTGGTTTTTTATCGATACTGA CATTGACAATTGGTATTGCTTTTGATTGTCGAGAATTGCTCTACTGTCGG TTATATGTTTTTACTGTTCAAATCCCGTTGACAACTGGCTGGGCCAGTCG ATATTGATACTGATACTGATATCGGTATTTCTCTTGATTGTACTGCGAAC CTCGGTGATACCGGGCCTGGGCAGGACGAGTACCGAGACAGCGAGGGCAG CGTGGTGGCGTCGGACTTCTACCACGCCTCGGAGCTGCTGCCCCTGTCCG ACGAGCAGATCGTCGAGCGGGTCCACAAGACCTACCTTTCCACCTGCGTG CCCGAGTTCAGGCAAGAGCCGTCTCCTTCCTTCGGGACAAAAAAATAGAT ACAGCAGTCAGTCGTGGCCCCGGTTGTAACGGTTCCCTGTTTTGCGGGAT GCTCTGAATTAGCGGTTCCAAAACCTCGTGGCACGGCTGCACCTCGGTAG CCAATCCGGCCGGCCAATTTGTGGCGCTATGCGCAGCTAAACCGGGACCA CGACCTGTAATTCTGAGTTCTGTAGGTGTCTGCGTCTTGTCTGTGCTTAG GATGAAAACAACACAGAACCAACGCCCCTCCTGTCAGACATGCCTCTTCT ATGCAAACAAGAAGCCTTTTGGACGCCAGGCTGGACACGTCCGTACTGGA CAGCTTGTTGTGGGGAGCGCTAATCAAACCCACATTCAGTGTCTACAACC ATTTAAAAGGAAGTGTTCGAGTTGCACCCCGAGCAAGTGGCGATCAGCGA CCACCACGACTTGGGTTGCACAACCAGGTTGTCGAAGGAAACAGTGGTTG CGCTTTCGACCGTCGTTTTCAGAAAGTAAACATAACCTCACAGAAAGACT ACCCGTTCGAGATATTACCTCAGTCGAAAGGGACGTGGTGGTGAAGTCTT TTCAGTAAGTGGATTGACCGTCGTTTTCGTTTCTATCTGTGGTGTCCACG GAGATATGCCGAAACGGAGCTCACAAGGCCTAAGCTTAAGCTTGACACCG GACACGAAGCCTTGGTAGCGTCGTCGTGCTTCTTTAGGTCATGGGAAATG GTGCGTTGGAGCACTGACTCCCCCCGGGGGTTGTGGTCCGCCTCTCAACA GCTCGAAACACTCTCGTGACGTCTTTCGAGTCATGCCTCCGTAATCCCCC CCTTGACGCACTTGTTTTCATCCCGCCTTCATCTCGACTGGGACGCACGC CCGAGGAACACCAGGGTCACACGGCAGGCAAAGAAGGACAGGCGAACATT GTTTTGGGTATACCCCCCACCCCTCCGTGTCGCGGGTCCCCCATTGTTTT GAGTACCCCACCCTTGAAACGTAGCCTGGGCTTGGCGACAACCCGGCATA TCGCGCCTTTCGGGCATTGTAGGGATTCGATGTCAATGGTCTACAGACTA CGACATGCGTTTTCATGGGAGTACCCCCCCCATCCCCCCTCCCTTCGTCC CCCTCTCTGGTTCGCAGGGACTGCAAGGTGATTGACAGCTGGGTCGGGCG GTTTCCTCAGGCGGTGACGTGTTTCAGCCCGGGGTCGTACGTCAATCGTC CCCTCCAAGCGGTGCGGGGCTCGAATGTGTTCGTCGCCGGAGACTGGGTC AAGGGGGTCGATCACGGAGCCAACGGACTCAGTCAGGTAAGGCTCTCCCT CTCCCTCCCTCCCTCTCTCTCTCTCTCTCTCTCTCTCAGCCTCTGAACGA TTTTCGGCGTTTGCATTACGCATAGGCATGTGTTGTCAGGGGAGCCCGAT GACCAGACATGCAGCCCGCTGCAAAGTGAAAGTCACCAGGCATGATCTGC TGCAACGATTACGCGTACCGCGCAGTTTCCTTGTTCTGTTGCCAGAATCT TGCTGCCCCGTCCGCTCCCTTATGGCGATCGATCACATGACAAGCACGCG AAGAACGACCTTTTCCAAAACTTTTCCCGCCCGCTGGGGCACACGCTCCG CTTTGCTCCCGCAGGAGAGGGCGTACGTGACGGGCCTGACGGCCGCCAAC CACGTCATGGATTCTTTCCCCGGAGTGGAGGCTCGAAGAACCCCTGTCCT CCAAACGGAGCCGGACGAGCCTCAGGTTCGTGATGATGGTCGCTGGTCGA TATGTGCTGTTTGGATGTTCGCGTGTGTTTTGTTTGTGGTTCGCAGGTTC GTCACGGCCGCTGTTCGATGTGTGCTGTTTGGATGTTCGTTTTGTTGAAA AGTTGGTTGTGGTTGTTGTGGGTTGCAGGTGTAAAATGTTCGATGCGTTC TGTGTGCTGGGATGTTCTTTTTGTTGTGGTAGTGGTTCCATCGCGCGACC TCCACGCCGTAGGCTGTTGGTTGTGGTTGTTGTGATGCCCGCGTCGCACG ATATCAAACGCTCATCAGAATACTCCAGCAGGTGGTAGAAGTGACAGAAG CCTTCTATGAGCAGGAGTGTGTGGCAGGTGCGAGTGAAACGCAGTCTGTG CTTTGCATCCCATTGCCCTGTGTTTCACGAAGCCTCGTCAGTTGAGTAAA TACGTCTTGCACCACCGAACCAGCGTGTTGGTGTGTTTGGGGTATTCCTT GGCACCGACCGTCGAAAACGCATCCGTCGCCTTCCGAAGAGCAGGATCGT CCACTCCACTGGAGAGTGAAAATGCCAACATTCTAGCACTCACCACGTCA TTGTACGACGAAATTTGTTGCCCACCTCATGATAATGGCTGGCCGTTTGG GGGAACAGTGAAGGGTAGAATCGTTCATACACGAAAGAAAACACACGAAT GCTGGGTCTTTTACTCCCACATGGGGCACTATACCAGAGCGATTCCCTCT GAATCCCACGGCAGCACCATAAATACGAGGAAGCTATGTACCAACCTCTG TCCATCGTCTAAAGATCTTCCTTTTCAACACGTGCTGCGCTATTCATATT TCTTGCTCAATAATCCCCGCTACGCCTTGCTATTCCTTGTCTCCGTTTCC CGACCTCAGGTTGCGGCGGGAAAGCGCGCGAACAAGAGCGTGAGGGGGGC CTTGAGGCGACTCGGGTTGCCCGACCCCATCCTCGATTTCACGGTGTTCC CCAAGTTCTTCCCGTGA
back to top

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1421:25891..32507-

>mRNA_E-siliculosus-1a_F_contig1421.2486.1 ID=mRNA_E-siliculosus-1a_F_contig1421.2486.1|Name=mRNA_E-siliculosus-1a_F_contig1421.2486.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1968bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1421:25891..32507- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GTCAGGTGGTGCACCGGTTCGGTCACCGAGAAGATCTTCGCCCCGATGGT
GGACAAGATAAAGGCACGTAGTCCCAATAATAATTCTAGCTCTTGCGTCA
GGTGGTGCACCGGTTCGGTCACCGAGAAGATCTTCGCCCCGATGGTGGAC
