mRNA_E-siliculosus-1a_F_contig1418.2471.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1418.2471.1 vs. uniprot
Match: A0A6H5L6W1_9PHAE (Sulfatase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L6W1_9PHAE) HSP 1 Score: 427 bits (1098), Expect = 9.580e-145 Identity = 197/217 (90.78%), Postives = 208/217 (95.85%), Query Frame = 1
Query: 1 VPAFVYSTSHIPEARRGSEYDGLMYVTDWLPTLAAGAGLKLSGSAGPLDGVNQWEHIVGSAAAVDGGRPRTELLFNYDPYRLLPNSNQVYDTGYAQGAFRSGKYKMMFNVSCQGWYTFDGDMLEEDPLTDLSKVCGGTCNDEGKCSDETTSDYLFDLDQDPRESNNLVDKLPDVAQEMRDRWYEVTFREYTDTVYEPLDLRAYDVWTENNWWMIPWL 651
VPAFVYSTSHIPEARRGSEYDGLM+VTDWLPTLAAGAGL+LSGSAGPLDGVN WEHIVGSA AVDG RPRTELL+NYDPYRLLPNSNQVYDTG+AQGAFRSGKYKM+FNVSC GWYTFDGD+LE D LT+LSKVCGGTCND G+CSDETTSDYLFDLDQDPRESNNLVD LPDVAQEMRDRWYEVTFREY+DTVYEPLDL+AYDVW +NNWWMIPWL
Sbjct: 417 VPAFVYSTSHIPEARRGSEYDGLMHVTDWLPTLAAGAGLELSGSAGPLDGVNHWEHIVGSATAVDGDRPRTELLYNYDPYRLLPNSNQVYDTGHAQGAFRSGKYKMIFNVSCHGWYTFDGDILEADHLTNLSKVCGGTCNDGGECSDETTSDYLFDLDQDPRESNNLVDDLPDVAQEMRDRWYEVTFREYSDTVYEPLDLKAYDVWADNNWWMIPWL 633
BLAST of mRNA_E-siliculosus-1a_F_contig1418.2471.1 vs. uniprot
Match: A0A6H5JIE9_9PHAE (Sulfatase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JIE9_9PHAE) HSP 1 Score: 251 bits (641), Expect = 1.410e-75 Identity = 123/233 (52.79%), Postives = 161/233 (69.10%), Query Frame = 1
Query: 1 VPAFVYSTSHIPEARRGSEYDGLMYVTDWLPTLAAGAGLKLSGSAGPLDGVNQWEHIVGSAAAVDGGRPRTELLFNYDPYRL-LPNSNQVYDTGY--AQGAFRSGKYKMMFNVSCQGWYTFDGDMLEEDPLTDLSKVCGGT-CNDEGK-CSDETTSDYLFDLDQDPRESNNLVDKLPDVAQEMRDRWYEVTFREYTDTVYEPLDLRAYDVWTENNWWMIPWLTSSRQRSPEDS 684
VP+FVYS SHIPE R G+EYDGLM+VTDWLPT+A A L L G AGP DGV+QW I AA + G R E+++N+DPY L + +S + D + AQGAFRSGKYK + NV C GWYTFD +L EDPLT+L+ C G+ C+D G+ C+ ++DYLFDL+ DPRE +NL+ LPDVA MR+RW EV F E+ ++ YE +D ++Y VW NWWM+PW +P+ +
Sbjct: 487 VPSFVYSKSHIPEERWGTEYDGLMHVTDWLPTIAGAAELDLDGGAGPFDGVDQWPLITSVAAEAEFGSARDEMVYNFDPYILWIDSSESIGDPEFNLAQGAFRSGKYKYLANVWCTGWYTFDKHILAEDPLTNLTLACDGSPCSDCGQGCTSYNSTDYLFDLEADPREEHNLIYDLPDVAHNMRERWVEVAFIEWGNSSYENIDHQSYSVWASFNWWMVPWWHLVGSSAPDST 719
BLAST of mRNA_E-siliculosus-1a_F_contig1418.2471.1 vs. uniprot
Match: A0A6H5K4V1_9PHAE (Sulfatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4V1_9PHAE) HSP 1 Score: 186 bits (473), Expect = 3.440e-51 Identity = 101/229 (44.10%), Postives = 137/229 (59.83%), Query Frame = 1
Query: 1 VPAFVYSTSHIPEARRGSEYDGLMYVTDWLPTLAAGAGLKLSGSAGPLDGVNQWEHI----VGSAAAVDGGR-PRTELLFNYDPYRLLPNSNQVYDTGYAQGAFRSGKYKMMFNVSCQGWYTFDGDMLEEDPLTDLSKVCGG---TCND-----EGKCSDETTSDYLFDLDQDPRESNNLVDKLPDVAQEMRDRWYEVTFREYTDTVYEPLDLRAYDVWTENNWWMIPW 648
