mRNA_E-siliculosus-1a_F_contig14175.2467.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig14175.2467.1
Unique NamemRNA_E-siliculosus-1a_F_contig14175.2467.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig14175.2467.1 vs. uniprot
Match: A0A455V6V9_9GAMM (Uncharacterized protein n=1 Tax=Halomonas axialensis TaxID=115555 RepID=A0A455V6V9_9GAMM)

HSP 1 Score: 492 bits (1267), Expect = 6.180e-174
Identity = 239/254 (94.09%), Postives = 249/254 (98.03%), Query Frame = 1 
Query:    1 AMAVLREQGVNGQVEMAWAFDKAGFEAVDVHMSDILEGRVSLEEFKGLVACGGFSYGDVLGAGGGWAKSVLFNERAREQFAAFFNREDSFSLGVCNGCQMLSQLKSLIPGAENWPTFLRNESEQFEARVSMVRVEKSPSILLAGMEGSQLPIAVAHGEGRAEFRDSAHLRSMQSSSQIAMRYIDNYGQATTRYPANPNGSPSGITGLTTPDGRVTIMMPHPERVARAVTNSWRPAEWTENGAWLRLFRNARVWL 762
            A+AVLREQGVNGQVEMAWAF KAGF+AVDVHMSDILEGRVSLEEFKGLVACGGFSYGDVLGAGGGWAKSVLFNERAREQF AFFNR+DSFSLGVCNGCQMLSQLK+LIPGAENWP F+RNESEQFEARVSMVRVEKSPSILLAGMEGS+LPIAVAHGEGRAEFRD+AHLRSMQSSSQIA+RYIDNYGQ TTRYPANPNGSPSGITGLTTPDGRVTIMMPHPERV RAVTNSWRPA+WTE+GAWLRLFRNARVWL
Sbjct:  112 AVAVLREQGVNGQVEMAWAFHKAGFDAVDVHMSDILEGRVSLEEFKGLVACGGFSYGDVLGAGGGWAKSVLFNERAREQFEAFFNRDDSFSLGVCNGCQMLSQLKTLIPGAENWPAFVRNESEQFEARVSMVRVEKSPSILLAGMEGSKLPIAVAHGEGRAEFRDTAHLRSMQSSSQIALRYIDNYGQVTTRYPANPNGSPSGITGLTTPDGRVTIMMPHPERVTRAVTNSWRPAKWTEDGAWLRLFRNARVWL 365
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BLAST of mRNA_E-siliculosus-1a_F_contig14175.2467.1 vs. uniprot
Match: A0A354XIJ5_HALSX (Phosphoribosylformylglycinamidine synthase (Fragment) n=1 Tax=Halomonas sp. TaxID=1486246 RepID=A0A354XIJ5_HALSX)

HSP 1 Score: 494 bits (1271), Expect = 2.620e-166
Identity = 240/254 (94.49%), Postives = 249/254 (98.03%), Query Frame = 1 
Query:    1 AMAVLREQGVNGQVEMAWAFDKAGFEAVDVHMSDILEGRVSLEEFKGLVACGGFSYGDVLGAGGGWAKSVLFNERAREQFAAFFNREDSFSLGVCNGCQMLSQLKSLIPGAENWPTFLRNESEQFEARVSMVRVEKSPSILLAGMEGSQLPIAVAHGEGRAEFRDSAHLRSMQSSSQIAMRYIDNYGQATTRYPANPNGSPSGITGLTTPDGRVTIMMPHPERVARAVTNSWRPAEWTENGAWLRLFRNARVWL 762
            A+AVLREQGVNGQVEMAWAF KAGF+AVDVHMSDILEGRVSLEEFKGLVACGGFSYGDVLGAGGGWAKSVLFNERAREQF AFFNR+DSFSLGVCNGCQMLSQLK+LIPGAENWP F+RNESEQFEARVSMVRVEKSPSILLAGMEGS+LPIAVAHGEGRAEFRD+AHLRSMQSSSQIA+RYIDNYGQ TTRYPANPNGSPSGITGLTTPDGRVTIMMPHPERV RAVTNSWRPAEWTE+GAWLRLFRNARVWL
Sbjct:  719 AVAVLREQGVNGQVEMAWAFHKAGFDAVDVHMSDILEGRVSLEEFKGLVACGGFSYGDVLGAGGGWAKSVLFNERAREQFEAFFNRDDSFSLGVCNGCQMLSQLKTLIPGAENWPAFVRNESEQFEARVSMVRVEKSPSILLAGMEGSKLPIAVAHGEGRAEFRDTAHLRSMQSSSQIALRYIDNYGQVTTRYPANPNGSPSGITGLTTPDGRVTIMMPHPERVTRAVTNSWRPAEWTEDGAWLRLFRNARVWL 972
