mRNA_E-siliculosus-1a_F_contig1416.2460.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1416.2460.1
Unique NamemRNA_E-siliculosus-1a_F_contig1416.2460.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1416.2460.1 vs. uniprot
Match: D8LQI0_ECTSI (JmjC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQI0_ECTSI)

HSP 1 Score: 741 bits (1914), Expect = 3.680e-265
Identity = 382/409 (93.40%), Postives = 388/409 (94.87%), Query Frame = 2
Query:   74 TLVGTRAFNILPQGKSPSRFQPVPPAXXXXXXXXXXXXXXXTGD--STHTKRRPRPGTLSASNAYGHASSRTADHDGDVPASLPRIDVTGLSRAQVADLVDFSRPCILTGVLPSPDCESWCDGLLQDLGEATCAFQIRDNESGHSEVFEAGLMDFVQGLQDESTHNESWYLLDEHLLDFPQARPELGALLEKPQNLLGTDEFQLFPPSVRPQNLCTIVGGVGARSFLHSDPMEWMGWNVLLEGRKLWTFLPPLADLDSSLGTYRLAPNAFGSHNVSAGWQSNVDLYQHGAATASWPTAGEGQEVMQHAVSGVQKAGELVLIPPRHWHQVYHLEPSLAVASQYMDFRVRDRVFRHMLDWCGASDDVLLSSRFDALAPRDQIKEVLKVALVARHGREKGLEAFDGLDDPYH 1294
            TLV TRAFNILPQGKSP+RFQ   P XXXXXXXXXXXXXXX     S+H KRRPRPGTLSAS+A GHASSRT DHDGDVPASLPRIDVTGLSRAQVADLVDFSRPCILTGVL SPDCESWCDGLLQDLGE TCAFQIRDNESG SEVFEA LMDFV+ LQDESTHNESWYLLDEHLLDFPQARPELGALLEKPQ+LLGTDEFQLFPPSVRPQNLCTIVGGVGARSFLHSDPMEWMGWNVLLEGRKLWTFLPPLADLDSSLGTYRLAPNAFGSHNVSAGWQSNVDLYQHGAATASWPTAGEGQEVMQHAVSGVQ+AGELVLIPPRHWHQVYHLEPSLAVASQYMDFRVRDRVFRHMLDWCGASDDVLLSSRFDALA RDQIKEVLKVALVARHG EKGLEAFDGLDDP H
Sbjct:    2 TLVETRAFNILPQGKSPTRFQACAPXXXXXXXXXXXXXXXXXXAVFSSHAKRRPRPGTLSASSADGHASSRTVDHDGDVPASLPRIDVTGLSRAQVADLVDFSRPCILTGVLSSPDCESWCDGLLQDLGEETCAFQIRDNESGRSEVFEASLMDFVKRLQDESTHNESWYLLDEHLLDFPQARPELGALLEKPQDLLGTDEFQLFPPSVRPQNLCTIVGGVGARSFLHSDPMEWMGWNVLLEGRKLWTFLPPLADLDSSLGTYRLAPNAFGSHNVSAGWQSNVDLYQHGAATASWPTAGEGQEVMQHAVSGVQEAGELVLIPPRHWHQVYHLEPSLAVASQYMDFRVRDRVFRHMLDWCGASDDVLLSSRFDALALRDQIKEVLKVALVARHGGEKGLEAFDGLDDPSH 410          
BLAST of mRNA_E-siliculosus-1a_F_contig1416.2460.1 vs. uniprot
Match: A0A7S2R9P6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R9P6_9STRA)

HSP 1 Score: 206 bits (525), Expect = 4.010e-56
Identity = 121/339 (35.69%), Postives = 172/339 (50.74%), Query Frame = 2
Query:  419 ESWCDGLLQDLGEATCAFQIRDNESGHSEVFEAGLMDFVQGLQDESTHNESWYLLDEHLLDFPQARPELGALLEKPQNLLGTDEFQLFPPSVRPQNLCTIVGGVGARSFLHSDPMEWMGWNVLLEGRKLWTFLPPLADLDSSLGTYRLAPNAF--GSHNVSAGWQSNVDLYQHGAA----TASWPTAG---------------------------------------EGQEVMQHAVSGVQKAGELVLIPPRHWHQVYHLEPSLAVASQYMDFRVRDRVFRHMLDWCGASDDVLLSSRFDALAPRD----QIKEVLKVALVARHGREKGLEAFDGLDDP 1288
            E+W     +   +       +D+ +G +   +  L  FV  L  +S H  S+YLLDE LL    + P L + L  P+   G D F LFP  ++P+  C ++GG G+RS LH+DPMEW GWN LLEG KLWTFLPP    +++LG+ R+    +  G +N+SAGWQS+VDLY    A    +  WP+A                                        +G+ +    ++ +Q+ G+LV IPP  WHQ YHLEPS+AVA QY+  +   +V  H+  WC AS      S F  +A  +     I+E+L +AL A+HG+ KG E F  L  P
Sbjct:  117 EAWTAAFFEAFAQERVTCHTKDSTTGETTALDLSLSHFVD-LAFKSNHQHSYYLLDESLLS---SAPSLASSLTLPEAWFGKDHFGLFPAELQPKQPCLVMGGAGSRSSLHADPMEWTGWNYLLEGSKLWTFLPPGKGTETALGSRRVLSGEWDGGKYNISAGWQSDVDLYMEKIAGKGRSGDWPSAAALGVMPSIARDYALGLVEGSCNTGHPFMPSNAMVLDALVDGRSLEDGRIAVLQREGDLVHIPPGWWHQTYHLEPSVAVAGQYLSSQNFQKVAAHVCKWCDASIGDA-GSHFQQVADTEGYETAIQELLLLALRAQHGQAKGDELFSSLTFP 450          