VPAFV+S SH+P G+ YD L++ TDWLPTLA AG SGSAG LDGV+QWE + VG A D + PRTELL+N+D Y L D G +QGAFRSG +K++ N C G+Y+ D ++E D L D CG C D + D SD L+++ DPRE ++L D+ P++A+E+R R EV F ++ + +P++ +Y VW NNWWM PW
Sbjct: 516 VPAFVWSKSHLPSHAWGTTYDNLVHSTDWLPTLANIAGGATSGSAGALDGVDQWECLKSNGVGGAGPGDTSKAPRTELLYNWDSYLLASVEELKEDLGLSQGAFRSGDWKLLVNAFCSGYYSHDLAVIESDHLLDSEVSCGVGNMECQDCIDLCQLGSEDYPVSDLLYNVKDDPREEHDLYDQYPEIAKELRKRAEEVVFADWVGSRLKPVNTDSYPVWEANNWWMCPW 744
BLAST of mRNA_E-siliculosus-1a_F_contig1418.2471.1 vs. uniprot
Match: D7G1A6_ECTSI (Formylglycine-dependent sulfatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1A6_ECTSI) HSP 1 Score: 182 bits (462), Expect = 8.980e-50 Identity = 111/275 (40.36%), Postives = 145/275 (52.73%), Query Frame = 1
Query: 1 VPAFVYSTSHIPEARRGSEYDGLMYVTDWLPTLAAGAGLKLSGSAGPLDGVNQWEHIVGS--------------AAAVDGGR-----------------------------------PRTELLFNYDPYRLLPNSNQVYDTGYA-----QGAFRSGKYKMMFNVSCQGWYTFDGDMLEEDPLTDLSKVCG--GTCNDEGKCSDETTSDY---LFDLDQDPRESNNLVDKLPDVAQEMRDRWYEVTFREYTDTVYEPLDLRAYDVWTENNWWMIPW 648
VPAFVYS SHIPE G+EY GLM+VTDWLPTLA A +L GS G LDGV+ W+HIV + AAAV+ R R E+L+N+DPY L +N D G A QGAFR GK+K MFN C G+Y FD L D LTD C G C+ G + DY LFDL+ DPRE NNL ++ P+V + +R R EV F+E++++ Y+ ++ AY +W + ++WM+PW
Sbjct: 437 VPAFVYSPSHIPEEHWGTEYRGLMHVTDWLPTLADAANFELLGSHGDLDGVSHWKHIVPAPGDDTATVSESPEAAAAVEDNRLKRARTATXXXXXXXXXXXXXXXXSSYGLGEVSYGARREVLYNFDPYVL--GANITDDIGEADFTEVQGAFRQGKWKFMFNSWCSGYYAFDNKTLLADDLTDEDNTCQELGECSQCGANCGSLSIDYTDWLFDLEDDPRELNNLANEHPEVVESLRRRVLEVVFQEFSNSSYKSVNYGAYYIWRKFDYWMVPW 709
BLAST of mRNA_E-siliculosus-1a_F_contig1418.2471.1 vs. uniprot
Match: A0A6H5K238_9PHAE (Sulfatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K238_9PHAE) HSP 1 Score: 135 bits (341), Expect = 3.370e-35 Identity = 92/236 (38.98%), Postives = 112/236 (47.46%), Query Frame = 1
Query: 1 VPAFVYSTSHIPEARRGSEYDGLMYVTDWLPTLAAGAGLKLSGSAGPLDGVNQWEHIV---GSAAAVDGGRP-------------------------------------------------RTELLFNYDPYRLLPNSNQVYDTGYA-----QGAFRSGKYKMMFNVSCQGWYTFDGDMLEEDPLTDLSKVCG--GTCNDEGKCSDETTSDY---LFDLDQDPRESNNLVDKLPDV 522
VPAFVYS SHIP+ G+EY GLM+VTDWLPTLA A +L GS G LDGV+ W+HIV G A P R+E+L+N DPY L ++ D G A QGAFR GK+K MF C G+Y FD + L D LTD C G C+ G + DY LFDL+ DPRE NNL ++ P+V
Sbjct: 58 VPAFVYSPSHIPDENWGTEYRGLMHVTDWLPTLADAANFELLGSHGDLDGVSHWKHIVHAPGDDTATVSESPEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSYGLGEVSYGARSEVLYNSDPYVL--GASITADIGDADFTEVQGAFRQGKWKFMFKSWCSGYYAFDNNTLLADDLTDEDNTCQELGECSQCGANCENLGIDYTDWLFDLEDDPRELNNLANEHPEV 291
BLAST of mRNA_E-siliculosus-1a_F_contig1418.2471.1 vs. uniprot
Match: A0A6H5KZF8_9PHAE (Sulfatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZF8_9PHAE) HSP 1 Score: 122 bits (307), Expect = 1.880e-30 Identity = 78/222 (35.14%), Postives = 109/222 (49.10%), Query Frame = 1