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BLAST of mRNA_E-siliculosus-1a_F_contig14175.2467.1 vs. uniprot
Match: A0A0D6E608_9GAMM (Phosphoribosylformylglycinamidine synthase n=49 Tax=root TaxID=1 RepID=A0A0D6E608_9GAMM)

HSP 1 Score: 494 bits (1273), Expect = 3.790e-163
Identity = 241/255 (94.51%), Postives = 250/255 (98.04%), Query Frame = 1 
Query:    1 AMAVLREQGVNGQVEMAWAFDKAGFEAVDVHMSDILEGRVSLEEFKGLVACGGFSYGDVLGAGGGWAKSVLFNERAREQFAAFFNREDSFSLGVCNGCQMLSQLKSLIPGAENWPTFLRNESEQFEARVSMVRVEKSPSILLAGMEGSQLPIAVAHGEGRAEFRDSAHLRSMQSSSQIAMRYIDNYGQATTRYPANPNGSPSGITGLTTPDGRVTIMMPHPERVARAVTNSWRPAEWTENGAWLRLFRNARVWLN 765
            AMAVLREQGVNGQVEMAWAFDKAGFEAVDVHMSDILEGRVSLEEFKGLVACGGFSYGDVLGAGGGWAKSVLFNERAREQFAAFF R+DSFSLGVCNGCQMLSQLK+LIPGAENWPTF+RNESEQFEAR SMVRVEKSPSILLAGMEG +LPIAVAHGEG+A FRDSAHLRSMQSSSQIA+RYIDNYGQATTRYPANPNGSP+GITGLTTPDGRVTIMMPHPERVARA+TNSWRPA WTE+GAWLRLFRNARVWLN
Sbjct: 1061 AMAVLREQGVNGQVEMAWAFDKAGFEAVDVHMSDILEGRVSLEEFKGLVACGGFSYGDVLGAGGGWAKSVLFNERAREQFAAFFARDDSFSLGVCNGCQMLSQLKTLIPGAENWPTFVRNESEQFEARXSMVRVEKSPSILLAGMEGXKLPIAVAHGEGQAAFRDSAHLRSMQSSSQIALRYIDNYGQATTRYPANPNGSPAGITGLTTPDGRVTIMMPHPERVARAITNSWRPAGWTEDGAWLRLFRNARVWLN 1315
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BLAST of mRNA_E-siliculosus-1a_F_contig14175.2467.1 vs. uniprot
Match: A0A7G7ZBA3_9GAMM (Phosphoribosylformylglycinamidine synthase n=5 Tax=Halomonas TaxID=2745 RepID=A0A7G7ZBA3_9GAMM)

HSP 1 Score: 491 bits (1264), Expect = 7.420e-162
Identity = 237/254 (93.31%), Postives = 250/254 (98.43%), Query Frame = 1 
Query:    1 AMAVLREQGVNGQVEMAWAFDKAGFEAVDVHMSDILEGRVSLEEFKGLVACGGFSYGDVLGAGGGWAKSVLFNERAREQFAAFFNREDSFSLGVCNGCQMLSQLKSLIPGAENWPTFLRNESEQFEARVSMVRVEKSPSILLAGMEGSQLPIAVAHGEGRAEFRDSAHLRSMQSSSQIAMRYIDNYGQATTRYPANPNGSPSGITGLTTPDGRVTIMMPHPERVARAVTNSWRPAEWTENGAWLRLFRNARVWL 762
            AMAVLREQGVNGQVEMAWAFDKAGF+AVDVHMSDILEGRVSL++FKGLVACGGFSYGDVLGAGGGWAKSVLFNERAREQFAAFF R+DSFSLGVCNGCQMLSQL+SLIPGAE+WPTF+RNESEQFEAR+SMVRVEKSPSILLAGMEGSQLPIAVAHGEG+A FRDSAHLR MQSSSQ+A+RYIDNYGQATTRYPANPNGSPSGITGLTTPDGRVTIMMPHPERVARAVTNSWRP+EWTE+GAWLRLFRNAR WL
Sbjct: 1057 AMAVLREQGVNGQVEMAWAFDKAGFDAVDVHMSDILEGRVSLDDFKGLVACGGFSYGDVLGAGGGWAKSVLFNERAREQFAAFFKRDDSFSLGVCNGCQMLSQLRSLIPGAEDWPTFVRNESEQFEARLSMVRVEKSPSILLAGMEGSQLPIAVAHGEGQAAFRDSAHLRRMQSSSQVALRYIDNYGQATTRYPANPNGSPSGITGLTTPDGRVTIMMPHPERVARAVTNSWRPSEWTEDGAWLRLFRNARAWL 1310