BLAST of mRNA_E-siliculosus-1a_F_contig1416.2460.1 vs. uniprot
Match: W7TWL4_9STRA (F-box protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TWL4_9STRA)

HSP 1 Score: 179 bits (455), Expect = 9.850e-47
Identity = 125/372 (33.60%), Postives = 177/372 (47.58%), Query Frame = 2
Query:  317 PRIDVTGLSRAQVADLVDFSRPCILTGVLPS-PDC-----ESWCDGLLQDLGEATCAFQIRDNES-GHSEVFEAGLMDFVQGLQDESTHNESWYLLDEHLLDFPQARPELGALLEKPQNLLGT-DEFQLFPPSVRPQNLCTIVGGVGARSFLHSDPMEWMGWNVLLEGRKLWTFLPPLADLDSSLGTYRLAPNAFGSHNVSAGWQS-NVDLYQ------HGAATASWPTAGEGQEVMQHAVSGVQKAGELVLIPPRHWHQVYHLEPSLAVASQYMDFRVRDRVFRHMLDWCGASD--------------------------------DVLLSSRFDALAPRDQ----IKEVLKVALVARHGREKGLEAFDGL 1279
            P +D   L   Q  D      PC+LT      P+      +++ D   ++  +     Q++ N       ++   L   V G+  +STH E+WYLL+E LL+  Q R ++      P +L G  D F LFP  +RP+  C I+GG GARSFLH DP EW G N LLEGRK+WTF PP +   + LG  R+ P A+    VSAGW+S + DLY        GA T   P      E +Q  V   Q+ GELV+IPP   HQVYHL+P L++A Q  +      V  HML W   S                                 +++     + +  R Q    I++ L+ A++ RHG E+GL+A++ L
Sbjct:   34 PCLDARDLPSQQALDAYIKKGPCVLTHAFDKDPNTRKMADDTFSDTFFEEFQDVELEVQLKRNSKIAKPRLYSGTLAGIVDGMMQKSTHEEAWYLLNEKLLEDSQNR-KIKDPFRLPPSLFGKLDYFDLFPQRIRPKKHCLILGGTGARSFLHVDPFEWTGVNYLLEGRKIWTFFPPCS---ADLGLKRVLPEAW-EGEVSAGWKSTDFDLYYKVPEIFEGAVTLDLPEVLADVEGVQALV---QEEGELVVIPPGWAHQVYHLKPGLSLAWQVCNHGNLKNVIMHMLTWAIESGGNLRHAQERPLHGGKAGLGQMEGTQEHVTRMVEIICQDTTEGVDERHQVMATIEKALRQAMILRHGPERGLQAYERL 397          
BLAST of mRNA_E-siliculosus-1a_F_contig1416.2460.1 vs. uniprot
Match: A0A8J5Y022_DIALT (JmjC domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5Y022_DIALT)

HSP 1 Score: 171 bits (433), Expect = 2.740e-44
Identity = 117/309 (37.86%), Postives = 152/309 (49.19%), Query Frame = 2
Query:  380 PCILTGVLPSPDC-ESWCDGLLQDLGEATCAFQIRDNESGH-SEVFEAGLMDFVQGLQDESTHNESWYLLDEHLLDFPQARPELGALLEKPQNLLGTDEFQL-FPPSVRPQNLCTIVGGVGARSFLHSDPMEWMGWNVLLEGRKLWTFLPPLADLDSSLGTYRLAPNAFGSHN--VSAGWQSNVDLYQHGAATASW--------------------------PTAGEGQEVMQHAVSGVQKAGELVLIPPRHWHQVYHLEPSLAVASQYMDFRVRDRVFRHMLDWC--GASDDVLLSSRFDALAPRDQI 1207
            P +LT  L      E+W D L++    A    Q+R   S    EV  +G  +        ++H+  W LL +  L   +A P+L   L     L   D F+  FPP +RP   C IVGG GARS LH+DP EW+G NV LEGRKLW FLPP  +L + L  YRL   A+GS    +SAGWQS+ DLY    A A                            P A    +  +  V  VQ+AGEL+LIPP  WHQ Y+ EPS   A QY+D   R  VF+H+LDW   G   D + +S    L P++Q+
Sbjct:    5 PLLLTHALADGSALETWADRLVEHAAAARVEVQVRRGRSTELREVTLSGACELAY-----ASHHSEWSLLFDERLVSARA-PQLERELALRPGLFEPDWFEAHFPPELRPSRTCVIVGGEGARSTLHADPFEWVGTNVCLEGRKLWRFLPPEPELSAQLRGYRLPSIAWGSQGGALSAGWQSDFDLYATRRAGAPGARALRDSARADEQLRAMADVRTGLLRPDARLPADAARRLVGCVQRAGELLLIPPGWWHQSYYPEPSFCAAGQYLDSFCRASVFQHVLDWTRTGRRADEIDAS----LRPQEQV 303          
BLAST of mRNA_E-siliculosus-1a_F_contig1416.2460.1 vs. uniprot
Match: A0A8J2SEA1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SEA1_9STRA)

HSP 1 Score: 149 bits (375), Expect = 2.670e-36