Query: 1 VPAFVYSTSH--IPEARRGSEYDGLMYVTDWLPTLAAGA-GLKLSGSAGPLDGVNQWEHIVGSAAAVDGGRPRTELLFNYDPYRLLPNSNQVYDTGYAQGAFRSGKYKMMFNVSCQGWYTFDGD--MLEEDPLTDLSKVCGGTCNDEGKCSDETTSDYLFDLDQDPRESNNLVDKLPDVAQEMRDRWYEVTFREYTDTVYEPLDLRAYDVWTENNWWMIPWL 651
VPAFVYS S IP RG++Y G+M+ TDW PTL L L L G +QW+ I+G +GG RTEL+ Y + ++ + +GA+ +K++ C GW TF D ++ E P DL C D C D+LF +D DP E+ NL D +P+ EM R +EV + Y+P +A + W E N WM+ WL
Sbjct: 52 VPAFVYSKSADLIPAEARGTKYSGMMHSTDWTPTLGRVVPDLPLGEMGKELSGFDQWDAIIGGGKG-EGGGVRTELVLGRSSYVFDLDVGEIVNNPSPRGAYIYDGWKIILLERCTGWSTFSQDDPVISEYPGCDLEDACTSCTVD---CGGPELIDFLFHIDTDPYETENLRDSMPEKFAEMVQR-FEVATTDEVVAEYKPAQPQALERWDEYNHWMVAWL 268
BLAST of mRNA_E-siliculosus-1a_F_contig1418.2471.1 vs. uniprot
Match: A0A6H5JFF9_9PHAE (Sulfatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFF9_9PHAE) HSP 1 Score: 127 bits (319), Expect = 4.780e-30 Identity = 71/167 (42.51%), Postives = 91/167 (54.49%), Query Frame = 1
Query: 1 VPAFVYSTSHIPEARRGSEYDGLMYVTDWLPTLAAGAGLKLSGSAGPLDGVNQWEHIV---GSAAAVDGGR----------PRTELLFNYDPY-------RLLPNSNQVYDTGYAQGAFRSGKYKMMFNVSCQGWYTFDGDMLEEDPLTDLSKVCGGTCNDEGKCSD 441
VPA VYS SHIPE RRG +YDGLM+VTDWLPTL A G + S LDGVN WEHI+ + +GG PR E+L+N+DPY R LP+ D AQGAFR G++K++F V C G Y + D + + S C +D + +D
Sbjct: 453 VPALVYSPSHIPEERRGGQYDGLMHVTDWLPTLTAATGSSVVESHRNLDGVNHWEHIIDVDSAGCGAEGGSSSRGSNSSYSPRNEMLYNFDPYFMGAERDRPLPDP----DISRAQGAFRQGQWKLLFKVCCLGHYALETDTSFANKMVSKSGTCRHHAHDNQQSAD 615
BLAST of mRNA_E-siliculosus-1a_F_contig1418.2471.1 vs. uniprot
Match: D8LRL9_ECTSI (Formylglycine-dependent sulfatase, C-terminal Formylglycine-dependent sulfatase, N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRL9_ECTSI) HSP 1 Score: 122 bits (307), Expect = 1.580e-28 Identity = 71/164 (43.29%), Postives = 91/164 (55.49%), Query Frame = 1
Query: 1 VPAFVYSTSHIPEARRGSEYDGLMYVTDWLPTLAAGAGLKLSGSAGPLDGVNQWEHIVGSAAAVDGGR--------PRTELLFNYDPYRL-------LPNSNQVYDTGYAQGAFRSGKYKMMFNVSCQGWYTFDGDMLEEDPLTDLSKVCGGTCNDEGKCSDET 447
VPA VYS SHIP+ RRG +YDGLM+VTDWLPTL A G + S LDGVN WEHI+ +A G PR E+L+N+DPY + LP+ D AQGAFR GK+K +F V C G Y + D+ + + S C +D + +D T
Sbjct: 361 VPALVYSPSHIPKERRGGQYDGLMHVTDWLPTLMAATGSVVE-SHRNLDGVNHWEHIIDVDSAGCGAECGSSSSYSPRNEMLYNFDPYFMGAETYGPLPDP----DFSQAQGAFRQGKWKFLFKVCCLGHYAPETDVSFANKMVSESGTCRHHAHDNEQSADAT 519
BLAST of mRNA_E-siliculosus-1a_F_contig1418.2471.1 vs. uniprot
Match: D7FLS1_ECTSI (Formylglycine-dependent sulfatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLS1_ECTSI) HSP 1 Score: 117 bits (293), Expect = 1.230e-26 Identity = 79/222 (35.59%), Postives = 107/222 (48.20%), Query Frame = 1