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BLAST of mRNA_E-siliculosus-1a_F_contig14175.2467.1 vs. uniprot
Match: A0A1H9SHR3_9GAMM (Phosphoribosylformylglycinamidine synthase n=5 Tax=Halomonas TaxID=2745 RepID=A0A1H9SHR3_9GAMM)

HSP 1 Score: 489 bits (1260), Expect = 2.880e-161
Identity = 236/254 (92.91%), Postives = 250/254 (98.43%), Query Frame = 1 
Query:    1 AMAVLREQGVNGQVEMAWAFDKAGFEAVDVHMSDILEGRVSLEEFKGLVACGGFSYGDVLGAGGGWAKSVLFNERAREQFAAFFNREDSFSLGVCNGCQMLSQLKSLIPGAENWPTFLRNESEQFEARVSMVRVEKSPSILLAGMEGSQLPIAVAHGEGRAEFRDSAHLRSMQSSSQIAMRYIDNYGQATTRYPANPNGSPSGITGLTTPDGRVTIMMPHPERVARAVTNSWRPAEWTENGAWLRLFRNARVWL 762
            AMAVLREQGVNGQVEMAWAFDKAGF+AVDVHMSDILEGRVSL++FKGLVACGGFSYGDVLGAGGGWAKSVLFNERAREQFAAFF R+DSFSLGVCNGCQMLSQL++LIPGAE+WPTF+RNESEQFEAR+SMVRVEKSPSILLAGMEGSQLPIAVAHGEG+A FRDSAHLR MQSSSQ+A+RYIDNYGQATTRYPANPNGSPSGITGLTTPDGRVTIMMPHPERVARAVTNSWRP+EWTE+GAWLRLFRNAR WL
Sbjct: 1057 AMAVLREQGVNGQVEMAWAFDKAGFDAVDVHMSDILEGRVSLDDFKGLVACGGFSYGDVLGAGGGWAKSVLFNERAREQFAAFFKRDDSFSLGVCNGCQMLSQLQTLIPGAEDWPTFVRNESEQFEARLSMVRVEKSPSILLAGMEGSQLPIAVAHGEGQAAFRDSAHLRRMQSSSQVALRYIDNYGQATTRYPANPNGSPSGITGLTTPDGRVTIMMPHPERVARAVTNSWRPSEWTEDGAWLRLFRNARAWL 1310
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BLAST of mRNA_E-siliculosus-1a_F_contig14175.2467.1 vs. uniprot
Match: A0A3T1DX24_9GAMM (Uncharacterized protein n=1 Tax=Halomonas olivaria TaxID=390919 RepID=A0A3T1DX24_9GAMM)

HSP 1 Score: 455 bits (1170), Expect = 3.270e-161
Identity = 225/235 (95.74%), Postives = 230/235 (97.87%), Query Frame = 1 
Query:    4 MAVLREQGVNGQVEMAWAFDKAGFEAVDVHMSDILEGRVSLEEFKGLVACGGFSYGDVLGAGGGWAKSVLFNERAREQFAAFFNREDSFSLGVCNGCQMLSQLKSLIPGAENWPTFLRNESEQFEARVSMVRVEKSPSILLAGMEGSQLPIAVAHGEGRAEFRDSAHLRSMQSSSQIAMRYIDNYGQATTRYPANPNGSPSGITGLTTPDGRVTIMMPHPERVARAVTNSWRPAE 708
            MAVLREQGVNGQVEMAWAFDKAGF+AVDVHMSDILEGRVSLE FKGLVACGGFSYGDVLGAGGGWAKSVLFNERAR QFAAFF REDSFSLGVCNGCQMLSQLKSLIPGAENWPTF+RNESEQFEARVSMVRVEKSPSILLAGMEGSQLPIAVAHGEG+A FRDSAHLRSMQSSSQIA+RYIDNYGQATTRYPANPNGSP+GITGLTTPDGRVTIMMPHPERVARAVTNSWRP E
Sbjct:    1 MAVLREQGVNGQVEMAWAFDKAGFDAVDVHMSDILEGRVSLEAFKGLVACGGFSYGDVLGAGGGWAKSVLFNERARAQFAAFFAREDSFSLGVCNGCQMLSQLKSLIPGAENWPTFVRNESEQFEARVSMVRVEKSPSILLAGMEGSQLPIAVAHGEGQAAFRDSAHLRSMQSSSQIALRYIDNYGQATTRYPANPNGSPAGITGLTTPDGRVTIMMPHPERVARAVTNSWRPTE 235
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BLAST of mRNA_E-siliculosus-1a_F_contig14175.2467.1 vs. uniprot
Match: A0A1U9RGG2_9GAMM (Phosphoribosylformylglycinamidine synthase n=2 Tax=Halomonas TaxID=2745 RepID=A0A1U9RGG2_9GAMM)

HSP 1 Score: 489 bits (1258), Expect = 5.350e-161
Identity = 236/255 (92.55%), Postives = 249/255 (97.65%), Query Frame = 1 
Query:    1 AMAVLREQGVNGQVEMAWAFDKAGFEAVDVHMSDILEGRVSLEEFKGLVACGGFSYGDVLGAGGGWAKSVLFNERAREQFAAFFNREDSFSLGVCNGCQMLSQLKSLIPGAENWPTFLRNESEQFEARVSMVRVEKSPSILLAGMEGSQLPIAVAHGEGRAEFRDSAHLRSMQSSSQIAMRYIDNYGQATTRYPANPNGSPSGITGLTTPDGRVTIMMPHPERVARAVTNSWRPAEWTENGAWLRLFRNARVWLN 765
            A+AVLREQGVNGQVEMAWAF KAGF+AVDVHMSDILEGRVSL+EFKGLVACGGFSYGDVLGAGGGWAKSVLFNERAREQFA+FF R+DSFSLGVCNGCQMLSQLKSLIPGAENWP F+RNESEQFEARV+MVRVEKSPSILLAGMEGS+LPIAVAHGEGRAEFRD+AHLRSMQS+SQIA+RYIDNYGQ TTRYPANPNGSPSGITGLTTPDGRVTIMMPHPERV RAVTNSWRP EWTE+GAWLRLFRNARVWL+
Sbjct: 1054 AVAVLREQGVNGQVEMAWAFHKAGFDAVDVHMSDILEGRVSLDEFKGLVACGGFSYGDVLGAGGGWAKSVLFNERAREQFASFFTRDDSFSLGVCNGCQMLSQLKSLIPGAENWPAFVRNESEQFEARVAMVRVEKSPSILLAGMEGSKLPIAVAHGEGRAEFRDTAHLRSMQSNSQIALRYIDNYGQVTTRYPANPNGSPSGITGLTTPDGRVTIMMPHPERVTRAVTNSWRPTEWTEDGAWLRLFRNARVWLD 1308
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BLAST of mRNA_E-siliculosus-1a_F_contig14175.2467.1 vs. uniprot
Match: UPI0017883B65 (phosphoribosylformylglycinamidine synthase n=3 Tax=Halomonas TaxID=2745 RepID=UPI0017883B65)

HSP 1 Score: 488 bits (1257), Expect = 7.990e-161
Identity = 234/254 (92.13%), Postives = 249/254 (98.03%), Query Frame = 1 
Query:    1 AMAVLREQGVNGQVEMAWAFDKAGFEAVDVHMSDILEGRVSLEEFKGLVACGGFSYGDVLGAGGGWAKSVLFNERAREQFAAFFNREDSFSLGVCNGCQMLSQLKSLIPGAENWPTFLRNESEQFEARVSMVRVEKSPSILLAGMEGSQLPIAVAHGEGRAEFRDSAHLRSMQSSSQIAMRYIDNYGQATTRYPANPNGSPSGITGLTTPDGRVTIMMPHPERVARAVTNSWRPAEWTENGAWLRLFRNARVWL 762
            A+AVLREQGVNGQVEM WAFDKAGF+AVDVHMSDILEGRVSL+EFKGLVACGGFSYGDVLGAGGGWAKSVLFNERAR+QF AFF R+DSFSLGVCNGCQMLSQLKSLIPGAENWP+F+RNESEQFEARV+M+RVEK+PSILLAGMEGSQLPIAVAHGEGRAEFRD+AHLRSMQSSSQIA+RYIDNYGQ TTRYPANPNGSPSGITGLTTPDGRVTIMMPHPERV RAVTNSWRPAEWTE+GAWLR+FRNARVW+
Sbjct: 1057 AVAVLREQGVNGQVEMGWAFDKAGFDAVDVHMSDILEGRVSLDEFKGLVACGGFSYGDVLGAGGGWAKSVLFNERARDQFEAFFTRDDSFSLGVCNGCQMLSQLKSLIPGAENWPSFMRNESEQFEARVAMLRVEKTPSILLAGMEGSQLPIAVAHGEGRAEFRDTAHLRSMQSSSQIALRYIDNYGQVTTRYPANPNGSPSGITGLTTPDGRVTIMMPHPERVTRAVTNSWRPAEWTEDGAWLRMFRNARVWV 1310
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BLAST of mRNA_E-siliculosus-1a_F_contig14175.2467.1 vs. uniprot
Match: A0A6M1SD64_HALSX (Phosphoribosylformylglycinamidine synthase n=12 Tax=Halomonadaceae TaxID=28256 RepID=A0A6M1SD64_HALSX)

HSP 1 Score: 487 bits (1253), Expect = 2.920e-160
Identity = 236/254 (92.91%), Postives = 248/254 (97.64%), Query Frame = 1 
Query:    1 AMAVLREQGVNGQVEMAWAFDKAGFEAVDVHMSDILEGRVSLEEFKGLVACGGFSYGDVLGAGGGWAKSVLFNERAREQFAAFFNREDSFSLGVCNGCQMLSQLKSLIPGAENWPTFLRNESEQFEARVSMVRVEKSPSILLAGMEGSQLPIAVAHGEGRAEFRDSAHLRSMQSSSQIAMRYIDNYGQATTRYPANPNGSPSGITGLTTPDGRVTIMMPHPERVARAVTNSWRPAEWTENGAWLRLFRNARVWL 762
            A+AVLREQGVNGQVEMAWAF KAGF+AVDVHMSDILEGRVSL+ F+GLVACGGFSYGDVLGAGGGWAKSVLFNERAREQFAAFF R+DSFSLGVCNGCQMLSQLK+LIPGAENWP+F+RNESEQFEARV+MVRVEKSPSILLAGMEGS LPIAVAHGEGRAEFRD+AHLRSMQSSSQIA+RYIDNYGQ TTRYPANPNGSPSGITGLTTPDGRVTIMMPHPERV RAVTNSWRPAEWTE+GAWLRLFRNARVWL
Sbjct: 1054 AVAVLREQGVNGQVEMAWAFHKAGFDAVDVHMSDILEGRVSLDTFQGLVACGGFSYGDVLGAGGGWAKSVLFNERAREQFAAFFTRDDSFSLGVCNGCQMLSQLKTLIPGAENWPSFVRNESEQFEARVAMVRVEKSPSILLAGMEGSTLPIAVAHGEGRAEFRDTAHLRSMQSSSQIALRYIDNYGQVTTRYPANPNGSPSGITGLTTPDGRVTIMMPHPERVTRAVTNSWRPAEWTEDGAWLRLFRNARVWL 1307
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BLAST of mRNA_E-siliculosus-1a_F_contig14175.2467.1 vs. uniprot
Match: A0A2T0V9J3_9GAMM (Phosphoribosylformylglycinamidine synthase n=12 Tax=Halomonas TaxID=2745 RepID=A0A2T0V9J3_9GAMM)

HSP 1 Score: 486 bits (1251), Expect = 6.120e-160
Identity = 232/254 (91.34%), Postives = 249/254 (98.03%), Query Frame = 1 
Query:    1 AMAVLREQGVNGQVEMAWAFDKAGFEAVDVHMSDILEGRVSLEEFKGLVACGGFSYGDVLGAGGGWAKSVLFNERAREQFAAFFNREDSFSLGVCNGCQMLSQLKSLIPGAENWPTFLRNESEQFEARVSMVRVEKSPSILLAGMEGSQLPIAVAHGEGRAEFRDSAHLRSMQSSSQIAMRYIDNYGQATTRYPANPNGSPSGITGLTTPDGRVTIMMPHPERVARAVTNSWRPAEWTENGAWLRLFRNARVWL 762
            AMA+LREQGVNGQVEM WAFDKAGF+AVDVHMSDILEGRVSL+EFKGLVACGGFSYGDVLGAGGGWAKSVLFNERAR+QFAAFFNR+DSFSLGVCNGCQMLSQLK+LIPGAE+WP F+RNESEQFEARV+M+RVEK+PSILLAGMEGSQLPIAVAHGEGRAEFRDSAHLR MQSS+QIA+RYIDNYGQ TTRYPANPNGSPSGITGLTTPDGRVTIMMPHPERV RAVTNSWRPAEWT++GAWLR+FRNARVW+
Sbjct: 1057 AMAILREQGVNGQVEMGWAFDKAGFDAVDVHMSDILEGRVSLDEFKGLVACGGFSYGDVLGAGGGWAKSVLFNERARDQFAAFFNRDDSFSLGVCNGCQMLSQLKTLIPGAEDWPGFVRNESEQFEARVAMLRVEKTPSILLAGMEGSQLPIAVAHGEGRAEFRDSAHLRRMQSSNQIALRYIDNYGQVTTRYPANPNGSPSGITGLTTPDGRVTIMMPHPERVTRAVTNSWRPAEWTQDGAWLRMFRNARVWV 1310
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig14175.2467.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A455V6V9_9GAMM6.180e-17494.09Uncharacterized protein n=1 Tax=Halomonas axialens... [more]
A0A354XIJ5_HALSX2.620e-16694.49Phosphoribosylformylglycinamidine synthase (Fragme... [more]
A0A0D6E608_9GAMM3.790e-16394.51Phosphoribosylformylglycinamidine synthase n=49 Ta... [more]
A0A7G7ZBA3_9GAMM7.420e-16293.31Phosphoribosylformylglycinamidine synthase n=5 Tax... [more]
A0A1H9SHR3_9GAMM2.880e-16192.91Phosphoribosylformylglycinamidine synthase n=5 Tax... [more]
A0A3T1DX24_9GAMM3.270e-16195.74Uncharacterized protein n=1 Tax=Halomonas olivaria... [more]
A0A1U9RGG2_9GAMM5.350e-16192.55Phosphoribosylformylglycinamidine synthase n=2 Tax... [more]
UPI0017883B657.990e-16192.13phosphoribosylformylglycinamidine synthase n=3 Tax... [more]
A0A6M1SD64_HALSX2.920e-16092.91Phosphoribosylformylglycinamidine synthase n=12 Ta... [more]
A0A2T0V9J3_9GAMM6.120e-16091.34Phosphoribosylformylglycinamidine synthase n=12 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig14175contigE-siliculosus-1a_F_contig14175:391..1158 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size765
Model size768
Exons1
Hectar predicted targeting categoryother localisation
BRITEko00000,ko00001,ko00002,ko01000
Best eggNOG OGNA|NA|NA
Best tax levelOceanospirillales
BiGG ReactioniECH74115_1262.ECH74115_3792,iECO111_1330.ECO111_3283,iECSP_1301.ECSP_3501,iECs_1301.ECs3423,iG2583_1286.G2583_3088,iJN746.PP_1037,ic_1306.c3080
COG Functional cat.F
EC6.3.5.3
EggNOG OGs1MYN4@1224,1RMRN@1236,1XH4B@135619,COG0046@1,COG0046@2,COG0047@1,COG0047@2
EggNOG free text desc.Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate
GOsGO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0004642,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006520,GO:0006541,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009064,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016874,GO:0016879,GO:0016884,GO:0016887,GO:0017076,GO:0017111,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0046872,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605
KEGG ModuleM00048
KEGG Pathwayko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130
KEGG ReactionR04463
KEGG koko:K01952
KEGG rclassRC00010,RC01160
Preferred namepurL
Seed eggNOG ortholog1380358.JADJ01000026_gene1756
Seed ortholog evalue1.1e-138
Seed ortholog score499.2
Taxonomic scopeBacteria
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927930.9224532-CDS-E-siliculosus-1a_F_contig14175:390..11551622927930.9224532-CDS-E-siliculosus-1a_F_contig14175:390..1155Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig14175 391..1155 -
1696318742.4458199-CDS-E-siliculosus-1a_F_contig14175:390..11551696318742.4458199-CDS-E-siliculosus-1a_F_contig14175:390..1155Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig14175 391..1155 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927930.9385033-UTR-E-siliculosus-1a_F_contig14175:1155..11581622927930.9385033-UTR-E-siliculosus-1a_F_contig14175:1155..1158Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig14175 1156..1158 -
1696318742.4572992-UTR-E-siliculosus-1a_F_contig14175:1155..11581696318742.4572992-UTR-E-siliculosus-1a_F_contig14175:1155..1158Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig14175 1156..1158 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig14175.2467.1prot_E-siliculosus-1a_F_contig14175.2467.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig14175 391..1155 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig14175.2467.1

>prot_E-siliculosus-1a_F_contig14175.2467.1 ID=prot_E-siliculosus-1a_F_contig14175.2467.1|Name=mRNA_E-siliculosus-1a_F_contig14175.2467.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=255bp
MAVLREQGVNGQVEMAWAFDKAGFEAVDVHMSDILEGRVSLEEFKGLVAC
GGFSYGDVLGAGGGWAKSVLFNERAREQFAAFFNREDSFSLGVCNGCQML
SQLKSLIPGAENWPTFLRNESEQFEARVSMVRVEKSPSILLAGMEGSQLP
IAVAHGEGRAEFRDSAHLRSMQSSSQIAMRYIDNYGQATTRYPANPNGSP
SGITGLTTPDGRVTIMMPHPERVARAVTNSWRPAEWTENGAWLRLFRNAR
VWLN*
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mRNA from alignment at E-siliculosus-1a_F_contig14175:391..1158-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig14175.2467.1 ID=mRNA_E-siliculosus-1a_F_contig14175.2467.1|Name=mRNA_E-siliculosus-1a_F_contig14175.2467.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=768bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig14175:391..1158- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GCCATGGCCGTACTACGTGAGCAGGGCGTTAATGGCCAGGTGGAGATGGC
CTGGGCCTTCGATAAGGCCGGGTTTGAGGCGGTGGATGTGCACATGAGTG
ACATCCTGGAAGGGCGAGTTTCCCTGGAAGAGTTCAAAGGTCTCGTGGCC
TGTGGCGGTTTCTCCTATGGCGACGTGCTGGGTGCCGGGGGCGGCTGGGC
AAAATCGGTGCTGTTTAATGAGCGGGCTCGTGAGCAATTTGCGGCGTTCT
TTAACCGTGAAGACAGCTTCTCGCTGGGCGTATGTAACGGCTGCCAAATG
TTGTCGCAGTTGAAGTCACTGATTCCTGGTGCTGAAAACTGGCCGACCTT
TTTGCGCAACGAGTCTGAGCAGTTTGAAGCGCGGGTATCCATGGTGCGGG