Identity = 108/321 (33.64%), Postives = 148/321 (46.11%), Query Frame = 2
Query:  320 RIDVTGLSRAQVADLVDFSRPCILTGVLPSPDCESWCDGLLQDLGEATCAFQIRDNESGHSEVFEAGLMDFVQGLQDESTHNESWYLLDEHLLDFPQARPELGALLEKPQNLLGTDE---FQLFPPSVRPQNLCTIVGGVGARSFLHSDPMEWMGWNVLLEGRKLWTFLPPLADLDSSLGTYRLAPNAFGSHNVSAGWQSNVDLY--QHGAATASWPTAGEGQE-------------------VMQHAVSGVQKAGELVLIPPRHWHQVYHLEPSLAVASQYMDFRVRDRVFRHMLDWCGASDDVLLSSRFDALAPRDQIK 1210
            RID       + A  +D  +P +  G L    C++W   L++  G+A    QI        + F+A L +F       STH    +L DE LL+       L A    PQ  +   E      FP   RP + C +  G GARS LH DP +W G ++ LEG K+W FL  + D D  L  Y+L   AFG    SAG QS++DLY  Q G     WP A + ++                   V     + +Q AG++V++PP+ WHQ Y LEPS AVASQ+   R    VF HM+      DD +L     A  PRD ++
Sbjct:   23 RIDAKDAPAIRAA--LDSGQPFVAAGALSPEACDAWTGNLMEGFGDAIVTQQIA------GDPFDAPLAEFFYDAL-ASTHETPHFLFDEALLE-----GNLRAAAIAPQRAIFEGEESWLDAFPAERRPADACVVCAGAGARSPLHRDPYDWTGTSLCLEGSKVWRFLLDVDDAD--LEAYKLPSEAFGDD--SAGTQSDIDLYCVQEG----DWPDAADFEDDRDLVKAKAGPENFTPSTQVPGRFCTALQFAGDVVIVPPKSWHQTYALEPSCAVASQFCGRRDAPTVFEHMIRHRSRDDDRVLDLARTA-PPRDAVR 320          
BLAST of mRNA_E-siliculosus-1a_F_contig1416.2460.1 vs. uniprot
Match: F0YQV8_AURAN (Expressed protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YQV8_AURAN)

HSP 1 Score: 144 bits (364), Expect = 3.790e-35
Identity = 102/280 (36.43%), Postives = 131/280 (46.79%), Query Frame = 2
Query:  317 PRIDVTGLSRAQVADLVDFSRPCILTGVLPSPDCESWCDGLLQDLGEATCAFQIRDNESGHSEVFEAGLMDFVQGLQDESTHNESWYLLDEHLLDFPQARPELGALLEKPQNLLGTDE---FQLFPPSVRPQNLCTIVGGVGARSFLHSDPMEWMGWNVLLEGRKLWTFLPPLADLDSSLGTYRLAPNAFGSHNVSAGWQSNVDLYQHG---------------AATASWPTAGE-----GQEVMQHAVSGVQKAGELVLIPPRHWHQVYHLEPSLAVAS 1087
            P   V     A +A  +D   P I    L + DCE+W D L+  LG+A    Q R       E  E  L  F +     S+H    +L DE LLD      +L      PQ  +   E   F  FP S RP++ C +  G GARS LH DP +W G ++ +EG K+W F   +AD D  LG Y LA  AFG    SAG QS+ DLY                  A  A+W  A               V+ +Q+AG++V++PPR WHQ Y LEPSLAVAS
Sbjct:   30 PAARVDARDHAAIAAALDAGEPFIAAEALSARDCEAWTDALMMRLGDAPVRRQRR------GEALEMPLGAFFEDAL-TSSHALPSFLFDEFLLD---GDDDLRGAAVGPQRAIFGGERSWFDHFPESRRPRDGCVVGAGAGARSPLHRDPYDWTGTSLCVEGSKVWRFALDVADAD--LGAYELASEAFGGD--SAGTQSDADLYARRVGDGWPEPYAYDDDPALAATWSAAARFAPDVALPKTARFVTALQRAGDVVVVPPRAWHQTYALEPSLAVAS 295          
BLAST of mRNA_E-siliculosus-1a_F_contig1416.2460.1 vs. uniprot
Match: A0A7S1WCY4_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1WCY4_ALECA)

HSP 1 Score: 142 bits (358), Expect = 1.250e-33
Identity = 106/324 (32.72%), Postives = 154/324 (47.53%), Query Frame = 2
Query:  356 ADLVDFSRPCILTGVLPSP---DCESWCDGLLQDLGEATCAFQIRDNESGHSEVFEAGLMDFVQGLQDESTHNESWYLLDEHLLDFPQARPELGALLEKPQNLLGTDEFQL--FPPSVRPQNLCTIVGGVGARSFLHSDPMEWMGWNVLLEGRKLWTFLPPLADLDSSLGTYRLAPNAFGSH--NVSAGWQSNVDLYQ------------HGAATASWPTAGEGQEVMQHAVSGVQKAGELVLIPPRHWHQVYHLEPSLAVASQYMDFRVRDRVFRHMLDWCG--ASDDVLLSSRFDALAPRDQIKEVLKVALVARHGREKGLE 1264