AAGATAAAGGCACGTAGTCCCAATAATAATTCTAGCTCTTGCGGAAACGG
CGGCGAAATCCGCGGAGGCATGTTCGTAACCGACGTGGAGGTGGGCGACG
ACAACAAGGGAAACGGCGGCGAAATCCGCGGAGGCATGTTCGTAACCGAC
GTGGAGGTGGGCGACGACAACAAGGTGACATCGGTGCTGGCGAAGAACTC
CGACGGAGAGACGGTTTCGTTCGAGGCGGATGCCGTTGTCATGTGCGTCA
GCGTCCAGGTGACATCGGTGCTGGCGAAGAACTCCGACGGAGAGACGGTT
TCGTTCGAGGCGGATGCCGTTGTCATGTGCGTCAGCGTCCAGGGCGTGAA
GAAGCTGCTCTCGTCGTGCACGGGGCTGTCGGCGGCGAGACCCGATCTCC
GGCGAGCGATGTCGCTCAGGAGCGTCGATGTCATGGCGACGCGCCTCTGG
TTCGACCGAAAGGGCGTGAAGAAGCTGCTCTCGTCGTGCACGGGGCTGTC
GGCGGCGAGACCCGATCTCCGGCGAGCGATGTCGCTCAGGAGCGTCGATG
TCATGGCGACGCGCCTCTGGTTCGACCGAAAGGTGGCTGTGAAGAACCCG
TCTAACGTGATCGCCGGCTTCGAGGACTCGGTAGGCGGGACGTTCTTCCA
CCTCAACGACATGCAGGTGGCTGTGAAGAACCCGTCTAACGTGATCGCCG
GCTTCGAGGACTCGGTAGGCGGGACGTTCTTCCACCTCAACGACATGCAG
GACGAGTACCGAGACAGCGAGGGCAGCGTGGTGGCGTCGGACTTCTACCA
CGCCTCGGAGCTGCTGCCCCTGTCCGACGAGCAGATCGTCGAGCGGGTCC
ACAAGACCTACCTTTCCACCTGCGTGCCCGAGTTCAGGCAAGAGCCGACG
AGTACCGAGACAGCGAGGGCAGCGTGGTGGCGTCGGACTTCTACCACGCC
TCGGAGCTGCTGCCCCTGTCCGACGAGCAGATCGTCGAGCGGGTCCACAA
GACCTACCTTTCCACCTGCGTGCCCGAGTTCAGGCAAGAGCCGGACTGCA
AGGTGATTGACAGCTGGGTCGGGCGGTTTCCTCAGGCGGTGACGTGTTTC
AGCCCGGGGTCGTACGTCAATCGTCCCCTCCAAGCGGTGCGGGGCTCGAA
TGTGTTCGTCGCCGGAGACTGGGTCAAGGGGGTCGATCACGGAGCCAACG
GACTCAGTCAGGGACTGCAAGGTGATTGACAGCTGGGTCGGGCGGTTTCC
TCAGGCGGTGACGTGTTTCAGCCCGGGGTCGTACGTCAATCGTCCCCTCC
AAGCGGTGCGGGGCTCGAATGTGTTCGTCGCCGGAGACTGGGTCAAGGGG
GTCGATCACGGAGCCAACGGACTCAGTCAGGAGAGGGCGTACGTGACGGG
CCTGACGGCCGCCAACCACGTCATGGATTCTTTCCCCGGAGTGGAGGCTC
GAAGAACCCCTGTCCTCCAAACGGAGCCGGACGAGCCTCAGGAGAGGGCG
TACGTGACGGGCCTGACGGCCGCCAACCACGTCATGGATTCTTTCCCCGG
AGTGGAGGCTCGAAGAACCCCTGTCCTCCAAACGGAGCCGGACGAGCCTC
AGGTTGCGGCGGGAAAGCGCGCGAACAAGAGCGTGAGGGGGGCCTTGAGG
CGACTCGGGTTGCCCGACCCCATCCTCGATTTCACGGTGTTCCCCAAGTT
CTTCCCGTGAGTTGCGGCGGGAAAGCGCGCGAACAAGAGCGTGAGGGGGG
CCTTGAGGCGACTCGGGTTGCCCGACCCCATCCTCGATTTCACGGTGTTC
CCCAAGTTCTTCCCGTGA
back to top