TCGAGAAGAGTCCCTCGATTCTATTGGCCGGCATGGAGGGTTCACAACTT
CCTATTGCTGTCGCCCATGGCGAAGGGCGTGCAGAGTTCCGCGACAGCGC
GCACCTACGCAGCATGCAGTCGAGCAGCCAAATCGCTATGCGCTACATCG
ACAACTATGGCCAGGCGACCACGCGTTATCCAGCAAACCCCAATGGCTCG
CCCTCAGGCATTACTGGCCTAACCACGCCGGATGGTCGGGTCACCATTAT
GATGCCGCACCCGGAGCGGGTGGCGCGGGCGGTCACCAATTCCTGGCGTC
CTGCAGAGTGGACTGAAAATGGTGCTTGGTTGCGCTTATTCCGCAATGCT
CGTGTATGGCTTAACTAA
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig14175:391..1158-

>mRNA_E-siliculosus-1a_F_contig14175.2467.1 ID=mRNA_E-siliculosus-1a_F_contig14175.2467.1|Name=mRNA_E-siliculosus-1a_F_contig14175.2467.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1530bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig14175:391..1158- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGCCGTACTACGTGAGCAGGGCGTTAATGGCCAGGTGGAGATGGCCTG
GGCCTTCGATAAGGCCGGGTTTGAGGCGGTGGATGTGCACATGAGTGACA
TCCTGGAAGGGCGAGTTTCCCTGGAAGAGTTCAAAGGTCTCGTGGCCTGT
GGCGGTTTCTCCTATGGCGACGTGCTGGGTGCCGGGGGCGGCTGGGCAAA
ATCGGTGCTGTTTAATGAGCGGGCTCGTGAGCAATTTGCGGCGTTCTTTA
ACCGTGAAGACAGCTTCTCGCTGGGCGTATGTAACGGCTGCCAAATGTTG
TCGCAGTTGAAGTCACTGATTCCTGGTGCTGAAAACTGGCCGACCTTTTT
GCGCAACGAGTCTGAGCAGTTTGAAGCGCGGGTATCCATGGTGCGGGTCG
AGAAGAGTCCCTCGATTCTATTGGCCGGCATGGAGGGTTCACAACTTCCT
ATTGCTGTCGCCCATGGCGAAGGGCGTGCAGAGTTCCGCGACAGCGCGCA
CCTACGCAGCATGCAGTCGAGCAGCCAAATCGCTATGCGCTACATCGACA
ACTATGGCCAGGCGACCACGCGTTATCCAGCAAACCCCAATGGCTCGCCC
TCAGGCATTACTGGCCTAACCACGCCGGATGGTCGGGTCACCATTATGAT
GCCGCACCCGGAGCGGGTGGCGCGGGCGGTCACCAATTCCTGGCGTCCTG
CAGAGTGGACTGAAAATGGTGCTTGGTTGCGCTTATTCCGCAATGCTCGT
GTATGGCTTAACTAAATGGCCGTACTACGTGAGCAGGGCGTTAATGGCCA
GGTGGAGATGGCCTGGGCCTTCGATAAGGCCGGGTTTGAGGCGGTGGATG
TGCACATGAGTGACATCCTGGAAGGGCGAGTTTCCCTGGAAGAGTTCAAA
GGTCTCGTGGCCTGTGGCGGTTTCTCCTATGGCGACGTGCTGGGTGCCGG
GGGCGGCTGGGCAAAATCGGTGCTGTTTAATGAGCGGGCTCGTGAGCAAT
TTGCGGCGTTCTTTAACCGTGAAGACAGCTTCTCGCTGGGCGTATGTAAC
GGCTGCCAAATGTTGTCGCAGTTGAAGTCACTGATTCCTGGTGCTGAAAA
CTGGCCGACCTTTTTGCGCAACGAGTCTGAGCAGTTTGAAGCGCGGGTAT
CCATGGTGCGGGTCGAGAAGAGTCCCTCGATTCTATTGGCCGGCATGGAG
GGTTCACAACTTCCTATTGCTGTCGCCCATGGCGAAGGGCGTGCAGAGTT
CCGCGACAGCGCGCACCTACGCAGCATGCAGTCGAGCAGCCAAATCGCTA
TGCGCTACATCGACAACTATGGCCAGGCGACCACGCGTTATCCAGCAAAC
CCCAATGGCTCGCCCTCAGGCATTACTGGCCTAACCACGCCGGATGGTCG
GGTCACCATTATGATGCCGCACCCGGAGCGGGTGGCGCGGGCGGTCACCA
ATTCCTGGCGTCCTGCAGAGTGGACTGAAAATGGTGCTTGGTTGCGCTTA
TTCCGCAATGCTCGTGTATGGCTTAACTAA
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