            A+ +D  +P +LT  L S    D  +W +G+L   G+   A+  R   +       A L    Q L D S+H      +DEHLL+       L A+L +    +  D FQ   F   +R   +C   GG G RS  H+D ++W GWNVLL G KLW +     + D++    R+ P    +H   ++AGW+S  D Y             H       P A  G    +      Q+AGE+V+ P   WHQVYH + ++A+ASQY + R+  R   H+L+WCG  A+   LL +R  + AP  QI E L++AL  R    +G E
Sbjct:    8 AERLDGRQPVLLTHALESRGRWDPRAWEEGVLGHYGQRVVAYSTRGRLTTCQSY--APLSRAWQ-LVDGSSHARPVSYMDEHLLE----GEVLDAVLSRVPAFMRKDYFQEEGFKRHIRIPPVCFSRGGRGTRSDFHADFLDWTGWNVLLRGDKLWRWWRRRPEGDAAFAGVRV-PRLKEAHPEGLAAGWESRADAYAEVHGENPGPGRPHSFVPRPSPDAAPGAAWPEPDFETTQRAGEMVVFPGSWWHQVYHYDETVALASQYCNDRILARCLAHVLEWCGVGAAAVRLLLARLGSEAPEVQIDEALRLALATRLQPPEGAE 323          
BLAST of mRNA_E-siliculosus-1a_F_contig1416.2460.1 vs. uniprot
Match: A0A830HZM1_9CHLO (JmjC domain-containing protein n=2 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HZM1_9CHLO)

HSP 1 Score: 137 bits (345), Expect = 3.340e-32
Identity = 86/253 (33.99%), Postives = 125/253 (49.41%), Query Frame = 2
Query:  422 SWCDGLLQDLGEATCAFQIRDNESGHSEVFEAGLMDFVQGLQDESTHNESWYLLDEHLLDFPQARPELGALLEKPQNLLGTDEFQLFPPSVRPQNLCTIVGGVGARSFLHSDPMEWMGWNVLLEGRKLWTFLPPLADLDSSLGTYRLAPNAFGSHNVS--AGWQSNVDLYQHGAATASWPTAGEGQE---------VMQHAVSGVQKAGELVLIPPRHWHQVYHLEPSLAVASQYMDFRVRDRVFRHMLDWCG 1147
            SW   L+           +R+N   H+  F A  M+ +  +   S H+ S  +++E LL    A  +  A L  P+ +   ++    PPS+RP   C + GG G+RS LH+D   W+GWN L+EG K WTF+P  A   +     R+ P A+   N S  AGWQ+ VD Y   +A  +  TA  G +         +  H ++  Q  GELV+IPP  +HQVYH   ++A+A QY D      V RH+  W G
Sbjct:   52 SWLSDLVASAENTHVEVLLRENN--HTSSFVAPFMEALGEIAHASDHDSSVLIVEEDLLANSPAHVQDAARL--PKEICAENKLDQLPPSLRP-GTCVLFGGAGSRSSLHADAFGWVGWNYLVEGEKTWTFIPHDA-FPADEVCVRVPPAAWAGDNTSIGAGWQTAVDAYAERSADGTSFTARGGTQEHARAVEEAIQNHGITVHQSEGELVIIPPECFHQVYHHTATVAIAGQYADNTNWPIVCRHVGRWVG 298          
BLAST of mRNA_E-siliculosus-1a_F_contig1416.2460.1 vs. uniprot
Match: A0A835YWS3_9STRA (JmjC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWS3_9STRA)

HSP 1 Score: 130 bits (327), Expect = 2.000e-31
Identity = 80/176 (45.45%), Postives = 100/176 (56.82%), Query Frame = 2
Query:  788 LEGRKLWTFLPPLADLDSSLGTYRLAPNAFG-SHNVSAGWQSNVDLYQ-------HGAATASWPTA---GEGQEVMQHAVSGVQKAGELVLIPPRHWHQVYHLEPSLAVASQ-YMDFRVRDRVFRHMLDWCGASDDVLLSSRFDALAPRDQIKEVLKVALVARHGREKGLEAFDGL 1279
            +EG KLWTFLPP  +    L  YRL PNA+G S+NVSAGWQS VDLY+       HG+       A   G  ++V       VQ+ GE VLIPPR WHQV HL PS+AVASQ Y   R R R+F+H+ DWCG            +  P+ Q++ VL+  L A+HG + G   F  L
Sbjct:    1 MEGEKLWTFLPPCPE--HLLDGYRLPPNAWGGSYNVSAGWQSPVDLYRPFSESGAHGSDGIMLSAAAAYGVPEDVWARRKQVVQREGETVLIPPRWWHQVIHLAPSIAVASQHYAGARGRRRIFQHIRDWCGCGGSAA-PPEIRSWPPQKQVEWVLQEGLCAKHGTDVGERLFKEL 173          
BLAST of mRNA_E-siliculosus-1a_F_contig1416.2460.1 vs. uniprot
Match: A0A812KFH2_9DINO (PSR protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A812KFH2_9DINO)

HSP 1 Score: 127 bits (318), Expect = 1.130e-28
Identity = 87/264 (32.95%), Postives = 121/264 (45.83%), Query Frame = 2
Query:  428 CDGLLQDLGEATCAFQIRDNESGHSEVFEAG------LMDFVQGLQDESTHNESWYLLDEHLLDFPQARPELGALLEKPQNLLGTDEFQLFPPSVRPQNLCTIVGGVGARSFLHSDPMEWMGWNVLLEGRKLWTFLPPLADLDSSLGTYRLAPNAFGSHN-------VSAGWQSNVDLYQHGAATASWPTAGE--------GQEVMQHAVSG----VQKAGELVLIPPRHWHQVYHLEPSLAVASQYMDFRVRDRVFRHMLDWC 1144
            C  LL++ G   C  ++    + H E+  A       L DFV      S H +   L+DE+++          +LLE     L  D F  FP  +RP  LC +VGG GARS LH DP+ W GWN LL+GRKLW F P   D+  +   +R     FG          + +GW+S+VDL+ +    A+ P            GQ       S     VQ+ GE ++ P   WHQ YHL P+   A Q ++     RV  H++ WC
Sbjct:   39 CKTLLEEAG---CQ-EVEYKRATHGELNLATDLLSKVLCDFVPN----SYHEDPVLLMDENVVSTTSLA---NSLLEAAPPFLREDLFCEFPRMLRPAPLCLVVGGRGARSDLHIDPLSWTGWNCLLQGRKLWRFFP---DIPQNAEAFRPMSRPFGIRKGGAEVCTIGSGWRSDVDLFANRTHPAAEPLCDSFGSLSPDLGQFPHVKGCSAPLEHVQEPGETLIFPGHWWHQTYHLTPTFGFAGQVLNSGNLGRVLGHIIRWC 288          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1416.2460.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
D8LQI0_ECTSI3.680e-26593.40JmjC domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A7S2R9P6_9STRA4.010e-5635.69Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
W7TWL4_9STRA9.850e-4733.60F-box protein n=1 Tax=Nannochloropsis gaditana Tax... [more]
A0A8J5Y022_DIALT2.740e-4437.86JmjC domain-containing protein n=2 Tax=Diacronema ... [more]
A0A8J2SEA1_9STRA2.670e-3633.64Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
F0YQV8_AURAN3.790e-3536.43Expressed protein (Fragment) n=1 Tax=Aureococcus a... [more]
A0A7S1WCY4_ALECA1.250e-3332.72Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]
A0A830HZM1_9CHLO3.340e-3233.99JmjC domain-containing protein n=2 Tax=Pycnococcus... [more]
A0A835YWS3_9STRA2.000e-3145.45JmjC domain-containing protein n=1 Tax=Tribonema m... [more]
A0A812KFH2_9DINO1.130e-2832.95PSR protein n=2 Tax=Symbiodinium TaxID=2949 RepID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1416contigE-siliculosus-1a_F_contig1416:27320..30562 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size1257
Model size1936
Exons3
Ec32 orthologEc-10_005720.1
Ec32 ortholog descriptionJumonji domain protein
Hectar predicted targeting categorychloroplast
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
EggNOG OGs2CZ69@1,2S8PH@2759
Seed eggNOG ortholog2880.D8LQI0
Seed ortholog evalue8.8e-213
Seed ortholog score746.1
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1416.2460.1prot_E-siliculosus-1a_F_contig1416.2460.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1416 27360..29923 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927930.4377236-UTR-E-siliculosus-1a_F_contig1416:27319..273591622927930.4377236-UTR-E-siliculosus-1a_F_contig1416:27319..27359Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1416 27320..27359 +
1696318742.2266781-UTR-E-siliculosus-1a_F_contig1416:27319..273591696318742.2266781-UTR-E-siliculosus-1a_F_contig1416:27319..27359Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1416 27320..27359 +
1622927930.5229452-UTR-E-siliculosus-1a_F_contig1416:29923..305621622927930.5229452-UTR-E-siliculosus-1a_F_contig1416:29923..30562Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1416 29924..30562 +
1696318742.2643435-UTR-E-siliculosus-1a_F_contig1416:29923..305621696318742.2643435-UTR-E-siliculosus-1a_F_contig1416:29923..30562Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1416 29924..30562 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927930.4513168-CDS-E-siliculosus-1a_F_contig1416:27359..278921622927930.4513168-CDS-E-siliculosus-1a_F_contig1416:27359..27892Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1416 27360..27892 +
1696318742.238357-CDS-E-siliculosus-1a_F_contig1416:27359..278921696318742.238357-CDS-E-siliculosus-1a_F_contig1416:27359..27892Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1416 27360..27892 +
1622927930.4661431-CDS-E-siliculosus-1a_F_contig1416:28179..286571622927930.4661431-CDS-E-siliculosus-1a_F_contig1416:28179..28657Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1416 28180..28657 +
1696318742.2469125-CDS-E-siliculosus-1a_F_contig1416:28179..286571696318742.2469125-CDS-E-siliculosus-1a_F_contig1416:28179..28657Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1416 28180..28657 +
1622927930.5102966-CDS-E-siliculosus-1a_F_contig1416:29677..299231622927930.5102966-CDS-E-siliculosus-1a_F_contig1416:29677..29923Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1416 29678..29923 +
1696318742.2556496-CDS-E-siliculosus-1a_F_contig1416:29677..299231696318742.2556496-CDS-E-siliculosus-1a_F_contig1416:29677..29923Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1416 29678..29923 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1416.2460.1

>prot_E-siliculosus-1a_F_contig1416.2460.1 ID=prot_E-siliculosus-1a_F_contig1416.2460.1|Name=mRNA_E-siliculosus-1a_F_contig1416.2460.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=419bp
MLWLGVGLPLTTLVGTRAFNILPQGKSPSRFQPVPPAAAAAAVDSGARRR
RRTGDSTHTKRRPRPGTLSASNAYGHASSRTADHDGDVPASLPRIDVTGL
SRAQVADLVDFSRPCILTGVLPSPDCESWCDGLLQDLGEATCAFQIRDNE
SGHSEVFEAGLMDFVQGLQDESTHNESWYLLDEHLLDFPQARPELGALLE
KPQNLLGTDEFQLFPPSVRPQNLCTIVGGVGARSFLHSDPMEWMGWNVLL
EGRKLWTFLPPLADLDSSLGTYRLAPNAFGSHNVSAGWQSNVDLYQHGAA
TASWPTAGEGQEVMQHAVSGVQKAGELVLIPPRHWHQVYHLEPSLAVASQ
YMDFRVRDRVFRHMLDWCGASDDVLLSSRFDALAPRDQIKEVLKVALVAR
HGREKGLEAFDGLDDPYH*
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mRNA from alignment at E-siliculosus-1a_F_contig1416:27320..30562+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1416.2460.1 ID=mRNA_E-siliculosus-1a_F_contig1416.2460.1|Name=mRNA_E-siliculosus-1a_F_contig1416.2460.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=3243bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1416:27320..30562+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GGAGTGCTCCCCGCACGGCCACAAATTAGGCTTGAAGACCATGCTGTGGC TAGGCGTAGGGCTGCCTCTTACGACCCTTGTGGGAACCCGGGCCTTCAAC ATACTGCCGCAGGGGAAGAGCCCGTCACGGTTTCAGCCTGTTCCTCCTGC GGCTGCCGCTGCTGCAGTCGACAGTGGTGCAAGGAGACGACGCCGAACCG GGGATAGCACGCACACGAAGAGAAGGCCTCGACCAGGCACACTCTCCGCA TCGAATGCTTACGGTCACGCTTCTTCGAGAACAGCAGACCATGATGGCGA TGTCCCGGCCTCGTTACCGCGAATAGACGTGACCGGCCTCTCCCGAGCAC AAGTGGCCGACCTTGTCGACTTCTCCCGGCCGTGCATCTTGACAGGAGTG CTTCCCTCGCCGGACTGCGAGTCGTGGTGCGACGGGCTGCTGCAAGACTT GGGGGAGGCAACTTGTGCTTTTCAAATACGCGACAACGAGAGCGGTCACA GCGAGGTGTTCGAGGCAGGCCTCATGGACTTTGTGCAAGGCTTACAGGAC GAGAGCACACACAACGAGAGCTGGTGAGCAGGCGTTTGCTAGTAGCATAG GCTGGGCCACCGGAGGACATCCATGCAAGGCCGCATTATTTTCTTCTGCC CTGTACCGATGGTTTTGGAAAGGCTTGAGATCGCACGTTATACCCCAAGC GAGCCCCGTGCTCCGCCCGAAATTCCTAGGAGCAGAAACAACCAACGTTG CCGCGCACTCCCAACAATAGTGGACCACCTGGCCTGTGCGAGAAGACCTC TCCGTTCCGCCATCATGCCACCACGCACGCACCAAAACTCTCGTTCGCCT TGTGCGTCAGGTATCTGCTCGACGAGCACCTCCTCGACTTTCCACAAGCT CGCCCCGAACTCGGTGCCCTGCTCGAGAAGCCGCAGAACCTCCTTGGGAC AGACGAGTTTCAGCTTTTCCCTCCTTCCGTCAGGCCCCAAAACCTGTGTA CCATCGTGGGCGGCGTGGGGGCGCGCTCGTTTCTCCACAGCGACCCCATG GAGTGGATGGGCTGGAACGTTCTTCTCGAGGGCCGGAAGCTATGGACGTT CCTGCCTCCATTGGCCGACCTGGATTCCTCTCTTGGAACCTACCGCTTGG CCCCTAATGCCTTCGGCTCCCACAACGTCTCGGCGGGATGGCAGAGCAAC GTGGACCTCTACCAGCACGGAGCGGCCACGGCGTCTTGGCCGACAGCGGG AGAGGGGCAAGAGGTCATGCAGCACGCTGTCAGTGGAGTACAGAAGGCGG GGGAACTTGTTCTTATTCCGCCTCGTCATTGGCACCAGGTATGTGTGGGC AAGCGAAGGCCTCGCTTGTGGGTGTGGTTTGTATGCATGTGTGGAACATA CCCGTGCTATCTCCAGACATGCTGTTAGACGTATGACGCAACGAGATGGG GAGTGGTGAATATTCGGTACGCACGGCAATGAGCTTCGATTCGGTTGTCG GGATGTGGTCCGTTCAGAATTGTTGTCGGTTTCATCCCGGGCACTGATAT GTAGCCGAGTGAGAAGTCTCATCCCGCGTTTGGCACCAAACGCGAAACTC CAAACACTTACAATATCACTGTAGAGTAAACACATCAGCATCGGAGCCCG TGGTTTCTTCGCGGGAGTCTGGTACCAATAAAACGATCTCAGCGTGCTGC TGCTGTTGGTTGGGCCCTGTTCCATGCTGCTACAGTTCGCGCATGAAAAA CCTTGTTACTTCGAACCCTTGTGTTGTCCTCTGTAGGTTGCCAGAATTGC TGAACGTGGATGTTCACACACACCAGCTGTTGCTGCGTTTGGATGCAGCC AATGTCTTCGGTCTCAACGATTGCTGTGGACCACGTCAATCCCTTCATAT CTCATAGCATATAAGCTGGCGTCAACGGCAGTAAATAGACAAGTCATGTC CTGCGTCAATGCTTGCCGCTACAGGAAACAACTCAATCGATTCACCATTG GTGAATAGTCGTGCCAAATTGAATTGTGAACATTTGATACATGGTTGTAA CAGAGAACTCAAACAGCAGTGTTACCGACCAATAACCGGTGAATCTGACG AAATATTTATGCAGAATATCGATGGTTGGCAGCTGGGATGGCTGTACGGG AAGATCAAACGGCAAATAGCCAACGTAGCTCGCTTTTTTATTCGAGTATA CATTTTTCGGGGTAAGTTAGCCTGTGACCACGGGAATCGACCGCGTCAAT AATTAGATCAGGTCAGCACGGATAGGGAGATCGGAACGGTTGGTTAAAGT GAAGACAACAACAACAACCTCGCACCCACTTTTTCATTTCATCTGCTGTG ATCATCAGGTGTACCACCTCGAGCCGTCATTGGCAGTCGCGTCGCAGTAC ATGGACTTTCGGGTACGAGATCGCGTGTTCCGACACATGCTGGACTGGTG CGGGGCTTCCGACGACGTGCTTCTATCCTCCCGGTTCGACGCTCTGGCGC CTCGCGACCAGATCAAGGAGGTGCTGAAGGTGGCGCTCGTAGCACGTCAC GGCCGAGAAAAGGGCCTGGAAGCCTTCGATGGCCTCGACGACCCATATCA TTGAACGGGACCAATCTTGTCGTTCGGTTTCGTAGCGAAATGCCCGAGAT TTTCCTATTGGTCAACCTCGTTGTTGCTACATTATTATTGGCCGATAGTC CTGGCGTGGCGGCAGCCACGGGGTCGGCTCCTGAGCTCGTTTTTCTATGA GGTTCATTCTATTCTCCTCGTTTGATTGATCGATCTCACGGGTATGAGGG CCCTCCTCTGCTTTCCAGAGGGGAGGCGGGAACTCTCACGCGGTTTCGTG ACCTGCGTACTACTTTCCTTGCGGATGGATCCAAGAATAGCCAAGAATAG CCAAGAACGAACCAGCAGGTTTGGTTGTTTCTCCGGATGTGTTTGTCCGA TGTTGTACATATCCTTCCACAGCAGCAGTATACTAGACAGGAATATCCAC GCGCACTGGTATGCGATGATCTGCTTCCTATTAGCGCCTGTTTTGTCGCC GTTGATTGTATGACGGCTCGATTTCAAGTGTCGTGTGTCACAGCCCTGCC ACCATGCAGTCTGCATGCCAACAGATCAGCGTTGATGGACGGGAGAGCGT GCATTCTCGGCTGGTGGTGATGAAAGCATTGATGGTTAAGCAAGCAGGTG ATGCCGTGGTGGTCGGCTTGAAAGAGGCGGTGAAGAAACAAAC
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1416:27320..30562+

>mRNA_E-siliculosus-1a_F_contig1416.2460.1 ID=mRNA_E-siliculosus-1a_F_contig1416.2460.1|Name=mRNA_E-siliculosus-1a_F_contig1416.2460.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2514bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1416:27320..30562+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGCTGTGGCTAGGCGTAGGGCTGCCTCTTACGACCCTTGTGGGAACCCG
GGCCTTCAACATACTGCCGCAGGGGAAGAGCCCGTCACGGTTTCAGCCTG
TTCCTCCTGCGGCTGCCGCTGCTGCAGTCGACAGTGGTGCAAGGAGACGA
CGCCGAACCGGGGATAGCACGCACACGAAGAGAAGGCCTCGACCAGGCAC
ACTCTCCGCATCGAATGCTTACGGTCACGCTTCTTCGAGAACAGCAGACC
ATGATGGCGATGTCCCGGCCTCGTTACCGCGAATAGACGTGACCGGCCTC
TCCCGAGCACAAGTGGCCGACCTTGTCGACTTCTCCCGGCCGTGCATCTT
GACAGGAGTGCTTCCCTCGCCGGACTGCGAGTCGTGGTGCGACGGGCTGC
TGCAAGACTTGGGGGAGGCAACTTGTGCTTTTCAAATACGCGACAACGAG
AGCGGTCACAGCGAGGTGTTCGAGGCAGGCCTCATGGACTTTGTGCAAGG
CTTACAGGACGAGAGCACACACAACGAGAGCTGATGCTGTGGCTAGGCGT
AGGGCTGCCTCTTACGACCCTTGTGGGAACCCGGGCCTTCAACATACTGC
CGCAGGGGAAGAGCCCGTCACGGTTTCAGCCTGTTCCTCCTGCGGCTGCC
GCTGCTGCAGTCGACAGTGGTGCAAGGAGACGACGCCGAACCGGGGATAG
CACGCACACGAAGAGAAGGCCTCGACCAGGCACACTCTCCGCATCGAATG
CTTACGGTCACGCTTCTTCGAGAACAGCAGACCATGATGGCGATGTCCCG
GCCTCGTTACCGCGAATAGACGTGACCGGCCTCTCCCGAGCACAAGTGGC
CGACCTTGTCGACTTCTCCCGGCCGTGCATCTTGACAGGAGTGCTTCCCT
CGCCGGACTGCGAGTCGTGGTGCGACGGGCTGCTGCAAGACTTGGGGGAG
GCAACTTGTGCTTTTCAAATACGCGACAACGAGAGCGGTCACAGCGAGGT
GTTCGAGGCAGGCCTCATGGACTTTGTGCAAGGCTTACAGGACGAGAGCA
CACACAACGAGAGCTGGTATCTGCTCGACGAGCACCTCCTCGACTTTCCA
CAAGCTCGCCCCGAACTCGGTGCCCTGCTCGAGAAGCCGCAGAACCTCCT
TGGGACAGACGAGTTTCAGCTTTTCCCTCCTTCCGTCAGGCCCCAAAACC
TGTGTACCATCGTGGGCGGCGTGGGGGCGCGCTCGTTTCTCCACAGCGAC
CCCATGGAGTGGATGGGCTGGAACGTTCTTCTCGAGGGCCGGAAGCTATG
GACGTTCCTGCCTCCATTGGCCGACCTGGATTCCTCTCTTGGAACCTACC
GCTTGGCCCCTAATGCCTTCGGCTCCCACAACGTCTCGGCGGGATGGCAG
AGCAACGTGGACCTCTACCAGCACGGAGCGGCCACGGCGTCTTGGCCGAC
AGCGGGAGAGGGGCAAGAGGTCATGCAGCACGCTGTCAGTGGAGTACAGA
AGGCGGGGGAACTTGTTCTTATTCCGCCTCGTCATTGGCACCAGGTATCT
GCTCGACGAGCACCTCCTCGACTTTCCACAAGCTCGCCCCGAACTCGGTG
CCCTGCTCGAGAAGCCGCAGAACCTCCTTGGGACAGACGAGTTTCAGCTT
TTCCCTCCTTCCGTCAGGCCCCAAAACCTGTGTACCATCGTGGGCGGCGT
GGGGGCGCGCTCGTTTCTCCACAGCGACCCCATGGAGTGGATGGGCTGGA
ACGTTCTTCTCGAGGGCCGGAAGCTATGGACGTTCCTGCCTCCATTGGCC
GACCTGGATTCCTCTCTTGGAACCTACCGCTTGGCCCCTAATGCCTTCGG
CTCCCACAACGTCTCGGCGGGATGGCAGAGCAACGTGGACCTCTACCAGC
ACGGAGCGGCCACGGCGTCTTGGCCGACAGCGGGAGAGGGGCAAGAGGTC
ATGCAGCACGCTGTCAGTGGAGTACAGAAGGCGGGGGAACTTGTTCTTAT
TCCGCCTCGTCATTGGCACCAGGTGTACCACCTCGAGCCGTCATTGGCAG
TCGCGTCGCAGTACATGGACTTTCGGGTACGAGATCGCGTGTTCCGACAC
ATGCTGGACTGGTGCGGGGCTTCCGACGACGTGCTTCTATCCTCCCGGTT
CGACGCTCTGGCGCCTCGCGACCAGATCAAGGAGGTGCTGAAGGTGGCGC
TCGTAGCACGTCACGGCCGAGAAAAGGGCCTGGAAGCCTTCGATGGCCTC
GACGACCCATATCATTGAGTGTACCACCTCGAGCCGTCATTGGCAGTCGC
GTCGCAGTACATGGACTTTCGGGTACGAGATCGCGTGTTCCGACACATGC
TGGACTGGTGCGGGGCTTCCGACGACGTGCTTCTATCCTCCCGGTTCGAC
GCTCTGGCGCCTCGCGACCAGATCAAGGAGGTGCTGAAGGTGGCGCTCGT
AGCACGTCACGGCCGAGAAAAGGGCCTGGAAGCCTTCGATGGCCTCGACG
ACCCATATCATTGA
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