Query: 1 VPAFVYS--TSHIPEARRGSEYDGLMYVTDWLPTLAAGA-GLKLSGSAGPLDGVNQWEHIVGSAAAVDGGRPRTELLFNYDPYRLLPNSNQVYDTGYAQGAFRSGKYKMMFNVSCQGWYTF--DGDMLEEDPLTDLSKVCGGTCNDEGKCSDETTSDYLFDLDQDPRESNNLVDKLPDVAQEMRDRWYEVTFREYTDTVYEPLDLRAYDVWTENNWWMIPWL 651
VPAFVYS T IPE RG+ Y G+M+ TDW PT + L L L G + W+ I+G +GG RTEL+ L S+ V+D + ++ N C GW TF D ++ EDP DL C D C D+LF +D DP E+ NL D +P+ EM R +EV+ + Y+P +A + W E N WM+ WL
Sbjct: 417 VPAFVYSKSTDLIPEEARGTRYSGMMHSTDWTPTFGSVVPDLPLGEMGKELSGFDHWDAIIGGGEG-EGGGVRTELV--------LGRSSYVFDLDAGE---------IVNNPRCTGWSTFSLDDPVISEDPGCDLEDACTSCTVD---CGGPELIDFLFHIDTDPYETENLRDSMPEKYAEMVQR-FEVSTNDEVVAEYKPAQPQALERWDEFNHWMVAWL 616
BLAST of mRNA_E-siliculosus-1a_F_contig1418.2471.1 vs. uniprot
Match: A0A7S2AVP3_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2AVP3_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 1.730e-21 Identity = 65/233 (27.90%), Postives = 116/233 (49.79%), Query Frame = 1
Query: 31 IPEARRGSEYDGLMYVTDWLPTLAAGAGLKLSGSAGPLDGVNQWEHIVGSAAAVDGGRPRTELLFNYDPYRLLP------NSNQVYDTGYAQGAFRSGKYKMMFNVSCQGWYTFDGDMLEEDPLTDLSKV--CG-GTCNDEGKCSDETTSDYLFDLDQDPRESNNLVDKLPDVAQEMRDRWYEVTFREYTDTVYEP----LDLRAYDVWTENNWWMIPWLTSSRQRSPEDSIH 690
+P +GS Y+G+M+++DW+PT+ + AG+ + +DG++ W+ + VD PRTE L+N DPY + N + + A R G +K++ N C ++ PL DL + CG +C G D +++++LF+L DP E N++D+ PD+A++M + +Y + EP D AY VW + + + PW+ + E +++
Sbjct: 13 LPTEVQGSSYEGMMHISDWMPTILSAAGI--TDLPEDIDGIDHWDALT----TVDAQSPRTEFLYNIDPYYSTMVHMDDGSINTMLTRVKPRAALRVGDWKLLLNEYCVSYFN---------PLEDLGRPEGCGQDSCATPG--IDVSSTNFLFNLITDPYEETNVIDEYPDIAKKMM-----LKIDDYMQDMVEPHFRGTDAIAYSVWARSGF-ITPWVHTETPLEGESTLN 222 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1418.2471.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1418.2471.1 >prot_E-siliculosus-1a_F_contig1418.2471.1 ID=prot_E-siliculosus-1a_F_contig1418.2471.1|Name=mRNA_E-siliculosus-1a_F_contig1418.2471.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=231bp VPAFVYSTSHIPEARRGSEYDGLMYVTDWLPTLAAGAGLKLSGSAGPLDGback to top mRNA from alignment at E-siliculosus-1a_F_contig1418:22653..26672+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1418.2471.1 ID=mRNA_E-siliculosus-1a_F_contig1418.2471.1|Name=mRNA_E-siliculosus-1a_F_contig1418.2471.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=4020bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1418:22653..26672+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1418:22653..26672+ >mRNA_E-siliculosus-1a_F_contig1418.2471.1 ID=mRNA_E-siliculosus-1a_F_contig1418.2471.1|Name=mRNA_E-siliculosus-1a_F_contig1418.2471.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1386bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1418:22653..26672+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |